Marc Lipsitch
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Epidemiologist in the United States
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(Suggest an Edit or Addition)According to Wikipedia, Marc Lipsitch is an American epidemiologist and Professor in the Department of Epidemiology at the Harvard T.H. Chan School of Public Health, where he is the Director of the Center for Communicable Disease Dynamics. He has worked on modeling the transmission of Coronavirus disease 2019 .
Marc Lipsitch's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Projecting the transmission dynamics of SARS-CoV-2 through the postpandemic period (2020) (2132)
- BNT162b2 mRNA Covid-19 Vaccine in a Nationwide Mass Vaccination Setting (2021) (1747)
- Transmission Dynamics and Control of Severe Acute Respiratory Syndrome (2003) (1473)
- Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China (2020) (1219)
- How generation intervals shape the relationship between growth rates and reproductive numbers (2007) (1150)
- Defining the Epidemiology of Covid-19 - Studies Needed. (2020) (1012)
- Covid-19 Breakthrough Infections in Vaccinated Health Care Workers (2021) (889)
- Serotype replacement in disease after pneumococcal vaccination (2011) (835)
- Negative Controls: A Tool for Detecting Confounding and Bias in Observational Studies (2010) (824)
- Transmissibility of 1918 pandemic influenza (2004) (819)
- Recognition of pneumolysin by Toll-like receptor 4 confers resistance to pneumococcal infection (2003) (761)
- Public health interventions and epidemic intensity during the 1918 influenza pandemic (2007) (651)
- Absolute Humidity and the Seasonal Onset of Influenza in the Continental United States (2010) (577)
- Safety of the BNT162b2 mRNA Covid-19 Vaccine in a Nationwide Setting (2021) (562)
- Effectiveness of a third dose of the BNT162b2 mRNA COVID-19 vaccine for preventing severe outcomes in Israel: an observational study (2021) (548)
- Evaluating treatment protocols to prevent antibiotic resistance. (1997) (475)
- Interleukin-17A Mediates Acquired Immunity to Pneumococcal Colonization (2008) (470)
- Antimicrobial Use and Antimicrobial Resistance: A Population Perspective (2002) (449)
- Antibiotics in agriculture and the risk to human health: how worried should we be? (2014) (398)
- The epidemiology of antibiotic resistance in hospitals: paradoxes and prescriptions. (2000) (393)
- Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection (2011) (386)
- Mycobacterium tuberculosis mutation rate estimates from different lineages predict substantial differences in the emergence of drug resistant tuberculosis (2013) (378)
- THE EVOLUTION OF VIRULENCE IN PATHOGENS WITH VERTICAL AND HORIZONTAL TRANSMISSION (1996) (364)
- Model-informed COVID-19 vaccine prioritization strategies by age and serostatus (2020) (364)
- Estimates of the Prevalence of Pandemic (H1N1) 2009, United States, April–July 2009 (2009) (358)
- CD4+ T cells mediate antibody-independent acquired immunity to pneumococcal colonization. (2005) (347)
- Population genomics of post-vaccine changes in pneumococcal epidemiology (2013) (339)
- Natural selection, infectious transfer and the existence conditions for bacterial plasmids. (2000) (339)
- The population genetics of antibiotic resistance. (1997) (338)
- Ecological theory suggests that antimicrobial cycling will not reduce antimicrobial resistance in hospitals. (2004) (335)
- Association of serotype with risk of death due to pneumococcal pneumonia: a meta-analysis. (2010) (332)
- Aggregated mobility data could help fight COVID-19 (2020) (331)
- The Severity of Pandemic H1N1 Influenza in the United States, from April to July 2009: A Bayesian Analysis (2009) (310)
- Virulence and transmissibility of pathogens: what is the relationship? (1997) (304)
- Continued Impact of Pneumococcal Conjugate Vaccine on Carriage in Young Children (2009) (300)
- Pneumococcal Capsular Polysaccharide Structure Predicts Serotype Prevalence (2009) (295)
- Viral Shedding and Clinical Illness in Naturally Acquired Influenza Virus Infections (2010) (288)
- Model-informed COVID-19 vaccine prioritization strategies by age and serostatus (2021) (280)
- Practical considerations for measuring the effective reproductive number, Rt (2020) (271)
- Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011 (2012) (270)
- Estimation of the reproductive number and the serial interval in early phase of the 2009 influenza A/H1N1 pandemic in the USA (2009) (268)
- Real-Time Influenza Forecasts during the 2012–2013 Season (2013) (268)
- Visualizing Pneumococcal Infections in the Lungs of Live Mice Using Bioluminescent Streptococcus pneumoniaeTransformed with a Novel Gram-Positive luxTransposon (2001) (264)
- Antibiotic resistance--the interplay between antibiotic use in animals and human beings. (2003) (262)
- Bacterial vaccines and serotype replacement: lessons from Haemophilus influenzae and prospects for Streptococcus pneumoniae. (1999) (259)
- Social distancing strategies for curbing the COVID-19 epidemic (2020) (250)
- The Effect of Parasites on Host Population Density and Extinction: Experimental Epidemiology with Daphnia and Six Microparasites (2000) (249)
- Vaccination against colonizing bacteria with multiple serotypes. (1997) (247)
- The population dynamics of vertically and horizontally transmitted parasites (1995) (245)
- The role of absolute humidity on transmission rates of the COVID-19 outbreak (2020) (236)
- Population biology, evolution, and infectious disease: convergence and synthesis. (1999) (231)
- The population dynamics of antimicrobial chemotherapy (1997) (228)
- Geographic diversity and temporal trends of antimicrobial resistance in Streptococcus pneumoniae in the United States (2003) (226)
- Antiviral Resistance and the Control of Pandemic Influenza (2007) (226)
- Influenza seasonality: Lifting the fog (2009) (220)
- Dual roles for DNA sequence identity and the mismatch repair system in the regulation of mitotic crossing-over in yeast. (1997) (219)
- Weather-based prediction of Plasmodium falciparum malaria in epidemic-prone regions of Ethiopia I. Patterns of lagged weather effects reflect biological mechanisms (2004) (218)
- Understanding the spread of antibiotic resistant pathogens in hospitals: mathematical models as tools for control. (2001) (211)
- Cross-reactive memory T cells and herd immunity to SARS-CoV-2 (2020) (207)
- Managing and reducing uncertainty in an emerging influenza pandemic. (2009) (199)
- Absolute humidity and pandemic versus epidemic influenza. (2011) (198)
- Risk of clinical sequelae after the acute phase of SARS-CoV-2 infection: retrospective cohort study (2021) (195)
- Interference between Streptococcus pneumoniae and Staphylococcus aureus: In Vitro Hydrogen Peroxide-Mediated Killing by Streptococcus pneumoniae (2006) (194)
- Human Challenge Studies to Accelerate Coronavirus Vaccine Licensure (2020) (193)
- The rise and fall of antimicrobial resistance. (2001) (190)
- Scientific consensus on the COVID-19 pandemic: we need to act now (2020) (185)
- Origin and Proliferation of Multiple-Drug Resistance in Bacterial Pathogens (2015) (185)
- Genomic epidemiology of Neisseria gonorrhoeae with reduced susceptibility to cefixime in the USA: a retrospective observational study (2014) (183)
- Potential Biases in Estimating Absolute and Relative Case-Fatality Risks during Outbreaks (2015) (183)
- Antibody-Independent, Interleukin-17A-Mediated, Cross-Serotype Immunity to Pneumococci in Mice Immunized Intranasally with the Cell Wall Polysaccharide (2006) (175)
- Intranasal Immunization with Killed Unencapsulated Whole Cells Prevents Colonization and Invasive Disease by Capsulated Pneumococci (2001) (174)
- Control-group selection importance in studies of antimicrobial resistance: examples applied to Pseudomonas aeruginosa, Enterococci, and Escherichia coli. (2002) (173)
- Genomic Epidemiology of Gonococcal Resistance to Extended-Spectrum Cephalosporins, Macrolides, and Fluoroquinolones in the United States, 2000–2013 (2016) (172)
- Inefficient Cytotoxic T Lymphocyte–Mediated Killing of HIV-1–Infected Cells In Vivo (2006) (171)
- On the effect of age on the transmission of SARS-CoV-2 in households, schools and the community (2020) (170)
- The analysis of hospital infection data using hidden Markov models. (2004) (166)
- Understanding COVID-19 vaccine efficacy (2020) (164)
- The severity of pandemic H1N1 influenza in the United States, April – July 2009 (2010) (164)
- Effectiveness of the BNT162b2 mRNA COVID-19 vaccine in pregnancy (2021) (162)
- Niche and Neutral Effects of Acquired Immunity Permit Coexistence of Pneumococcal Serotypes (2012) (161)
- How Can Vaccines Contribute to Solving the Antimicrobial Resistance Problem? (2016) (159)
- Practical considerations for measuring the effective reproductive number, Rt (2020) (159)
- Serum serotype-specific pneumococcal anticapsular immunoglobulin g concentrations after immunization with a 9-valent conjugate pneumococcal vaccine correlate with nasopharyngeal acquisition of pneumococcus. (2005) (157)
- Antibiotics in agriculture: When is it time to close the barn door? (2002) (155)
- Individual quarantine versus active monitoring of contacts for the mitigation of COVID-19: a modelling study (2020) (154)
- Optimizing infectious disease interventions during an emerging epidemic (2009) (149)
- Predicting the Epidemic Sizes of Influenza A/H1N1, A/H3N2, and B: A Statistical Method (2011) (148)
- Within-Host Bacterial Diversity Hinders Accurate Reconstruction of Transmission Networks from Genomic Distance Data (2014) (147)
- Competition among Streptococcus pneumoniae for intranasal colonization in a mouse model. (2000) (143)
- SARS-CoV-2 breakthrough infections in vaccinated individuals: measurement, causes and impact (2021) (143)
- No coexistence for free: neutral null models for multistrain pathogens. (2009) (142)
- Patterns of antigenic diversity and the mechanisms that maintain them (2007) (142)
- Diversity and antibiotic resistance among nonvaccine serotypes of Streptococcus pneumoniae carriage isolates in the post-heptavalent conjugate vaccine era. (2007) (141)
- Improving the Estimation of Influenza-Related Mortality Over a Seasonal Baseline (2012) (140)
- Reopening Primary Schools during the Pandemic. (2020) (137)
- Beneficial and perverse effects of isoniazid preventive therapy for latent tuberculosis infection in HIV-tuberculosis coinfected populations. (2006) (135)
- Fourth Dose of BNT162b2 mRNA Covid-19 Vaccine in a Nationwide Setting (2022) (134)
- Inference of seasonal and pandemic influenza transmission dynamics (2015) (133)
- Secular trends in Helicobacter pylori seroprevalence in adults in the United States: evidence for sustained race/ethnic disparities. (2012) (132)
- Are Anticapsular Antibodies the Primary Mechanism of Protection against Invasive Pneumococcal Disease? (2005) (132)
- On the Effect of Age on the Transmission of SARS-CoV-2 in Households, Schools, and the Community (2020) (132)
- Age- and Serogroup-Related Differences in Observed Durations of Nasopharyngeal Carriage of Penicillin-Resistant Pneumococci (2007) (131)
- Improving the evidence base for decision making during a pandemic: the example of 2009 influenza A/H1N1. (2011) (128)
- Epidemiologic evidence for serotype-specific acquired immunity to pneumococcal carriage. (2008) (126)
- Measuring and interpreting associations between antibiotic use and penicillin resistance in Streptococcus pneumoniae. (2001) (125)
- Population dynamics of tuberculosis treatment: mathematical models of the roles of non-compliance and bacterial heterogeneity in the evolution of drug resistance. (1998) (125)
- Serotype specific invasive capacity and persistent reduction in invasive pneumococcal disease. (2010) (123)
- Concentration-Dependent Selection of Small Phenotypic Differences in TEM β-Lactamase-Mediated Antibiotic Resistance (2000) (122)
- Enhancing disease surveillance with novel data streams: challenges and opportunities (2015) (119)
- Age- and sex-related risk factors for influenza-associated mortality in the United States between 1997-2007. (2014) (118)
- Clinical outcomes associated with SARS-CoV-2 Omicron (B.1.1.529) variant and BA.1/BA.1.1 or BA.2 subvariant infection in Southern California (2022) (115)
- Oseltamivir and risk of lower respiratory tract complications in patients with flu symptoms: a meta-analysis of eleven randomized clinical trials. (2011) (114)
- Estimating the proportion of bystander selection for antibiotic resistance among potentially pathogenic bacterial flora (2018) (113)
- Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage (2017) (112)
- SpxB Is a Suicide Gene of Streptococcus pneumoniae and Confers a Selective Advantage in an In Vivo Competitive Colonization Model (2007) (110)
- The distribution of antibiotic use and its association with antibiotic resistance (2018) (108)
- On the relative role of different age groups in influenza epidemics. (2015) (107)
- Frequency-dependent selection in vaccine-associated pneumococcal population dynamics (2017) (107)
- The Prevalence and Risk Factors for Pneumococcal Colonization of the Nasopharynx among Children in Kilifi District, Kenya (2012) (106)
- The evolution of virulence in sexually transmitted HIV/AIDS. (1995) (106)
- Seasonality of antibiotic-resistant streptococcus pneumoniae that causes acute otitis media: a clue for an antibiotic-restriction policy? (2008) (104)
- Antibody-Independent, CD4+ T-Cell-Dependent Protection against Pneumococcal Colonization Elicited by Intranasal Immunization with Purified Pneumococcal Proteins (2007) (103)
- Projected benefits of active surveillance for vancomycin-resistant enterococci in intensive care units. (2004) (102)
- Preprints: An underutilized mechanism to accelerate outbreak science (2018) (101)
- Estimating epidemiologic dynamics from cross-sectional viral load distributions (2020) (101)
- Vaccine production, distribution, access, and uptake (2011) (101)
- Clinical outcomes among patients infected with Omicron (B.1.1.529) SARS-CoV-2 variant in southern California (2022) (100)
- Impact of more than a decade of pneumococcal conjugate vaccine use on carriage and invasive potential in Native American communities. (2012) (98)
- Correction: Absolute Humidity and the Seasonal Onset of Influenza in the Continental United States (2010) (97)
- Association of the Pneumococcal Pilus with Certain Capsular Serotypes but Not with Increased Virulence (2007) (96)
- Estimated Demand for US Hospital Inpatient and Intensive Care Unit Beds for Patients With COVID-19 Based on Comparisons With Wuhan and Guangzhou, China (2020) (95)
- Generation interval contraction and epidemic data analysis. (2007) (95)
- Weather-based prediction of Plasmodium falciparum malaria in epidemic-prone regions of Ethiopia II. Weather-based prediction systems perform comparably to early detection systems in identifying times for interventions (2004) (95)
- Observational studies and the difficult quest for causality: lessons from vaccine effectiveness and impact studies. (2016) (94)
- How to maintain surveillance for novel influenza A H1N1 when there are too many cases to count (2009) (92)
- Ethical Alternatives to Experiments with Novel Potential Pandemic Pathogens (2014) (91)
- Decreased infectivity following BNT162b2 vaccination: A prospective cohort study in Israel (2021) (91)
- Estimating Rates of Carriage Acquisition and Clearance and Competitive Ability for Pneumococcal Serotypes in Kenya With a Markov Transition Model (2012) (90)
- Reconstructing influenza incidence by deconvolution of daily mortality time series (2009) (90)
- Concerns about SARS-CoV-2 evolution should not hold back efforts to expand vaccination (2021) (90)
- Changes in severity of 2009 pandemic A/H1N1 influenza in England: a Bayesian evidence synthesis (2011) (90)
- Construction of Otherwise Isogenic Serotype 6B, 7F, 14, and 19F Capsular Variants of Streptococcus pneumoniae Strain TIGR4 (2003) (90)
- Rates of Acquisition and Clearance of Pneumococcal Serotypes in the Nasopharynges of Children in Kilifi District, Kenya (2012) (89)
- Protection against Nasopharyngeal Colonization by Streptococcus pneumoniae Is Mediated by Antigen-Specific CD4+ T Cells (2008) (88)
- Epidemiologic data and pathogen genome sequences: a powerful synergy for public health (2014) (88)
- Investigate the origins of COVID-19 (2021) (88)
- Studies Needed to Address Public Health Challenges of the 2009 H1N1 Influenza Pandemic: Insights from Modeling (2010) (88)
- HOST POPULATION STRUCTURE AND THE EVOLUTION OF VIRULENCE: A “LAW OF DIMINISHING RETURNS” (1995) (87)
- Hedging against Antiviral Resistance during the Next Influenza Pandemic Using Small Stockpiles of an Alternative Chemotherapy (2009) (86)
- Measurement of Vaccine Direct Effects Under the Test-Negative Design. (2018) (82)
- STAMP: Sequence tag-based analysis of microbial population dynamics (2014) (82)
- Evaluation of post-introduction COVID-19 vaccine effectiveness: Summary of interim guidance of the World Health Organization (2021) (79)
- What is the mechanism for persistent coexistence of drug-susceptible and drug-resistant strains of Streptococcus pneumoniae? (2009) (78)
- The use of test-negative controls to monitor vaccine effectiveness: a systematic review of methodology. (2019) (78)
- Nowcasting by Bayesian Smoothing: A flexible, generalizable model for real-time epidemic tracking (2019) (77)
- Comparative Genomics of Recent Shiga Toxin-Producing Escherichia coli O104:H4: Short-Term Evolution of an Emerging Pathogen (2013) (77)
- Impaired Innate and Adaptive Immunity to Streptococcus pneumoniae and Its Effect on Colonization in an Infant Mouse Model (2009) (77)
- Pneumococcal Carriage and Antibiotic Resistance in Young Children Before 13-valent Conjugate Vaccine (2012) (77)
- The demand for inpatient and ICU beds for COVID-19 in the US: lessons from Chinese cities (2020) (77)
- Streptococcus pneumoniae Capsular Serotype Invasiveness Correlates with the Degree of Factor H Binding and Opsonization with C3b/iC3b (2012) (77)
- Selective and Genetic Constraints on Pneumococcal Serotype Switching (2015) (76)
- Viral factors in influenza pandemic risk assessment (2016) (76)
- Using predicted imports of 2019-nCoV cases to determine locations that may not be identifying all imported cases (2020) (76)
- Quantifying bias of COVID-19 prevalence and severity estimates in Wuhan, China that depend on reported cases in international travelers (2020) (75)
- Fractional Dosing of Yellow Fever Vaccine to Extend Supply: A Modeling Study (2016) (74)
- Avian polygyny is most likely in populations with high variability in heritable male fitness (1994) (74)
- Shared Genomic Variants: Identification of Transmission Routes Using Pathogen Deep-Sequence Data (2017) (73)
- Modeling community- and individual-level effects of child-care center attendance on pneumococcal carriage. (2005) (73)
- Antibodies to Conserved Pneumococcal Antigens Correlate with, but Are Not Required for, Protection against Pneumococcal Colonization Induced by Prior Exposure in a Mouse Model (2005) (72)
- Re-emergence of the type 1 pilus among Streptococcus pneumoniae isolates in Massachusetts, USA. (2010) (72)
- Strain characteristics of Streptococcus pneumoniae carriage and invasive disease isolates during a cluster-randomized clinical trial of the 7-valent pneumococcal conjugate vaccine. (2007) (69)
- Cholera Modeling: Challenges to Quantitative Analysis and Predicting the Impact of Interventions (2012) (69)
- Effectiveness of BNT162b2 Vaccine against Delta Variant in Adolescents (2021) (69)
- Interpreting results from trials of pneumococcal conjugate vaccines: a statistical test for detecting vaccine-induced increases in carriage of nonvaccine serotypes. (2000) (68)
- Quantifying Interhospital Patient Sharing as a Mechanism for Infectious Disease Spread (2010) (67)
- How to detect and reduce potential sources of biases in studies of SARS-CoV-2 and COVID-19 (2021) (67)
- Estimating Incidence Curves of Several Infections Using Symptom Surveillance Data (2011) (67)
- Virulence and transmission modes of two microsporidia in Daphnia magna (1995) (66)
- Toward economic evaluation of the value of vaccines and other health technologies in addressing AMR (2018) (64)
- Carried Pneumococci in Massachusetts Children: The Contribution of Clonal Expansion and Serotype Switching (2011) (64)
- Interpreting vaccine efficacy trial results for infection and transmission (2021) (63)
- Projection of the Future Dimensions and Costs of the Genital Herpes Simplex Type 2 Epidemic in the United States (2002) (62)
- Epidemiology and risk factors for Staphylococcus aureus colonization in children in the post-PCV7 era (2009) (62)
- Infections, hospitalisations, and deaths averted via a nationwide vaccination campaign using the Pfizer–BioNTech BNT162b2 mRNA COVID-19 vaccine in Israel: a retrospective surveillance study (2021) (62)
- Absolute Humidity and the Seasonal Onset of Influenza in the Continental US (2009) (62)
- Risk of persistent and new clinical sequelae among adults aged 65 years and older during the post-acute phase of SARS-CoV-2 infection: retrospective cohort study (2022) (61)
- Estimating case fatality rates of COVID-19 (2020) (61)
- Using observational data to quantify bias of traveller-derived COVID-19 prevalence estimates in Wuhan, China (2020) (61)
- Simulations for designing and interpreting intervention trials in infectious diseases (2017) (61)
- A Missing Dimension in Measures of Vaccination Impacts (2014) (61)
- Reproductive numbers, epidemic spread and control in a community of households. (2009) (60)
- The effect of antiretroviral therapy on secondary transmission of HIV among men who have sex with men. (2007) (59)
- Microbiome as a tool and a target in the effort to address antimicrobial resistance (2018) (58)
- Trends in outpatient antibiotic use and prescribing practice among US older adults, 2011-15: observational study (2018) (57)
- Estimating epidemiologic dynamics from cross-sectional viral load distributions (2021) (57)
- Using pneumococcal carriage data to monitor postvaccination changes in invasive disease. (2013) (57)
- Surface Charge of Streptococcus pneumoniae Predicts Serotype Distribution (2013) (57)
- Incremental increase in fitness cost with increased beta -lactam resistance in pneumococci evaluated by competition in an infant rat nasal colonization model. (2006) (57)
- Pandemic Influenza: Risk of Multiple Introductions and the Need to Prepare for Them (2006) (57)
- Diverse evolutionary patterns of pneumococcal antigens identified by pangenome-wide immunological screening (2017) (57)
- Mechanisms by which antibiotics promote dissemination of resistant pneumococci in human populations. (2006) (57)
- Factors Related to Increasing Prevalence of Resistance to Ciprofloxacin and Other Antimicrobial Drugs in Neisseria gonorrhoeae, United States (2012) (55)
- Temporal rise in the proportion of younger adults and older adolescents among coronavirus disease (COVID-19) cases following the introduction of physical distancing measures, Germany, March to April 2020 (2020) (55)
- Is methicillin-resistant Staphylococcus aureus replacing methicillin-susceptible S. aureus? (2011) (55)
- The pneumococcal pilus predicts the absence of Staphylococcus aureus co-colonization in pneumococcal carriers. (2009) (55)
- Single-Step Capsular Transformation and Acquisition of Penicillin Resistance in Streptococcus pneumoniae (2004) (55)
- Mathematical models of parasite responses to host immune defences (1997) (55)
- The population genetics of antibiotic resistance. II: Analytic theory for sustained populations of bacteria in a community of hosts. (1998) (54)
- Distribution of vaccine/antivirals and the ‘least spread line’ in a stratified population (2010) (54)
- Population impact of SARS-CoV-2 variants with enhanced transmissibility and/or partial immune escape (2021) (53)
- Alert Threshold Algorithms and Malaria Epidemic Detection (2004) (53)
- Population genomic datasets describing the post-vaccine evolutionary epidemiology of Streptococcus pneumoniae (2015) (52)
- Gain-of-function experiments: time for a real debate (2014) (50)
- Historical intensity of natural selection for resistance to tuberculosis. (2002) (50)
- Within-Host Whole-Genome Deep Sequencing and Diversity Analysis of Human Respiratory Syncytial Virus Infection Reveals Dynamics of Genomic Diversity in the Absence and Presence of Immune Pressure (2014) (50)
- Effect of human leukocyte antigen heterozygosity on infectious disease outcome: The need for allele-specific measures (2003) (49)
- Upgrading antibiotic use within a class: tradeoff between resistance and treatment success. (2006) (49)
- The Distribution of Pairwise Genetic Distances: A Tool for Investigating Disease Transmission (2014) (48)
- Antibody testing will enhance the power and accuracy of COVID-19-prevention trials (2020) (48)
- Estimating Variability in the Transmission of Severe Acute Respiratory Syndrome to Household Contacts in Hong Kong, China (2007) (48)
- On the evolutionary ecology of multidrug resistance in bacteria (2019) (48)
- Weak Epistasis May Drive Adaptation in Recombining Bacteria (2017) (48)
- Improving pandemic influenza risk assessment (2014) (47)
- Student Behavior during a School Closure Caused by Pandemic Influenza A/H1N1 (2010) (47)
- Moratorium on Research Intended To Create Novel Potential Pandemic Pathogens (2014) (46)
- Distinct Effects on Diversifying Selection by Two Mechanisms of Immunity against Streptococcus pneumoniae (2012) (46)
- Systematic analysis of protein identity between Zika virus and other arthropod-borne viruses (2016) (45)
- Macrolide and Nonmacrolide Resistance with Mass Azithromycin Distribution. (2020) (44)
- Oseltamivir for treatment and prevention of pandemic influenza A/H1N1 virus infection in households, Milwaukee, 2009 (2010) (44)
- Age-Specific Immunoglobulin G (IgG) and IgA to Pneumococcal Protein Antigens in a Population in Coastal Kenya (2004) (43)
- Shortcomings of Vitamin D-Based Model Simulations of Seasonal Influenza (2011) (43)
- Comparative Impact of Individual Quarantine vs. Active Monitoring of Contacts for the Mitigation of COVID-19: a modelling study (2020) (43)
- Predictors of indoor absolute humidity and estimated effects on influenza virus survival in grade schools (2013) (42)
- Estimating the hospitalization burden associated with influenza and respiratory syncytial virus in New York City, 2003–2011 (2015) (42)
- The evolution of antibiotic resistance in a structured host population (2018) (42)
- Clonal replacement among 19A Streptococcus pneumoniae in Massachusetts, prior to 13 valent conjugate vaccination. (2011) (42)
- A Modified Janus Cassette (Sweet Janus) to Improve Allelic Replacement Efficiency by High-Stringency Negative Selection in Streptococcus pneumoniae (2014) (42)
- Effect of Serotype on Pneumococcal Competition in a Mouse Colonization Model (2015) (41)
- The role of complement in innate and adaptive immunity to pneumococcal colonization and sepsis in a murine model. (2010) (41)
- Apparent declining efficacy in randomized trials: examples of the Thai RV144 HIV vaccine and South African CAPRISA 004 microbicide trials. (2012) (40)
- Pathogen Diversity and Hidden Regimes of Apparent Competition (2012) (40)
- Comment on “Seroevidence for H5N1 Influenza Infections in Humans: Meta-Analysis” (2012) (40)
- BNT162b2 Vaccine Effectiveness against Omicron in Children 5 to 11 Years of Age (2022) (39)
- The Association of Meningococcal Disease with Influenza in the United States, 1989–2009 (2014) (38)
- Geographic and temporal trends in antimicrobial nonsusceptibility in Streptococcus pneumoniae in the post-vaccine era in the United States. (2013) (38)
- Little Evidence for Genetic Susceptibility to Influenza A (H5N1) from Family Clustering Data (2007) (38)
- Challenges of vaccine effectiveness and waning studies. (2018) (38)
- Identifying Locations with Possible Undetected Imported Severe Acute Respiratory Syndrome Coronavirus 2 Cases by Using Importation Predictions (2020) (37)
- Carriage burden, multiple colonization and antibiotic pressure promote emergence of resistant vaccine escape pneumococci (2015) (37)
- Leveraging Vaccines to Reduce Antibiotic Use and Prevent Antimicrobial Resistance: A World Health Organization Action Framework (2021) (37)
- Use of Cumulative Incidence of Novel Influenza A/H1N1 in Foreign Travelers to Estimate Lower Bounds on Cumulative Incidence in Mexico (2009) (37)
- Multiple equilibria: tuberculosis transmission require unrealistic assumptions. (2003) (37)
- Evolution, Safety, and Highly Pathogenic Influenza Viruses (2012) (37)
- Mathematical modelling for antibiotic resistance control policy: do we know enough? (2019) (37)
- The El Niño–Southern Oscillation (ENSO)–pandemic Influenza connection: Coincident or causal? (2012) (36)
- Searching for Sharp Drops in the Incidence of Pandemic A/H1N1 Influenza by Single Year of Age (2012) (36)
- Estimating underdetection of internationally imported COVID-19 cases (2020) (36)
- Serotype replacement in disease following pneumococcal vaccination : A discussion of the evidence (2012) (36)
- Temporally Varying Relative Risks for Infectious Diseases: Implications for Infectious Disease Control. (2017) (35)
- Hospitalization and Emergency Department Encounters for COVID-19 After Paxlovid Treatment - California, December 2021-May 2022. (2022) (34)
- Identifying and alleviating bias due to differential depletion of susceptible people in post-marketing evaluations of COVID-19 vaccines (2021) (34)
- Resistance to antimicrobial chemotherapy: a prescription for research and action. (1998) (34)
- On the Relative Role of Different Age Groups During Epidemics Associated With Respiratory Syncytial Virus (2017) (34)
- Rethinking Biosafety in Research on Potential Pandemic Pathogens (2012) (33)
- Adaptation on Rugged Landscapes Generated by Iterated Local Interactions of Neighboring Genes (1991) (33)
- Azithromycin Susceptibility Among Neisseria gonorrhoeae Isolates and Seasonal Macrolide Use (2018) (33)
- Improving Control of Antibiotic-Resistant Gonorrhea by Integrating Research Agendas Across Disciplines: Key Questions Arising From Mathematical Modeling. (2016) (33)
- Host population structure and treatment frequency maintain balancing selection on drug resistance (2017) (33)
- Vaccine Effects on Heterogeneity in Susceptibility and Implications for Population Health Management (2017) (32)
- Serum antipneumococcal antibodies and pneumococcal colonization in adults with chronic obstructive pulmonary disease. (2007) (31)
- Choices in vaccine trial design in epidemics of emerging infections (2018) (31)
- Prediction of Serotypes Causing Invasive Pneumococcal Disease in Unvaccinated and Vaccinated Populations (2011) (31)
- Time from Illness Onset to Death, 1918 Influenza and Pneumococcal Pneumonia (2009) (30)
- Quantifying Child Mortality Reductions Related to Measles Vaccination (2010) (30)
- Antimicrobial resistance prevalence, rates of hospitalization with septicemia and rates of mortality with sepsis in adults in different US states. (2019) (30)
- Within-Host Selection Is Limited by an Effective Population of Streptococcus pneumoniae during Nasopharyngeal Colonization (2013) (29)
- Association Between Congenital Cytomegalovirus and the Prevalence at Birth of Microcephaly in the United States. (2020) (29)
- Stability of the pneumococcal population structure in Massachusetts as PCV13 was introduced (2015) (29)
- Immunization, Antibiotic Use, and Pneumococcal Colonization Over a 15-Year Period (2017) (29)
- The Ethics of Continuing Placebo in SARS-CoV-2 Vaccine Trials. (2020) (28)
- Targeting Imperfect Vaccines against Drug-Resistance Determinants: A Strategy for Countering the Rise of Drug Resistance (2013) (28)
- Utilizing syndromic surveillance data for estimating levels of influenza circulation. (2014) (27)
- Resistance diagnostics as a public health tool to combat antibiotic resistance: A model-based evaluation (2018) (27)
- Enhancing Situational Awareness to Prevent Infectious Disease Outbreaks from Becoming Catastrophic. (2019) (27)
- Indirect protection of children from SARS-CoV-2 infection through parental vaccination (2022) (27)
- Changing the Ecology of Pneumococci with Antibiotics and Vaccines (2004) (26)
- Effects of Antiviral Usage on Transmission Dynamics of Herpes Simplex Virus Type 1 and on Antiviral Resistance: Predictions of Mathematical Models (2000) (25)
- Infective endocarditis and cancer in the elderly (2015) (25)
- Broad Conditions Favor the Evolution of Phase-Variable Loci (2013) (24)
- Patient sharing and population genetic structure of methicillin-resistant Staphylococcus aureus (2012) (24)
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- Modeling the Comparative Impact of Individual Quarantine vs. Active Monitoring of Contacts for the Mitigation of COVID-19 (2020) (23)
- Pan-serotype Reduction in Progression of Streptococcus pneumoniae to Otitis Media After Rollout of Pneumococcal Conjugate Vaccines (2017) (23)
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- Improving vaccine trials in infectious disease emergencies (2017) (22)
- Development, Calibration and Performance of an HIV Transmission Model Incorporating Natural History and Behavioral Patterns: Application in South Africa (2014) (22)
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- Estimating the contribution of different age strata to vaccine serotype pneumococcal transmission in the pre vaccine era: a modelling study (2020) (19)
- How could preventive therapy affect the prevalence of drug resistance? Causes and consequences (2015) (19)
- In Vitro Bactericidal Activity of Streptococcus pneumoniae and Bactericidal Susceptibility of Staphylococcus aureus Strains Isolated from Cocolonized versus Noncocolonized Children (2007) (18)
- Novel methods for the analysis of stepped wedge cluster randomized trials (2019) (18)
- The Relative Impact of Community and Hospital Antibiotic Use on the Selection of Extended-spectrum Beta-lactamase-producing Escherichia coli. (2018) (18)
- Exploring the role of competition induced by non-vaccine serotypes for herd protection following pneumococcal vaccination (2017) (18)
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- Exploring the relationship between incidence and the average age of infection during seasonal epidemics. (2009) (17)
- Modelling seasonal variations in the age and incidence of Kawasaki disease to explore possible infectious aetiologies (2012) (17)
- Competing effects of indirect protection and clustering on the power of cluster-randomized controlled vaccine trials (2017) (17)
- Analyzing Vaccine Trials in Epidemics With Mild and Asymptomatic Infection (2018) (17)
- Case-based surveillance of antimicrobial resistance with full susceptibility profiles (2019) (17)
- Shared genomic variants: identification of transmission routes using pathogen deep sequence data (2015) (17)
- Identification of pneumococcal colonization determinants in the stringent response pathway facilitated by genomic diversity (2015) (16)
- Nowcasting for Real-Time COVID-19 Tracking in New York City: An Evaluation Using Reportable Disease Data From Early in the Pandemic (2020) (16)
- Addendum: Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China (2020) (15)
- Hospitalizations associated with respiratory syncytial virus (RSV) and influenza in children, including children diagnosed with asthma. (2019) (15)
- Does pneumococcal conjugate vaccine influence Staphylococcus aureus carriage in children? (2008) (15)
- In Vitro Selection of Neisseria gonorrhoeae Mutants with Elevated MIC Values and Increased Resistance to Cephalosporins (2014) (15)
- If a Global Catastrophic Biological Risk Materializes, at What Stage Will We Recognize It? (2017) (15)
- Estimating internationally imported cases during the early COVID-19 pandemic (2021) (15)
- The within-host population dynamics of antibacterial chemotherapy: conditions for the evolution of resistance. (2007) (15)
- Ebola and beyond (2015) (15)
- Burden of Antimicrobial Resistance: Compared to What? (2021) (14)
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- Impact of Antimicrobial Treatment for Acute Otitis Media on Carriage Dynamics of Penicillin-Susceptible and Penicillin-Nonsusceptible Streptococcus pneumoniae (2018) (14)
- Decreased Infectivity Following BNT162b2 Vaccination (2021) (14)
- Effectiveness of BNT162b2 mRNA COVID-19 vaccine against SARS-CoV-2 variant Beta (B.1.351) among persons identified through contact tracing in Israel: A prospective cohort study (2021) (14)
- Modeling the impact of racial and ethnic disparities on COVID-19 epidemic dynamics (2021) (13)
- Reply to “Studies on Influenza Virus Transmission between Ferrets: the Public Health Risks Revisited” (2015) (13)
- Modeling of antibiotic resistance in the ICU - US Slant (2002) (13)
- Can the Heterosexual HIV Epidemic be Eliminated in South Africa Using Combination Prevention? A Modeling Analysis. (2016) (13)
- Estimating the number of undetected COVID-19 cases exported internationally from all of China (2020) (13)
- Population genomics of pneumococcal carriage in Massachusetts children following introduction of PCV-13 (2019) (13)
- Vaccine testing for emerging infections: the case for individual randomisation (2017) (13)
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- Negative frequency-dependent selection and asymmetrical transformation stabilise multi-strain bacterial population structures (2020) (12)
- Estimating the cumulative incidence of COVID-19 in the United States using influenza surveillance, virologic testing, and mortality data: Four complementary approaches (2021) (12)
- Negative Control Exposures in Epidemiologic Studies (2012) (12)
- Can antibiotic resistance be reduced by vaccinating against respiratory disease? (2018) (12)
- SARS-CoV-2 infection and risk of clinical sequelae during the post-acute phase: a retrospective cohort study (2021) (11)
- Multidrug-resistant Neisseria gonorrhoeae: implications for future treatment strategies. (2018) (11)
- Antiviral usage for H1N1 treatment: pros, cons and an argument for broader prescribing guidelines in the United States (2009) (11)
- Why Do Exceptionally Dangerous Gain-of-Function Experiments in Influenza? (2018) (11)
- Frequency-dependent selection can forecast evolution in Streptococcus pneumoniae (2020) (11)
- Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in Streptococcus pneumoniae (2019) (11)
- Can Limited Scientific Value of Potential Pandemic Pathogen Experiments Justify the Risks? (2014) (10)
- Vaccine allocation in a declining epidemic (2012) (10)
- Pandemic flu: we are not prepared. (2005) (10)
- Modelling the epidemiologic impact of achieving UNAIDS fast-track 90-90-90 and 95-95-95 targets in South Africa (2019) (10)
- Lockdown measures and relative changes in the age-specific incidence of SARS-CoV-2 in Spain (2020) (10)
- Avian influenza: Ferret H7N9 flu model questioned (2013) (10)
- Big data and simple models used to track the spread of COVID-19 in cities (2020) (10)
- Testing COVID-19 therapies to prevent progression of mild disease (2020) (10)
- Surveillance to maintain the sensitivity of genotype-based antibiotic resistance diagnostics (2019) (9)
- Estimating Vaccine Efficacy Against Transmission via Effect on Viral Load (2021) (9)
- The severity of pandemic H1N1 influenza in the United States, April -- July 2009. (2009) (9)
- Potential biases arising from epidemic dynamics in observational seroprotection studies (2020) (9)
- Potential Benefits of a Serodiagnostic Test for Herpes Simplex Virus Type 1 (HSV-1) to Prevent Neonatal HSV-1 Infection (2002) (9)
- Bacterial Population Genetics and Disease (2001) (9)
- Estimating the proportion of bystander selection for antibiotic resistance in the US (2018) (9)
- Serotype-specific immune responses to pneumococcal conjugate vaccine among children are significantly correlated by individual: Analysis of randomized controlled trial data. (2018) (9)
- Prediction of post-vaccine population structure of Streptococcus pneumoniae using accessory gene frequencies (2018) (8)
- Comment on Pan A, Liu L, Wang C, et al., "Association of Public Health Interventions With the Epidemiology of the COVID-19 Outbreak in Wuhan, China," JAMA, Published online April 10, 2020, doi:10.1001/jama.2020.6130. (2020) (8)
- Levels of prescribing for four major antibiotic classes and rates of septicemia hospitalization in different US states (2018) (8)
- Temporal rise in the proportion of both younger adults and older adolescents among COVID-19 cases in Germany: evidence of lesser adherence to social distancing practices? (2020) (8)
- Response to Cioffi. (2020) (8)
- Pre‐dispensing of antivirals to high‐risk individuals in an influenza pandemic (2010) (8)
- TRANSMISSION RATES AND HIV VIRULENCE: COMMENTS TO MASSAD (1997) (8)
- Measurement of vaccine direct effects under the test-negative design (2018) (8)
- Modeling of Antibiotic Resistance in the ICU (2001) (8)
- Absolute humidity and the seasonal onset of influenza in the continental US. (2009) (8)
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- Predicting evolution using frequency-dependent selection in bacterial populations (2018) (7)
- Determinants of Staphylococcus aureus carriage in the developing infant nasal microbiome (2020) (7)
- Impact of stochastically generated heterogeneity in hazard rates on individually randomized vaccine efficacy trials (2018) (7)
- Predispensing of Antivirals to High-Risk Individuals in an Influenza Pandemic (2009) (7)
- Using Genetic Distance from Archived Samples for the Prediction of Antibiotic Resistance in Escherichia coli (2020) (7)
- How to detect and reduce potential sources of biases in epidemiologic studies of SARS-CoV-2 (2020) (7)
- Potential impact of outpatient stewardship interventions on antibiotic exposures of common bacterial pathogens (2020) (7)
- Adaptive Dynamics of Infectious Diseases: Vaccination and Serotype Replacement (2002) (7)
- How to Test Severe Acute Respiratory Syndrome Coronavirus 2 Vaccines Ethically Even After One Is Available (2021) (7)
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- Too little of a good thing: a paradox of moderate infection control. (2008) (6)
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- Infectious Diseases Society of America and Gain-of-Function Experiments With Pathogens Having Pandemic Potential (2015) (6)
- Herd immunity alters the conditions for performing dose schedule comparisons: an individual-based model of pneumococcal carriage (2018) (6)
- Use of an individual-based model of pneumococcal carriage for planning a randomized trial of a whole-cell vaccine (2018) (6)
- The severity of pandemic H1N1 influenza in the United States, April - July 2009. (2009) (6)
- Mechanisms that maintain coexistence of antibiotic sensitivity and resistance also promote high frequencies of multidrug resistance (2017) (6)
- Regulating impact on bystanders in clinical trials: An unsettled frontier (2019) (6)
- Near real-time surveillance of the SARS-CoV-2 epidemic with incomplete data (2021) (6)
- Understanding Australia's influenza pandemic policy on the strategic use of the antiviral drug stockpile (2009) (6)
- A new approach to the analysis of antibiotic resistance data from hospitals. (2014) (6)
- Ethics of Rationing the Flu Vaccine (2005) (6)
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- Microbiology. Bacterial population genetics and disease. (2001) (5)
- Quantifying biases in test-negative studies of vaccine effectiveness (2017) (5)
- Impact of Host Heterogeneity on the Efficacy of Interventions to Reduce Staphylococcus aureus Carriage (2015) (5)
- Title Diversity and Antibiotic Resistance among Nonvaccine Serotypes of Streptococcus pneumoniae Carriage Isolates in the Post – Heptavalent Conjugate Vaccine (2007) (5)
- Testing SARS-CoV-2 vaccine efficacy through deliberate natural viral exposure (2021) (5)
- Underprotection of Unpredictable Statistical Lives Compared to Predictable Ones (2017) (5)
- Adaptation on Rugged Landscapes Generated by Local Interactions of Neighboring Genes (5)
- SARS-CoV-2 breakthrough infections in vaccinated individuals: measurement, causes and impact (2021) (5)
- Assessing the feasibility of Nipah vaccine efficacy trials based on previous outbreaks in Bangladesh (2020) (4)
- Leveraging Pathogen Sequence and Contact Tracing Data to Enhance Vaccine Trials in Emerging Epidemics (2020) (4)
- Near real-time surveillance of the SARS-CoV-2 epidemic with incomplete data (2022) (4)
- Outpatient prescribing of four major antibiotic classes and prevalence of antimicrobial resistance in US adults (2018) (4)
- Deep-sequence phylogenetics to quantify patterns of HIV transmission in the context of a universal testing and treatment trial – BCPP/ Ya Tsie trial (2021) (4)
- Influenza A Hemagglutinin Passage Bias Sites and Host Specificity Mutations (2019) (4)
- H1N1 vaccination and adults with underlying health conditions in the US (2009) (4)
- Statistical Properties of Stepped Wedge Cluster-Randomized Trials in Infectious Disease Outbreaks (2020) (4)
- Analysis of multiple bacterial species and antibiotic classes reveals large variation in the association between seasonal antibiotic use and resistance (2022) (4)
- Population effect of influenza vaccination under co-circulation of non-vaccine variants and the case for a bivalent A/H3N2 vaccine component. (2017) (4)
- Outpatient antibiotic prescribing and demographic factors associated with state-level septicemia mortality rates in US adults (2018) (4)
- The relation between prescribing of different antibiotics and rates of mortality with sepsis in US adults (2020) (4)
- Levels of outpatient prescribing for four major antibiotic classes and rates of septicemia hospitalization in adults in different US states - a statistical analysis (2019) (4)
- Infectious disease dynamics and restrictions on social gathering size (2022) (4)
- Interaction Patterns of Men Who Have Sex With Men on a Geosocial Networking Mobile App in Seven United States Metropolitan Areas: Observational Study (2019) (4)
- Proposed Changes to U.S. Policy on Potential Pandemic Pathogen Oversight and Implementation (2020) (3)
- Global burden of antimicrobial resistance (2022) (3)
- Mission, Organization, and Future Direction of the Serological Sciences Network for COVID-19 (SeroNet) Epidemiologic Cohort Studies (2022) (3)
- Potential Biases Arising From Epidemic Dynamics in Observational Seroprotection Studies (2020) (3)
- Multiple Outbreaks and Flu Containment Plans (2006) (3)
- Temporally Varying Relative Risks for Infectious Diseases (2016) (3)
- Trends in outpatient antibiotic prescribing practice among US older adults, 2011-2015: an observational study (2018) (3)
- On the Role of Different Age Groups and Pertussis Vaccines During the 2012 Outbreak in Wisconsin (2018) (3)
- On the role of different age groups during pertussis epidemics in California, 2010 and 2014 (2018) (3)
- Big data and simple models to track COVID-19 (2020) (3)
- Comment on: 'Antibiotic footprint' as a communication tool to aid reduction of antibiotic consumption. (2019) (3)
- Statistical Properties of Stepped Wedge Cluster-Randomized Trials in Infectious Disease Outbreaks. (2020) (3)
- Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany (2012) (3)
- Acute Respiratory Syndrome Transmission Dynamics and Control of Severe (2010) (3)
- Calls for Caution in Genome Engineering Should Be a Model for Similar Dialogue on Pandemic Pathogen Research (2015) (3)
- Serotype replacement after pneumococcal vaccination – Authors' reply (2012) (3)
- Antiviral usage for H1N1 treatment: pros, cons and an argument for broader prescribing guidelines in the United States. (2009) (3)
- Antimicrobial resistance and use, and rates of hospitalization associated with bacterial infections, including sepsis (2018) (2)
- Predispensing of antivirals to high-risk individuals in an influenza pandemic. (2009) (2)
- Excess COVID-19 associated deaths among the unvaccinated population >= 18 years old in the US, May 30 through December 4, 2021 (2022) (2)
- Capsule Homology Does Not Increase the Frequency of Transformation of Linked Penicillin Binding Proteins PBP 1a and PBP 2x in Streptococcus pneumoniae (2005) (2)
- New Decade of Vaccines 3 Vaccine production, distribution, access, and uptake (2011) (2)
- Assessing the feasibility of Nipah vaccine efficacy trials based on previous outbreaks in Bangladesh. (2021) (2)
- Erratum: Antimicrobial use and antimicrobial resistance: A population perspective (Emerging Infectious Disease 8:4) (2002) (2)
- The potential for "spillover" in outpatient antibiotic stewardship interventions among US states (2019) (2)
- Coronavirus: sampling now for future analysis (2020) (2)
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- Erratum for Lipsitch and Inglesby, Moratorium on Research Intended To Create Novel Potential Pandemic Pathogens (2015) (2)
- Quantifying the surveillance required to sustain genetic marker-based antibiotic resistance diagnostics (2019) (2)
- Population genomics of pneumococcal carriage in Massachusetts children following PCV-13 introduction (2017) (2)
- How Do Antimicrobial Agents Lead to Resistance in Pathogens Causing Acute Respiratory Tract Infections? (2006) (2)
- Use of an individual-based model of pneumococcal carriage for planning a randomized trial of a vaccine (2018) (2)
- Effect of antimicrobial treatment for acute otitis media on carriage of Streptococcus pneumoniae with reduced susceptibility to penicillin in a randomized, double-blind, placebo-controlled trial (2017) (2)
- Colonoscopy and Risk of Infective Endocarditis in the Elderly. (2016) (2)
- The ENSO-pandemic influenza connection: coincident or causal? (2011) (2)
- Analysis of a meningococcal meningitis outbreak in Niger – potential effectiveness of reactive prophylaxis (2019) (2)
- Comment on “Gain-of-Function Research and the Relevance to Clinical Practice” (2016) (2)
- Programmatic goals and spatial epidemiology influence the merit of targeted versus of population-wide interventions for yaws eradication (2019) (2)
- Response to Dawson et al. (2020) (2)
- Infections, Hospitalizations, and Deaths Averted Via Direct Effects of the Pfizer-BioNTech BNT162b2 mRNA COVID-19 Vaccine in a Nationwide Vaccination Campaign, Israel (2021) (2)
- Reply to Cochrane Neuraminidase Inhibitors Review Team (2011) (2)
- YI.4 Gonococcal Genomics Shows Impact of Recombination on Obscuring Phylogenetic Signal and Disseminating Resistance Loci (2013) (1)
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- Absolute Humidity and the Seasonality of Influenza (Invited) (2010) (1)
- Epidemiologic data and pathogen genome sequences: a powerful synergy for public health (2014) (1)
- O03.4 Genomic Epidemiology of Neisseria Gonorrhoeae with Reduced Susceptibility to Cefixime in the United States (2013) (1)
- Wrong question and the wrong standard of proof (2022) (1)
- H1N1 vaccination and adults with underlying health conditions in the US. (2009) (1)
- Response to comment on 'The distribution of antibiotic use and its association with antibiotic resistance' (2019) (1)
- Determinants of Staphylococcus aureus carriage in the developing infant nasal microbiome (2020) (1)
- Ethical Comparators in Coronavirus Vaccine Trials (2020) (1)
- Antibiotic prescribing across age groups in the Kaiser Permanente Northern California population in association with different diagnoses, and with influenza incidence, 2010–2018 (2022) (1)
- Reply to ‘Declining adherence as a more likely explanation than frailty of the apparent decline in efficacy in the CAPRISA 004 trial’ (2012) (1)
- Erratum: Addendum: Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China (Nature medicine (2020) 26 4 (506-510)) (2020) (1)
- Evolution in health and disease. (1997) (1)
- Impact of antimicrobial treatment for acute otitis media on carriage dynamics of penicillin-susceptible and penicillin–non-susceptible Streptococcus pneumoniae: secondary analysis of a randomized, double-blind, placebo-controlled trial (2017) (1)
- Leveraging Serosurveillance and Postmortem Surveillance to Quantify the Impact of Coronavirus Disease 2019 in Africa (2022) (1)
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- Applications of quantitative modeling to influenza virus transmission dynamics, antigenic and genetic evolution, and molecular structure (2013) (1)
- Author response: Improving pandemic influenza risk assessment (2014) (1)
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- Good science is good science: we need specialists, not sects (2020) (1)
- Antibiotic Consumption and Antibiotic Resistance Across Organisms, Drugs, and Consumer Groups (2017) (1)
- Antibiotic use and presumptive pathogens in the Veterans Affairs Healthcare System. (2021) (1)
- Epidemiologic evidence on age-related immunity to 2009 H1N1 influenza (2010) (1)
- Large variation in the association between seasonal antibiotic use and resistance across multiple bacterial species and antibiotic classes (2020) (1)
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- Using the Association Between Antibiotic Susceptibility and Genetic Relatedness to Rescue Old Drugs for Empiric Use (2019) (0)
- Prescribing for different antibiotic classes across age groups in the Kaiser Permanente Northern California population in association with influenza incidence, 2010–2018 (2022) (0)
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- Opsonization with C3b/iC3b Degree of Factor H Binding and Serotype Invasiveness Correlates with the Streptococcus pneumoniae Capsular (2013) (0)
- Antibody testing will enhance the power and accuracy of COVID-19-prevention trials (2020) (0)
- Addendum: Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China (2020) (0)
- Comparative performance of between-population vaccine allocation strategies with applications for emerging pandemics (2023) (0)
- Predispensing of antivirals to high-risk individuals in an influenza pandemic. (2009) (0)
- Evaluation of Nowcasting for Real-Time COVID-19 Tracking — New York City, March–May 2020 (2020) (0)
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- The potential for “ spillover ” in outpatient antibiotic stewardship interventions 1 among US states 2 3 Short title : Geography of outpatient stewardship interventions 4 5 (2019) (0)
- Predispensing of antivirals to high-risk individuals in an influenza pandemic. (2009) (0)
- Nowcasting by Bayesian Smoothing [R package NobBS version 0.1.0] (2020) (0)
- The severity of pandemic H1N1 influenza in the United States, April - July 2009. (2009) (0)
- Title Serotype specific invasive capacity and persistent reduction in invasive pneumococcal disease (2011) (0)
- Increased vaccine sensitivity of an emerging SARS-CoV-2 variant (2023) (0)
- Evaluating reduced effectiveness after repeat influenza vaccination while accounting for confounding by recent infection and within-season waning (2023) (0)
- Strengthen oversight of risky research on pathogens (2022) (0)
- Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China (2020) (0)
- Title Managing and reducing uncertainty in an emerging influenzapandemic (2009) (0)
- P1-S4.04 Biases in the design of studies assessing the role of sexually transmitted infections as HIV risk factors (2011) (0)
- Fairness and efficiency considerations in COVID-19 vaccine allocation strategies: A case study comparing front-line workers and 65–74 year olds in the United States (2023) (0)
- Identification of pneumococcal colonization determinants in the stringent response pathway facilitated by genomic diversity (2015) (0)
- Defusing a Biological Bomb. (2015) (0)
- Predispensing of antivirals to high-risk individuals in an influenza pandemic. (2009) (0)
- Zika open site, according to the protocol for public health emergencies for international concern (2016) (0)
- Interaction Patterns of Men Who Have Sex With Men on a Geosocial Networking Mobile App in Seven United States Metropolitan Areas: Observational Study (Preprint) (2019) (0)
- Frequency-dependent selection in vaccine-associated pneumococcal population dynamics (2017) (0)
- Using combination chemotherapy to control antiviral resistance during the next influenza pandemic (2008) (0)
- Deep-sequence phylogenetics to quantify patterns of HIV transmission in the context of a universal testing and treatment trial – BCPP/Ya Tsie trial (2022) (0)
- Defining and emulating target trials of the effects of postexposure vaccination using observational data (2023) (0)
- Monitoring the fitness of transmissible antiviral resistant influenza strains (2016) (0)
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