Marcel Martin
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Marcel Martincomputer-science Degrees
Computer Science
#9101
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#9564
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Computational Linguistics
#2148
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#2170
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Machine Learning
#3903
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#3950
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Artificial Intelligence
#4235
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#4294
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Computer Science
Marcel Martin's Degrees
- PhD Computer Science Stanford University
- Masters Computer Science University of California, Berkeley
- Bachelors Computer Science University of California, Berkeley
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Why Is Marcel Martin Influential?
(Suggest an Edit or Addition)Marcel Martin's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Cutadapt removes adapter sequences from high-throughput sequencing reads (2011) (18335)
- Exome sequencing identifies recurrent somatic mutations in EIF1AX and SF3B1 in uveal melanoma with disomy 3 (2013) (413)
- WhatsHap: fast and accurate read-based phasing (2016) (207)
- Deep sequencing reveals differential expression of microRNAs in favorable versus unfavorable neuroblastoma (2010) (190)
- A comprehensive molecular study on Coffin-Siris and Nicolaides-Baraitser syndromes identifies a broad molecular and clinical spectrum converging on altered chromatin remodeling. (2013) (176)
- Atropos: specific, sensitive, and speedy trimming of sequencing reads (2017) (159)
- Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity (2016) (151)
- Computational pan-genomics: status, promises and challenges (2016) (145)
- SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population (2017) (136)
- The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing (2016) (126)
- Concomitant p53 gene mutation and increased radiosensitivity in rat lung embryo epithelial cells during neoplastic development. (1994) (102)
- Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification (2016) (94)
- Discovering motifs that induce sequencing errors (2013) (70)
- From cytogenetics to cytogenomics: whole-genome sequencing as a first-line test comprehensively captures the diverse spectrum of disease-causing genetic variation underlying intellectual disability (2019) (70)
- Exact and heuristic algorithms for weighted cluster editing. (2007) (69)
- Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants (2018) (51)
- Oto-facial syndrome and esophageal atresia, intellectual disability and zygomatic anomalies - expanding the phenotypes associated with EFTUD2 mutations (2013) (48)
- The SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysis (2011) (45)
- De Novo Assembly of Two Swedish Genomes Reveals Missing Segments from the Human GRCh38 Reference and Improves Variant Calling of Population-Scale Sequencing Data (2018) (44)
- High-Quality Library Preparation for NGS-Based Immunoglobulin Germline Gene Inference and Repertoire Expression Analysis (2019) (41)
- Massive parallel bisulfite sequencing of CG-rich DNA fragments reveals that methylation of many X-chromosomal CpG islands in female blood DNA is incomplete. (2009) (41)
- Bioconda: sustainable and comprehensive software distribution for the life sciences (2017) (40)
- Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification (2018) (37)
- Read-based phasing of related individuals (2016) (36)
- Loss of heterozygosity events impeding breast cancer metastasis contain the MTA1 gene. (2001) (34)
- Next‐generation RNA sequencing reveals differential expression of MYCN target genes and suggests the mTOR pathway as a promising therapy target in MYCN‐amplified neuroblastoma (2013) (33)
- Amplikyzer: Automated methylation analysis of amplicons from bisulfite flowgram sequencing (2013) (30)
- Exon-level expression analyses identify MYCN and NTRK1 as major determinants of alternative exon usage and robustly predict primary neuroblastoma outcome (2012) (26)
- Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics (2021) (25)
- DECOMP - from interpreting Mass Spectrometry peaks to solving the Money Changing Problem (2008) (24)
- Recognition of Manual Actions Using Vector Quantization and Dynamic Time Warping (2010) (19)
- Extensive dissemination and intraclonal maturation of HIV Env vaccine-induced B cell responses (2019) (18)
- Identifying transcriptional miRNA biomarkers by integrating high-throughput sequencing and real-time PCR data. (2013) (13)
- Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants. (2020) (10)
- From cutadapt to sequencetools (sqt): a versatile toolset for sequencing projects (2012) (8)
- HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads (2017) (8)
- Clonally heritable gene expression imparts a layer of diversity within cell types (2022) (8)
- Algorithms and tools for the analysis of high throughput DNA sequencing data (2014) (6)
- Author response: The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing (2016) (6)
- Aligning Flowgrams to DNA Sequences (2013) (3)
- minute: A MINUTE-ChIP data analysis workflow (2022) (2)
- Deep sequencing of the small-RNA transcriptome reveals differenzial expression of microRNAs in high-risk versus low-risk neuroblastoma (2010) (1)
- Discovering motifs that induce sequencing errors (2013) (1)
- A BWT-Based Suffix Array Construction (2009) (1)
- Read-Based Phasing and Analysis of Phased Variants with WhatsHap. (2023) (1)
- From cytogenetics to cytogenomics whole genome sequencing as a comprehensive genetic test in rare disease diagnostics (2019) (1)
- A symbol-oriented approach to motion analysis (2009) (0)
- The Coffin-Siris and Nicolaides Baraitser syndromes – clinical phenotypes of 43 prerviously unreported patients and mutational spectrum of the SWI/SNF complex (2012) (0)
- trimming of sequencing reads 2 (2017) (0)
- Exon-level gene expression analyses of primary neuroblastoma improves risk prediction and identifies JARID1C as a candidate target (2009) (0)
- Abstract P6-13-18: Triple-negative kinase profile guides in the selection of the multi-kinase inhibitor EC70124 as an active antitumor agent (2016) (0)
- From cytogenetics to cytogenomics: whole-genome sequencing as a first-line test comprehensively captures the diverse spectrum of disease-causing genetic variation underlying intellectual disability (2019) (0)
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What Schools Are Affiliated With Marcel Martin?
Marcel Martin is affiliated with the following schools: