Marek Kimmel
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Mathematics
Marek Kimmel's Degrees
- PhD Statistics University of Warsaw
- Masters Mathematics University of Warsaw
- Bachelors Mathematics University of Warsaw
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(Suggest an Edit or Addition)Marek Kimmel's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Branching processes in biology (2002) (496)
- Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci. (1997) (438)
- The effect of surgical treatment on survival from early lung cancer. Implications for screening. (1992) (362)
- simuPOP: a forward-time population genetics simulation environment (2005) (312)
- Mathematical model of NF- κB regulatory module (2004) (303)
- Lymphomas in dogs a morphologic, immunologic, and clinical study (1990) (255)
- Signatures of population expansion in microsatellite repeat data. (1998) (232)
- Prediction of missense mutation functionality depends on both the algorithm and sequence alignment employed (2011) (213)
- An accurate, sensitive, and scalable method to identify functional sites in protein structures. (2003) (191)
- Impact of Reduced Tobacco Smoking on Lung Cancer Mortality in the United States During 1975–2000 (2012) (161)
- Chronic Infection Depletes Hematopoietic Stem Cells through Stress-Induced Terminal Differentiation. (2016) (156)
- Transcriptional stochasticity in gene expression. (2006) (136)
- Evolutionary Action Score of TP53 Identifies High-Risk Mutations Associated with Decreased Survival and Increased Distant Metastases in Head and Neck Cancer. (2015) (133)
- Mathematical modeling as a tool for planning anticancer therapy. (2009) (116)
- Malignant lymphoma of the breast. A study of 53 patients. (1987) (113)
- Optimal control problems arising in cell‐cycle‐specific cancer chemotherapy (1996) (111)
- Identifying conformational states of macromolecules by eigen-analysis of resampled cryo-EM images. (2011) (106)
- Stochastic regulation in early immune response. (2006) (104)
- New explicit expressions for relative frequencies of single-nucleotide polymorphisms with application to statistical inference on population growth. (2003) (103)
- Molecular mechanisms of autosomal recessive hypercholesterolemia (2003) (97)
- NF-κB and IRF pathways: cross-regulation on target genes promoter level (2015) (96)
- Occult breast carcinoma presenting with axillary lymph node metastases: a follow-up study of 48 patients. (1990) (94)
- Measures of variation at DNA repeat loci under a general stepwise mutation model. (1996) (93)
- Haplotype and linkage disequilibrium architecture for human cancer-associated genes. (2002) (92)
- Apocrine mammary carcinoma. A clinicopathologic study of 72 cases. (1990) (91)
- Wee-1 Kinase Inhibition Overcomes Cisplatin Resistance Associated with High-Risk TP53 Mutations in Head and Neck Cancer through Mitotic Arrest Followed by Senescence (2014) (91)
- Heterogeneity of large macromolecular complexes revealed by 3D cryo-EM variance analysis. (2008) (89)
- Chronic infection drives Dnmt3a-loss-of-function clonal hematopoiesis via IFNγ signaling. (2021) (89)
- Mathematical model of NF-kappaB regulatory module. (2004) (87)
- Microarray experiments and factors which affect their reliability (2015) (81)
- Dynamics of repeat polymorphisms under a forward-backward mutation model: within- and between-population variability at microsatellite loci. (1996) (79)
- Prediction of enzyme function based on 3D templates of evolutionarily important amino acids (2008) (77)
- Cell Cycle as an Object of Control (1995) (75)
- Single TNFα trimers mediating NF-κB activation: stochastic robustness of NF-κB signaling (2007) (75)
- Mathematical models of gene amplification with applications to cellular drug resistance and tumorigenicity. (1990) (74)
- Evolutionary Action Score of TP53 Coding Variants Is Predictive of Platinum Response in Head and Neck Cancer Patients. (2015) (72)
- A power analysis of microsatellite-based statistics for inferring past population growth. (2000) (69)
- Assessment of Luminal and Basal Phenotypes in Bladder Cancer (2020) (68)
- The natural history of lung cancer in a periodically screened population. (1987) (66)
- Hematopoiesis and its disorders: a systems biology approach. (2010) (66)
- Intravesical bacillus Calmette-Guerin therapy for in situ transitional cell carcinoma involving the prostatic urethra. (1989) (65)
- Simulations Provide Support for the Common Disease–Common Variant Hypothesis (2007) (65)
- Analysis of a cell cycle model based on unequal division of metabolic constituents to daughter cells during cytokinesis. (1984) (65)
- Error detection for genetic data, using likelihood methods. (1996) (63)
- Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways (2018) (59)
- Comparison of Approaches to Modeling of Cell Population Dynamics (1993) (58)
- Stability analysis of models of cell production systems (1986) (58)
- Assay of Cell Cycle Kinetics by Multivariate Flow Cytometry Using the Principle of Stathmokinesis (1987) (58)
- Mathematical modeling of the loss of telomere sequences. (1995) (58)
- A note on distributions of times to coalescence, under time-dependent population size. (2003) (57)
- Forward-Time Simulations of Human Populations with Complex Diseases (2007) (56)
- Control Theory Approach to Cancer Chemotherapy: Benefiting from Phase Dependence and Overcoming Drug Resistance (2006) (55)
- Juvenile papillomatosis of the breast. A follow-up study of 41 patients having biopsies before 1979. (1990) (55)
- Human keratinocyte culture. Identification and staging of epidermal cell subpopulations. (1986) (55)
- The response of patients with superficial bladder cancer to a second course of intravesical bacillus Calmette-Guerin. (1990) (53)
- Evolutionary action and structural basis of the allosteric switch controlling β2AR functional selectivity (2017) (52)
- Asymptotic analysis of a cell cycle model based on unequal division (1987) (51)
- Using SVD and SVM methods for selection, classification, clustering and modeling of DNA microarray data (2004) (46)
- Unequal cell division, growth regulation and colony size of mammalian cells: a mathematical model and analysis of experimental data. (1991) (45)
- Stochastic models of telomere shortening. (1999) (44)
- Role of stem-cell divisions in cancer risk (2017) (43)
- DNA/RNA content and proliferative fractions of colorectal carcinomas: a five-year prospective study relating flow cytometry to survival. (1991) (42)
- Nonparametric estimation of the size-metastasis relationship in solid cancers. (1991) (42)
- The MASH Pipeline for Protein Function Prediction and an Algorithm for the Geometric Refinement of 3D Motifs (2007) (42)
- Natural history of adenocarcinoma-large cell carcinoma of the lung: conclusions from screening programs in New York and Baltimore. (1988) (41)
- MODELLING OF EARLY LUNG CANCER PROGRESSION: INFLUENCE OF GROWTH FACTOR PRODUCTION AND COOPERATION BETWEEN PARTIALLY TRANSFORMED CELLS (2007) (41)
- Model-based analysis of interferon-beta induced signaling pathway (2008) (40)
- Algorithms for Structural Comparison and Statistical Analysis of 3D Protein Motifs (2004) (39)
- Application of a time-dependent coalescence process for inferring the history of population size changes from DNA sequence data. (1998) (39)
- Factors Influencing Ascertainment Bias of Microsatellite Allele Sizes: Impact on Estimates of Mutation Rates (2013) (38)
- Time-continuous branching walk models of unstable gene amplification. (1994) (37)
- Gene amplification by unequal sister chromatid exchange: probabilistic modeling and analysis of drug resistance data. (1994) (36)
- A branching process model of gene amplification following chromosome breakage. (1992) (35)
- Rate and directionality of mutations and effects of allele size constraints at anonymous, gene-associated, and disease-causing trinucleotide loci. (1999) (34)
- Qualitative analysis of controlled drug resistance model - inverse Laplace and and semigroup approach (1999) (34)
- Dynamic Cross Talk Model of the Epithelial Innate Immune Response to Double-Stranded RNA Stimulation: Coordinated Dynamics Emerging from Cell-Level Noise (2014) (33)
- Recurrent use of evolutionary importance for functional annotation of proteins based on local structural similarity (2006) (33)
- Adjoint Systems for Models of Cell Signaling Pathways and their Application to Parameter Fitting (2007) (32)
- Flow cytometry as a predictor of response and progression in patients with superficial bladder cancer treated with bacillus Calmette-Guerin. (1989) (32)
- Estrogen receptor protein of breast cancer in patients with positive nodes. High recurrence rates in the postmenopausal estrogen receptor-negative group. (1987) (31)
- Stochastic effects of multiple regulators on expression profiles in eukaryotes. (2005) (31)
- Reaction-Difusion Model of Early Carcinogenesis: The Effects of Influx of Mutated Cells (2008) (31)
- On fitting of mathematical models of cell signaling pathways using adjoint systems. (2005) (30)
- Asymptotic behavior of a nonlinear functional-integral equation of cell kinetics with unequal division (1989) (28)
- CT screening for lung cancer: the first ten years. (2002) (27)
- Quasistationarity in a Branching Model of Division-Within-Division (1997) (27)
- Modeling the mortality reduction due to computed tomography screening for lung cancer (2011) (27)
- DNA dinucleotide evolution in humans: fitting theory to facts. (2001) (26)
- Humoral factors in very young NZB mice that enhance the maturation of normal B cell precursors. Partial purification and characterization. (1985) (26)
- Heterozygous Screen in Saccharomyces cerevisiae Identifies Dosage-Sensitive Genes That Affect Chromosome Stability (2008) (26)
- Deterministic and Stochastic Models of NFκB Pathway (2007) (25)
- Stochastic Hypothesis of Transition from Inborn Neutropenia to AML: Interactions of Cell Population Dynamics and Population Genetics (2013) (25)
- Strength of the purifying selection against different categories of the point mutations in the coding regions of the human genome. (2006) (24)
- Replication Stress Leading to Apoptosis within the S-phase Contributes to Synergism between Vorinostat and AZD1775 in HNSCC Harboring High-Risk TP53 Mutation (2017) (24)
- Cavity-aware motifs reduce false positives in protein function prediction. (2006) (23)
- Dynamics of Growth and Signaling along Linear and Surface Structures in Very Early Tumors (2006) (23)
- Geometric Sieving: Automated Distributed Optimization of 3D Motifs for Protein Function Prediction (2006) (23)
- Forward-Time Population Genetics Simulations: Methods, Implementation, and Applications (2012) (23)
- Complex SNP-based haplotypes in three human helicases: implications for cancer association studies. (2002) (23)
- Model-based analysis of interferon-β induced signaling pathway (2008) (22)
- Stochastic Search Gene Suggestion: A Bayesian Hierarchical Model for Gene Mapping (2006) (21)
- Estimation and prediction of cell cycle specific effects of anticancer drugs (1986) (21)
- Fluctuation test for two-stage mutations: application to gene amplification. (1994) (21)
- Computer simulation of expansions of DNA triplet repeats in the fragile X syndrome and Huntington's disease. (1997) (21)
- Quantitative Biology: Theory, Computational Methods, and Models (2018) (21)
- System Engineering Approach to Planning Anticancer Therapies. (2016) (21)
- Genetic Susceptibility for Lung Cancer: Interactions with Gender and Smoking History and Impact on Early Detection Policies (2003) (20)
- Linkage analyses in type I diabetes mellitus using CASPAR, a software and statistical program for conditional analysis of polygenic diseases. (1997) (20)
- Effects of inhibition of RNA or protein synthesis on CHO cell cycle progression (1987) (20)
- Do all daughter cells enter the "indeterminate" ("A") state of the cell cycle? Analysis of stathmokinetic experiments on L1210 cells. (1983) (20)
- Stathmokinetic Analysis of Human Epidermal Cells in vitro (1986) (20)
- A robust estimator of mutation rates. (2009) (20)
- Pro-inflammatory cytokine and high doses of ionizing radiation have similar effects on the expression of NF-kappaB-dependent genes. (2018) (20)
- TNFalpha-induced activation of NFkappaB protects against UV-induced apoptosis specifically in p53-proficient cells. (2008) (19)
- NF‐κB signaling pathway is inhibited by heat shock independently of active transcription factor HSF1 and increased levels of inducible heat shock proteins (2011) (19)
- Alternatives to the Wright-Fisher model: the robustness of mitochondrial Eve dating. (2010) (19)
- A Systems Biology Approach to Blood (2014) (19)
- A smoking‐based carcinogenesis model for lung cancer risk prediction (2011) (19)
- A NOTE ON CLASSIFICATION OF GENE EXPRESSION DATA USING SUPPORT VECTOR MACHINES (2003) (19)
- Statistical inference for the evolutionary history of cancer genomes (2019) (18)
- Does competition for food imply skewness (1986) (18)
- Cavity Scaling: Automated Refinement of Cavity-Aware motifs in protein Function Prediction (2007) (18)
- RRAD, IL4I1, CDKN1A, and SERPINE1 genes are potentially co-regulated by NF-κB and p53 transcription factors in cells exposed to high doses of ionizing radiation (2018) (18)
- Mathematical model of tumor invasion along linear or tubular structures (2005) (18)
- ITD assembler: an algorithm for internal tandem duplication discovery from short-read sequencing data (2016) (18)
- How the Number of Alleles Influences Gene Expression (2007) (18)
- Estimation of the effects of smoking and DNA repair capacity on coefficients of a carcinogenesis model for lung cancer (2009) (17)
- Association of smoking with tumor size at diagnosis in non-small cell lung cancer. (2011) (17)
- Quantitative analysis reveals crosstalk mechanisms of heat shock-induced attenuation of NF-κB signaling at the single cell level (2018) (17)
- Asymptotic behavior of nonlinear semigroup describing a model of selective cell growth regulation (1991) (17)
- Estimating clonal heterogeneity and interexperiment variability with the bifurcating autoregressive model for cell lineage data. (1997) (17)
- Multitype Bellman-Harris branching model provides biological predictors of early stages of adult hippocampal neurogenesis (2017) (16)
- An application of a general branching process in the study of the genetics of aging. (2001) (16)
- Reaction-diffusion approach to modeling of the spread of early tumors along linear or tubular structures. (2007) (16)
- A multitype infinite-allele branching process with applications to cancer evolution (2015) (16)
- The dependence of expression of NF-κB-dependent genes: statistics and evolutionary conservation of control sequences in the promoter and in the 3′ UTR (2012) (16)
- TNFα-induced activation of NFκB protects against UV-induced apoptosis specifically in p 53-proficient cells (2008) (16)
- Cross talk between cytokine and hyperthermia-induced pathways: identification of different subsets of NF-κB-dependent genes regulated by TNFα and heat shock (2015) (15)
- A note on estimation of dynamics of multiple gene expression based on singular value decomposition. (2003) (15)
- Cellular population dynamics. II. Investigation of solutions (1980) (15)
- Chapter 13: CISNET Lung Models: Comparison of Model Assumptions and Model Structures (2012) (14)
- Voided urine flow cytometry in screening high-risk patients for the presence of bladder cancer. (1990) (14)
- Cellular population dynamics. I. Model construction and reformulation (1980) (14)
- A semigroup representation and asymptotic behavior of certain statistics of the fisher-wright-moran coalescent (2001) (14)
- Modeling neutral evolution of Alu elements using a branching process (2010) (13)
- Modelling and analysis of dynamics of viral infection of cells and of interferon resistance (2008) (13)
- Interactions of neanderthals and modern humans: what can be inferred from mitochondrial DNA? (2005) (13)
- Interferon Gamma Mediates Hematopoietic Stem Cell Activation and Niche Relocalization through BST2. (2020) (13)
- Cell cycle kinetics with supramitotic control, two cell types, and unequal division: a model of transformed embryonic cells. (1991) (13)
- A statistical model to correct systematic bias introduced by algorithmic thresholds in protein structural comparison algorithms (2008) (12)
- Stochasticity and determinism in models of hematopoiesis. (2014) (12)
- Mathematical modelling reveals unexpected inheritance and variability patterns of cell cycle parameters in mammalian cells (2019) (12)
- Using control theory to make cancer chemotherapy beneficial from phase dependence and resistant to drug resistance (2004) (12)
- Different rates of DNA replication at early versus late S‐phase sections: Multiscale modeling of stochastic events related to DNA content/EdU (5‐ethynyl‐2′deoxyuridine) incorporation distributions (2014) (11)
- Evolution and cancer: a mathematical biology approach (2010) (11)
- Irradiation with UV‐C inhibits TNF‐α‐dependent activation of the NF‐κB pathway in a mechanism potentially mediated by reactive oxygen species (2017) (11)
- Detection of bladder carcinoma in females by flow cytometry and cytology. (1989) (11)
- Stochastic models of progression of cancer and their use in controlling cancer-related mortality (2002) (11)
- Retention of the mitochondrial probe rhodamine 123 in normal lymphocytes and leukemic cells in relation to the cell cycle. (1991) (11)
- Modelling growth of drug resistant cancer populations as the system with positive feedback (2003) (11)
- Asymptotic behavior of a Moran model with mutations, drift and recombination among multiple loci (2010) (11)
- ERROR DETECTION IN GENETIC LINKAGE DATA FOR HUMAN PEDIGREES USING LIKELIHOOD RATIO METHODS (1995) (11)
- Modeling Spatial Effects in Early Carcinogenesis : Stochastic Versus Deterministic Reaction-Diffusion Systems (2012) (10)
- The role of interventions in the cancer evolution-an evolutionary games approach. (2018) (10)
- Dynamic balance of segregation distortion and selection maintains normal allele sizes at the myotonic dystrophy locus. (1998) (10)
- A random evolution related to a Fisher–Wright–Moran model with mutation, recombination and drift (2003) (10)
- An equivalence result for integral equations with application to branching processes (1982) (10)
- Asymptotic behavior of joint distributions of characteristics of a pair of randomly chosen individuals in discrete-time Fisher-Wright models with mutations and drift. (2004) (10)
- Non-homogeneous infinite sites model under demographic change: mathematical description and asymptotic behavior of pairwise distributions. (2002) (10)
- TESTING FOR SIGNATURES OF NATURAL SELECTION AT MOLECULAR GENES LEVEL (2004) (10)
- Chapter 11: Rice‐MD Anderson Lung Cancer Model (2012) (9)
- ASYMPTOTIC BEHAVIOUR OF AN OPERATOR EXPONENTIAL RELATED TO BRANCHING RANDOM WALK MODELS OF DNA REPEATS (1999) (9)
- The point-process approach to age- and time-dependent branching processes (1983) (9)
- Modeling neutral evolution using an infinite-allele Markov branching process (2013) (9)
- Modeling epigenetic regulation of PRC1 protein accumulation in the cell cycle (2015) (9)
- Deterministic and stochastic models of NFkappaB pathway. (2007) (9)
- Mathematical model predicts response to chemotherapy in advanced non-resectable non-small cell lung cancer patients treated with platinum-based doublet (2020) (8)
- Initial Medical Attention on Patients with Early-Stage Non-Small Cell Lung Cancer (2012) (8)
- DNA in situ sensitivity to denaturation in bladder cancer and its correlation with tumor stage. (1990) (8)
- A Morphologic, Immunologic, and Clinical Study (1990) (8)
- Estimating the growth rates of primary lung tumours from samples with missing measurements (2005) (8)
- Control Problems Arising in Chemotherapy Under Evolving Drug Resistance (1996) (7)
- Dynamics of the life history of a DNA-repeat sequence (1999) (7)
- A model of dynamics of mutation, genetic drift and recombination in DNA-repeat genetic loci (1999) (7)
- Nonparametric analysis of stathmokinesis (1985) (7)
- NF-κB and IRF pathways: cross-regulation on target genes promoter level (2015) (7)
- Stability of bacterial toggle switches is enhanced by cell-cycle lengthening by several orders of magnitude. (2014) (7)
- Gaussian Mixture Decomposition of Time-Course DNA Microarray Data (2007) (7)
- Composite motifs integrating multiple protein structures increase sensitivity for function prediction. (2007) (7)
- A Simple Model of Linkage Disequilibrium and Genetic Drift in Human Genomic SNPs: Importance of Demography and SNP Age (2006) (6)
- Heat shock response regulates stimulus-specificity and sensitivity of the pro-inflammatory NF-κB signalling (2020) (6)
- The iterated Galton–Watson process (1996) (6)
- An Operator Semigroup in Mathematical Genetics (2015) (6)
- Stochastic approach to the process of red cell destruction (1982) (6)
- DNA in situ sensitivity to denaturation as a marker of human breast tumors. (1989) (6)
- Gene characteristics predicting missense, nonsense and frameshift mutations in tumor samples (2018) (6)
- A discrete-time, multi-type generational inheritance branching process model of cell proliferation. (1996) (6)
- Effects of [3H]Udr On the Cell‐Cycle Progression of L1210 Cells (1984) (6)
- Asymptotic Analysis of a Functional-Integral Equation Related to Cell Population Kinetics (1985) (6)
- Modeling Lung Cancer Screening (2006) (6)
- Population dynamics coded in DNA: genetic traces of the expansion of modern humans (1999) (5)
- The stathmokinetic experiment: a single-parameter and multiparameter flow cytometric analysis. (1990) (5)
- Control theoretic approach to random branching walk models arising in molecular biology (2002) (5)
- Exploring the Landscape of Protein-Ligand Interaction Energy Using Probabilistic Approach (2011) (5)
- Statistical Analysis of Missense Mutation Classifiers (2013) (5)
- Coalescence computations for large samples drawn from populations of time-varying sizes (2017) (5)
- Mutation, drift and selection in single-driver hematologic malignancy: Example of secondary myelodysplastic syndrome following treatment of inherited neutropenia (2019) (5)
- Advances in mathematical population dynamics - molecules, cells and man : proceedings of the 4th International Conference on Mathematical Population Dynamics (1998) (5)
- Crosstalk between stress-induced NF-κB, p53 and HSF1 signaling pathways – review. (2014) (4)
- Non‐parametric analysis of platelet lifespan (1990) (4)
- A general calculus of fitness landscapes finds genes under selection in cancers (2022) (4)
- A note on the path to extinction of critical Markov branching processes (2010) (4)
- Noncompact semigroups of operators generated by cell kinetics models (1991) (4)
- Modes of Selection in Tumors as Reflected by Two Mathematical Models and Site Frequency Spectra (2022) (4)
- Modeling excess lung cancer risk among screened arm participants in the Mayo Lung Project (2009) (4)
- The origin of bladder cancer from mucosal field effects (2021) (4)
- Improved classification of microarray gene expression data using support vector machines (2001) (4)
- Genomic Analysis of SARS-CoV-2 Alpha, Beta and Delta Variants of Concern Uncovers Signatures of Neutral and Non-Neutral Evolution (2022) (3)
- Predicting Time to Relapse in Acute Myeloid Leukemia through Stochastic Modeling of Minimal Residual Disease Based on Clonality Data. (2021) (3)
- On the clonal inheritance model of cell proliferation (1995) (3)
- Heat shock factor 1 (HSF1) cooperates with estrogen receptor α (ERα) in the regulation of estrogen action in breast cancer cells (2021) (3)
- Predicting Minimal Residual Disease in Acute Myeloid Leukemia through Stochastic Modeling of Clonality (2019) (3)
- Application of the Moran Model in Estimating Selection Coefficient of Mutated CSF3R Clones in the Evolution of Severe Congenital Neutropenia to Myeloid Neoplasia (2020) (3)
- Modeling the Natural History and Detection of Lung Cancer Based on Smoking Behavior (2014) (3)
- Analysis of two mechanisms of telomere maintenance based on the theory of g-Networks and stochastic automata networks (2020) (3)
- Abstract 4449: Initial medical attention on patients with stage I or II non-small cell lung cancer (2012) (3)
- T-cell subsets in peripheral blood of patients with newly diagnosed and posttreatment Hodgkin's and non-Hodgkin's lymphomas. Analysis by monoclonal antibody staining and flow cytometry. (1988) (3)
- Mathematical Model of Leukemic-Cell Circulation in the Mouse (1983) (3)
- A mathematical model as a tool to identify microRNAs with highest impact on transcriptome changes (2019) (3)
- Asymptotic properties of infinite dimensional model of drug resistance evolution (1997) (3)
- The Sensitivity of Bladder Wash Flow Cytometry, Baldder Wash Cytology and Voided Cytology in the Detection of Bladder Carcinoma (1987) (2)
- Griffiths–Pakes branching process as a model for evolution of Alu elements (2010) (2)
- Parameter estimation for models of cell signaling pathways based on semi-quantitative data (2006) (2)
- Analysis of a Cell Population Model with Unequal Division and Random Transition (2020) (2)
- Analysis of differences in amino acid substitution patterns, using multilevel G-tests. (2005) (2)
- Small median tumor diameter at cure threshold (<20 mm) among aggressive non‐small cell lung cancers in male smokers predicts both chest X‐ray and CT screening outcomes in a novel simulation framework (2013) (2)
- POPULATION GENETICS MODELS FOR THE STATISTICS OF DNA SAMPLES UNDER DIFFERENT DEMOGRAPHIC SCENARIOS—MAXIMUM LIKELIHOOD VERSUS APPROXIMATE METHODS (2003) (2)
- Spatial and Stochastic Effects in a Model of Viral Infection (2012) (2)
- On Things Not Seen (2016) (2)
- A system of differential equations modeling the G1 phase of the cell cycle (1989) (2)
- ITD assembler: an algorithm for internal tandem duplication discovery from short-read sequencing data (2015) (2)
- Pharmacogenetic characterization of naturally occurring germline NT5C1A variants to chemotherapeutic nucleoside analogs (2016) (2)
- Mathematical model of the proliferation cycle of lymphoblastic leukemia cells. (1979) (2)
- Thick distribution tails in models of cancer secondary tumors (2018) (2)
- Deterministic modeling of interferon-beta signaling pathway (2006) (2)
- SAMPLING PROPERTIES OF ESTIMATORS OF NUCLEOTIDE DIVERSITY AT DISCOVERED SNP SITES (2003) (2)
- Computational approach for modeling and testing NF-kB binding sites (2014) (2)
- Branching Processes with Infinitely Many Types (2015) (2)
- Infection Is a Driver of Dnmt3a-Mutant Clonal Hematopoiesis (2019) (1)
- Analysis of different variants of erythrocyte survival using digital computers. (1979) (1)
- Identification of lung cancer drivers by comparison of the observed and the expected numbers of missense and nonsense mutations in individual human genes (2022) (1)
- Detection and characterization of replication origins defined by DNA polymerase epsilon (2021) (1)
- Epidemiology, cellular automata, and evolution: Preface (1999) (1)
- Time to the MRCA of a sample in a Wright-Fisher model with variable population size. (2011) (1)
- Non‐homogeneous infinitely many sites discrete‐time model with exact coalescent (2010) (1)
- Effect of the unfolded protein response and oxidative stress on mutagenesis in CSF3R: a model for evolution of severe congenital neutropenia to myelodysplastic syndrome/acute myeloid leukemia. (2019) (1)
- Multitype infinite-allele branching processes in continuous time (2017) (1)
- Systems hematology: an introduction. (2014) (1)
- Genomic trajectory in leukemogenesis of myeloproliferative neoplasms: a case report (2021) (1)
- Structured Models and Their Use in Modeling Anticancer Therapies (2016) (1)
- Adjusting a cancer mortality-prediction model for disease status-related eligibility criteria (2011) (1)
- In Silico Analysis of Interactions Between NFkB and HSF Pathways (2015) (1)
- Heat Shock Factor 1 (HSF1) as a new tethering factor for ESR1 supporting its action in breast cancer (2021) (1)
- Chronic Infection Depletes Hematopoietic Stem Cells through Stress-Induced Terminal Differentiation (2016) (1)
- Two simple models of almost the same population with very different dynamics. (1994) (1)
- Evolutionary Action Score of TP 53 Coding Variants ( EAp 53 ) is Predictive of Platinum Response in Head and Neck Cancer Patients (2015) (1)
- A simple model of cell cycle dynamics with application to estimation of cell cycle parameters. (1985) (1)
- Time-continuous branching walk models of unstable gene amplification (1994) (1)
- Medical simulation and modelling: On active linear compartments (1988) (1)
- Error Analysis of Genetic Linkage Data (1997) (1)
- Modeling of the Process of Telomere Shortening : an Overview (2010) (1)
- The Bellman–Harris Process (2015) (1)
- Asymptotic analysis of three random branching walk models arising in molecular biology (2003) (1)
- The Sensitivity of Flow Cytometry (FCM) Compared with Conventional Cytology in the Detection of Superficial Bladder Carcinoma (1987) (1)
- Emergence of stable DNA repeats from random sequences under unequal sister chromatid exchange (1995) (1)
- Moran Process Version of the Tug-of-War Model: Complex Behavior Revealed by Mathematical Analysis and Simulation Studies (2021) (1)
- The Galton–Watson Process (2015) (1)
- Changes in heat shock duration influence regulatory schemes of HSF1 activity (2014) (1)
- Comparison of Connectionist and Rough Set Based Knowledge Discovery Methods in Search for Selection in Genes Implicated in Human Familial Cancer (2013) (1)
- Model Identification and Parameter Estimation (2016) (1)
- Hypocellular bladder wash specimens and their clinical significance. (1993) (1)
- Heavy-tailed distributions in branching process models of secondary cancerous tumors (2018) (1)
- £37.50 (cloth), 247 pp.T.E. Wheldon, Mathematical Models in Cancer Research, Adam Hilger (1988). (1989) (0)
- Stem Cell Proliferation and Differentiation: A Multitype Branching Process Model, Catherine A. Macken, Alan S. Perelson. Springer-Verlag (1988), U.S. $16.30 (paper), 113 pp (1991) (0)
- Motivating Example: Population Bottlenecks in the History of Modern Humans, Use of the Imbalance Index (2015) (0)
- Abstract 857: A preliminary study of the correlation of tumor size and epidemiological characteristics in patients with non-small cell lung cancer (2010) (0)
- Stochastic models of stem cells and their descendants under different criticality assumptions (2022) (0)
- Modeling the Dynamics of the RIGI-MAVS / NF-κ B / IRF 3 Signaling Pathway (0)
- Facing Emerging and Re-emerging Diseases (2006) (0)
- Statistical Methods in Molecular Evolution. Rasmus Nielsen (ed.) (2006) (0)
- Application of the Stochastic Moran Model of Population Genetics to Understanding the Timing of a Driver Mutation in Myelodysplastic Syndrome (MDS) (2014) (0)
- Detection and characterization of constitutive replication origins defined by DNA polymerase epsilon (2023) (0)
- Therapy Optimization in Population Dynamics Models (2016) (0)
- Signaling Pathways Dynamics and Cancer Treatment (2016) (0)
- IFNg Signaling is a Driver of Dnmt3a-Mutant Clonal Hematopoiesis (2020) (0)
- Genome signals and assembly (2005) (0)
- RRAD, IL4I1, CDKN1A, and SERPINE1 genes are potentially co-regulated by NF-κB and p53 transcription factors in cells exposed to high doses of ionizing radiation (2018) (0)
- Stochastic Effects in Signaling Pathways in Cells: Interaction between Visualization and Modeling (2009) (0)
- Book Review:Biograph. Version 2.02. Garrett M. Odell, Lee A. Segel's (1990) (0)
- Abstract B2-50: Stochastic population genetics modeling of the evolution of the myelodysplastic syndrome (2015) (0)
- Representations of Structural Motifs for Protein Function Prediction (2007) (0)
- A Novel Role for Bst2 and E-Selectin in IFNg-Stimulated HSC Niche Relocalization (2018) (0)
- Stochastic processes of mutation, selection and growth in cancer: models and data (2014) (0)
- Nonrandom Mating and its Applications (2012) (0)
- A mathematical model as a tool to identify microRNAs with highest impact on transcriptome changes (2019) (0)
- Preface to Session 70 " Mathematical models and methods to investigate heterogeneity in cell and cell population biology " (2015) (0)
- Author response: Heat shock factor 1 (HSF1) cooperates with estrogen receptor α (ERα) in the regulation of estrogen action in breast cancer cells (2021) (0)
- Geometry-inspired Optimization Methods for Structural Motifs for Protein Function Prediction (2007) (0)
- Simulation of Population Genetics Models (2012) (0)
- U.S. $16.30 (paper), 113 ppCatherine A. Macken and Alan S. Perelson, Stem Cell Proliferation and Differentiation: A Multitype Branching Process Model, Springer-Verlag (1988). (1991) (0)
- Screening for Cancer in Relation to the Natural History of the Disease (2020) (0)
- Development of Multi-Null-Hypotheses Method for Detection of Selective Forces at Molecular Level in Evolution of Human Genes Involved in DNA-Repair Mechanism Impaired in Cancer Progression (2014) (0)
- Master Equation and Asymptotic Behavior of Its Solutions (2015) (0)
- Reaction-difusion model of early carcinogenesis (2008) (0)
- Microarray experiments and factors which affect their reliability (2015) (0)
- Heat shock response regulates stimulus-specificity and sensitivity of the pro-inflammatory NF-κB signalling (2020) (0)
- Deterministic models with applications in population dynamics and other fields of biology: Preface (1999) (0)
- Master Equation and Asymptotic Behavior of Its Solutions (2015) (0)
- Moran process version of the tug-of-war model: Behavior revealed by mathematical analysis and simulation studies (2023) (0)
- Genealogies of Branching Processes and Their Applications (2015) (0)
- Sloppy/Stiff Parameters Rankings in Sensitivity Analysis of Signaling Pathways (2016) (0)
- Analysis of dynamics of gene exspression using singular value decomposition (2002) (0)
- Stationary Distribution of Telomere Lengths in Cells with Telomere Length Maintenance and its Parametric Inference (2020) (0)
- Methods for estimation of demographic parameters from DNA sequence samples (2002) (0)
- Identification and identifiability of models of cell signalling pathways (2008) (0)
- CliP: subclonal architecture reconstruction of cancer cells in DNA sequencing data using a penalized likelihood model (2021) (0)
- The dependence of expression of NF-κB-dependent genes: statistics and evolutionary conservation of control sequences in the promoter and in the 3′ UTR (2012) (0)
- Statistical Methods in Molecular Evolution (2006) (0)
- Appendix: Forward‐Time Simulations Using simuPOP (2012) (0)
- Statistical Inference From Stem Cell Barcoding Data Using Adaptive Approximate Bayesian Computation (2021) (0)
- Motivating Examples and Other Preliminaries (2015) (0)
- Abstract 4272: Pan-cancer analysis of intra-tumor heterogeneity in 9,116 cancers using a novel regularized likelihood model (2023) (0)
- Bayesian birds: concerning the paper of R. F. Green (1983) (0)
- Evolutionary action and structural basis of the allosteric switch controlling β2AR functional selectivity (2017) (0)
- Terminal differentiation is the major route of HSC loss during chronic infection (2016) (0)
- Cross talk between cytokine and hyperthermia-induced pathways: identification of different subsets of NF-κB-dependent genes regulated by TNFα and heat shock (2015) (0)
- Gene characteristics predicting missense, nonsense and frameshift mutations in tumor samples (2018) (0)
- Methods of error detection in genetic linkage data for human pedigrees (1994) (0)
- Simulating Populations with Complex Human Diseases (2012) (0)
- Multi-null hypotheses method as an expert knowledge generator for AI-based detection of selection operating at molecular level (2013) (0)
- Ascertainment Bias in Population Genetics (2012) (0)
- Modeling epigenetic regulation of PRC1 protein accumulation in the cell cycle (2015) (0)
- Pre-selective and selective phase in tumor development (2016) (0)
- Observing Properties of Evolving Populations (2012) (0)
- Ovide Arino, a personal memory (2007) (0)
- Stability of infinite-dimensional model of microsatellite DNA repeats (1999) (0)
- Terminal Differentiation is the Major Route of Hematopoietic Stem Cell Loss During Chronic Infection (2016) (0)
- Genetic demographic networks: Mathematical model and applications. (2016) (0)
- Analysis of a Countable-Type Branching Process Model for the Tug-of-War Cancer Cell Dynamics (2023) (0)
- Special issue dedicated to the memory of Ovide Arino (2007) (0)
- WHY MATHEMATICS IS NEEDED TO UNDERSTAND COMPLEX GENETICS DISEASES (2002) (0)
- IFNy Stimulation Induces Hematopoietic Stem Cell Homing and Niche Relocalization (2019) (0)
- The new model of mRNA degradation based on the recent advances in the DcpS enzyme specificity towards m 7 GDP (2014) (0)
- Deterministic and Stochastic Models of NF j B Pathway (2007) (0)
- Finite absorbing Markov chain as a model of small-ligand binding process (2013) (0)
- Bernoulli mixture models in application to the evaluation of algorithms estimating functionality of missense mutations (2012) (0)
- Open Access EDITORIAL (2010) (0)
- Modeling Spatial Effects in Carcinogenesis: Stochastic and Deterministic Reaction-Diffusion (2014) (0)
- Mutation patterns in SARS-COV-2 Alpha and Beta variants indicate non-neutral evolution (2022) (0)
- Clonal Competition: Cisplatin Treatment Drives Dominance of TP53- over Tet2-Mutant Stem Cell Clones (2022) (0)
- Are infinite dimensional models applicable in modelling and analysis of cancer chemotherapy (2004) (0)
- Abstract A14: Small Tumor Diameter at Cure Threshold (< 20mm) Among Aggressive Lung Cancers Predicts both Chest X-ray and CT Screening Outcomes in a Novel Simulation Framework (2012) (0)
- Erratum: Modeling the mortality reduction due to computed tomography screening for lung cancer (Cancer (2011) 117 (2703-2708)) (2011) (0)
- Evolutionary analysis of genomes of SARS-CoV-2-related bat viruses suggests old roots, constant effective population size, and possible increase of fitness (2022) (0)
- Basic Concepts and Models (2012) (0)
- Single nucleotide polymorphisms applied in statistical inference of population growth (2003) (0)
- Heat shock response pathways regulate stimulus-specificity and sensitivity of NF-κB signalling to temperature stress (2019) (0)
- Bone Marrow Stromal Antigen 2 Is Critical for IFNy-Dependent Hematopoietic Stem Cell Activation (2020) (0)
- Modelling of cell aging - system theoretic approach (2001) (0)
- Abstract A8: Functional analysis of genomic variants identified through whole exome sequencing of pediatric lymphocytic leukemia kindreds (2014) (0)
- Modeling Protein–Ligand Interaction with Finite Absorbing Markov Chain (2015) (0)
- Deterministic and Stochastic Models of NFjB Pathway (2007) (0)
- Abstract 5113: Functional analysis of genomic variants identified through whole exome sequencing for susceptibility to lymphocytic leukemia (2012) (0)
- A Survey of Text Processing Tools for the Automatic Analysis of Molecular Sequences (2009) (0)
- Abstract B02: Modeling the natural history and detection of lung cancer (2012) (0)
- 38 INFINITE-ALLELE BRANCHING PROCESS IN THE EVOLUTION OF THE MYELODYSPLASTIC SYNDROME (2015) (0)
- The Age-Dependent Process: Markov Case (2015) (0)
- mathematical population dynamics: Proceedings of the Second International Conference (2017) (0)
- Error Detection in Genetic Linkage Data forHuman Pedigrees Using Likelihood Ratio MethodsMargaret (1995) (0)
- Chapter 1 Systems Hematology : An Introduction (2019) (0)
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What Schools Are Affiliated With Marek Kimmel?
Marek Kimmel is affiliated with the following schools:
