Martin Embley
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Biology
Martin Embley's Degrees
- Masters Genetics University of Oxford
- PhD Evolutionary Biology Stanford University
Why Is Martin Embley Influential?
(Suggest an Edit or Addition)According to Wikipedia, Martin Embley is a professor at Newcastle University who has made contributions to our understanding of the origin of eukaryotes and the evolution of organelles such as mitochondria, mitosomes and hydrogenosomes, that are found in parasitic protists.
Martin Embley's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- The Genome of the African Trypanosome Trypanosoma brucei (2005) (1633)
- Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments (1997) (866)
- Eukaryotic evolution, changes and challenges (2006) (846)
- The genome of the protist parasite Entamoeba histolytica (2005) (808)
- Comparative Genomics of Trypanosomatid Parasitic Protozoa (2005) (762)
- Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis (2007) (739)
- Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins. (1999) (516)
- An archaeal origin of eukaryotes supports only two primary domains of life (2013) (440)
- Molecular diversity of soil and marine 16S rRNA gene sequences related to beta-subgroup ammonia-oxidizing bacteria (1996) (429)
- A mitochondrial remnant in the microsporidian Trachipleistophora hominis (2002) (401)
- The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal RNA gene sequences. (1993) (386)
- Some rumen ciliates have endosymbiotic methanogens. (1994) (339)
- The archaebacterial origin of eukaryotes (2008) (315)
- The molecular phylogeny and systematics of the actinomycetes. (1994) (295)
- Analysis of β-Subgroup Proteobacterial Ammonia Oxidizer Populations in Soil by Denaturing Gradient Gel Electrophoresis Analysis and Hierarchical Phylogenetic Probing (1998) (283)
- Trichomonas hydrogenosomes contain the NADH dehydrogenase module of mitochondrial complex I (2004) (271)
- Early branching eukaryotes? (1998) (263)
- Grassland Management Regimens Reduce Small-Scale Heterogeneity and Species Diversity of β-Proteobacterial Ammonia Oxidizer Populations (2002) (229)
- The linear PCR reaction: a simple and robust method for sequencing amplified rRNA genes (1991) (227)
- Phylogenetic Analyses of Diplomonad Genes Reveal Frequent Lateral Gene Transfers Affecting Eukaryotes (2003) (223)
- A novel route for ATP acquisition by the remnant mitochondria of Encephalitozoon cuniculi (2008) (222)
- Localization and functionality of microsporidian iron–sulphur cluster assembly proteins (2008) (215)
- Phylogenetic diversity of Archaea in sediment samples from a coastal salt marsh (1997) (206)
- Molecular analysis of enrichment cultures of marine ammonia oxidisers. (1994) (190)
- A mitochondrial Hsp70 orthologue in Vairimorpha necatrix: molecular evidence that microsporidia once contained mitochondria (1997) (189)
- Nitrogen Cycling and Community Structure of Proteobacterial β-Subgroup Ammonia-Oxidizing Bacteria within Polluted Marine Fish Farm Sediments (1999) (185)
- The use of rRNA sequences and fluorescent probes to investigate the phylogenetic positions of the anaerobic ciliate Metopus palaeformis and its archaeobacterial endosymbiont. (1992) (179)
- Links between ammonia oxidizer species composition, functional diversity and nitrification kinetics in grassland soils. (2005) (179)
- Primary succession of soil Crenarchaeota across a receding glacier foreland. (2005) (175)
- Integrative modeling of gene and genome evolution roots the archaeal tree of life (2017) (170)
- Multiple origins of anaerobic ciliates with hydrogenosomes within the radiation of aerobic ciliates (1995) (168)
- Rapid Extraction of DNA and rRNA from Sediments by a Novel Hydroxyapatite Spin-Column Method (1996) (167)
- Molecular data suggest an early acquisition of the mitochondrion endosymbiont (1996) (166)
- Structure and content of the Entamoeba histolytica genome. (2007) (166)
- Development, Life Cycle, Ultrastructure and Phylogenetic Position of Pasteuria ramosa Metchnikoff 1888: Rediscovery of an Obligate Endoparasite of Daphnia magna Straus (1996) (162)
- Conflicting Phylogenies for Early Land Plants are Caused by Composition Biases among Synonymous Substitutions (2014) (161)
- Mitochondria and hydrogenosomes are two forms of the same fundamental organelle. (2003) (158)
- Hydrogenosomes, Mitochondria and Early Eukaryotic Evolution (2003) (156)
- Analysis of the Sulfate-Reducing Bacterial and Methanogenic Archaeal Populations in Contrasting Antarctic Sediments (2003) (156)
- A phylogenetic analysis of the family Pseudonocardiaceae and the genera Actinokineospora and Saccharothrix with 16S rRNA sequences and a proposal to combine the genera Amycolata and Pseudonocardia in an emended genus Pseudonocardia. (1994) (152)
- A congruent phylogenomic signal places eukaryotes within the Archaea (2012) (149)
- Reverse transcriptase sequencing of 16S ribosomal RNA from Faenia rectivirgula, Pseudonocardia thermophila and Saccharopolyspora hirsuta, three wall type IV actinomycetes which lack mycolic acids. (1988) (148)
- Iron hydrogenases--ancient enzymes in modern eukaryotes. (2002) (147)
- Diversity and reductive evolution of mitochondria among microbial eukaryotes (2010) (145)
- Selective isolation of Renibacterium salmoninarum (1983) (144)
- Phylogenetic Differences between Particle-Associated and Planktonic Ammonia-Oxidizing Bacteria of the β Subdivision of the Class Proteobacteria in the Northwestern Mediterranean Sea (1999) (144)
- Phylogenomics provides robust support for a two-domains tree of life (2019) (131)
- The use of 16S ribosomal RNA analyses to investigate the phylogeny of the family Legionellaceae. (1991) (129)
- Of clades and clans: terms for phylogenetic relationships in unrooted trees. (2007) (129)
- A single eubacterial origin of eukaryotic pyruvate: ferredoxin oxidoreductase genes: implications for the evolution of anaerobic eukaryotes. (1999) (127)
- Iron hydrogenases and the evolution of anaerobic eukaryotes. (2000) (123)
- The Genome of the Obligate Intracellular Parasite Trachipleistophora hominis: New Insights into Microsporidian Genome Dynamics and Reductive Evolution (2012) (123)
- Isolation of haloarchaea that grow at low salinities. (2004) (119)
- Anaerobic eukaryote evolution: hydrogenosomes as biochemically modified mitochondria? (1997) (118)
- Cultivation-based and molecular approaches to characterisation of terrestrial and aquatic nitrifiers (2002) (116)
- Conserved properties of hydrogenosomal and mitochondrial ADP/ATP carriers: a common origin for both organelles (2002) (114)
- The primary divisions of life: a phylogenomic approach employing composition-heterogeneous methods (2009) (110)
- Multiple secondary origins of the anaerobic lifestyle in eukaryotes. (2006) (108)
- The diversity and evolution of thioredoxin reductase: new perspectives. (2002) (108)
- Recovery and phylogenetic analysis of novel archaeal rRNA sequences from a deep-sea deposit feeder (1995) (104)
- Reduction and Expansion in Microsporidian Genome Evolution: New Insights from Comparative Genomics (2013) (102)
- Phylogenetic relationships among karyorelictids and heterotrichs inferred from small subunit rRNA sequences: resolution at the base of the ciliate tree. (1995) (98)
- The use of small subunit rRNA sequences to unravel the relationships between anaerobic ciliates and their methanogen endosymbionts. (1994) (97)
- Archaeal “Dark Matter” and the Origin of Eukaryotes (2014) (93)
- Patterns of prokaryotic lateral gene transfers affecting parasitic microbial eukaryotes (2013) (90)
- Planctomycetes and eukaryotes: A case of analogy not homology (2011) (86)
- Horizontal gene transfer and the evolution of parasitic protozoa. (2003) (86)
- The SAR11 Group of Alpha-Proteobacteria Is Not Related to the Origin of Mitochondria (2012) (84)
- A Novel ADP/ATP Transporter in the Mitosome of the Microaerophilic Human Parasite Entamoeba histolytica (2005) (83)
- Comparison of the molecular diversity of the methanogenic community at the brackish and marine ends of a UK estuary. (2002) (78)
- Informational Gene Phylogenies Do Not Support a Fourth Domain of Life for Nucleocytoplasmic Large DNA Viruses (2011) (78)
- The Amitochondriate Eukaryote Trichomonas vaginalis Contains a Divergent Thioredoxin-linked Peroxiredoxin Antioxidant System* (2004) (78)
- Coupling of diversification and pH adaptation during the evolution of terrestrial Thaumarchaeota (2015) (75)
- Permeabilization of mycolic-acid-containing actinomycetes for in situ hybridization with fluorescently labelled oligonucleotide probes. (1994) (68)
- Plasma Membrane-Located Purine Nucleotide Transport Proteins Are Key Components for Host Exploitation by Microsporidian Intracellular Parasites (2014) (68)
- Use of 16S rRNA-targeted oligonucleotide probes to investigate the occurrence and selection of sulfate-reducing bacteria in response to nutrient addition to sediment slurry microcosms from a Japanese estuary (1997) (67)
- Cyclidium porcatum n. sp.: a Free-living anaerobic scuticociliate containing a stable complex of hydrogenosomes, eubacteria and archaeobacteria. (1993) (67)
- Chaperonin 60 phylogeny provides further evidence for secondary loss of mitochondria among putative early-branching eukaryotes. (2001) (65)
- A family of nuclear homing endonucleases. (1993) (65)
- Ultrastructural Description of Breviata anathema, N. Gen., N. Sp., the Organism Previously Studied as “Mastigamoeba invertens” (2006) (65)
- Reductive Evolution of the Mitochondrial Processing Peptidases of the Unicellular Parasites Trichomonas vaginalis and Giardia intestinalis (2008) (64)
- Unique phylogenetic relationships of glucokinase and glucosephosphate isomerase of the amitochondriate eukaryotes Giardia intestinalis, Spironucleus barkhanus and Trichomonas vaginalis. (2001) (63)
- Species Diversity of Uncultured and Cultured Populations of Soil and Marine Ammonia Oxidizing Bacteria (2001) (62)
- The distribution and activity of sulphate reducing bacteria in estuarine and coastal marine sediments (2002) (62)
- Inference of the phylogenetic position of oxymonads based on nine genes: support for metamonada and excavata. (2005) (62)
- Use of 16S rRNA-targeted oligonucleotide probes to investigate function and phylogeny of sulphate-reducing bacteria and methanogenic archaea in a UK estuary. (2003) (61)
- A mitochondrial‐like targeting signal on the hydrogenosomal malic enzyme from the anaerobic fungus Neocallimastix frontalis: support for the hypothesis that hydrogenosomes are modified mitochondria (1997) (60)
- Use of 16S rRNA-targeted oligonucleotide probes to investigate the distribution of sulphate-reducing bacteria in estuarine sediments. (2001) (60)
- A new polymorphic methanogen, closely related to Methanocorpusculum parvum, living in stable symbiosis within the anaerobic ciliate Trimyema sp. (1993) (58)
- Saccharopolyspora gregorii and Saccharopolyspora hordei: two new actinomycete species from fodder. (1989) (56)
- Horizontal gene transfer in eukaryotic parasites: a case study of Entamoeba histolytica and Trichomonas vaginalis. (2009) (55)
- Biodiversity at the molecular level: the domains, kingdoms and phyla of life. (1994) (55)
- Evolutionary conservation and in vitro reconstitution of microsporidian iron–sulfur cluster biosynthesis (2017) (55)
- Direct amplification and sequencing of the 16S ribosomal DNA of an intracellular Legionella species recovered by amoebal enrichment from the sputum of a patient with pneumonia. (1991) (55)
- New substitution models for rooting phylogenetic trees (2015) (54)
- Molecular evidence for the presence of novel actinomycete lineages in a temperate forest soil (1996) (53)
- The family Pseudonocardiaceae. (1992) (53)
- Microsporidia: Why Make Nucleotides if You Can Steal Them? (2016) (53)
- Transport proteins of parasitic protists and their role in nutrient salvage (2014) (50)
- Plastid establishment did not require a chlamydial partner (2015) (49)
- Systematic and morphological diversity of endosymbiotic methanogens in anaerobic ciliates (2004) (49)
- Evolutionary biology: Early evolution comes full circle (2004) (48)
- Compositional Biases among Synonymous Substitutions Cause Conflict between Gene and Protein Trees for Plastid Origins (2014) (47)
- Transporter gene acquisition and innovation in the evolution of Microsporidia intracellular parasites (2018) (46)
- Reduced thermophilic bias in the 16S rDNA sequence from Thermus ruber provides further support for a relationship between Thermus and Deinococcus (1993) (45)
- Lateral gene transfers and the origins of the eukaryote proteome: a view from microbial parasites (2015) (45)
- Evolution: Steps on the road to eukaryotes (2015) (45)
- Molecular evolution: A hydrogen-producing mitochondrion (1998) (44)
- New species double the diversity of anaerobic ciliates in a Spanish lake (1993) (44)
- Fructose-1,6-bisphosphate aldolases in amitochondriate protists constitute a single protein subfamily with eubacterial relationships. (2002) (43)
- Fungal hydrogenosomes contain mitochondrial heat-shock proteins. (2003) (41)
- Lactobacillus vaginalis sp. nov. from the human vagina (1989) (41)
- Frataxin, a Conserved Mitochondrial Protein, in the Hydrogenosome of Trichomonas vaginalis (2007) (41)
- Naegleria nucleolar introns contain two group I ribozymes with different functions in RNA splicing and processing. (1997) (40)
- Chemotaxonomy of Wall Type IV Actinomycetes Which Lack Mycolic Acids (1988) (40)
- Lipid and Cell Wall Amino Acid Composition in the Classification of Members of the Genus Deinococcus (1987) (40)
- The phylogenetic position of Pseudoamycolata halophobica (Akimov et al. 1989) and a proposal to reclassify it as Pseudonocardia halophobica. (1994) (38)
- Numerical Taxonomy and Emended Description of Renibacterium salmoninarum (1985) (37)
- Fatty acid composition in the classification of Saccharopolyspora hirsuta (1987) (37)
- Differential remodelling of peroxisome function underpins the environmental and metabolic adaptability of diplonemids and kinetoplastids (2016) (35)
- A novel potential surface protein in Trichomonas vaginalis contains a leucine-rich repeat shared by micro-organisms from all three domains of life. (2002) (35)
- An [Fe] hydrogenase from the anaerobic hydrogenosome-containing fungus Neocallimastix frontalis L2. (2002) (34)
- Transcriptomic profiling of host-parasite interactions in the microsporidian Trachipleistophora hominis (2015) (33)
- Physical stabilization and confocal microscopy of bacteria on roots using 16S rRNA targeted, fluorescent-labeled oligonucleotide probes (1996) (32)
- RNA sequence analysis shows that the symbionts in the ciliate Metopus contortus are polymorphs of a single methanogen species. (1992) (32)
- PHYLOGENETIC ANALYSIS OF AZOSPIRILLUM BY DIRECT SEQUENCING OF PCR AMPLIFIED 16S RDNA (1994) (32)
- Fatty acid, isoprenoid quinone and polar lipid composition in the classification of Renibacterium salmoninarum (1983) (28)
- RNA sequence analysis shows that the symbionts in the ciliate Metopus contortus are polymorphs of a single methanogen species (1992) (28)
- Phylogenetic Diversity of NTT Nucleotide Transport Proteins in Free-Living and Parasitic Bacteria and Eukaryotes (2017) (27)
- Convergent Evolution of Hydrogenosomes from Mitochondria by Gene Transfer and Loss (2019) (26)
- Changing ideas about eukaryotic origins (2015) (26)
- The Phylogeny of Amycolata autotrophica, Kibdelosporangium aridum and Saccharothrix australiensis (1989) (25)
- Introduction: how and when did microbes change the world? (2006) (25)
- A semi-defined growth medium for Renibacterium salmoninarum (1982) (24)
- Sulphate reduction, methanogenesis and phylogenetics of the sulphate reducing bacterial communities along an estuarine gradient (2004) (23)
- Diversity of Uncultured Microorganisms in the Environment (2000) (21)
- Genomes of two archaeal endosymbionts show convergent adaptations to an intracellular lifestyle (2018) (20)
- Lipid and wall amino acid composition in the classification of Rothia dentocariosa. (1984) (18)
- Hydrogenosomal succinyl-CoA synthetase from the rumen-dwelling fungus Neocallimastix patriciarum; an energy-producing enzyme of mitochondrial origin. (2006) (17)
- Bayesian modelling of compositional heterogeneity in molecular phylogenetics (2014) (17)
- Morphology and Phylogeny of a New Species of Anaerobic Ciliate, Trimyema finlayi n. sp., with Endosymbiotic Methanogens (2018) (16)
- Use of the PCR and fluorescent probes to recover SSU rRNA gene sequences from single cells of the ciliate protozoon Spathidiutn (1995) (16)
- A group I intron in the small subunit ribosomal RNA gene from Naegleria andersoni ssp. andersoni strain PPMFB-6. (1992) (14)
- A new family of cell surface located purine transporters in Microsporidia and related fungal endoparasites (2019) (14)
- Resculpting the binding pocket of APC superfamily LeuT-fold amino acid transporters (2017) (14)
- Inferring the Deep Past from Molecular Data (2021) (13)
- The Effect of Nonreversibility on Inferring Rooted Phylogenies (2015) (12)
- Molecular and cellular evolution of ciliates: a phylogenetic perspective (1998) (12)
- A Recent Whole-Genome Duplication Divides Populations of a Globally Distributed Microsporidian (2016) (10)
- MICROBIAL DIVERSITY: Domains and Kingdoms (1996) (10)
- Biochemical and genetic evidence for a family of heterotrimeric G-proteins in Trichomonas vaginalis. (2003) (10)
- Sediments by a Novel Hydroxyapatite Rapid Extraction of DNA and rRNA from (1996) (9)
- Polluted Marine Fish Farm Sediments Ammonia-Oxidizing Bacteria within -Subgroup β of Proteobacterial Nitrogen Cycling and Community Structure (2013) (6)
- International Criminal Court (ICC) statute and implementation of the Geneva Conventions (2011) (3)
- Recoding amino acids to a reduced alphabet may increase or decrease phylogenetic accuracy. (2022) (3)
- Anaerobic eukaryotes and their archaebacterial endosymbionts. (2002) (3)
- Commonwealth Law Bulletin (2006) (3)
- Phylogenomics provides robust support for a two-domains tree of life (2019) (2)
- The influence of selection pressures on species diversity, functional gene diversity and activity of ammonia oxidising bacteria (2002) (2)
- Phylogenetic Diversity of Methanogen Endosymbionts of Anaerobic Ciliates (1994) (2)
- Molecular phylogeny of Trichomonas and Naegleria: implications for the relative timing of the mitochondrion endosymbiosis. (1998) (2)
- Analysis of the Sulfate-Reducing Bacterial and Methanogenic Archaeal Populations in Contrasting Antarctic Sediments (2006) (2)
- Isoprenoid quinone and polar lipid composition of Leptospiraceae (1987) (1)
- Massive differential expansion of the Trichomonas vaginalis adaptin genomic complement (2005) (1)
- Golgi-associated genes in the oxymonad Monocercomonoides sp suggest the presence of a cryptic organelle. (2007) (1)
- SYSTEMATICS OF THE ACTINOMYCETES (1994) (1)
- Incorporating compositional heterogeneity into Lie Markov models for phylogenetic inference (2020) (1)
- Trypanosoma brucei The Genome of the African Trypanosome (2007) (1)
- Transporter gene acquisition and innovation in the evolution of Microsporidia intracellular parasites (2018) (0)
- Author Correction: Phylogenomics provides robust support for a two-domains tree of life (2020) (0)
- Alternative Sentencing in Small Commonwealth Jurisdictions: Panacea or Placebo? (2008) (0)
- Company City Date Trained Certification Expires (2016) (0)
- University of Groningen Conserved properties of hydrogenosomal and mitochondrial ADP/ATP carriers Giezen, (2018) (0)
- Resculpting the binding pocket of APC superfamily LeuT-fold amino acid transporters (2017) (0)
- Not the most basal eukaryotes: challenges and pitfalls affecting the placement of Giardia and Trichomonas (2005) (0)
- It Took Me a While to Figure out What Science I Really Wanted to Do (2022) (0)
- Issues Regarding Freedom of Information Legislation for Small States - Policy Paper (2008) (0)
- Multiple origins of anaerobic eukaryotes contemporary anaerobic life is most rich in the vicinity of aerobic life ( Fenchel (2006) (0)
- Genomes of two archaeal endosymbionts show convergent adaptations to an intracellular lifestyle (2018) (0)
- Transcriptomic profiling of host-parasite interactions in the microsporidian Trachipleistophora hominis (2015) (0)
- Implementing International Environment Instruments in Small States (2008) (0)
- Research letterSelective isolation of Renibacterium salmoninarum (1983) (0)
- Inhibition of mitosomal alternative oxidase causes lifecycle arrest of early-stage Trachipleistophora hominis meronts during intracellular infection of mammalian cells (2022) (0)
- Human Rights Issues: Promoting Ratification of the International Covenant on Civil and Political Rights and the International Covenant on Economic Social and Cultural Rights (2008) (0)
- Strategies to Combat Corruption (2008) (0)
- Only two domains, not three (2016) (0)
- Commonwealth Anti-corruption Project: Conflict of Interest (2008) (0)
- Patterns of prokaryotic lateral gene transfers affecting parasitic microbial eukaryotes (2013) (0)
- Criminal Jurisdiction: Is it Wide Enough? (2008) (0)
- Generalizing rate heterogeneity across sites in statistical phylogenetics (2017) (0)
- family cell surface located purine transporters in Microsporidia and related fungal endoparasites. (2019) (0)
- Stealing is the Deal: Parasites that grow within animal cells use a family of transport proteins to take nucleotides, the building blocks of DNA, from their hosts. (2019) (0)
- Use and Role of Joint Investigation Teams in Combating Serious Crime (2008) (0)
- New Zygnematophycean chloroplast genomes provide further support for the sister relationship of land plants and conjugating algae (2013) (0)
- Autotrophic Ammonia-Oxidizing Bacteria in Stratified Eutrophic Lakes: Development of Ribosomal RNA-Directed Oligonucleotide Probes (1992) (0)
- Only two domains, not three: Changing views on the tree of life (2016) (0)
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