Mike Steel

Q: What Schools Are Affiliated With Mike Steel

Mike Steel is affiliated with the following schools: Massey University, University of Canterbury, Victoria University of Wellington, University of Waikato, University of Virginia, Technical University of Munich, University of Auckland, University of New Zealand, Leiden University

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Mike Steel

Mathematics

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Measure Theory

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Mathematics

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According to Wikipedia, Michael Anthony Steel is a New Zealand mathematician and statistician, a Distinguished Professor of mathematics and statistics and the Director of the Biomathematics Research Centre at the University of Canterbury in Christchurch, New Zealand. He is known for his research on modeling and reconstructing evolutionary trees.

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Mike Steel 's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Recovering evolutionary trees under a more realistic model of sequence evolution. (1994) (1011)
The complexity of reconstructing trees from qualitative characters and subtrees (1992) (509)
Subtree Transfer Operations and Their Induced Metrics on Evolutionary Trees (2001) (355)
Distributions of Tree Comparison Metrics—Some New Results (1993) (331)
A genome phylogeny for mitochondria among alpha-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes. (2004) (325)
Parsimony, likelihood, and the role of models in molecular phylogenetics. (2000) (294)
Recovering a tree from the leaf colourations it generates under a Markov model (1994) (292)
Neighbor-joining revealed. (2006) (276)
The (Super)Tree of Life: Procedures, Problems, and Prospects (2002) (269)
Modeling the covarion hypothesis of nucleotide substitution. (1998) (261)
Phylogeny - discrete and random processes in evolution (2016) (254)
Evolution of chlorophyll and bacteriochlorophyll: the problem of invariant sites in sequence analysis. (1996) (242)
Links between maximum likelihood and maximum parsimony under a simple model of site substitution. (1997) (239)
General time-reversible distances with unequal rates across sites: mixing gamma and inverse Gaussian distributions with invariant sites. (1997) (225)
A supertree method for rooted trees (2000) (210)
Acquisition of 1,000 eubacterial genes physiologically transformed a methanogen at the origin of Haloarchaea (2012) (208)
Detecting autocatalytic, self-sustaining sets in chemical reaction systems. (2004) (200)
Likelihood-based tree reconstruction on a concatenation of aligned sequence data sets can be statistically inconsistent. (2015) (199)
The influence of rate heterogeneity among sites on the time dependence of molecular rates. (2012) (195)
Networks: expanding evolutionary thinking. (2013) (192)
Confidence in evolutionary trees from biological sequence data (1993) (187)
A few logs suffice to build (almost) all trees (l): part I (1997) (186)
Distributions of cherries for two models of trees. (2000) (182)
A Few Logs Suffice to Build (almost) All Trees: Part II (1999) (173)
A few logs suffice to build (almost) all trees (I) (1999) (164)
Properties of phylogenetic trees generated by Yule-type speciation models. (2001) (163)
Progress with methods for constructing evolutionary trees. (1992) (152)
Should phylogenetic models be trying to "fit an elephant"? (2005) (147)
A covariotide model explains apparent phylogenetic structure of oxygenic photosynthetic lineages. (1998) (144)
Phylogenetic super-networks from partial trees (2004) (138)
Autocatalytic Sets and the Origin of Life (2010) (137)
Maximum likelihood supertrees. (2007) (134)
Kaikoura Tree Theorems: Computing the Maximum Agreement Subtree (1993) (130)
Phylogenomics with incomplete taxon coverage: the limits to inference (2010) (123)
Extension Operations on Sets of Leaf-Labeled Trees (1995) (122)
Reconstruction of Reticulate Networks from Gene Trees (2005) (122)
A Framework for Representing Reticulate Evolution (2005) (119)
The Structure of Autocatalytic Sets: Evolvability, Enablement, and Emergence (2012) (116)
Random biochemical networks: the probability of self-sustaining autocatalysis. (2005) (113)
Terraces in Phylogenetic Tree Space (2011) (112)
Phylogenetic trees based on gene content (2004) (111)
Which Phylogenetic Networks are Merely Trees with Additional Arcs? (2015) (110)
Simple but fundamental limitations on supertree and consensus tree methods. (2000) (108)
Hybrids in real time. (2006) (107)
A discrete Fourier analysis for evolutionary trees. (1994) (104)
Reconstructing evolution : new mathematical and computational advances (2007) (103)
Phylogenetic diversity and the greedy algorithm. (2005) (102)
Metrics on RNA Secondary Structures (2000) (101)
Hybridization may facilitate in situ survival of endemic species through periods of climate change (2013) (97)
Required Levels of Catalysis for Emergence of Autocatalytic Sets in Models of Chemical Reaction Systems (2011) (95)
The Maximum Likelihood Point for a Phylogenetic Tree is Not Unique (1994) (92)
Reconstructing Trees When Sequence Sites Evolve at Variable Rates (1994) (92)
Invariable sites models and their use in phylogeny reconstruction. (2000) (87)
Locating a tree in a phylogenetic network (2010) (87)
Bayesian Phylogenetic Estimation of Clade Ages Supports Trans‐Atlantic Dispersal of Cichlid Fishes (2016) (82)
The emergence of a self-catalysing structure in abstract origin-of-life models (2000) (80)
Improved analyses of human mtDNA sequences support a recent African origin for Homo sapiens. (1995) (80)
Phylogenetic mixtures on a single tree can mimic a tree of another topology. (2007) (78)
Testing the hypothesis of common ancestry. (2002) (78)
Fourier Calculus on Evolutionary Trees (1993) (76)
Chasing the tail: The emergence of autocatalytic networks (2017) (75)
Cyclic permutations and evolutionary trees (2004) (73)
Autocatalytic chemical networks at the origin of metabolism (2020) (72)
More taxa are not necessarily better for the reconstruction of ancestral character states. (2008) (70)
Hedging Our Bets: The Expected Contribution of Species to Future Phylogenetic Diversity (2007) (68)
Age-Dependent Speciation Can Explain the Shape of Empirical Phylogenies (2015) (67)
A complete family of phylogenetic invariants for any number of taxa under Kimura's 3ST model (1993) (67)
Autocatalytic sets in E. coli metabolism (2015) (67)
How much can evolved characters tell us about the tree that generated them? (2004) (66)
A phase transition for a random cluster model on phylogenetic trees. (2004) (65)
Links between maximum likelihood and maximum parsimony under a simple model of site substitution (1997) (63)
Constructing Optimal Trees from Quartets (2001) (62)
Branch lengths on birth-death trees and the expected loss of phylogenetic diversity. (2010) (62)
Convex tree realizations of partitions (1992) (60)
Inverting Random Functions II: Explicit Bounds for Discrete Maximum Likelihood Estimation, with Applications (2002) (59)
Parsimony Can Be Consistent (1993) (56)
Maximizing phylogenetic diversity in biodiversity conservation: Greedy solutions to the Noah's Ark problem. (2006) (53)
Loss of information in genetic distances (1988) (52)
A formal model of autocatalytic sets emerging in an RNA replicator system (2012) (52)
Constructing Big Trees from Short Sequences (1997) (50)
Stochastic properties of generalised Yule models, with biodiversity applications (2008) (49)
Phylogenetic Supertrees (2004) (48)
Distribution of branch lengths and phylogenetic diversity under homogeneous speciation models. (2011) (47)
A tale of two processes. (2005) (47)
Inverting random functions (1999) (46)
Computing the Distribution of a Tree Metric (2008) (46)
How molecules evolve in eubacteria. (2000) (46)
Autocatalytic networks in cognition and the origin of culture. (2017) (44)
Reconstructing Phylogenies From Nucleotide Pattern Probabilities: A Survey and some New Results (1998) (43)
Optimizing phylogenetic diversity under constraints. (2007) (43)
Characterizing phylogenetically decisive taxon coverage (2009) (43)
Algorithmic Aspects of Tree Amalgamation (2000) (43)
Classifying and Counting Linear Phylogenetic Invariants for the Jukes-Cantor Model (1995) (42)
Impacts of Terraces on Phylogenetic Inference. (2014) (41)
The expected length of pendant and interior edges of a Yule tree (2009) (41)
Applying the Thorne-Kishino-Felsenstein model to sequence evolution on a star-shaped tree (2001) (40)
Minimal autocatalytic networks. (2012) (40)
Mixed-up Trees: the Structure of Phylogenetic Mixtures (2007) (39)
Autocatalytic sets and chemical organizations: modeling self-sustaining reaction networks at the origin of life (2018) (39)
Symmetric Matrices Representable by Weighted Trees Over a Cancellative Abelian Monoid (1995) (39)
Peeling phylogenetic 'oranges' (2004) (38)
Autocatalytic sets in a partitioned biochemical network (2013) (38)
Better methods for solving parsimony and compatibility (1998) (36)
SPECTRAL ANALYSIS AND A CLOSEST TREE METHOD FOR GENETIC SEQUENCES (1992) (36)
Tree Reconstruction from Multi-State Characters (2002) (35)
Conditions for Evolvability of Autocatalytic Sets: A Formal Example and Analysis (2014) (35)
Maximum parsimony and the phylogenetic information in multistate characters (2006) (35)
Species, clusters and the 'Tree of life': a graph-theoretic perspective. (2009) (35)
The Bayesian "star paradox" persists for long finite sequences. (2006) (35)
Confidence Intervals for the Divergence Time of Two Clades (1996) (34)
Five surprising properties of parsimoniously colored trees (1995) (34)
Retractions of Finite Distance Functions Onto Tree Metrics (1999) (34)
Difficulties in testing for covarion-like properties of sequences under the confounding influence of changing proportions of variable sites. (2008) (34)
Predicting the ancestral character changes in a tree is typically easier than predicting the root state. (2013) (33)
Autocatalytic networks in biology: structural theory and algorithms (2019) (33)
Autocatalytic Networks at the Basis of Life’s Origin and Organization (2018) (33)
Two further links between MP and ML under the poisson model (2004) (33)
Folding and unfolding phylogenetic trees and networks (2015) (33)
Trees from Languages and Genes are Very Similar (1993) (33)
Origins of life: Common ancestry put to the test (2010) (33)
Local Quartet Splits of a Binary Tree Infer All Quartet Splits Via One Dyadic Inference Rule (1996) (32)
Can We “Future‐Proof” Consensus Trees?† (2016) (32)
Pure adaptive search for finite global optimization (1995) (32)
Circumstances in Which Parsimony but not Compatibility will be Provably Misleading (2014) (32)
Distribution of phylogenetic diversity under random extinction. (2007) (31)
Distribution of the Symmetric Difference Metric on Phylogenetic Trees (1988) (31)
Reconstructing pedigrees: a combinatorial perspective. (2006) (31)
Corrected Parsimony, Minimum Evolution, and Hadamard Conjugations (1996) (30)
Autocatalytic sets and boundaries (2015) (30)
Filtered Z-closure supernetworks for extracting and visualizing recurrent signal from incongruent gene trees. (2008) (29)
Reconstructing pedigrees: a stochastic perspective. (2007) (29)
Distributions on bicoloured evolutionary trees (1990) (29)
Finding a Maximum Compatible Tree is NP-Hard for Sequences and Trees (1996) (29)
Sequence length bounds for resolving a deep phylogenetic divergence. (2008) (28)
Autocatalytic Sets and Biological Specificity (2013) (28)
Distributions on Bicoloured Binary Trees Arising from the Principle of Parsimony (1993) (28)
Patching Up X-Trees (1999) (28)
Phylogenetic diversity: from combinatorics to ecology (2007) (27)
New characterisations of tree-based networks and proximity measures (2016) (26)
Algorithms for detecting and analysing autocatalytic sets (2015) (26)
Autocatalytic sets extended: Dynamics, inhibition, and a generalization (2012) (26)
Closure operations in phylogenetics. (2007) (26)
Inferring ancestral sequences in taxon-rich phylogenies. (2010) (26)
Predicting template-based catalysis rates in a simple catalytic reaction model. (2011) (26)
A class of phylogenetic networks reconstructable from ancestral profiles. (2019) (26)
Unicyclic networks: compatibility and enumeration (2006) (26)
Trees, Taxonomy, and Strongly Compatible Multi-state Characters (1997) (26)
The complexity of the median procedure for binary trees (1994) (25)
Supertree algorithms for ancestral divergence dates and nested taxa (2004) (25)
The size of a maximum agreement subtree for random binary trees (2001) (25)
Four Characters Suffice to Convexly Define a Phylogenetic Tree (2005) (24)
Reducing Distortion in Phylogenetic Networks (2006) (24)
Significance of the length of the shortest tree (1992) (22)
Supertree Methods for Ancestral Divergence Dates and other Applications (2004) (22)
Clades, clans, and reciprocal monophyly under neutral evolutionary models. (2011) (22)
Predicting the loss of phylogenetic diversity under non-stationary diversification models. (2013) (21)
Identifying a species tree subject to random lateral gene transfer. (2012) (21)
A basic limitation on inferring phylogenies by pairwise sequence comparisons. (2008) (21)
A regular decomposition of the edge-product space of phylogenetic trees (2008) (21)
A frequency-dependent significance test for parsimony. (1995) (20)
The existence and abundance of ghost ancestors in biparental populations. (2014) (20)
Some statistical aspects of the maximum parsimony method. (2002) (20)
Molecular Diversity Required for the Formation of Autocatalytic Sets (2019) (19)
On the impossibility of uniform priors on clades. (2006) (19)
Time and Knowability in Evolutionary Processes (2013) (19)
Tree Reconstruction via a Closure Operation on Partial Splits (2000) (19)
Can we avoid "SIN" in the house of "no common mechanism"? (2009) (19)
Likelihood-based tree reconstruction on a concatenation of alignments can be positively misleading (2014) (19)
LETTER TO THE EDITOR: U(1) × U(1) × U(1) symmetry of the Kimura 3ST model and phylogenetic branching processes (2003) (18)
Distances that perfectly mislead. (2004) (17)
‘Lassoing’ a phylogenetic tree I: basic properties, shellings, and covers (2011) (17)
Autocatalytic sets in polymer networks with variable catalysis distributions (2016) (17)
The Difficulty of Constructing a Leaf-labelled Tree Including or Avoiding Given Subtrees (2000) (16)
A characterization for a set of partial partitions to define an X-tree (2002) (16)
The ‘Butterfly effect’ in Cayley graphs with applications to genomics (2012) (16)
Consistency of Bayesian inference of resolved phylogenetic trees. (2010) (15)
Tree-based networks: characterisations, metrics, and support trees (2017) (14)
Tools to Construct and Study Big Trees: A Mathematical Perspective (2006) (14)
Bounds on the Expected Size of the Maximum Agreement Subtree (2014) (14)
Phylogenetic Diversity Over an Abelian Group (2007) (14)
Dynamics of a birth-death process based on combinatorial innovation. (2019) (14)
Modeling a Cognitive Transition at the Origin of Cultural Evolution Using Autocatalytic Networks (2020) (14)
Axiomatic opportunities and obstacles for inferring a species tree from gene trees. (2014) (13)
Fast algorithms for constructing optimal trees from quartets (1999) (13)
Majority rule has transition ratio 4 on Yule trees under a 2-state symmetric model. (2014) (13)
The Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing edited by LEMEY, P., SALEMI, M., and VANDAMME, A.‐M. (2010) (12)
Screening-Off and Causal Incompleteness: A No-Go Theorem (2013) (12)
Combinatorial and stochastic properties of ranked tree‐child networks (2020) (12)
A Darwinian Uncertainty Principle (2018) (12)
An improved bound on the maximum agreement subtree problem (2009) (12)
Comparing strategies to preserve evolutionary diversity. (2010) (11)
Root location in random trees: a polarity property of all sampling consistent phylogenetic models except one. (2012) (11)
Markovian log-supermodularity, and its applications in phylogenetics (2008) (11)
On the variational distance of two trees (2006) (11)
Autocatalytic chemical networks preceded proteins and RNA in evolution (2019) (11)
A Few Logs Suuce to Build Almost All Trees Ii (1997) (11)
The Short Quartet Method (1998) (10)
A FOURIER INVERSION FORMULA FOR EVOLUTIONARY TREES (1993) (10)
Accuracy in near-perfect virus phylogenies (2021) (10)
Patching upX-trees (1999) (10)
Tree-like reticulation networks--when do tree-like distances also support reticulate evolution? (2014) (10)
Tracing Evolutionary Links between Species (2014) (10)
A model of the transition to behavioural and cognitive modernity using reflexively autocatalytic networks (2020) (10)
The "shape" of phylogenies under simple random speciation models (2002) (10)
Phylogenetic Closure Operations and Homoplasy-Free Evolution (2004) (10)
Decompositions of Leaf-Colored Binary Trees (1993) (10)
Bayesian Node Dating based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes (2016) (10)
The optimal rate for resolving a near-polytomy in a phylogeny. (2016) (10)
Swapping Birth and Death: Symmetries and Transformations in Phylodynamic Models (2018) (10)
Twisted trees and inconsistency of tree estimation when gaps are treated as missing data - The impact of model mis-specification in distance corrections. (2015) (10)
Inverting Random Functions III: Discrete MLE Revisited (2006) (9)
Estimating the Relative Order of Speciation or Coalescence Events on a Given Phylogeny (2006) (9)
Teasing Apart Two Trees (2007) (9)
An evolutionary process without variation and selection (2021) (9)
Entropy increase and information loss in Markov models of evolution (2011) (9)
A ‘Stochastic Safety Radius’ for Distance-Based Tree Reconstruction (2014) (9)
Points of View Simple but Fundamental Limitations on Supertree and Consensus Tree Methods (2000) (9)
Evolutionary isolation and phylogenetic diversity loss under random extinction events. (2018) (9)
Mapping Edge Sets to Splits in Trees: the Path Index and Parsimony (2006) (8)
Bounds on absorption times of directionally biased random sequences (1996) (8)
Modelling the unpredictability of future biodiversity in ecological networks. (2010) (8)
The impact and interplay of long and short branches on phylogenetic information content. (2012) (8)
Recovering a phylogenetic tree using pairwise closure operations (2005) (8)
A central limit theorem for the parsimony length of trees (1996) (8)
Refining Phylogenetic Trees Given Additional Data: An Algorithm Based on Parsimony (2009) (7)
Accumulation Phylogenies (2006) (7)
Reconstructing fully-resolved trees from triplet cover distances (2012) (7)
Distributions on bicoloured evolutionary trees : a thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Mathematics at Massey University (1989) (7)
A Hall-type theorem for triplet set systems based on medians in trees (2009) (7)
Hide and seek: placing and finding an optimal tree for thousands of homoplasy-rich sequences. (2013) (7)
The number of nucleotide sites needed to accurately reconstructlarge evolutionary trees (1996) (7)
Trait-Dependent Extinction Leads to Greater Expected Biodiversity Loss (2009) (7)
Self-sustaining autocatalytic networks within open-ended reaction systems (2015) (7)
The structure of autocatalytic networks, with application to early biochemistry (2020) (6)
Defining phylogenetic networks using ancestral profiles. (2020) (6)
The Origin of Life, Evolution, and Functional Organization (2013) (6)
Tree Representations of Non-symmetric Group-Valued Proximities (1999) (6)
Shrinkage Effect in Ancestral Maximum Likelihood (2008) (6)
Does random tree puzzle produce Yule-Harding trees in the many-taxon limit? (2013) (6)
Reflections on the extinction-explosion dichotomy. (2014) (6)
Dissimilarity maps and substitution models: Some new results (1996) (5)
The Combinatorics of Evolutionary Trees-a Survey (1992) (5)
Normalising phylogenetic networks. (2020) (5)
An Autocatalytic Network Model of Conceptual Change (2021) (5)
Phylogenetic information complexity: is testing a tree easier than finding it? (2008) (5)
Estimating phylogenetic trees from pairwise likelihoods and posterior probabilities of substitution counts. (2011) (4)
Combinatorial properties of phylogenetic diversity indices (2019) (4)
Similarities as Evidence for Common Ancestry: A Likelihood Epistemology (2015) (4)
Conditions under which distributions of edge length ratios on phylogenetic trees can be used to order evolutionary events (2021) (4)
Autocatalytic sets in a partitioned biochemical (2014) (4)
Tree Reconstruction from Triplet Cover Distances (2014) (4)
A LIMITING THEOREM FOR PARSIMONIOUSLY BICOLOURED TREES (1993) (4)
Quantifying the accuracy of ancestral state prediction in a phylogenetic tree under maximum parsimony (2018) (4)
A matroid associated with a phylogenetic tree (2013) (4)
Neighborhoods of Phylogenetic Trees: Exact and Asymptotic Counts (2015) (4)
Branch lengths on Yule trees and the expected loss of phylogenetic diversity (2010) (3)
From Uncertainty to Insight: An Autocatalytic Framework (2020) (3)
Sufficient Conditions for Two Tree Reconstruction Techniques to Succeed on Sufficiently Long Sequences (2001) (3)
Formal Links between Feature Diversity and Phylogenetic Diversity (2020) (3)
The Length of a Leaf Coloration on a Random Binary Tree (1997) (3)
A Model of the Transition to Behavioral and Cognitive Modernity using Reflexively Autocatalytic Networks (2020) (3)
Phylogenetic Flexibility via Hall-Type Inequalities and Submodularity (2017) (3)
Identifying X-Trees with Few Characters (2006) (3)
Bayesian Phylogenetic Estimation of Clade Ages Supports Trans-Atlantic Dispersal of Cichlid Fishes. (2016) (3)
A simple statistical test of taxonomic or functional homogeneity using replicated microbiome sequencing samples. (2017) (3)
Approximating likelihoods under low but variable rates across sites (1999) (3)
Autocatalytic Sets Arising in a Combinatorial Model of Chemical Evolution (2022) (3)
A navigation system for tree space (2016) (3)
Chapter 1: Phylogeny (2016) (2)
Horizontal Gene Transfer Phylogenetics: A Random Walk Approach. (2019) (2)
The combinatorics of reconstructing evolutionary trees (1992) (2)
Dissimilarity maps and substitution models (1997) (2)
Phylogenetic mixtures and linear invariants for equal input models (2016) (2)
Trends in Ecology and Evolution (1992) (2)
How probable is common ancestry according to different evolutionary processes? (2015) (2)
Phylogenetic Biodiversity Metrics Should Account for Both Accumulation and Attrition of Evolutionary Heritage (2022) (2)
'Bureaucratic' set systems, and their role in phylogenetics (2011) (2)
The EDGE2 protocol: Advancing the prioritisation of Evolutionarily Distinct and Globally Endangered species for practical conservation action (2023) (2)
The standard lateral gene transfer model is statistically consistent for pectinate four-taxon trees. (2013) (2)
Conditions under which distributions of edge length ratios on phylogenetic trees can be used to order evolutionary events. (2021) (2)
The most parsimonious tree for random data. (2014) (2)
Expected Anomalies in the Fossil Record (2007) (2)
Do tree split probabilities determine the branch lengths? (2015) (2)
EDGE2: advancing the prioritisation of threatened evolutionary history for conservation action (2022) (2)
Special Section: Phylogenetics (2009) (2)
On the information content of discrete phylogenetic characters (2017) (2)
On a problem of Andersson and Perlman (1993) (2)
Complexity results for autocatalytic network models. (2020) (1)
Running Title: AGE-DEPENDENT SPECIATION (2015) (1)
Maximum Likelihood Supertrees Maximum Likelihood (2008) (1)
A CONSISTENCY LEMMA IN STATISTICAL PHYLOGENETICS (2015) (1)
A note on random catalytic branching processes. (2018) (1)
Mathematical Aspects of the ‘Tree of Life’ (2009) (1)
Terraces in Gene Tree Reconciliation-Based Species Tree Inference (2020) (1)
Logarithmic bounds on the posterior divergence time of two sequences (2010) (1)
Expected Anomolies in the Fossil Record (2008) (1)
The Probability of Joint Monophyly of Samples of Gene Lineages for All Species in an Arbitrary Species Tree (2022) (1)
Minimum triplet covers of binary phylogenetic X-trees (2016) (1)
Chapter 4: Pulling trees apart and putting trees together (2016) (1)
Detecting reticulate evolution using distance measures (2014) (1)
The Expected Number of Viable Autocatalytic Sets in Chemical Reaction Systems (2020) (1)
Counting Ancestral Reconstructions in a Fixed Phylogeny (2008) (1)
Better methods for solving parsimony and compatibility. (1998) (1)
Combinatorial properties of triplet covers for binary trees (2017) (1)
Chapter 6: Continuous phylogenies and distance-based tree reconstruction (2016) (1)
Tractable models of self-sustaining autocatalytic networks (2018) (1)
Dynamics of a combinatorial birth-death process based on the 'adjacent possible' (2019) (1)
Lambert and Stadler (2013): A unifying framework for modelling evolutionary trees. (2020) (1)
Comment on "Tibor Gánti and Robert Rosen" by Athel Cornish-Bowden. (2016) (1)
Formal Links between Feature Diversity and Phylogenetic Diversity. (2020) (1)
Probabilities of evolutionary trees under a rate-varying model of speciation (1998) (1)
On the information content of discrete phylogenetic characters (2017) (1)
Quantifying the Extent of Lateral Gene Transfer Required to Avert a ‘Genome of Eden’ (2009) (0)
Labellable Phylogenetic Networks (2023) (0)
Minimum triplet covers of binary phylogenetic X-trees (2017) (0)
The 'Butterfly effect' in Cayley graphs, and its relevance for evolutionary genomics (2011) (0)
Chapter 10: Introduction to phylogenetic networks (2016) (0)
Quantifying the accuracy of ancestral state prediction in a phylogenetic tree under maximum parsimony (2019) (0)
Tree-based networks: characterisations, metrics, and support trees (2018) (0)
Anti-consensus: detecting trees that have an evolutionary signal that is lost in consensus (2019) (0)
Information Accumulation and Loss as a Foundation for Sound Phylogenetic Biodiversity Metrics (2022) (0)
Chapter 2: Basic combinatorics of discrete phylogenies (2016) (0)
Combinatorial results for network-based models of metabolic origins (2019) (0)
Predicting long pendant edges in model phylogenies, with applications to biodiversity and tree inference (2021) (0)
Capturing a phylogenetic tree when the number of character states varies with the number of leaves (2015) (0)
Combinatorial properties of phylogenetic diversity indices for rooted and unrooted trees (2019) (0)
Modelling aspects of consciousness: a topological perspective (2020) (0)
Biodiversity conservation and evolutionary models (2008) (0)
Four characters suffice (2003) (0)
Chapter 5: Phylogenies based on discrete characters (2016) (0)
Phylogenetic mixtures and linear invariants for equal input models (2016) (0)
Inferring phylogenies : an epic worth the wait (2004) (0)
Species notions that combine phylogenetic trees and phenotypic partitions (2017) (0)
Chapter 7: Evolution on a tree: Part one (2016) (0)
Random graph models in phylogenetics (2016) (0)
Chapter 9: Evolution of trees (2016) (0)
Supplementary Methods, Figures and Tables from Autocatalytic chemical networks at the origin of metabolism (2020) (0)
RH : BAYESIAN ESTIMATION OF CLADE AGES 2 Bayesian Phylogenetic Estimation of Clade Ages 3 Supports Trans-Atlantic Dispersal of Cichlid Fishes (2016) (0)
On approximation of optimizing phylogenetic diversity for cluster systems (2009) (0)
Phylogenetic signal, phase translations and limits to resolving deep divergences (2004) (0)
Inverting random functions II: explicit bounds for parametric and non-parametric MLE, with applicati (1999) (0)
Random autocatalytic networks (2004) (0)
Tree split probabilities determine the branch lengths (2013) (0)
Chapter 8: Evolution on a tree: Part two (2016) (0)
Spaces of phylogenetic diversity indices: combinatorial and geometric properties (2023) (0)
A CENTRAL LIMIT THEOREM LENGTH OF TREES FOR THE PARSIMONY (1995) (0)
Gene duplication and the evaluation of photosynthetic reaction center proteins (1996) (0)
Evolution Without Variation and Selection (2020) (0)
94 12291 – Structure Discovery in Biology : Motifs , Networks & Phylogenies (2012) (0)
Predicting the number of viable autocatalytic sets in systems that combine catalysis and inhibition (2020) (0)
Supplementary Information: Accuracy in near-perfect virus phylogenies (2021) (0)
Gene Transfer-based Phylogenetics: Analytical Expressions and Additivity via Birth–Death Theory (2022) (0)
Phylogenetic Tree Shape (2005) (0)
Kaikoura Information Processing Letters tree theorems : Computing the maximum agreement subtree (1993) (0)
Mathematical aspects of phylogenetic networks (2015) (0)
Mathematics of Evolution and Phylogeny Library of Congress Cataloging in Publication Data (data Available) (2004) (0)
Combinatorial properties of phylogenetic diversity indices (2019) (0)
Counting and optimising maximum phylogenetic diversity sets (2021) (0)
Folding and unfolding phylogenetic trees and networks (2016) (0)
Combinatorics of polymer models of early metabolism (2021) (0)
The expected loss of feature diversity (versus phylogenetic diversity) following rapid extinction at the present (2023) (0)
Combinatorics of Polymer-Based Models of Early Metabolism (2021) (0)
Chapter 3: Tree shape and random discrete phylogenies (2016) (0)
‘Lassoing’ a phylogenetic tree I: basic properties, shellings, and covers (2011) (0)
Inferring phylogenies: an epic worth the wait: Inferring Phylogenies by Joseph Felsenstein. Sinauer Press, 2004. US$59.95 (664 pages) ISBN 0 87893 177-5 (2004) (0)
Is the Random Tree Puzzle process the same as the Yule-Harding process? (2012) (0)
Combinatorial and probabilistic methods in biodiversity theory (2010) (0)
Chapter 6 SUPERTREE METHODS FOR ANCESTRAL DIVERGENCE DATES AND OTHER APPLICATIONS (0)
The probability of joint monophyly of all species in an arbitrary species tree (2021) (0)
Evolutionary Isolation and Phylogenetic Diversity Loss Under Random Extinction Events (2017) (0)
On Patchworks and Hierarchies (2012) (0)
An Arrow-type result for inferring a species tree from gene trees (2013) (0)
Supplementary material from "Autocatalytic chemical networks at the origin of metabolism" (2020) (0)
Modelling aspects of consciousness: a topological perspective. (2021) (0)
The length of a random leaf coloration on a random tree. (1997) (0)
Species notions that combine phylogenetic trees and phenotypic partitions (2018) (0)

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