Naoki Sugimoto
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Computer Science
Naoki Sugimoto's Degrees
- PhD Computer Science University of Tokyo
- Masters Computer Science University of Tokyo
- Bachelors Computer Science University of Tokyo
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(Suggest an Edit or Addition)Naoki Sugimoto's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Improved free-energy parameters for predictions of RNA duplex stability. (1986) (1278)
- Thermodynamic parameters to predict stability of RNA/DNA hybrid duplexes. (1995) (613)
- Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes. (1996) (441)
- RNA structure prediction. (1988) (404)
- Effects of molecular crowding on the structures, interactions, and functions of nucleic acids. (2014) (344)
- Hydration regulates thermodynamics of G-quadruplex formation under molecular crowding conditions. (2006) (259)
- SPR sensor chip for detection of small molecules using molecularly imprinted polymer with embedded gold nanoparticles. (2005) (254)
- Molecular crowding effects on structure and stability of DNA. (2008) (230)
- Nucleic acid duplex stability: influence of base composition on cation effects. (1999) (225)
- The effect of molecular crowding with nucleotide length and cosolute structure on DNA duplex stability. (2004) (190)
- Composite of Au nanoparticles and molecularly imprinted polymer as a sensing material. (2004) (166)
- Characterization of structure and stability of long telomeric DNA G-quadruplexes. (2006) (162)
- Duplex dissociation of telomere DNAs induced by molecular crowding. (2004) (158)
- Molecular crowding regulates the structural switch of the DNA G-quadruplex. (2002) (157)
- Structural transition from antiparallel to parallel G-quadruplex of d(G4T4G4) induced by Ca2+. (2003) (154)
- Molecular crowding of the cosolutes induces an intramolecular i-motif structure of triplet repeat DNA oligomers at neutral pH. (2010) (148)
- Characterization and thermodynamic properties of quadruplex/duplex competition (2002) (135)
- Detection of a Prognostic Indicator in Early‐Stage Cancer Using Functionalized Graphene‐Based Peptide Sensors (2012) (134)
- Ultrasensitive and Selective Detection of a Prognostic Indicator in Early‐Stage Cancer Using Graphene Oxide and Carbon Nanotubes (2010) (130)
- Thermodynamics-structure relationship of single mismatches in RNA/DNA duplexes. (2000) (127)
- DNA logic gates based on structural polymorphism of telomere DNA molecules responding to chemical input signals. (2006) (125)
- Temperature dependence of thermodynamic properties for DNA/DNA and RNA/DNA duplex formation. (2002) (119)
- Monomorphic RNA G-quadruplex and polymorphic DNA G-quadruplex structures responding to cellular environmental factors. (2010) (118)
- Suppression of gene expression by G-quadruplexes in open reading frames depends on G-quadruplex stability. (2013) (118)
- Molecular Evolution of Functional Nucleic Acids with Chemical Modifications (2010) (115)
- Facilitation of RNA enzyme activity in the molecular crowding media of cosolutes. (2009) (115)
- Improved parameters for prediction of RNA structure. (1987) (110)
- Hydration of Watson-Crick base pairs and dehydration of Hoogsteen base pairs inducing structural polymorphism under molecular crowding conditions. (2009) (104)
- Sequence dependence for the energetics of dangling ends and terminal base pairs in ribonucleic acid. (1987) (103)
- Structural competition involving G-quadruplex DNA and its complement. (2003) (103)
- Stability of XGCGCp, GCGCYp, and XGCGCYp helixes: an empirical estimate of the energetics of hydrogen bonds in nucleic acids. (1986) (103)
- pH and cation effects on the properties of parallel pyrimidine motif DNA triplexes. (2001) (101)
- Artificial G-wire switch with 2,2'-bipyridine units responsive to divalent metal ions. (2007) (98)
- Dehydration from conserved stem regions is fundamental for ligand-dependent conformational transition of the adenine-specific riboswitch. (2012) (97)
- Structure, stability and behaviour of nucleic acids in ionic liquids (2014) (94)
- Beads-on-a-string structure of long telomeric DNAs under molecular crowding conditions. (2012) (92)
- Phthalocyanines: a new class of G-quadruplex-ligands with many potential applications. (2012) (89)
- Multiple and cooperative binding of fluorescence light-up probe thioflavin T with human telomere DNA G-quadruplex. (2013) (88)
- Free energy increments for hydrogen bonds in nucleic acid base pairs (1987) (85)
- Thermodynamic study of internal loops in oligoribonucleotides: symmetric loops are more stable than asymmetric loops. (1991) (85)
- Roles of Mg2+ in TPP‐dependent riboswitch (2005) (81)
- A-T base pairs are more stable than G-C base pairs in a hydrated ionic liquid. (2012) (79)
- Topological impact of noncanonical DNA structures on Klenow fragment of DNA polymerase (2017) (78)
- Regulation of DNA nucleases by molecular crowding (2007) (78)
- Cu2+ Inhibits the Aggregation of Amyloid β-Peptide(1-42) in vitro. (2001) (78)
- Energetics of internal GU mismatches in ribooligonucleotide helixes. (1986) (78)
- Efficacy of base-modification on target binding of small molecule DNA aptamers. (2013) (78)
- In vitro selection of aptamers that act with Zn2+. (2000) (76)
- DNA-based biosensor for monitoring pH in vitro and in living cells. (2005) (75)
- Loop residues of thrombin-binding DNA aptamer impact G-quadruplex stability and thrombin binding. (2011) (75)
- Aptamer carbon nanodot sandwich used for fluorescent detection of protein. (2012) (73)
- Effect of divalent cations on antiparallel G‐quartet structure of d(G4T4G4) (2001) (73)
- Specific Binding of Anionic Porphyrin and Phthalocyanine to the G-Quadruplex with a Variety of in Vitro and in Vivo Applications (2012) (69)
- Drastic effect of a single base difference between human and tetrahymena telomere sequences on their structures under molecular crowding conditions. (2005) (69)
- Effect of molecular crowding on DNA polymerase activity (2006) (66)
- Molecular imprinting under molecular crowding conditions: an aid to the synthesis of a high-capacity polymeric sorbent for triazine herbicides. (2007) (64)
- Stability of RNA quadruplex in open reading frame determines proteolysis of human estrogen receptor α (2013) (61)
- Long RNA dangling end has large energetic contribution to duplex stability. (2002) (60)
- Destabilization of DNA G-Quadruplexes by Chemical Environment Changes during Tumor Progression Facilitates Transcription. (2018) (59)
- Stabilization of three-way junctions of DNA under molecular crowding conditions. (2009) (58)
- Reduced graphene oxide upconversion nanoparticle hybrid for electrochemiluminescent sensing of a prognostic indicator in early-stage cancer. (2014) (57)
- Influences of ribonucleotide on a duplex conformation and its thermal stability: study with the chimeric RNA-DNA strands. (2004) (55)
- Effect of pressure on the stability of G-quadruplex DNA: thermodynamics under crowding conditions. (2013) (55)
- Choline ion interactions with DNA atoms explain unique stabilization of A-T base pairs in DNA duplexes: a microscopic view. (2014) (53)
- The structural stability and catalytic activity of DNA and RNA oligonucleotides in the presence of organic solvents (2016) (51)
- Anionic phthalocyanines targeting G-quadruplexes and inhibiting telomerase activity in the presence of excessive DNA duplexes. (2010) (50)
- Effects of substrate structure on the kinetics of circle opening reactions of the self-splicing intervening sequence from Tetrahymena thermophila: evidence for substrate and Mg2+ binding interactions. (1989) (50)
- Free Energy Increments for Hydrogen Bonds in Nucleic Acid Base Pairs. (1987) (47)
- Kinetics for reaction of a circularized intervening sequence with CU, UCU, CUCU, and CUCUCU: mechanistic implications from the dependence on temperature and on oligomer and Mg2+ concentrations. (1988) (47)
- Effects of metal ions and cosolutes on G-quadruplex topology. (2017) (46)
- Dissecting the contribution of thrombin exosite I in the recognition of thrombin binding aptamer (2013) (46)
- Conformation and the sodium ion condensation on DNA and RNA structures in the presence of a neutral cosolute as a mimic of the intracellular media. (2008) (46)
- Molecularly imprinted nanocomposites for highly sensitive SPR detection of a non-aqueous atrazine sample. (2009) (45)
- Through-bond effects in the ternary complexes of thrombin sandwiched by two DNA aptamers (2016) (44)
- Hydration changes upon DNA folding studied by osmotic stress experiments. (2012) (44)
- Nucleobase-Modified PNA Suppresses Translation by Forming a Triple Helix with a Hairpin Structure in mRNA In Vitro and in Cells. (2016) (43)
- Small‐Molecule‐Directed Assembly: A Gold Nanoparticle‐Based Strategy for Screening of Homo‐Adenine DNA Duplex Binders (2008) (43)
- A DNA duplex with extremely enhanced thermal stability based on controlled immobilization on gold nanoparticles. (2006) (43)
- Development of new functional nanostructures consisting of both DNA duplex and quadruplex. (2010) (42)
- Unusual -1 ribosomal frameshift caused by stable RNA G-quadruplex in open reading frame. (2013) (41)
- New Insights into Transcription Fidelity: Thermal Stability of Non-Canonical Structures in Template DNA Regulates Transcriptional Arrest, Pause, and Slippage (2014) (41)
- Nucleic acid with guanidinium modification exhibits efficient cellular uptake. (2005) (41)
- Structural Polymorphism of Telomeric DNA Regulated by pH and Divalent Cation (2003) (40)
- An anionic phthalocyanine decreases NRAS expression by breaking down its RNA G-quadruplex (2018) (39)
- Influence of cationic molecules on the hairpin to duplex equilibria of self-complementary DNA and RNA oligonucleotides (2006) (39)
- Role of Nd3+ and Pb2+ on the RNA cleavage reaction by a small ribozyme. (1997) (39)
- Engineering exosome polymer hybrids by atom transfer radical polymerization (2020) (38)
- Recovery of the Formation and Function of Oxidized G-Quadruplexes by a Pyrene-Modified Guanine Tract. (2018) (38)
- Label-free colorimetric and quantitative detection of cancer marker protein using noncrosslinking aggregation of Au/Ag nanoparticles induced by target-specific peptide probe. (2011) (38)
- Effect of Pressure on Thermal Stability of G-Quadruplex DNA and Double-Stranded DNA Structures (2013) (37)
- Mechanical insights into ribosomal progression overcoming RNA G-quadruplex from periodical translation suppression in cells (2016) (36)
- Sequence dependence for the energetics of terminal mismatches in ribooligonucleotides. (1987) (35)
- Comparable Stability of Hoogsteen and Watson–Crick Base Pairs in Ionic Liquid Choline Dihydrogen Phosphate (2014) (35)
- Tuning riboswitch-mediated gene regulation by rational control of aptamer ligand binding properties. (2015) (34)
- Model studies of the effects of intracellular crowding on nucleic acid interactions. (2016) (34)
- Study on effects of molecular crowding on G-quadruplex-ligand binding and ligand-mediated telomerase inhibition. (2013) (32)
- DNA tetraplex structure formation from human telomeric repeat motif (TTAGGG):(CCCTAA) in nanocavity water pools of reverse micelles. (2012) (31)
- Chemical biology of non-canonical structures of nucleic acids for therapeutic applications. (2020) (31)
- Loop nucleotides impact the stability of intrastrand i-motif structures at neutral pH. (2015) (31)
- Influence of alpha-deoxyadenosine on the stability and structure of DNA. Thermodynamic and molecular mechanics studies. (1995) (30)
- Novel One-Tube-One-Step Real-Time Methodology for Rapid Transcriptomic Biomarker Detection: Signal Amplification by Ternary Initiation Complexes. (2016) (30)
- Molecular crowding and hydration regulating of G-quadruplex formation. (2013) (30)
- Translational halt during elongation caused by G-quadruplex formed by mRNA. (2013) (29)
- Cotranslational protein assembly imposes evolutionary constraints on homomeric proteins (2018) (29)
- Sequence and solvent effects on telomeric DNA bimolecular G-quadruplex folding kinetics. (2013) (29)
- Conformational flexibility influences degree of hydration of nucleic acid hybrids. (2011) (29)
- Site‐specific cleavage reaction catalyzed by leadzyme is enhanced by combined effect of lead and rare earth ions (1996) (29)
- Effect of divalent cations and cytosine protonation on thermodynamic properties of intermolecular DNA double and triple helices. (2002) (28)
- Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations (2018) (28)
- Reevaluation of the stability of G-quadruplex structures under crowding conditions. (2016) (28)
- Mirror-Image Dependence: Targeting Enantiomeric G-Quadruplex DNA Using Triplex Metallohelices. (2018) (28)
- Real-Time Monitoring of G-Quadruplex Formation during Transcription. (2016) (28)
- Stabilization factors affecting duplex formation of peptide nucleic acid with DNA. (2001) (28)
- Thermodynamic properties of water molecules in the presence of cosolute depend on DNA structure: a study using grid inhomogeneous solvation theory (2015) (28)
- Regulation of telomerase activity by the thermodynamic stability of a DNA x RNA hybrid. (2008) (27)
- Site-selective RNA cleavage by DNA bearing a base pair-mimic nucleoside. (2005) (27)
- Design of allele‐specific primers and detection of the human ABO genotyping to avoid the pseudopositive problem (2008) (27)
- DNA base flipping by a base pair-mimic nucleoside (2005) (27)
- Hammerhead ribozyme activity and oligonucleotide duplex stability in mixed solutions of water and organic compounds (2014) (26)
- Effect of metal ions and sequence of deoxyribozymes on their RNA cleavage activity (1999) (25)
- Development of small peptides recognizing a monosaccharide by combinatorial chemistry (2000) (25)
- Reversible stability switching of a hairpin DNA via a photo-responsive linker unit. (2009) (25)
- Dimerization of nucleic acid hairpins in the conditions caused by neutral cosolutes. (2012) (24)
- Pressure-dependent formation of i-motif and G-quadruplex DNA structures. (2015) (24)
- RNA/DNA hybrid duplexes with identical nearest‐neighbor base‐pairs have identical stability (1994) (24)
- Large stabilization of a DNA duplex by the deoxyadenosine derivatives tethering an aromatic hydrocarbon group. (2003) (24)
- Nearest-neighbor parameters for predicting DNA duplex stability in diverse molecular crowding conditions (2020) (24)
- A rapid and sensitive "add-mix-measure" assay for multiple proteinases based on one gold nanoparticle-peptide-fluorophore conjugate. (2010) (24)
- Effects of Polyethylene Glycol on DNA Duplex Stability at Different NaCl Concentrations (2007) (24)
- Kinetic Property of Bulged Helix Formation: Analysis of Kinetic Behavior Using Nearest-Neighbor Parameters (2000) (24)
- Characterization of Intracellular Crowding Environments with Topology-Based DNA Quadruplex Sensors. (2019) (23)
- On the mechanism of preferential incorporation of dAMP at abasic sites in translesional DNA synthesis. Role of proofreading activity of DNA polymerase and thermodynamic characterization of model template-primers containing an abasic site (1995) (23)
- Unexpected Position-Dependent Effects of Ribose G-Quartets in G-Quadruplexes. (2017) (23)
- Application of the Thermodynamic Parameters of DNA Stability Prediction to Double-Helix Formation of Deoxyribooligonucleotides (1994) (23)
- Thermodynamics-hydration relationships within loops that affect G-quadruplexes under molecular crowding conditions. (2013) (23)
- Biological and nanotechnological applications using interactions between ionic liquids and nucleic acids (2018) (22)
- tRNA Shifts the G-quadruplex-Hairpin Conformational Equilibrium in RNA towards the Hairpin Conformer. (2016) (22)
- Effects of Cosolvents on the Folding and Catalytic Activities of the Hammerhead Ribozyme (2015) (22)
- Reaction field for efficient porphyrin metallation catalysis produced by self-assembly of a short DNA oligonucleotide (1998) (22)
- Noncanonical structures and their thermodynamics of DNA and RNA under molecular crowding: beyond the Watson-Crick double helix. (2014) (22)
- i-Motifs are more stable than G-quadruplexes in a hydrated ionic liquid. (2015) (22)
- Molecularly-imprinted polymeric logic gates selective for predetermined chemical input species. (2006) (22)
- Validation of the nearest-neighbor model for Watson–Crick self-complementary DNA duplexes in molecular crowding condition (2019) (21)
- Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides (2020) (21)
- Conformational Dynamics of the RNA G-Quadruplex and its Effect on Translation Efficiency (2019) (21)
- Structural effect of synthetic zwitterionic cosolutes on the stability of DNA duplexes (2008) (21)
- Factors that contribute to efficient catalytic activity of a small Ca2+-dependent deoxyribozyme in relation to its RNA cleavage function. (2003) (21)
- Effects of trimethylamine N-oxide and urea on DNA duplex and G-quadruplex (2016) (21)
- Synthesis of water-soluble porphyrin and the corresponding highly planar benzoporphyrin without meso-substituents (2005) (20)
- Effect of molecular crowding on the stability of RNA G-quadruplexes with various numbers of quartets and lengths of loops. (2020) (20)
- Roles of non-canonical structures of nucleic acids in cancer and neurodegenerative diseases (2021) (20)
- Immobilized small deoxyribozyme to distinguish RNA secondary structures. (2002) (20)
- Newly characterized interaction stabilizes DNA structure: oligoethylene glycols stabilize G-quadruplexes CH–π interactions (2017) (20)
- Interaction of water with the G-quadruplex loop contributes to the binding energy of G-quadruplex to protein. (2012) (19)
- Detection of porphyrin using a short peptide immobilized on a surface plasmon resonance sensor chip. (2001) (19)
- Transition characteristics and thermodynamic analysis of DNA duplex formation: a quantitative consideration for the extent of duplex association. (2000) (19)
- Consecutive GC base pairs determine the energy barrier of DNA duplex formation under molecularly crowded conditions. (2007) (18)
- Stability prediction of canonical and non-canonical structures of nucleic acids in various molecular environments and cells. (2020) (18)
- Quantitative Analyses of Nucleic Acid Stability Under the Molecular Crowding Condition Induced by Cosolutes (2013) (17)
- The Effects of Molecular Crowding on the Structure and Stability of G-Quadruplexes with an Abasic Site (2011) (17)
- Molecular imprinting in alcohols: utility of a pre-polymer based strategy for synthesizing stereoselective artificial receptor polymers in hydrophilic media (2002) (17)
- Identification of unknown substances in food contact polystyrene (1998) (17)
- Structural and Affinity Analyses of G-Quadruplex DNA Aptamers for Camptothecin Derivatives (2013) (17)
- A mechanistic framework for the second step of splicing catalyzed by the Tetrahymena ribozyme. (1996) (16)
- Structural foundation for DNA behavior in hydrated ionic liquid: An NMR study. (2015) (16)
- Quartz crystal microbalance sensor targeting low molecular weight compounds using oligopeptide binder and peptide-immobilized latex beads (2002) (16)
- Positional effect of single bulge nucleotide on PNA(peptide nucleic acid)/DNA hybrid stability. (1999) (16)
- Volumetric analysis of formation of the complex of G-quadruplex DNA with hemin using high pressure. (2017) (16)
- Capture of cationic ligands bound diffusely to base pairs during DNA refolding. (2008) (15)
- Hydration is Required in DNA G‐Quadruplex–Protein Binding (2011) (15)
- Structural transition of d(G4T4G4) from antiparallel to parallel G-quartet induced by divalent cations. (2001) (15)
- Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition (2020) (15)
- Thermodynamic stability of Hoogsteen and Watson-Crick base pairs in the presence of histone H3-mimicking peptide. (2011) (15)
- Measurements of the binding of a large protein using a substrate density-controlled DNA chip. (2011) (15)
- The Stability of DNA and RNA G-Quartets † (1996) (15)
- Triplex-forming peptide nucleic acid modified with 2-aminopyridine as a new tool for detection of A-to-I editing. (2016) (15)
- Neuronal differentiation of neural progenitor cells by intracellular delivery of synthetic oligopeptide derived from Von Hippel-Lindau protein. (2009) (15)
- A Turn-On Detection of DNA Sequences by Means of Fluorescence of DNA-Templated Silver Nanoclusters via Unique Interactions of a Hydrated Ionic Liquid (2018) (14)
- Affinity of molecular ions for DNA structures is determined by solvent-accessible surface area. (2014) (14)
- Binding of a Fluorescent Oligonucleotide to a Circularized Intervening Sequence from Tetrahymena thermophila (1989) (14)
- Hydration Regulates The Thermodynamic Stability Of Dna Structures Under Molecular Crowding Conditions (2007) (14)
- Crowding Shifts the FMN Recognition Mechanism of Riboswitch Aptamer from Conformational Selection to Induced Fit. (2018) (14)
- Rational Design and Tuning of Functional RNA Switch to Control an Allosteric Intermolecular Interaction. (2015) (14)
- Control of stability and structure of nucleic acids using cosolutes. (2014) (14)
- Structural switch of telomere DNA by pH and monovalent cation. (2005) (14)
- Local thermodynamics of the water molecules around single- and double-stranded DNA studied by grid inhomogeneous solvation theory (2016) (14)
- Thermodynamic stability of base pairs between 2-hydroxyadenine and incoming nucleotides as a determinant of nucleotide incorporation specificity during replication. (2001) (14)
- Effect of locked nucleic acid modifications on the thermal stability of noncanonical DNA structure. (2011) (13)
- Effect of substrate RNA sequence on the cleavage reaction by a short ribozyme. (1998) (13)
- Real-time monitoring of DNA hybridization kinetics on living cell surfaces. (2013) (13)
- Volumetric contributions of loop regions of G-quadruplex DNA to the formation of the tertiary structure. (2017) (13)
- Effects of metal ions and catalytic loop sequences on the complex formation of a deoxyribozyme and its RNA substrate. (2000) (13)
- In vitro selection of aptamers that recognize a monosaccharide (1998) (13)
- Thermal Stability of RNA Structures with Bulky Cations in Mixed Aqueous Solutions. (2016) (13)
- Synthesis, structure and thermal stability of fully hydrophobic porphyrin–DNA conjugates (2007) (13)
- Watson-Crick versus Hoogsteen Base Pairs: Chemical Strategy to Encode and Express Genetic Information in Life. (2021) (13)
- Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications (2020) (13)
- Mechanical force analysis of peptide interactions using atomic force microscopy. (2004) (13)
- Use of Nucleic Acid Analogs for the Study of Nucleic Acid Interactions (2011) (12)
- In vitro assays predictive of telomerase inhibitory effect of G-quadruplex ligands in cell nuclei. (2014) (12)
- Dynamics and energetics of the base flipping conformation studied with base pair-mimic nucleosides. (2009) (12)
- Synchronized translation for detection of temporal stalling of ribosome during single-turnover translation. (2012) (12)
- Sub-acute Toxicity Study of 5-Hydroxy - 2(Hydroxy-Methyl) 4H-pyran-4 One, Isolated from Aspergillus fumigatus (2001) (12)
- An approach to peptide-based ATP receptors by a combination of random selection, rational design, and molecular imprinting. (2009) (12)
- Complexation of peptide with Cu2+ responsible to inducing and enhancing the formation of α-helix conformation (2000) (11)
- Thermodynamic analysis of duplex formation of the heterochiral DNA with L-deoxyadenosine. (2005) (11)
- RNA G-quadruplexes facilitate RNA accumulation in G-rich repeat expansions. (2020) (11)
- Structure and stability of DNA quadruplexes under molecular crowding conditions. (2005) (11)
- Phthalocyanines: A New Class of G‐Quadruplex‐Ligands with Many Potential Applications (2012) (11)
- Drastic Stabilization of Parallel DNA Hybridizations by a Polylysine Comb‐Type Copolymer with Hydrophilic Graft Chain (2014) (11)
- Cationic Porphyrin Induced a Telomeric DNA to G-Quadruplex Form in Water (2008) (10)
- Substituent effects on proton tunnelling. Reaction between 2,4,6-trinitrotoluene and 1-substituted piperidines in acetonitrile (1985) (10)
- A mRNA-Responsive G-Quadruplex-Based Drug Release System (2015) (10)
- Isolation of a Yellowish Antibiotic Pigment 4-hydroxy Nitrobenzene from a Strain of Streptomyces (2002) (10)
- Gene Regulation System with an Artificial RNA Switch Operating in Human Cells (2011) (10)
- Conformational switch of a functional nanowire based on the DNA G-quadruplex. (2007) (10)
- Double-Helix Melting of Octamers of Deoxyriboadenylic and Deoxyribothymidylic Acids in the Presence of Ethidium (1991) (10)
- Sole and stable RNA duplexes of G-rich sequences located in the 5'-untranslated region of protooncogenes. (2010) (10)
- Solvent, pressure, and deuterium isotope effects on proton tunnelling. The reaction between 2,4,6-trinitrotoluene and 1,8-diazabicyclo[5.4.0]undec-7-ene in aprotic solvents (1984) (10)
- Catalytic Activities of Ribozymes and DNAzymes in Water and Mixed Aqueous Media (2017) (10)
- Methyl substitution regulates the enantioselectivity of supramolecular complex binding to human telomeric G-quadruplex DNA. (2014) (9)
- Chemical Modulation of DNA Replication along G-Quadruplex Based on Topology-Dependent Ligand Binding. (2021) (9)
- A role of the Trp–His interaction in the conformational switch between α-helix and β-sheet in short alanine-based peptides (2000) (9)
- Riboswitches for Enhancing Target Gene Expression in Eukaryotes (2008) (9)
- Bisubstrate Function of RNA Polymerases Triggered by Molecular Crowding Conditions. (2019) (9)
- Conformational Dynamics of mRNA in Gene Expression as New Pharmaceutical Target. (2017) (9)
- A reversible B-A transition of DNA duplexes induced by synthetic cationic copolymers. (2016) (9)
- Drastic stability change of X-X mismatch in d(CXG) trinucleotide repeat disorders under molecular crowding condition. (2018) (9)
- A fluorescent probe for detection of an intracellular prognostic indicator in early-stage cancer. (2015) (9)
- G‐Quadruplexes with Tetra(ethylene glycol)‐Modified Deoxythymidines are Resistant to Nucleases and Inhibit HIV‐1 Reverse Transcriptase (2016) (9)
- New Insights into the Functions of Nucleic Acids Controlled by Cellular Microenvironments (2021) (9)
- Selection of RNAs for Constructing “Lighting-UP” Biomolecular Switches in Response to Specific Small Molecules (2013) (8)
- Pressure effect on tunneling of the proton- and deuteron-transfer reaction of 2,4,6-trinitrotoluene with 1,8-diazabicyclo[5.4.0]undec-7-ene in acetonitrile (1983) (8)
- Control of guanine-rich DNA secondary structures depending on the protease activity using a designed PNA peptide. (2015) (8)
- A Highly Sensitive Telomerase Activity Assay that Eliminates False-Negative Results Caused by PCR Inhibitors (2013) (8)
- A selection of short peptides that interact with a porphyrin as a small target by immobilized phage display (1999) (8)
- Sandwiching Interaction of Peptides with a Porphyrin (1997) (8)
- Roles of the Amino Group of Purine Bases in the Thermodynamic Stability of DNA Base Pairing (2014) (8)
- Stacking interaction in the middle and at the end of a DNA helix studied with non-natural nucleotides. (2010) (8)
- Hydration Is an Important Factor to Regulate Thermodynamic Stability of a DNA Duplex under Molecular Crowding Conditions (2008) (8)
- Molecular crowding induces primer extension by RNA polymerase through base stacking beyond Watson–Crick rules (2020) (7)
- Thermodynamics of Triple-Helix and Double-Helix Formations by Octamers of Deoxyriboadenylic and Deoxyribothymidylic Acids (1992) (7)
- The roles of cosolutes on the hammerhead ribozyme activity. (2006) (7)
- Synthetic cinchonidine receptors obtained by cross-linking linear poly(methacrylic acid) derivatives as an alternative molecular imprinting technique. (2004) (7)
- Ruthenium Polypyridyl Complex Bound to a Unimolecular Chair-Form G-Quadruplex (2022) (7)
- Kinetics and tunneling in the proton- and deuteron-transfer reaction between 2,4,6-trinitrotoluene and 1,8-diazabicyclo[5.4.0]undec-7-ene in some aprotic solvents (1982) (7)
- Alkylating probes for the G-quadruplex structure and evaluation of the properties of the alkylated G-quadruplex DNA. (2018) (7)
- Thermal stability and hydration state of DNA G-quadruplex regulated by loop regions. (2009) (7)
- Single-Stranded DNA Recognition of a 24-mer Peptide Derived from RecA Protein (1998) (7)
- Mirror-Image Dependence: Targeting Enantiomeric G-Quadruplex DNA Using Triplex Metallohelices (2018) (7)
- Molecular crowding effect on metal ion binding properties of the hammerhead ribozyme. (2008) (7)
- α-β Structural Transition of Short Oligopeptides by Water/Organic Solvent Titration (1999) (7)
- Co-Transcriptional Molecular Assembly Results in a Kinetically Controlled Irreversible RNA Conformational Switch. (2018) (7)
- An oligopeptide containing the C-terminal sequence of RNase a has a potent RNase a binding property. (2003) (7)
- Specific Light-Up System for Protein and Metabolite Targets Triggered by Initiation Complex Formation (2017) (7)
- Effect of cytosine protonation and cation on thermodynamic properties of parallel DNA triplex family. (2001) (7)
- Identification of Principal Pigments in Haematococcus Algae Color (1998) (6)
- G-quartet, G-quadruplex, and G-wire regulated by chemical stimuli. (2011) (6)
- Central Dogma for a Molecular Design Based on DNA: DNB (Databasing/Designable Nanobio) → ENB (Engineering Nanobio) → FNB (Functional Nanobio) (2005) (6)
- A novel screening method for combinatorial chemistry for low affinity interactions (1999) (6)
- Modulation of Ribozyme and Deoxyribozyme Activities Using Tetraalkylammonium Ions. (2017) (6)
- C-Rich Sequence in a Non-Template DNA Strand Regulates Structure Change of G-Quadruplex in a Template Strand during Transcription (2019) (6)
- Effects of background anionic compounds on the activity of the hammerhead ribozyme in Mg2+-unsaturated solutions (2015) (6)
- In situ condensation of an anti-cancer drug into fibrin gel enabling effective inhibition of tumor cell growth. (2019) (6)
- DNA sensor's selectivity enhancement and protection from contaminating nucleases due to a hydrated ionic liquid. (2015) (6)
- RNA-Capturing Microsphere Particles (R-CAMPs) for Optimization of Functional Aptamers. (2019) (6)
- A Novel Stable RNA Pentaloop that Interacts Specifically with A Motif Peptide of Lambda-N Protein (2006) (6)
- Stabilization of a DNA duplex under molecular crowding conditions of PEG. (2004) (6)
- Stabilization of DNA Loop Structures by Large Cations. (2019) (6)
- Chemical Biology of Double Helical and Non-Double Helical Nucleic Acids: “To B or Not To B, That Is the Question” (2021) (6)
- Organelle-mimicking liposome dissociates G-quadruplexes and facilitates transcription (2014) (6)
- Key Tertiary Interactions in FMN Riboswitch Aptamers Required for Ligand Binding (2015) (6)
- Recognition of a Flipped Base in a Hairpinloop DNA by a Small Peptide (2008) (6)
- Rücktitelbild: A–T Base Pairs are More Stable Than G–C Base Pairs in a Hydrated Ionic Liquid (Angew. Chem. 6/2012) (2012) (5)
- The yields of transcripts for a RNA polymerase regulated by hairpin structures in nascent RNAs. (2012) (5)
- Triple-Helix and Double-Helix Formations of Octamers of Deoxyriboadenylic and Deoxyribothymidylic Acids (1991) (5)
- Effect of Potassium Concentration on Triplex Stability under Molecular Crowding Conditions (2020) (5)
- Utilization of Salmon Milt DNA Against UV Damage (2010) (5)
- Effect of Cu2+ on Complex Formation Between a Deoxyribozyme and Its Substrates† (1998) (5)
- Designable DNA Functions Toward New Nanobiotechnology (2009) (5)
- DNA recognition of a 24-mer peptide derived from RecA protein. (2000) (5)
- Expansion of the DNA Alphabet beyond Natural DNA Recognition (2016) (5)
- Analysis for peptide binding to porphyrin using surface plasmon resonance (2001) (5)
- Comparison of thermodynamic stabilities between PNA (peptide nucleic acid)/DNA hybrid duplexes and DNA/DNA duplexes. (1999) (5)
- Relationship between catalytic activity and secondary structure of a hammerhead ribozyme: A study using thermodynamic parameters for RNA structure prediction (1993) (5)
- Pressure Effect on Rate Constants of Proton-transfer Reactions from 2,4,6-Trinitrotoluene to N,N,N′,N′-Tetramethylguanidine and 1,8-Diazabicyclo[5.4.0]undec-7-ene in Acetonitrile and Dichloromethane (1981) (5)
- Kinetic study of proton tunneling in the reaction between 2,4,6-trinitrotoluene and 1,8-diazabicyclo[5.4.0]-undec-7-ene in benzonitrile (1984) (5)
- Thermal stability and conformation of DNA and proteins under the confined condition in the matrix of hydrogels (2018) (4)
- Stabilization energy of the catalytic core of the Tetrahymena ribozyme (1991) (4)
- Signalling aptamer optimization through selection using RNA-capturing microsphere particles. (2020) (4)
- Triple-Helical Binding of Peptide Nucleic Acid Inhibits Maturation of Endogenous MicroRNA-197. (2021) (4)
- Lighting Up of Thiazole Orange on G-Quadruplex DNA by High Pressure (2019) (4)
- INTERACTIONS OF 5-(1-PYRENYL)-10,15,20-TRIS(4-METHYL-PYRIDINIUM)PORPHINE WITH DOUBLE-HELIX AND TRIPLE-HELIX NUCLEIC ACIDS (1996) (4)
- DNA nanowire sensitive to the surrounding condition. (2005) (4)
- Thermodynamics and kinetics of propidium binding to poly(A)•poly(U) in aqueous solution (1990) (4)
- Conformational changes of the phenyl and naphthyl isocyanate-DNA adducts during DNA replication and by minor groove binding molecules (2013) (4)
- Structures of Minor Pigments in Cochineal Dye (1998) (4)
- Factors regulating thermodynamic stability of DNA structures under molecular crowding conditions. (2006) (4)
- Triplex-forming PNA modified with unnatural nucleobases: the role of protonation entropy in RNA binding. (2016) (4)
- Stabilities of internal rU-dG and rG-dT pairs in RNA/DNA hybrids. (1997) (4)
- Aptamer‐Based Universal Fluorometric Sensors Based on Allosteric Modulation of RNA–Peptide Interactions (2014) (3)
- Quantitative Analysis of Nucleic Acid Stability with Ligands Under High Pressure to Design Novel Drugs Targeting G‐Quadruplexes (2017) (3)
- Combined Effects of Methylated Cytosine and Molecular Crowding on the Thermodynamic Stability of DNA Duplexes (2021) (3)
- Quantitative Analysis of Stall of Replicating DNA Polymerase by G-Quadruplex Formation. (2019) (3)
- A Stable DNA Tetraloop and Its Structural Tolerance for Modification (2001) (3)
- Properties of long human telomeric DNAs under cell-mimicking conditions. (2006) (3)
- Base-pairing selectivity of a ureido-linked phenyl-2'-deoxycytidine derivative. (2012) (3)
- Hydroxyl groups in cosolutes regulate the G-quadruplex topology of telomeric DNA. (2020) (3)
- New Modified Deoxythymine with Dibranched Tetraethylene Glycol Stabilizes G-Quadruplex Structures (2020) (3)
- Preparation of hydrogels for the study of the effects of spatial confinement on DNA (2014) (3)
- Application of Improved Free-Energy Parameters of RNA Stability to Codon–Anticodon Interactions (1989) (3)
- The effect of the structure of cosolutes on the DNA duplex formation. (2006) (3)
- Dangling Ends Perturb the Stability of RNA Duplexes Responsive to Surrounding Conditions (2014) (3)
- Effect of secondary structure of short double-stranded RNA on RNAi efficiency. (2002) (3)
- A new concept for the design of antisense oligonucleotides based on nucleic acid thermostability. (2001) (3)
- Correction: Triplex-forming peptide nucleic acid modified with 2-aminopyridine as a new tool for detection of A-to-I editing. (2016) (3)
- Experimental quantitation of cation effect on nucleic acid stability. (1997) (3)
- Incorporation of O(6)-methylguanine restricts the conformational conversion of the human telomere G-quadruplex under molecular crowding conditions. (2016) (3)
- Volumetric Strategy for Quantitatively Elucidating a Local Hydration Network around a G-Quadruplex. (2022) (3)
- Action of 5-trifluoromethyl-2'-deoxyuridine on DNA synthesis. (1992) (3)
- Controlling liquid-liquid phase separation of G-quadruplex-forming RNAs in a sequence-specific manner. (2022) (2)
- Effect of Dangling Ends on the Double-Helix Melting of Ribooligonucleotides at Different Na+ Concentrations. (1991) (2)
- DNA Morphologic Changes Induced by Spermine on a Gold Surface under DNA Crowding Conditions (2011) (2)
- DNA junction structure stabilized by molecular crowding conditions. (2009) (2)
- Cotranslational assembly imposes evolutionary constraints on homomeric proteins (2016) (2)
- A 24 mer peptide derived from RecA protein can discriminate a single-stranded DNA from a double-stranded DNA (1997) (2)
- Enhanced amplification of polymerase chain reaction by addition of cosolutes derived from a cellular compatible solute. (2008) (2)
- Dielectricity of a molecularly crowded solution accelerates NTP misincorporation during RNA-dependent RNA polymerization by T7 RNA polymerase (2022) (2)
- HIGH-PRESSURE STOPPED-FLOW KINETICS OF PROTON-TRANSFER REACTION BETWEEN 4-NITROPHENYLNITROMETHANE AND 1,1′,3,3′-TETRAMETHYLGUANIDINE IN APROTIC SOLVENTS (1980) (2)
- PRESSURE EFFECT ON TUNNELING OF THE PROTON- AND DEUTERON-TRANSFER REACTION OF 2,4,6-TRINITROTOLUENE WITH 1,8-DIAZABICYCLO(5.4.0)UNDEC-7-ENE IN ACETONITRILE (1984) (2)
- Transcriptome screening followed by integrated physicochemical and structural analyses for investigating RNA-mediated berberine activity (2021) (2)
- Design and Properties of Ligand-Conjugated Guanine Oligonucleotides for Recovery of Mutated G-Quadruplexes (2018) (2)
- Pressure Effect on the Folding of G-Quadruplex DNA Modified with Hexaethylene Glycol (2016) (2)
- Effect of Putrescine and PEG on a Structural Transition of DNA G-Quadruplex (2003) (2)
- Development of molecular logic gates using the structural switch of telomere DNAs. (2006) (2)
- Effects of Modifying Thioflavin T at the N3-Position on Its G4 Binding and Fluorescence Emission (2020) (2)
- Effect of Copper Ion on Conformations of Short Alanine-Based Peptides with Single TRP/HIS Stacking Interactions (1999) (2)
- Inhibition of deoxyribooligonucleotides on the circle opening reaction of the intervening sequence from Tetrahymena thermophila. (1990) (2)
- Studies on Optical Isomerism of Astaxanthin in Natural Food Colors and Principal Pigment in Phaffia Color (2000) (2)
- Development of a short Ca2+-dependent deoxyribozyme with RNA cleavage activity. (1999) (2)
- Molecular Imprinting within a Single Peptide Molecule for Synthesizing a Water-Soluble ATP Receptor (2007) (1)
- Introduction of Peptide Functions into DNA by Nucleic Acid Peptides, NAPs (2004) (1)
- Evolution of a phosphorothioate RNA library during in vitro selection. (1997) (1)
- Stability of 3' dangling ends on the core helix of AUGCAU at various Na+ concentrations. (1990) (1)
- Effect of Molecular Crowding on DNA Polymerase Reactions along Unnatural DNA Templates (2020) (1)
- Secondary structure change of oligonucleotide induced by salts. (2004) (1)
- Effect of dangling ends on the stability of a DNA double helix. (1991) (1)
- Development of a novel functional biosensor with a short Ca(2+)-dependent deoxyribozyme. (2000) (1)
- DNA Logic Gates Based on Structural Polymorphism of Telomere DNA Molecules Responding to Chemical Input Signals (2007) (1)
- Ultrasensitive and Selective Detection of a Prognostic Indicator in Early‐Stage Cancer Using Graphene Oxide and Carbon Nanotubes (1)
- Development of Functional Nucleic Acids and Peptides by Combinatorial Chemistry and Downsizing Methods (2000) (1)
- Effect of Unpaired Terminal Nucleotides of Substrate RNAs on the RNA Ligation with T4 RNA Ligase (1991) (1)
- Investigations of the cation binding to nucleotides by monitoring the hairpin-duplex equilibrium of a self-complementary sequence. (2009) (1)
- Thermodynamics of DNA structures under molecular crowding conditions with neutral and positive charged cosolutes. (2008) (1)
- Use of a Ureido-Substituted Deoxycytidine Module for DNA Assemblies (2016) (1)
- Effects of Ionic Liquid and Liposomes on the Structure, Stability, and Function of Nucleic Acids (2014) (1)
- Influences of Molecular Crowding on the Properties and Functions of Biomolecules (2006) (1)
- European Chemistry Congress (2004) (1)
- Improved Parameters for Prediction of RNA Secondary Structure and Insights into why RNA forms Double Helixes (1986) (1)
- Correction to ‘Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition’ (2021) (1)
- Large stacking stability of a base pair-mimic nucleotide on the DNA duplex. (2003) (1)
- Cover Picture: Nucleobase‐Modified PNA Suppresses Translation by Forming a Triple Helix with a Hairpin Structure in mRNA In Vitro and in Cells (Angew. Chem. Int. Ed. 3/2016) (2016) (1)
- A NANO-CIRCULAR SINGLE-STRANDED DNA AS A NOVEL TOOL FOR SNPs DETECTION (2005) (1)
- Bulky cations greatly increase the turnover of a native hammerhead ribozyme (2019) (1)
- Effects of cosolutes on the thermodynamic stability of parallel DNA duplex and triplex. (2007) (1)
- What Regulates Biological Reactions? Genetic Information or Environmental Conditions? (2006) (1)
- Effect of Molecular Environment and High Pressure on the Thermodynamic Stability of Nucleic Acid Structures (2015) (1)
- DNA G-quadruplex detection system employing a protein fibril ligand (2015) (1)
- New thermodynamic characterization and transition mechanism of DNA duplex formation. (2000) (1)
- Ab initio MO calculations of model molecules for ribozyme reaction including an Mg2+ ion (1991) (1)
- Effect of nucleotide sequence and metal ions at the active site on a short ribozyme activation. (1997) (1)
- Toxicological Studies of Two Novel Compounds Isolated from Streptomyces Species (2001) (1)
- DNA structures under molecular crowding conditions with a phosphorylcholine derivative (MPC) (2015) (1)
- Melting Behavior and Stability of (dA)8·(dT)8 Double Helix (1992) (1)
- Functional role of the cofactor on activation process of L-histidine dependent ribozyme. (2006) (1)
- Choline Ions Stabilize A-T Base Pairs by Fitting into Minor Groove (2015) (0)
- Thermal stability and conformation of DNA and proteins under the confined condition in the matrix of hydrogels (2018) (0)
- Effect of chemical environment changes in cell on DNA structures and functions (2020) (0)
- Nearest-neighbor parameters for the prediction of RNA duplex stability in diverse in vitro and cellular-like crowding conditions. (2023) (0)
- SURVEY AND SUMMARY Roles of non-canonical structures of nucleic acids in cancer and neurodegenerative diseases (2021) (0)
- Kinetic hydrogen isotope effects in the reaction between 2,4,6-trinitrotoluene and 1-ethylpiperidine in acetonitrile. The effect of pressure (1985) (0)
- Regulation of Transcription and Translation by Quadruplex Structure of Nucleic Acids and Its Stabilizers (2015) (0)
- Interaction of oligonucleotides with a single stranded DNA binding site of RecA protein. (1995) (0)
- Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications (2020) (0)
- Triplet Analysis That Identifies Unpaired Regions of Functional RNAs (2011) (0)
- Inside Back Cover: tRNA Shifts the G‐quadruplex–Hairpin Conformational Equilibrium in RNA towards the Hairpin Conformer (Angew. Chem. Int. Ed. 46/2016) (2016) (0)
- Thermodynamics and kinetics for the helix formation of the P3 region in Tetrahymena ribozyme. (1990) (0)
- Effect of DNA modifications on the transition between canonical and non-canonical DNA structures in CpG islands during senescence (2021) (0)
- 3P119 Analysis for the effect of choline ions on the stability of DNA base pairs using molecular dynamics simulation(05A. Nucleic acid: Structure & Property,Poster) (2013) (0)
- Monitoring of the Composition of Electroless Palladium-Phosphorus Alloy Plating Baths by FTIR ATR Spectrometry (1994) (0)
- Novel biomaterials derived from deoxyribozyme and NAPzyme (2003) (0)
- M2 G-quadruplex 20 wt% ethylene glycol (2018) (0)
- Specific Light-Up System for Protein and Metabolite Targets Triggered by Initiation Complex Formation (2017) (0)
- Mg2+ effects on a circle opening reaction of the self-splicing intervening sequence from Tetrahymena thermophila. (1989) (0)
- Development of New Biotechnology for the 21st Century(2)Structural and thermodynamic studies of PNA/DNA hybrids containing single bulge nucleotides (1999) (0)
- Enhancement of the Catalytic Activity of Hammerhead Ribozymes by Organic Cations (2021) (0)
- Simple and fast screening for structure-selective G-quadruplex ligands. (2023) (0)
- Intramolecular G-quadruplex-hairpin loop structure competition of a GC-rich exon region in the TMPRSS2 gene. (2021) (0)
- Recognition of the base pair-mimic nucleosides by DNA polymerases. (2006) (0)
- KINETICS AND TUNNELING IN THE PROTON- AND DEUTERON-TRANSFER REACTION BETWEEN 2,4,6-TRINITROTOLUENE AND 1,8-DIAZABICYCLO(5.4.0)UNDEC-7-ENE IN SOME APROTIC SOLVENTS (1982) (0)
- A Cembrane-type Diterpene from Flue-cured Burley Tobacco (Nicotiana tabacum L.) leaves (2001) (0)
- New combination of metal ions can improve a ribozyme system (1997) (0)
- Endogenous G-quadruplex-forming RNAs inhibit the activity of SARS-CoV-2 RNA polymerase. (2023) (0)
- Synthetic Chlorophyll -A Derivatives Stabilize DNA G-Quadruplex Structures (2018) (0)
- Effects of Protein Binding on DNA G-Quadruplex Structures (2011) (0)
- The Winner ' s Article of the First Dr . Masao Horiba ' s Award Development of an Intracellular pH Measurement Method using DNA as a Sensing Material (2005) (0)
- Innenrücktitelbild: tRNA Shifts the G‐quadruplex–Hairpin Conformational Equilibrium in RNA towards the Hairpin Conformer (Angew. Chem. 46/2016) (2016) (0)
- Beyond the Watson-Crick double helix: design of functional nucleic acids in silico, in tube, and in cell. (2003) (0)
- Development of a tailor-made functional peptide by template-directed intramolecular cross-linking (2006) (0)
- Role of 2'-OH on thermodynamic stability and structure of chimeric oligonucleotides. (2002) (0)
- Effect of the third-strand length on the formation of DNA triple helix. (1991) (0)
- Artificial turn-on riboswitch to control target gene expression using a wild-type riboswitch splicing mechanism. (2020) (0)
- The effects of high concentration of molecular crowding, including the protein on DNA (2016) (0)
- Coformational switch of oligonucleotide induced by spermine. (2005) (0)
- Innenrücktitelbild: Effect of Pressure on the Stability of G‐Quadruplex DNA: Thermodynamics under Crowding Conditions (Angew. Chem. 51/2013) (2013) (0)
- Specific recognition of the basic N peptide by an RNA. (2005) (0)
- Dielectricity of a molecularly crowded solution accelerates NTP misincorporation during RNA-dependent RNA polymerization by T7 RNA polymerase (2022) (0)
- Characterization and In vitro Antimicrobial Activity of the Two Novel Compounds of Streptomyces Species (2001) (0)
- Combinatorial approach to development of peptides that recognize DNA tetraloops. (1999) (0)
- M2 G-quadruplex 10 wt% PEG8000 (2018) (0)
- Regulation of leadzyme (lead-dependent ribozyme) reaction by amino acids and rare earth ions. (1995) (0)
- Mechanisms for interactions between cholesterol efflux protein ABCA1 and cytoplasmic proteins modulating its transport activity(α-TTP) and stability(α1-syntrophin) (2017) (0)
- The base-pairing ability of the base pair-mimic nucleosides. (2007) (0)
- Development and Application of a Highly Efficient Protein Synthesis Technique Using Riboswitches in Microorganisms (2018) (0)
- Double-helix formation of self-complementary chimeric oligonucleotides r(CG)nd(CG)3-n (n = 0, 1, 2, 3). (1992) (0)
- A 24 mer peptide with activities of discrimination and recombination of nucleic acids (1999) (0)
- Kinetics and thermodynamics of double-helix formation of self-complementary deoxyribooctanucleotides d(TCTATAGA) and d(TAGATCTA). (1992) (0)
- The structural stability and catalytic activity of DNA and RNA oligonucleotides in the presence of organic solvents (2016) (0)
- Effects of background anionic compounds on the activity of the hammerhead ribozyme in Mg2+-unsaturated solutions (2015) (0)
- [Structure and reaction mechanism of ribozyme]. (1990) (0)
- INFLUENCES OF THE SOLUTION COMPONENT ON THE THERMODYNAMICS OF DNA AND RNA STRUCTURES (2006) (0)
- SOLVENT, PRESSURE, AND DEUTERIUM ISOTOPE EFFECTS ON PROTON TUNNELING. THE REACTION BETWEEN 2,4,6-TRINITROTOLUENE AND 1,8-DIAZABICYCLO(5.4.0)UNDEC-7-ENE IN APROTIC SOLVENTS (1984) (0)
- Development of New Biotechnology for the 21st Century(1)Role of side-chain interactions of peptides in some neurodegenerative diseases (1999) (0)
- Roles of 2′-Hydroxyls of Leadzyme on an RNA Cleavage (1997) (0)
- Inside Back Cover: Effect of Pressure on the Stability of G‐Quadruplex DNA: Thermodynamics under Crowding Conditions (Angew. Chem. Int. Ed. 51/2013) (2013) (0)
- Development of ribozyme synthesis system using a rolling-synchronization: effect of template DNA secondary structure on recognition of RNA polymerase. (2001) (0)
- Evaluation of small biomolecular ligands for FABPs expressed in brain (2017) (0)
- Functional DNA Materials Controlled by Surrounding Conditions (2007) (0)
- DNA methylation is regulated by both the stability and topology of G-quadruplex. (2022) (0)
- M2 G-quadruplex dilute solution (2018) (0)
- Selection of Peptides That Recognize Tryptophan by Combinatorial Chemistry (1998) (0)
- Nucleic Acid Aptamers as Molecular Tags for Omics Analyses Involving Sequencing (2012) (0)
- Construction of Artificial Peptides to Control DNA G-quadruplex Structures Depending on Protease Activity for Regulation of Protein Expression (2013) (0)
- Stability of the TAR RNA and its complex with arginine. (1993) (0)
- Activation Parameters for the Proton-Transfer Reaction of 1,8-Bis(dimethylamino)naphthalene in Micellar Solution. (1990) (0)
- Functionalization of DNA by the base pair-mimic nucleosides. (2007) (0)
- Cladogenetic Orthogonal Light-Up Aptamers for Simultaneous Detection of Multiple Small Molecules in Cells. (2022) (0)
- Pressure-temperature control of activity of RNA polymerase ribozyme. (2022) (0)
- Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions (2012) (0)
- 3.6.4 List of symbols and abbreviations (1990) (0)
- Titelbild: Nucleobase-Modified PNA Suppresses Translation by Forming a Triple Helix with a Hairpin Structure in mRNA In Vitro and in Cells (Angew. Chem. 3/2016) (2016) (0)
- Relationship between Structure and Function of Nucleic Acids: The Study Using Nearest Neighbor Parameters. (1993) (0)
- Influence of Pressure on Primary Kinetic Isotope Effects of the Proton-Transfer Reaction between 4-Nitrophenyl-nitromethane and 1, 1', 3, 3'-Tetramethylguanidine in Toluene and Dichloromethane (Commemoration Issue Dedicated to Professor Yoshimasa Takezaki on the Occasion of his Retirement) (1981) (0)
- Enhancement of nonspecific interactions between DNA and basic proteins under cell-mimicking conditions (2017) (0)
- Analysis of the secondary structure of a ribozyme that requires His as a cofactor. (2004) (0)
- ALPHA -BETA STRUCTURAL TRANSITION OF SHORT OLIGOPEPTIDES BY WATER/ORGANICSOLVENT TITRATION (1999) (0)
- An anionic phthalocyanine decreases NRAS expression by breaking down its RNA G-quadruplex (2018) (0)
- Electrostatic interaction in the reaction between porphyrin and DNA. (1989) (0)
- Contents list. (2016) (0)
- Specific Effect of Rare Earth Ions on the Binding between a Ribozyme and a Substrate-The Analysis by Using a Surface Plasmon Resonance (1996) (0)
- Structure and stability of DNA containing alpha-deoxyadenosine. (1995) (0)
- Aptamer Optimization: RNA‐Capturing Microsphere Particles (R‐CAMPs) for Optimization of Functional Aptamers (Small 26/2019) (2019) (0)
- Conformational change of a nucleotide by a base-pair mimic nucleoside in the complementary DNA strand. (2004) (0)
- Peptide-DNA Hybrid G-Quadruplex Structures for Regulation of Protein Expression Depending on Protease Activity (2013) (0)
- Cover Picture: G‐Quadruplexes with Tetra(ethylene glycol)‐Modified Deoxythymidines are Resistant to Nucleases and Inhibit HIV‐1 Reverse Transcriptase (ChemBioChem 15/2016) (2016) (0)
- Measurement of interaction between porphyrin and oligopeptide by AFM (2000) (0)
- Cotranslational protein assembly imposes evolutionary constraints on homomeric proteins (2018) (0)
- [Stability prediction of active structures of nucleic acids]. (1995) (0)
- Applicability of the nearest-neighbour model for pseudoknot RNAs. (2022) (0)
- Biological and nanotechnological applications using interactions between ionic liquids and nucleic acids (2018) (0)
- Functions of nucleic acids with non-canonical structures (2016) (0)
- Replication Control of Human Telomere G-Quadruplex DNA by G-Quadruplex Ligands Dependent on Solution Environment (2022) (0)
- Inside Back Cover: Dangling Ends Perturb the Stability of RNA Duplexes Responsive to Surrounding Conditions (ChemMedChem 9/2014) (2014) (0)
- Back Cover: A–T Base Pairs are More Stable Than G–C Base Pairs in a Hydrated Ionic Liquid (Angew. Chem. Int. Ed. 6/2012) (2012) (0)
- A novel approach of cell-free peptide synthesis and SNPs detection using nano-circular single-stranded DNA. (2003) (0)
- Development of PNA-Peptides Controlling DNA G-Quadruplex Structures Depending on Protease Activity (2012) (0)
- Back Cover: Drastic Stabilization of Parallel DNA Hybridizations by a Polylysine Comb-Type Copolymer with Hydrophilic Graft Chain (ChemMedChem 9/2014) (2014) (0)
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What Schools Are Affiliated With Naoki Sugimoto?
Naoki Sugimoto is affiliated with the following schools:
