Nikos Kyrpides

Q: What Schools Are Affiliated With Nikos Kyrpides

Nikos Kyrpides is affiliated with the following schools: University of California, Berkeley, University of Illinois Urbana-Champaign, King Abdulaziz University, University of Crete, Aristotle University of Thessaloniki

Nikos Kyrpides's AcademicInfluence.com Rankings

Nikos Kyrpides

Biology

#4447

World Rank

#6627

Historical Rank

Computational Biology

#92

World Rank

#92

Historical Rank

Microbiology

#229

World Rank

#268

Historical Rank

biology Degrees

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Biology

Nikos Kyrpides's Degrees

PhD Microbiology University of California, Berkeley
Masters Microbiology University of California, Berkeley
Bachelors Biology University of California, Berkeley

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Why Is Nikos Kyrpides Influential?

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According to Wikipedia, Nikos Kyrpides is a Greek-American bioscientist who has worked on the origins of life, information processing, bioinformatics, microbiology, metagenomics and microbiome data science. He is a senior staff scientist at the Berkeley National Laboratory, head of the Prokaryote Super Program and leads the Microbiome Data Science program at the US Department of Energy Joint Genome Institute.

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Nikos Kyrpides's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Structure, Function and Diversity of the Healthy Human Microbiome (2012) (8630)
A framework for human microbiome research (2012) (2113)
Insights into the phylogeny and coding potential of microbial dark matter (2013) (1784)
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus (1997) (1355)
The minimum information about a genome sequence (MIGS) specification (2008) (1344)
IMG: the integrated microbial genomes database and comparative analysis system (2011) (1272)
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite (2007) (1267)
Protein interaction maps for complete genomes based on gene fusion events (1999) (1122)
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata (2007) (1106)
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea (2009) (1052)
IMG ER: a system for microbial genome annotation expert review and curation (2009) (998)
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2017) (990)
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis (2003) (840)
Experimental Determination and System Level Analysis of Essential Genes in Escherichia coli MG1655 (2003) (732)
Uncovering Earth’s virome (2016) (703)
A Catalog of Reference Genomes from the Human Microbiome (2010) (683)
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities (2006) (682)
CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats (2007) (665)
The genomic basis of trophic strategy in marine bacteria (2009) (611)
IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes (2018) (607)
Minimum Information about a Biosynthetic Gene cluster. (2015) (600)
Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation. (2008) (596)
The Wolbachia Genome of Brugia malayi: Endosymbiont Evolution within a Human Pathogenic Nematode (2005) (588)
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications (2011) (588)
IMG 4 version of the integrated microbial genomes comparative analysis system (2013) (569)
Programmed DNA destruction by miniature CRISPR-Cas14 enzymes (2018) (554)
GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes (2010) (549)
The genome sequence of the facultative intracellular pathogen Brucella melitensis (2001) (538)
Microbial species delineation using whole genome sequences (2015) (537)
Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software (2017) (514)
The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata (2011) (472)
Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample (2012) (443)
Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000. (2005) (436)
Protein structure determination using metagenome sequence data (2017) (427)
Genome Project Standards in a New Era of Sequencing (2009) (422)
The integrated microbial genomes (IMG) system (2005) (415)
WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction (2000) (405)
Genome-Based Taxonomic Classification of the Phylum Actinobacteria (2018) (394)
A unified catalog of 204,938 reference genomes from the human gut microbiome (2020) (386)
IMG/M: integrated genome and metagenome comparative data analysis system (2016) (382)
IMG/M: a data management and analysis system for metagenomes (2007) (372)
New insights from uncultivated genomes of the global human gut microbiome (2019) (371)
The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata (2007) (352)
Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy (2014) (348)
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods (2007) (347)
The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification (2014) (337)
CheckV assesses the quality and completeness of metagenome-assembled viral genomes (2020) (333)
Genome Sequence and Analysis of the Oral Bacterium Fusobacterium nucleatum Strain ATCC 25586 (2002) (316)
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection (2018) (304)
Genomes OnLine Database (GOLD): a monitor of genome projects world-wide (2001) (302)
A genomic catalog of Earth’s microbiomes (2020) (295)
Minimum Information about an Uncultivated Virus Genome (MIUViG) (2018) (286)
A korarchaeal genome reveals insights into the evolution of the Archaea (2008) (282)
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) (2015) (280)
The integrated microbial genomes system: an expanding comparative analysis resource (2009) (277)
The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools (2012) (271)
IMG/M 4 version of the integrated metagenome comparative analysis system (2013) (266)
The Evolution of Host Specialization in the Vertebrate Gut Symbiont Lactobacillus reuteri (2011) (264)
IMG/M: the integrated metagenome data management and comparative analysis system (2011) (259)
The SPFH domain: implicated in regulating targeted protein turnover in stomatins and other membrane-associated proteins. (1999) (255)
The ERGOTM genome analysis and discovery system (2003) (255)
Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project (2010) (253)
Symbiosis insights through metagenomic analysis of a microbial consortium (2006) (246)
The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea (2010) (245)
The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide (2005) (244)
Symbiosis insights through metagenomic analysis of a microbial consortium. (2006) (242)
The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes (2009) (241)
The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities (2020) (238)
Universally conserved translation initiation factors. (1998) (235)
The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions (2007) (230)
Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria (2020) (199)
The Genomic Standards Consortium (2011) (196)
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life (2017) (196)
Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains (2014) (195)
Genome Sequence and Analysis of the Soil Cellulolytic Actinomycete Thermobifida fusca YX (2007) (192)
Prepublication data sharing (2009) (190)
Giant viruses with an expanded complement of translation system components (2017) (184)
The Earth Microbiome Project: Meeting report of the “1st EMP meeting on sample selection and acquisition” at Argonne National Laboratory October 6th 2010. (2010) (178)
The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation (2012) (166)
Metagenomics uncovers gaps in amplicon-based detection of microbial diversity (2016) (164)
IMG/VR v3: an integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses (2020) (160)
Genomes OnLine database (GOLD) v.7: updates and new features (2018) (160)
Genome-Based Taxonomic Classification of Bacteroidetes (2016) (156)
IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses (2016) (153)
Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements (2016) (150)
Giant virus diversity and host interactions through global metagenomics (2020) (147)
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes (2019) (146)
Comparative Metagenomic and Metatranscriptomic Analysis of Hindgut Paunch Microbiota in Wood- and Dung-Feeding Higher Termites (2013) (145)
Complete genome sequence of Kytococcus sedentarius type strain (541T) (2009) (141)
Erratum: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus (1998) (138)
KOW: a novel motif linking a bacterial transcription factor with ribosomal proteins. (1996) (138)
IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes (2018) (131)
Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes (2018) (129)
Individual genome assembly from complex community short-read metagenomic datasets (2011) (125)
Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome (2021) (125)
A thermostable Cas9 with increased lifetime in human plasma (2017) (124)
Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs (2016) (124)
Identification of a haloalkaliphilic and thermostable cellulase with improved ionic liquid tolerance (2011) (119)
Large-scale contamination of microbial isolate genomes by Illumina PhiX control (2015) (118)
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium (2011) (118)
Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes (2019) (118)
A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans (2008) (115)
Whole-genome comparative analysis of three phytopathogenic Xylella fastidiosa strains (2002) (114)
Complete genome sequence of Kytococcus sedentarius type strain (541 T ) (2009) (113)
Genome‐based evolutionary history of Pseudomonas spp (2018) (111)
Genomic Characterization of Methanomicrobiales Reveals Three Classes of Methanogens (2009) (111)
Genomes OnLine Database (GOLD) v.8: overview and updates (2020) (108)
Succession in the petroleum reservoir microbiome through an oil field production lifecycle (2017) (108)
Universal Protein Families and the Functional Content of the Last Universal Common Ancestor (1999) (106)
The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4) (2016) (105)
Archaeal translation initiation revisited: the initiation factor 2 and eukaryotic initiation factor 2B alpha-beta-delta subunit families. (1998) (105)
Stop codon reassignments in the wild (2014) (104)
Murine colitis reveals a disease-associated bacteriophage community (2018) (104)
Complete genome sequence of the Medicago microsymbiont Ensifer (Sinorhizobium) medicae strain WSM419 (2010) (103)
A global metagenomic map of urban microbiomes and antimicrobial resistance (2021) (102)
Nontargeted virus sequence discovery pipeline and virus clustering for metagenomic data (2017) (100)
The Complete Multipartite Genome Sequence of Cupriavidus necator JMP134, a Versatile Pollutant Degrader (2010) (98)
Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T) (2011) (97)
Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii (2009) (97)
An experimental metagenome data management and analysis system (2006) (97)
The Genome of the Obligately Intracellular Bacterium Ehrlichia canis Reveals Themes of Complex Membrane Structure and Immune Evasion Strategies (2006) (96)
Engineering Escherichia coli for Biodiesel Production Utilizing a Bacterial Fatty Acid Methyltransferase (2011) (95)
High level of intergenera gene exchange shapes the evolution of haloarchaea in an isolated Antarctic lake (2013) (95)
IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites (2015) (93)
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment (2019) (93)
Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project (2013) (93)
Complete Genome Sequences of Six Strains of the Genus Methylobacterium (2012) (90)
The emergence of major cellular processes in evolution (1996) (87)
Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream (2009) (86)
Complete Genome of the Cellulolytic Ruminal Bacterium Ruminococcus albus 7 (2011) (84)
Comparative genome analysis of Bacillus cereus group genomes with Bacillus subtilis. (2005) (84)
Genomics of Aerobic Cellulose Utilization Systems in Actinobacteria (2012) (83)
Genomes OnLine Database (GOLD 1.0): a monitor of complete and ongoing genome projects world-wide (1999) (82)
Transcription in archaea. (1999) (82)
Draft sequencing and comparative genomics of Xylella fastidiosa strains reveal novel biological insights. (2002) (81)
Sequencing of Multiple Clostridial Genomes Related to Biomass Conversion and Biofuel Production (2010) (81)
Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato (2017) (81)
HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks (2018) (81)
Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential (2018) (80)
Genome Sequence of the Fleming Strain of Micrococcus luteus, a Simple Free-Living Actinobacterium (2009) (77)
Genome analysis of F. nucleatum sub spp vincentii and its comparison with the genome of F. nucleatum ATCC 25586. (2003) (74)
Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains (2015) (72)
Complete genome sequence of “Enterobacter lignolyticus” SCF1 (2011) (71)
Complete genome sequence of Odoribacter splanchnicus type strain (1651/6T) (2011) (71)
Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China (2015) (70)
Towards a balanced view of the bacterial tree of life (2017) (69)
Novel Insights into the Diversity of Catabolic Metabolism from Ten Haloarchaeal Genomes (2011) (68)
Improving Microbial Genome Annotations in an Integrated Database Context (2013) (67)
ProDeGe: a computational protocol for fully automated decontamination of genomes (2015) (67)
Standards in Genomic Sciences (2009) (66)
Whole‐genome sequence annotation: ‘Going wrong with confidence’ (1999) (66)
Metabolic dependencies govern microbial syntrophies during methanogenesis in an anaerobic digestion ecosystem (2020) (65)
A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey (2015) (64)
Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov. (2015) (64)
IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes (2016) (62)
Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers. (2010) (61)
Complete genome sequence of Haliangium ochraceum type strain (SMP-2T) (2010) (61)
Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034T) (2010) (60)
Complete Genome Sequence of the Aerobic Marine Methanotroph Methylomonas methanica MC09 (2011) (60)
Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System (2009) (59)
Complete genome sequence of “Thioalkalivibrio sulfidophilus” HL-EbGr7 (2011) (59)
IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase (2019) (59)
Comparative Genomic Analysis of the Endosymbionts of Herbivorous Insects Reveals Eco-Environmental Adaptations: Biotechnology Applications (2013) (58)
Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus (2011) (58)
Critical Assessment of Metagenome Interpretation – a benchmark of computational metagenomics software (2017) (58)
Focus: Synergistetes. (2009) (57)
COVID-19 pandemic reveals the peril of ignoring metadata standards (2020) (56)
Complete genome sequence of Rhizobium leguminosarum bv trifolii strain WSM2304, an effective microsymbiont of the South American clover Trifolium polymorphum. (2010) (56)
Complete Genome Sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T (2012) (55)
Archaeal and bacterial hyperthermophiles: horizontal gene exchange or common ancestry? (1999) (55)
Prokaryotic community profiles at different operational stages of a Greek solar saltern. (2008) (54)
Microbial co-habitation and lateral gene transfer: what transposases can tell us (2009) (53)
The Complete Genome Sequence of Thermoproteus tenax: A Physiologically Versatile Member of the Crenarchaeota (2011) (53)
Microbiome Data Science: Understanding Our Microbial Planet. (2016) (52)
Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta (2012) (52)
Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9T) and comparison to “Dehalococcoides” strains (2012) (52)
Draft Genome Sequence of Frankia sp. Strain CN3, an Atypical, Noninfective (Nod–) Ineffective (Fix–) Isolate from Coriaria nepalensis (2013) (52)
On the evolution of arginases and related enzymes (1994) (52)
How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity? (2018) (51)
Habitat-Lite: a GSC case study based on free text terms for environmental metadata. (2008) (51)
Complete genome sequence of Thauera aminoaromatica strain MZ1T (2012) (49)
Annotation of metagenome short reads using proxygenes (2008) (48)
Novel protein families in archaean genomes. (1995) (47)
Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics (2013) (47)
Genome-informed Bradyrhizobium taxonomy: where to from here? (2019) (47)
Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system (2016) (47)
Draft Genome Sequence of Frankia sp. Strain BCU110501, a Nitrogen-Fixing Actinobacterium Isolated from Nodules of Discaria trinevis (2013) (47)
Complete genome sequence of the lignin-degrading bacterium Klebsiella sp. strain BRL6-2 (2014) (46)
Complete genome sequence of Geodermatophilus obscurus type strain (G-20T) (2010) (46)
ClaMS: A Classifier for Metagenomic Sequences (2011) (46)
Genome sequence and description of the anaerobic lignin-degrading bacterium Tolumonas lignolytica sp. nov. (2015) (46)
A synthesis of bacterial and archaeal phenotypic trait data (2020) (46)
Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95T) (2011) (45)
Empirical Comparison of Visualization Tools for Larger-Scale Network Analysis (2017) (45)
Comparative metagenomics of hydrocarbon and methane seeps of the Gulf of Mexico (2017) (44)
Draft Genome Sequence of Frankia sp. Strain BMG5.12, a Nitrogen-Fixing Actinobacterium Isolated from Tunisian Soils (2013) (44)
Draft Genome Sequence of Frankia sp. Strain QA3, a Nitrogen-Fixing Actinobacterium Isolated from the Root Nodule of Alnus nitida (2013) (44)
Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2018) (43)
Complete Genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species (2014) (43)
The eubacterial transcriptional activator Lrp is present in the archaeon Pyrococcus furiosus. (1995) (43)
On the Origin of Reverse Transcriptase-Using CRISPR-Cas Systems and Their Hyperdiverse, Enigmatic Spacer Repertoires (2017) (43)
The Genome Sequence of Methanohalophilus mahii SLPT Reveals Differences in the Energy Metabolism among Members of the Methanosarcinaceae Inhabiting Freshwater and Saline Environments (2010) (42)
Complete genome sequence of Desulfobulbus propionicus type strain (1pr3T) (2011) (42)
Complete genome sequence of Isosphaera pallida type strain (IS1BT) (2011) (42)
IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project (2012) (42)
Genome analysis of Desulfotomaculum kuznetsovii strain 17T reveals a physiological similarity with Pelotomaculum thermopropionicum strain SIT. (2013) (41)
Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations (2013) (41)
Toward a standards-compliant genomic and metagenomic publication record. (2008) (41)
Comparative Transcriptomics between Synechococcus PCC 7942 and Synechocystis PCC 6803 Provide Insights into Mechanisms of Stress Acclimation (2014) (41)
Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and t (2014) (40)
Toward unrestricted use of public genomic data (2019) (40)
Facile Recoding of Selenocysteine in Nature. (2016) (40)
Complete genome sequence of Arcobacter nitrofigilis type strain (CIT) (2010) (40)
Complete genome sequence of Anabaena variabilis ATCC 29413 (2014) (40)
Diversity, evolution, and classification of virophages uncovered through global metagenomics (2018) (40)
Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP). (2017) (40)
Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae (2017) (39)
Complete genome sequence of Dehalobacter restrictus PER-K23T (2013) (39)
Complete Genome Sequence of the Ethanol-Producing Zymomonas mobilis subsp. mobilis Centrotype ATCC 29191 (2012) (39)
A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T (2012) (38)
Complete genome sequence of Thioalkalivibrio sp. K90mix (2011) (38)
Complete genome sequence of Spirosoma linguale type strain (1T) (2010) (38)
The Rhodobacter capsulatus genome (2004) (38)
Antarctic archaea–virus interactions: metaproteome-led analysis of invasion, evasion and adaptation (2015) (38)
Complete genome sequence of Truepera radiovictrix type strain (RQ-24T) (2011) (37)
Trichodesmium genome maintains abundant, widespread noncoding DNA in situ, despite oligotrophic lifestyle (2015) (37)
Complete genome sequence of Desulfomicrobium baculatum type strain (XT) (2009) (37)
Complete genome sequence of Sulfurimonas autotrophica type strain (OK10T) (2010) (37)
Complete genome sequence of Meiothermus ruber type strain (21T) (2010) (37)
CheckV: assessing the quality of metagenome-assembled viral genomes (2020) (37)
Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575T) (2009) (36)
Complete genome sequence of Actinosynnema mirum type strain (101T) (2009) (36)
Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome (2014) (35)
Complete genome sequence of Methanoculleus marisnigri Romesser et al. 1981 type strain JR1 (2009) (35)
Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom (2019) (35)
Complete genome sequence of Odoribacter splanchnicus type strain (1651/6 T ) (2011) (35)
A call for standardized classification of metagenome projects. (2010) (35)
Complete Genome Sequence of the Thermophilic Bacterium Exiguobacterium sp. AT1b (2011) (35)
Complete genome sequence of Rhodospirillum rubrum type strain (S1T) (2011) (35)
Methanococcus jannaschii genome: revisited. (1996) (34)
Genome Sequence of the Ethanol-Producing Zymomonas mobilis subsp. mobilis Lectotype Strain ATCC 10988 (2011) (34)
Estimating DNA coverage and abundance in metagenomes using a gamma approximation (2009) (34)
Complete genome sequence of Methanocorpusculum labreanum type strain Z (2009) (34)
Complete genome sequence of Meiothermus ruber type strain (21 T ) (2010) (34)
Genomic Standards Consortium Projects (2014) (34)
A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. (2020) (34)
Complete genome sequence of Haloterrigena turkmenica type strain (4kT) (2010) (34)
Permanent draft genome of Thiobacillus thioparus DSM 505T, an obligately chemolithoautotrophic member of the Betaproteobacteria (2017) (33)
Complete genome sequence of Veillonella parvula type strain (Te3T) (2010) (33)
Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICPT) (2009) (33)
Complete genome sequence of Cellulomonas flavigena type strain (134T) (2010) (33)
Genome sequence of the Leisingera aquimarina type strain (DSM 24565T), a member of the marine Roseobacter clade rich in extrachromosomal elements (2013) (32)
Microbial ecology of an Antarctic hypersaline lake: genomic assessment of ecophysiology among dominant haloarchaea (2014) (32)
Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255T) (2009) (32)
Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling (2013) (31)
Genome sequence of Phaeobacter inhibens type strain (T5T), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens (2013) (31)
Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2018) (31)
Analysis of the Thermotoga maritima genome combining a variety of sequence similarity and genome context tools. (2000) (31)
Complete genome sequence of Nakamurella multipartita type strain (Y-104T) (2010) (31)
Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3T) (2009) (30)
Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845T) (2011) (30)
Complete genome sequence of Olsenella uli type strain (VPI D76D-27CT) (2010) (30)
A unified sequence catalogue of over 280,000 genomes obtained from the human gut microbiome (2019) (30)
Complete genome sequence of Halomicrobium mukohataei type strain (arg-2T) (2009) (30)
Complete genome sequence of Aminobacterium colombiense type strain (ALA-1T) (2010) (30)
Complete genome sequence of Desulfarculus baarsii type strain (2st14T) (2010) (30)
Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSLT) (2011) (30)
Genome Sequence of Thermofilum pendens Reveals an Exceptional Loss of Biosynthetic Pathways without Genome Reduction (2008) (29)
Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park (2012) (29)
Complete genome sequence of Arthrobacter phenanthrenivorans type strain (Sphe3) (2011) (29)
Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1T) (2012) (29)
Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria (2015) (29)
Metagenomic investigation of the geologically unique Hellenic Volcanic Arc reveals a distinctive ecosystem with unexpected physiology. (2016) (29)
Complete genome sequence of Planctomyces limnophilus type strain (Mü 290T) (2010) (29)
The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota (2009) (29)
Complete genome sequence of Thermomonospora curvata type strain (B9T) (2011) (29)
Complete genome sequence of Ferroglobus placidus AEDII12DO (2011) (29)
Complete genome sequence of Streptosporangium roseum type strain (NI 9100T) (2010) (28)
Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9 (2012) (28)
Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1T) (2012) (28)
Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis (2018) (28)
Comparative genome analysis in the integrated microbial genomes (IMG) system. (2007) (28)
Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509T) (2010) (28)
Complete genome sequence of Paludibacter propionicigenes type strain (WB4T) (2011) (28)
Complete genome sequence of Pirellula staleyi type strain (ATCC 27377T) (2009) (28)
Complete genome sequence of Geodermatophilus obscurus type strain (G-20) (2010) (28)
VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families (2021) (28)
Draft Genome Sequence of Methyloferula stellata AR4, an Obligate Methanotroph Possessing Only a Soluble Methane Monooxygenase (2015) (27)
Complete genome sequence of Rhodothermus marinus type strain (R-10T) (2009) (27)
Complete genome sequence of Methanospirillum hungatei type strain JF1 (2016) (27)
Genomic Analysis of Caldithrix abyssi, the Thermophilic Anaerobic Bacterium of the Novel Bacterial Phylum Calditrichaeota (2017) (27)
Global Genetic Cartography of Urban Metagenomes and Anti-Microbial Resistance (2019) (27)
Genome Sequence of the Ethanol-Producing Zymomonas mobilis subsp. pomaceae Lectotype Strain ATCC 29192 (2011) (26)
Complete genome sequence of Atopobium parvulum type strain (IPP 1246T) (2009) (26)
Complete genome sequence of Sulfurospirillum deleyianum type strain (5175T) (2010) (26)
Contrasting Pathways for Anaerobic Methane Oxidation in Gulf of Mexico Cold Seep Sediments (2019) (26)
Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4 (2015) (26)
Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DLT) (2012) (26)
Expansion of the global RNA virome reveals diverse clades of bacteriophages (2022) (25)
Genome sequence of Phaeobacter caeruleus type strain (DSM 24564T), a surface-associated member of the marine Roseobacter clade (2013) (25)
Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IAT) (2010) (25)
Absence of genome reduction in diverse, facultative endohyphal bacteria (2016) (25)
Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T) (2012) (25)
Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain chemolithoautotrophy in heterogeneous environments (2018) (25)
Complete Genome Sequence of the Thermophilic, Piezophilic, Heterotrophic Bacterium Marinitoga piezophila KA3 (2012) (25)
Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4T) (2012) (25)
Genome Sequence of Streptomyces viridosporus Strain T7A ATCC 39115, a Lignin-Degrading Actinomycete (2013) (24)
Complete genome sequence of Gordonia bronchialis type strain (3410T) (2010) (24)
Transfer RNAs with novel cloverleaf structures (2016) (24)
Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments (2016) (24)
Complete genome sequence of Haliangium ochraceum type strain (SMP-2) (2010) (24)
Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria (2011) (24)
Complete genome sequence of Halorhabdus utahensis type strain (AX-2T) (2009) (24)
Draft Genome Sequence of Frankia sp. Strain DC12, an Atypical, Noninfective, Ineffective Isolate from Datisca cannabina (2015) (24)
Complete genome sequence of Halogeometricum borinquense type strain (PR3T) (2009) (24)
Microbial ecology of an Antarctic hypersaline lake: genomic assessment of ecophysiology among dominant haloarchaea (2014) (24)
NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks (2017) (24)
Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336T), a representative of the Roseobacter clade (2013) (23)
Complete genome sequence of Serratia plymuthica strain AS12 (2012) (23)
Sulfate-Reducing Bacteria That Produce Exopolymers Thrive in the Calcifying Zone of a Hypersaline Cyanobacterial Mat (2019) (23)
Draft genome sequences of Bradyrhizobium shewense sp. nov. ERR11T and Bradyrhizobium yuanmingense CCBAU 10071T (2017) (23)
Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883T) (2009) (23)
Complete genome sequence of Saccharomonospora viridis type strain (P101T) (2009) (23)
Complete genome sequence of Cellulophaga lytica type strain (LIM-21T) (2011) (23)
Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil (2016) (23)
Complete genome sequence of the halophilic and highly halotolerant Chromohalobacter salexigens type strain (1H11T) (2011) (23)
Complete genome sequence of Acidaminococcus fermentans type strain (VR4T) (2010) (23)
Complete genome sequence of Anaerococcus prevotii type strain (PC1T) (2009) (23)
Complete genome sequence of Catenulispora acidiphila type strain (ID 139908T) (2009) (22)
Description of Trichococcus ilyis sp. nov. by combined physiological and in silico genome hybridization analyses. (2016) (22)
Complete genome sequence of Dyadobacter fermentans type strain (NS114T) (2009) (22)
Complete genome sequence of Mycobacterium sp. strain (Spyr1) and reclassification to Mycobacterium gilvum Spyr1 (2011) (22)
Complete genome sequence of Leptotrichia buccalis type strain (C-1013-bT) (2009) (22)
Errors in Genome Reviews (1998) (22)
Complete genome sequence of Slackia heliotrinireducens type strain (RHS 1T) (2009) (22)
Atypical Divergence of SARS-CoV-2 Orf8 from Orf7a within the Coronavirus Lineage Suggests Potential Stealthy Viral Strategies in Immune Evasion (2021) (22)
Complete genome sequence of the gliding freshwater bacterium Fluviicola taffensis type strain (RW262T) (2011) (22)
Complete genome sequence of Isosphaera pallida type strain (IS1B T ) (2011) (22)
Untapped viral diversity in global soil metagenomes (2019) (22)
Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34 (2016) (22)
Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10T) (2009) (22)
Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022T) (2010) (22)
Meeting report: the fifth Genomic Standards Consortium (GSC) workshop. (2008) (21)
Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes (2016) (21)
Complete genome sequence of Treponema succinifaciens type strain (6091) (2012) (21)
The Earth Microbiome Project: The Meeting Report for the 1st International Earth Microbiome Project Conference, Shenzhen, China, June 13th-15th 2011 (2011) (21)
Complete genome sequence of Haliscomenobacter hydrossis type strain (OT) (2011) (21)
Complete genome sequence of the acetate-degrading sulfate reducer Desulfobacca acetoxidans type strain (ASRB2T) (2011) (21)
Correction: Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample (2012) (21)
Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain R7A (2014) (21)
Insights into the dynamics between viruses and their hosts in a hot spring microbial mat (2020) (21)
Complete genome sequence of Cellulophaga algicola type strain (IC166T) (2011) (21)
A Functional Mini-Integrase in a Two-Protein-type V-C CRISPR System. (2019) (21)
Complete genome sequence of Treponema succinifaciens type strain (6091T) (2011) (20)
Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels (2015) (20)
Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals (2021) (20)
Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288T) (2010) (20)
Complete genome sequence of Desulfohalobium retbaense type strain (HR100T) (2010) (19)
Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 (2012) (19)
Complete genome sequence of Thermobispora bispora type strain (R51T) (2010) (19)
Complete genome sequence of Mesorhizobium ciceri bv. biserrulae type strain (WSM1271T) (2013) (19)
Genome sequence of Phaeobacter daeponensis type strain (DSM 23529T), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis (2013) (19)
Influence of the polar light cycle on seasonal dynamics of an Antarctic lake microbial community (2020) (19)
Complete genome sequence of Archaeoglobus profundus type strain (AV18T) (2010) (19)
Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens (2013) (19)
Genome analysis of Desulfotomaculum gibsoniae strain GrollT a highly versatile Gram-positive sulfate-reducing bacterium (2014) (19)
Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans (2014) (19)
Ten years of maintaining and expanding a microbial genome and metagenome analysis system. (2015) (19)
Complete genome sequence of Streptobacillus moniliformis type strain (9901T) (2009) (19)
Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin (2013) (19)
The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole (2021) (19)
RNA-Dependent Cysteine Biosynthesis in Bacteria and Archaea (2017) (19)
Genome sequence of the Lotus corniculatus microsymbiont Mesorhizobium loti strain R88B (2014) (18)
Complete genome sequence of Conexibacter woesei type strain (ID131577T) (2010) (18)
Genome of Methanocaldococcus (Methanococcus) jannaschii. (2001) (18)
Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24T) (2010) (18)
Draft Genome Sequences of 10 Strains of the Genus Exiguobacterium (2014) (18)
Finished Genome of Zymomonas mobilis subsp. mobilis Strain CP4, an Applied Ethanol Producer (2014) (18)
Structural and functional features of the intracellular amino terminus of DEG/ENaC ion channels (2001) (18)
Genome sequence of Ensifer sp. TW10; a Tephrosia wallichii (Biyani) microsymbiont native to the Indian Thar Desert (2013) (18)
Draft genome sequence of type strain HBR26T and description of Rhizobium aethiopicum sp. nov. (2017) (17)
Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21T) (2009) (17)
A changing of the guard. (2009) (17)
Complete genome sequence of Cellulophaga lytica type strain (LIM-21) (2011) (17)
Complete genome sequence of Leadbetterella byssophila type strain (4M15T) (2011) (17)
Correction: Comparative Genomic Analysis of the Microbiome of Herbivorous Insects Reveals Eco-Environmental Adaptations: Biotechnology Applications (2013) (17)
Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems (2016) (17)
Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T) (2012) (17)
Complete genome sequence of Olsenella uli type strain (VPI D76D-27C) (2010) (17)
Metagenomic analysis of phosphorus removing sludge communities (2008) (16)
Complete genome sequence of Cryptobacterium curtum type strain (12-3T) (2009) (16)
Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1T) (2010) (16)
Complete genome sequence of Chitinophaga pinensis type strain ( UQM 2034 T ) (2010) (16)
Laying the foundation for a Genomic Rosetta Stone: creating information hubs through the use of consensus identifiers. (2008) (16)
Complete genome sequence of Marivirga tractuosa type strain (H-43T) (2011) (16)
Complete genome sequence of Deinococcus maricopensis type strain (LB-34T) (2011) (16)
Complete genome sequence of Meiothermus silvanus type strain (VI-R2T) (2010) (16)
A Comparison of Microbial Genome Web Portals (2018) (16)
Complete genome sequence of Sebaldella termitidis type strain (NCTC 11300T) (2010) (16)
Complete genome sequence of Thermocrinis albus type strain (HI 11/12T) (2010) (16)
Complete genome sequence of Desulfobulbus propionicus type strain (1pr3 T ) (2011) (16)
Mechanisms of specificity in mRNA degradation: autoregulation and cognate interactions. (1993) (16)
Complete genome sequence of Methanothermus fervidus type strain (V24ST) (2010) (16)
Complete genome sequence of Cellulophaga algicola type strain (IC166) (2011) (15)
Tetratrico-peptide-repeat proteins in the archaeon Methanococcus jannaschii. (1998) (15)
Parallel origins of the nucleosome core and eukaryotic transcription from Archaea (1996) (15)
Heterologous Expression and Characterization of Two 1-Hydroxy-2-Naphthoic Acid Dioxygenases from Arthrobacter phenanthrenivorans (2011) (15)
Complete genome sequence of “ Enterobacter lignolyticus ” SCF 1 (2018) (15)
Complete genome sequence of Thermosphaera aggregans type strain (M11TLT) (2010) (15)
A five-fold expansion of the global RNA virome reveals multiple new clades of RNA bacteriophages (2022) (15)
Complete genome sequence of Actinosynnema mirum type strain (101) (2014) (15)
Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022) (2014) (15)
The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools (2012) (15)
Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production (2013) (15)
Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566T (2013) (15)
Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207T) (2010) (15)
Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation (2020) (15)
Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil (2020) (15)
Complete genome sequence of Methanoplanus petrolearius type strain (SEBR 4847T) (2010) (14)
Complete genome sequence of Nakamurella multipartita type strain (Y-104) (2010) (14)
Genome sequence of Rhizobium leguminosarum bv trifolii strain WSM1689, the microsymbiont of the one flowered clover Trifolium uniflorum (2013) (14)
Complete genome sequence of the moderately thermophilic mineral-sulfide-oxidizing firmicute Sulfobacillus acidophilus type strain (NALT) (2012) (14)
Erratum: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life (2018) (14)
Complete genome sequence of Desulfarculus baarsii type strain (2st14) (2011) (14)
Meeting report: the fourth Genomic Standards Consortium (GSC) workshop. (2008) (14)
The IMG/M data management and analysis system v.7: content updates and new features. (2022) (14)
Complete genome sequence of Sanguibacter keddieii type strain (ST-74T) (2009) (14)
Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113T) (2011) (14)
Complete genome sequence of Brachyspira murdochii type strain (56-150T) (2010) (14)
Complete genome sequence of the melanogenic marine bacterium Marinomonas mediterranea type strain (MMB-1T). (2012) (14)
Toward a standard in structural genome annotation for prokaryotes (2015) (14)
Erratum to: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) (2016) (14)
Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075T (2013) (14)
Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228T) (2010) (14)
High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2T (DSM 21788T), a valuable source of polysaccharide decomposing enzymes (2015) (13)
Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1T) (2011) (13)
Complete genome sequence of Mesorhizobium australicum type strain (WSM2073T) (2013) (13)
High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy (2015) (13)
Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSAT) from a deep-sea hydrothermal vent (2011) (13)
Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2T) (2011) (13)
Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain ( 114-95 T ) (2012) (13)
Complete genome sequence of Veillonella parvula type strain (Te3) (2014) (13)
Genome of Methanoregula boonei 6A8 reveals adaptations to oligotrophic peatland environments. (2015) (13)
The DOE JGI Metagenome Workflow (2020) (13)
Complete genome sequence of the moderately thermophilic mineral-sulfide-oxidizing firmicute Sulfobacillus acidophilus type strain (NAL T ) (2012) (12)
Complete genome sequence of Truepera radiovictrix type strain ( RQ-24 T ) (2012) (12)
Permanent draft genome of Thermithiobaclillus tepidarius DSM 3134T, a moderately thermophilic, obligately chemolithoautotrophic member of the Acidithiobacillia (2016) (12)
Complete genome sequence of Syntrophobotulus glycolicus type strain (FlGlyRT) (2011) (12)
Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801T) (2012) (12)
High quality draft genome sequence of Meganema perideroedes str. Gr1T and a proposal for its reclassification to the family Meganemaceae fam. nov. (2015) (12)
Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460T) (2010) (12)
Genome-guided analysis allows the identification of novel physiological traits in Trichococcus species (2020) (12)
Complete genome sequence of Rhodospirillum rubrum type strain (S1) (2014) (12)
Complete genome sequence of Thermomonospora curvata type strain (B9) (2014) (12)
High quality draft genome sequence of Olivibacter sitiensis type strain (AW-6T), a diphenol degrader with genes involved in the catechol pathway (2014) (12)
Complete genome sequence of Jonesia denitrificans type strain (Prevot 55134T) (2009) (12)
Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3) (2010) (12)
Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128T) (2012) (12)
Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10T) (2011) (12)
Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1T) (2012) (12)
Complete genome sequence of Spirosoma linguale type strain ( 1 T ) (2010) (12)
High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China (2014) (12)
Complete genome sequence of Polynucleobacter necessarius subsp . asymbioticus type strain ( QLW-P 1 DMWA-1 T ) (2012) (12)
Complete genome sequence of Kangiella koreensis type strain (SW-125T) (2009) (12)
Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile (2017) (12)
The Integrated Microbial Genomes (IMG) System: A Case Study in Biological Data Management (2005) (12)
Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain NZP2037 (2014) (12)
Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845T) (2009) (12)
Description of Alicyclobacillus montanus sp. nov., a mixotrophic bacterium isolated from acidic hot springs. (2018) (11)
Complete Genome Sequence of Desulfurococcus fermentans, a Hyperthermophilic Cellulolytic Crenarchaeon Isolated from a Freshwater Hot Spring in Kamchatka, Russia (2012) (11)
Draft Genome Sequence of Frankia Strain G2, a Nitrogen-Fixing Actinobacterium Isolated from Casuarina equisetifolia and Able To Nodulate Actinorhizal Plants of the Order Rhamnales (2016) (11)
High quality draft genome sequences of Pseudomonas fulva DSM 17717T, Pseudomonas parafulva DSM 17004T and Pseudomonas cremoricolorata DSM 17059T type strains (2016) (11)
Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva (2013) (11)
Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282T) (2012) (11)
Complete genome sequence of Haloterrigena turkmenica type strain (4k) (2014) (11)
Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279T), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia (2014) (11)
Complete genome sequence of Bacteroides salanitronis type strain (BL78T) (2011) (11)
Hymenobacter artigasi sp. nov., isolated from air sampling in maritime Antarctica. (2020) (11)
Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17 (2013) (11)
Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4 (2013) (11)
Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1 T ) (2012) (11)
Publisher Correction: A genomic catalog of Earth’s microbiomes (2020) (11)
Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812T) (2012) (11)
The “Minimum Information about an ENvironmental Sequence” (MIENS) specification (2010) (11)
Complete genome sequence of Segniliparus rotundus type strain (CDC 1076T) (2010) (11)
High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India (2016) (11)
Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093T) (2012) (10)
A data analysis and coordination center for the human microbiome project (2010) (10)
The Metadata Coverage Index (MCI): A standardized metric for quantifying database metadata richness (2012) (10)
Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov. (2017) (10)
Crowdsourcing and curation: perspectives from biology and natural language processing (2016) (10)
Complete genome sequence of Thermaerobacter marianensis type strain (7p75aT) (2010) (10)
Draft Genome Sequence of Methylocapsa palsarum NE2T, an Obligate Methanotroph from Subarctic Soil (2017) (10)
Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRPT) (2012) (10)
Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1T) (2011) (10)
Complete Genome Sequence of Methanolinea tarda NOBI-1T, a Hydrogenotrophic Methanogen Isolated from Methanogenic Digester Sludge (2014) (10)
Complete genome sequence of Acidaminococcus fermentans type strain (VR4) (2012) (10)
Complete genome sequence of Thermosediminibacter oceani type strain (JW/IW-1228PT) (2010) (10)
Molecular Dialogues between Early Divergent Fungi and Bacteria in an Antagonism versus a Mutualism (2020) (10)
Draft Genome Sequence of the Moderately Halophilic Methanotroph Methylohalobius crimeensis Strain 10Ki (2015) (10)
Complete genome sequence of Brachyspira murdochii type strain (56-150) (2010) (10)
Genome sequence of the exopolysaccharide-producing Salipiger mucosus type strain (DSM 16094T), a moderately halophilic member of the Roseobacter clade (2014) (10)
Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA) (2014) (10)
Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1 (2013) (10)
Complete genome sequence of Catenulispora acidiphila type strain (ID 139908 T ) (2009) (10)
The Positive Role of the Ecological Community in the Genomic Revolution (2006) (10)
Genome Sequence of Porticoccus hydrocarbonoclasticus Strain MCTG13d, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton (2015) (10)
IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata. (2022) (10)
Genome sequence of the Litoreibacter arenae type strain (DSM 19593T), a member of the Roseobacter clade isolated from sea sand (2013) (10)
Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGAT) (2013) (10)
Recombination should not be an afterthought (2020) (10)
Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4 T ) (2012) (10)
Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and “Thermoanaerobacter cellulolyticus” (2015) (10)
Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6T) (2011) (10)
Paenibacillus aquistagni sp. nov., isolated from an artificial lake accumulating industrial wastewater (2017) (10)
Complete genome sequence of Dyadobacter fermentans type strain ( NS 114 T ) (2009) (9)
Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1T) (2010) (9)
High-quality permanent draft genome sequence of the Lebeckia ambigua-nodulating Burkholderia sp. strain WSM4176 (2015) (9)
Complete genome sequence of Paludibacter propionicigenes type strain (WB4) (2011) (9)
Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1AT) (2011) (9)
The complete genome sequence of Clostridium indolis DSM 755T (2014) (9)
Complete genome sequence of Staphylothermus marinus Stetter and Fiala 1986 type strain F1 (2009) (9)
A ferredoxin-like domain in RNA polymerase 30/40-kDa subunits. (1998) (9)
High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460 (2017) (9)
Complete Genome Sequence of Methanoregula formicica SMSPT, a Mesophilic Hydrogenotrophic Methanogen Isolated from a Methanogenic Upflow Anaerobic Sludge Blanket Reactor (2014) (9)
Complete Genome Sequence of Methanosphaerula palustris E1-9CT, a Hydrogenotrophic Methanogen Isolated from a Minerotrophic Fen Peatland (2015) (9)
Complete genome sequence of Desulfurococcus mucosus type strain (O7/1T) (2011) (9)
Bacterial sigma 70 transcription factor DNA-binding domains in the archaeon Methanococcus jannaschii. (1997) (9)
Meeting Report from the Genomic Standards Consortium (GSC) Workshops 6 and 7 (2009) (9)
Author Correction: A genomic catalog of Earth’s microbiomes (2021) (9)
Identification of Protein-Tyrosine Phosphatases in Archaea (1999) (9)
Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122T) (2009) (9)
Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1T) from a deep-sea hydrothermal vent chimney (2012) (9)
The role of zinc in the adaptive evolution of polar phytoplankton (2022) (9)
High-quality-draft genome sequence of the (2017) (9)
High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea (2017) (9)
Nucleic acid-binding metabolic enzymes: Living fossils of stereochemical interactions? (1995) (9)
High-quality permanent draft genome sequence of the Bradyrhizobium elkanii type strain USDA 76T, isolated from Glycine max (L.) Merr (2017) (9)
Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3 T ) (2009) (9)
Genome Sequence of Verrucomicrobium sp. Strain GAS474, a Novel Bacterium Isolated from Soil (2018) (9)
Cryptic inoviruses are pervasive in bacteria and archaea across Earth’s biomes (2019) (8)
Meeting Report from the Genomic Standards Consortium (GSC) Workshop 9 (2010) (8)
Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1T) (2010) (8)
Complete genome sequence of Desulfurococcus mucosus type strain (O7/1) (2014) (8)
Complete genome sequence of Desulfobulbus propionicus type strain ( 1 pr 3 T ) (2011) (8)
Reclassification of a Polynucleobacter cosmopolitanus strain isolated from tropical Lake Victoria as Polynucleobacter victoriensis sp. nov. (2017) (8)
Complete genome sequence of Vulcanisaeta distributa type strain (IC-017T) (2010) (8)
Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH2T) (2011) (8)
Complete genome sequence of Ferrimonas balearica type strain (PATT) (2010) (8)
High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt- and drought-tolerant microsymbiont of Phaseolus vulgaris (2015) (8)
Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A) (2012) (8)
Genome analysis of the marine bacterium Kiloniella laminariae and first insights into comparative genomics with related Kiloniella species (2019) (8)
Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58 (2013) (8)
Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes (2017) (8)
Complete genome sequence of Mesorhizobium ciceri bv . biserrulae type strain ( WSM 1271 T ) (2014) (8)
Complete genome sequence of Weeksella virosa type strain (9751T) (2011) (8)
Meeting report: GSC M5 roundtable at the 13th International Society for Microbial Ecology meeting in Seattle, WA, USA August 22-27, 2010 (2010) (8)
Complete genome sequence of the halophilic and highly halotolerant Chromohalobacter salexigens type strain (1H11) (2012) (8)
Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets (2011) (8)
Microbiomes of Velloziaceae from phosphorus-impoverished soils of the campos rupestres, a biodiversity hotspot (2019) (8)
High quality draft genome sequence of Leucobacter chironomi strain MM2LBT (DSM 19883T) isolated from a Chironomus sp. egg mass (2015) (8)
Illuminating the Virosphere Through Global Metagenomics. (2021) (8)
High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409T with an incomplete denitrification pathway (2016) (8)
Genome Sequence of Halomonas sp. Strain MCTG39a, a Hydrocarbon-Degrading and Exopolymeric Substance-Producing Bacterium (2015) (8)
High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1T Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism (2015) (8)
ThiD-TenA: A Gene Pair Fusion in Eukaryotes (1997) (8)
Complete genome sequence of Tsukamurella paurometabola type strain (no. 33T) (2011) (8)
Impact of soil salinity on the cowpea nodule-microbiome and the isolation of halotolerant PGPR strains to promote plant growth under salinity stress (2019) (8)
Complete genome sequence of Marinomonas posidonica type strain (IVIA-Po-181T) (2012) (7)
Complete genome sequence of Xylanimonas cellulosilytica type strain (XIL07T) (2010) (7)
Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds (2017) (7)
Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1T) (2010) (7)
Complete genome sequence of Hirschia baltica type strain (IFAM 1418T) (2011) (7)
Complete genome sequence of Arcanobacterium haemolyticum type strain (11018T) (2010) (7)
Complete genome sequence of Dyadobacter fermentans type strain (NS114 T ) (2009) (7)
Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach (2009) (7)
Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaero.. (2012) (7)
Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1 T ) (2011) (7)
Metagenome Sequencing to Explore Phylogenomics of Terrestrial Cyanobacteria (2021) (7)
Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005T (2013) (7)
Complete genome sequence of Methanoplanus petrolearius type strain (SEBR 4847) (2014) (7)
Complete genome sequence of Sulfurimonas autotrophica type strain ( OK 10 T ) (2010) (7)
Complete genome sequence of Bacteroides helcogenes type strain (P 36-108T) (2011) (7)
Complete genome sequence of Halopiger xanaduensis type strain (SH-6T) (2012) (7)
Complete genome sequence of the lignin-degrading bacterium Klebsiella sp. strain BRL6-2 (2014) (7)
Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens (2013) (7)
Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium (2017) (7)
Complete genome sequence of Archaeoglobus profundus type strain (AV18) (2014) (7)
Complete genome sequence of Mahella australiensis type strain (50-1 BONT) (2011) (7)
Complete genome sequence of Sebaldella termitidis type strain ( NCTC 11300 T ) (2010) (7)
Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI943. (2013) (6)
Complete genome sequence of Kribbella flavida type strain (IFO 14399T) (2010) (6)
Complete genome sequence of Leadbetterella byssophila type strain (4M15) (2011) (6)
Non-contiguous finished genome sequence of Bacteroides coprosuis type strain (PC139T) (2011) (6)
Genome Sequence of Polycyclovorans algicola Strain TG408, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton (2015) (6)
Improved Draft Genome Sequence of Pseudomonas poae A2-S9, a Strain with Plant Growth-Promoting Activity (2019) (6)
Complete genome sequence of Thermosediminibacter oceani type strain (JW/IW-1228P T ) (2010) (6)
Complete Genome Sequence of the Hyperthermophilic Sulfate-Reducing Bacterium Thermodesulfobacterium geofontis OPF15T (2013) (6)
High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5T) (2013) (6)
Genome sequence of Leisingera nanhaiensis strain DSM 24252 T isolated from marine sediment (2014) (6)
Complete genome sequence of Arcanobacterium haemolyticum type strain (11018) (2010) (6)
Complete genome sequence of Weeksella virosa type strain (9751) (2012) (6)
Complete genome sequence of the gliding , heparinolytic Pedobacter saltans type strain ( 113 T ) (2012) (6)
Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake (2015) (6)
Complete genome sequence of Staphylothermus hellenicus P8T (2011) (6)
Reverse interpretation: a hypothetical selection mechanism for adaptive mutagenesis based on autoregulated mRNA stability. (1994) (6)
Complete genome sequence of Desulfohalobium retbaense type strain ( HR 100 T ) (2010) (6)
High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1T, a gammaproteobacterium isolated from estuarine sediment (2016) (6)
Erratum to: Permanent draft genome of Thermithiobacillus tepidarius DSM 3134T, a moderately thermophilic, obligately chemolithoautotrophic member of the Acidithiobacillia (2016) (6)
Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL) (2013) (6)
Complete genome sequence of Marivirga tractuosa type strain (H-43 T ) (2011) (6)
Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460) (2010) (6)
Genome sequence of Microvirga lupini strain LUT6T, a novel Lupinus alphaproteobacterial microsymbiont from Texas (2014) (5)
Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1) (2012) (5)
Structural characterization of a soil viral auxiliary metabolic gene product – a functional chitosanase (2022) (5)
Complete genome sequence of Ignisphaera aggregans type strain ( AQ 1 . S 1 T ) (2010) (5)
Complete genome sequence of the bile-resistant pigment-producing anaerobe Alistipes finegoldii type strain (AHN2437T) (2013) (5)
Draft Genome Sequence of an Oscillatorian Cyanobacterium, Strain ESFC-1 (2013) (5)
Complete genome sequence of Mesorhizobium australicum type strain ( WSM 2073 T ) (2014) (5)
Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701T) and emended description of the genus Thermanaerovibrio (2013) (5)
Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477T) (2016) (5)
Meeting Report from the Genomic Standards Consortium (GSC) Workshop 10 (2010) (5)
Draft genome of Rosenbergiella nectarea strain 8N4T provides insights into the potential role of this species in its plant host (2020) (5)
High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512 (2015) (5)
Complete genome sequence of Mesorhizobium opportunistum type strain WSM 2075 T (2014) (5)
Complete genome sequence of Intrasporangium calvum type strain (7 KIP T ) (2011) (5)
Draft Genome Sequence of Heavy Metal-Resistant Cupriavidus alkaliphilus ASC-732T, Isolated from Agave Rhizosphere in the Northeast of Mexico (2016) (5)
Complete genome sequence of Bacteroides salanitronis type strain (BL78) (2014) (5)
Complete genome sequence of Coriobacterium glomerans type strain (PW2T) from the midgut of Pyrrhocoris apterus L. (red soldier bug) (2013) (5)
Genome sequence of the Thermotoga thermarum type strain (LA3T) from an African solfataric spring (2014) (5)
Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution (2021) (5)
Genome sequence of Shimia str. SK013, a representative of the Roseobacter group isolated from marine sediment (2016) (5)
An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1T (2016) (5)
Genome sequence of Ensifer arboris strain LMG 14919T; a microsymbiont of the legume Prosopis chilensis growing in Kosti, Sudan (2013) (5)
Complete genome sequence of Intrasporangium calvum type strain (7 KIPT) (2010) (5)
Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRP T ) (2012) (5)
Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring. (2017) (5)
Complete genome sequence of Coraliomargarita akajimensis type strain ( 04 OKA 010-24 T ) (2010) (5)
Complete genome sequence of Tolumonas auensis type strain (TA 4T) (2011) (5)
Complete genome sequence of Saccharomonospora viridis type strain ( P 101 T ) (2009) (5)
Genome sequence of the Medicago-nodulating Ensifer meliloti commercial inoculant strain RRI128 (2014) (5)
Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2230 from Karijini National Park, Australia (2013) (5)
Complete genome sequence of Actinosynnema mirum type strain ( 101 T ) (2009) (5)
Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton (2016) (5)
Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4 (2015) (5)
Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan (2021) (5)
Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9. (2022) (5)
Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium (2019) (5)
[Facile Recoding of Selenocysteine in Nature]. (2016) (5)
Complete genome sequence of Bacteroides helcogenes type strain (P 36-108) (2012) (4)
Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252T isolated from marine sediment (2014) (4)
Corrigendum: Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato (2018) (4)
High-quality permanent draft genome sequence of Bradyrhizobium sp. Tv2a.2, a microsymbiont of Tachigali versicolor discovered in Barro Colorado Island of Panama (2015) (4)
Meeting report of the RNA Ontology Consortium January 8-9, 2011 (2011) (4)
Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL) (2014) (4)
High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India (2015) (4)
Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources (2019) (4)
Partial genome sequence of Thioalkalivibrio thiocyanodenitrificans ARhD 1T, a chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium capable of complete denitrification (2015) (4)
Thousands of small, novel genes predicted in global phage genomes. (2022) (4)
Consent insufficient for data release—Response (2019) (4)
Draft Genome Sequence of the Cellulolytic and Xylanolytic Thermophile Clostridium clariflavum Strain 4-2a (2015) (4)
Draft Genome Sequence of Pseudomonas azotifigens Strain DSM 17556T (6H33bT), a Nitrogen Fixer Strain Isolated from a Compost Pile (2013) (4)
High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698) (2017) (4)
Meeting Report: Towards a Critical Assessment of Functional Annotation Experiment (CAFAE) for bacterial genome annotation (2010) (4)
Complete moderate thermophile Anaerobaculum mobile type strain (NGA(T)). (2013) (4)
Genome Sequence and Analysis of the Soil Cellulolytic Actinomycete Thermobifida fusca (2007) (4)
Complete genome sequence of Olsenella uli type strain (VPI D76D-27C T ) (2010) (4)
Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia (2013) (4)
One Complete and Seven Draft Genome Sequences of Subdivision 1 and 3 Acidobacteria Isolated from Soil (2020) (4)
Giant virus diversity and host interactions through global metagenomics (2020) (4)
Complete genome sequence of Oceanithermus profundus type strain (506T) (2011) (4)
Draft genome sequence of the cellulolytic endophyte Chitinophaga costaii A37T2T (2017) (4)
Genome sequence of the lupin-nodulating Bradyrhizobium sp. strain WSM1417 (2013) (4)
Complete genome sequence of Haliscomenobacter hydrossis type strain (O T ) (2011) (4)
High-Quality Draft Genomes from Thermus caliditerrae YIM 77777 and T. tengchongensis YIM 77401, Isolates from Tengchong, China (2016) (4)
Draft Genome Sequences of Three Strains of a Novel Rhizobiales Species Isolated from Forest Soil (2018) (4)
Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials (2019) (4)
Genome sequence of Burkholderia mimosarum strain LMG 23256T, a Mimosa pigra microsymbiont from Anso, Taiwan (2013) (4)
Complete genome sequence of Leadbetterella byssophila type strain ( 4 M 15 T ) (2011) (4)
Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557T (2013) (4)
Absence of Genome Reduction In Diverse (2016) (4)
Complete Genome Sequence of Nitrosomonas cryotolerans ATCC 49181, a Phylogenetically Distinct Ammonia-Oxidizing Bacterium Isolated from Arctic Waters (2017) (4)
Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 (2014) (4)
Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055T) (2013) (4)
Genome sequence of the Wenxinia marina type strain (DSM 24838T), a representative of the Roseobacter group isolated from oilfield sediments (2014) (4)
Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI565. (2013) (4)
Complete genome sequence of Thermaerobacter marianensis type strain (7p75a) (2014) (3)
Complete genome sequence of Kribbella flavida type strain ( IFO 14399 T ) (2010) (3)
Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome (2022) (3)
Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T) (2012) (3)
Complete genome sequence of Halopiger xanaduensis type strain (SH-6) (2013) (3)
Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134T) (2013) (3)
High-quality draft genome sequences of Pseudomonas monteilii DSM 14164T, Pseudomonas mosselii DSM 17497T, Pseudomonas plecoglossicida DSM 15088T, Pseudomonas taiwanensis DSM 21245T and Pseudomonas vranovensis DSM 16006T: taxonomic considerations (2019) (3)
High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland (2015) (3)
Genome Sequence of the Alkaline-Tolerant Cellulomonas sp. Strain FA1 (2015) (3)
Erratum to: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377T) (2010) (3)
Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113) (2011) (3)
Complete genome sequence of Methanothermus fervidus type strain (V24S T ) (2011) (3)
High quality draft genome sequence of Bacteroides barnesiae type strain BL2T (DSM 18169T) from chicken caecum (2015) (3)
Complete genome sequence of Conexibacter woesei type strain ( ID 131577 T ) (2010) (3)
Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1 T ) (2010) (3)
Complete genome sequence of Calditerrivibrio nitroreducens type strain ( Yu 37-1 T ) (2011) (3)
High-quality permanent draft genome sequence of the extremely osmotolerant diphenol degrading bacterium Halotalea alkalilenta AW-7T, and emended description of the genus Halotalea (2015) (3)
Anabaena variabilis ATCC 29413 (2014) (3)
Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos (2015) (3)
High-quality permanent draft genome sequence of the Mimosa asperata - nodulating Cupriavidus sp. strain AMP6 (2015) (3)
Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. (2013) (3)
Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6) (2014) (3)
Complete genome sequence of Nitratifractor salsuginis type strain ( E 9 I 37-1 T ) (2011) (3)
Insights into the dynamics between viruses and their hosts in a hot spring microbial mat (2020) (3)
MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources (2016) (3)
High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym (2015) (3)
Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium indicus type strain (CIR29812(T)). (2012) (3)
Hymenobacter caeli sp. nov., an airborne bacterium isolated from King George Island, Antarctica. (2021) (3)
Establishment of computational biology in Greece and Cyprus: Past, present, and future (2019) (3)
Complete genome sequence of the facultatively anaerobic , appendaged bacterium Muricauda restringensis type strain ( B 1 T ) (2012) (3)
High-quality draft genome sequence of Gracilimonas tropica CL-CB462T (DSM 19535T), isolated from a Synechococcus culture (2015) (3)
Complete genome sequence of strain HIMB 100 , a cultured representative of the SAR 116 clade of marine Alphaproteobacteria (2011) (3)
Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes (2018) (3)
Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca (2016) (3)
Multiomics in the central Arctic Ocean for benchmarking biodiversity change (2022) (3)
Complete genome sequence of Beutenbergia cavernae type strain (2009) (3)
South American clover Trifolium polymorphum (2010) (3)
High-Quality Draft Genome Sequences of Eight Bacteria Isolated from Fungus Gardens Grown by Trachymyrmex septentrionalis Ants (2018) (3)
The Roseibium album (Labrenzia alba) Genome Possesses Multiple Symbiosis Factors Possibly Underpinning Host-Microbe Relationships in the Marine Benthos (2021) (3)
Metagenomes and Metatranscriptomes of a Glucose-Amended Agricultural Soil (2020) (3)
Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2T (2015) (3)
Improved Draft Genome Sequence of Microbacterium sp. Strain LKL04, a Bacterial Endophyte Associated with Switchgrass Plants (2019) (3)
Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece (2013) (3)
Complete genome sequence of Thermocrinis albus type strain (HI 11/12) (2014) (3)
Draft Genome Sequences of New Isolates and the Known Species of the Family Microbacteriaceae Associated with Plants (2018) (2)
Complete genome sequence of ‘Thermobaculum terrenum’ type strain (YNP1 T ) (2010) (2)
Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1) (2012) (2)
Genome Sequences of Actinobacteria from Extreme Environments in Colombia (2018) (2)
Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597 (2013) (2)
Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda restringensis type strain (B1 T ) (2012) (2)
Complete genome sequence of Ferrimonas balearica type strain (PAT) (2010) (2)
SOP for pathway inference in Integrated Microbial Genomes (IMG) (2010) (2)
Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7 (2016) (2)
High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk (2017) (2)
Complete genome sequence of Tsukamurella paurometabola type strain (no. 33) (2012) (2)
High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884T) isolated from a Chironomus sp. egg mass (2015) (2)
Plant microbiomes harbor potential to promote nutrient turnover in impoverished substrates of a Brazilian biodiversity hotspot (2022) (2)
Complete genome sequence of Oceanithermus profundus type strain (506) (2011) (2)
Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample (2017) (2)
Complete genome sequence of Cryptobacterium curtum type strain (12-3 T ) (2009) (2)
High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS 11 T ( DSM 29698 ) (2017) (2)
Isolation of potential plant growth-promoting bacteria from nodules of legumes grown in arid Botswana soil (2020) (2)
Mining metatranscriptomes reveals a vast world of viroid-like circular RNAs (2023) (2)
Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533T, a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia (2017) (2)
Author Correction: Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes (2020) (2)
Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Workshop at the Pacific Symposium on Biocomputing 2010 (2010) (2)
Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692T) from the alkaline Lake Magadi in the East African Rift (2013) (2)
Non-contiguous finished genome sequence of the opportunistic oral pathogen Prevotella multisaccharivorax type strain (PPPA20T) (2011) (2)
Complete genome sequence of Tolumonas auensis type strain ( TA 4 T ) (2011) (2)
Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland (2016) (2)
High-quality permanent draft genome sequence of Ensifer medicae strain WSM244, a microsymbiont isolated from Medicago polymorpha growing in alkaline soil (2015) (2)
Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence (2017) (2)
Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252 T isolated from marine sediment (2014) (2)
Complete genome sequence of Mahella australiensis type strain (50-1 BON T ) (2011) (2)
Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom (2019) (2)
High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia (2017) (2)
Complete Genome Sequence of Thermoanaerobacterium sp. Strain RBIITD, a Butyrate- and Butanol-Producing Thermophile (2018) (2)
High-Quality Draft Genome Sequence of Desulfovibrio carbinoliphilus FW-101-2B, an Organic Acid-Oxidizing Sulfate-Reducing Bacterium Isolated from Uranium(VI)-Contaminated Groundwater (2015) (2)
Complete genome sequence of Weeksella virosa type strain (9751 T ) (2011) (2)
High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York (2015) (1)
High-quality draft genome sequence of Gracilimonas tropica CL-CB462T (DSM 19535T), isolated from a Synechococcus culture (2015) (1)
High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Burkholderia sp. strain UYPR1.413 (2015) (1)
The 15th Genomic Standards Consortium meeting (2013) (1)
High quality draft genome sequences of Pseudomonas fulva DSM 17717 T , Pseudomonas parafulva DSM 17004 T and Pseudomonas cremoricolorata DSM 17059 T type strains (2016) (1)
The Metadata Coverage Index ( MCI ) : A standardized metric for quantifying database annotation richness (2012) (1)
Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy (2014) (1)
The core histone fold: Limits to functional versatility (1996) (1)
Permanent draft genome of Thiobacillus thioparus DSM 505T, an obligately chemolithoautotrophic member of the Betaproteobacteria (2017) (1)
A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey (2015) (1)
The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host (2022) (1)
The Santorini Volcanic Complex as a Valuable Source of Enzymes for Bioenergy (2021) (1)
Genome Sequence of Roseovarius sp. Strain MCTG156(2b) Isolated from a Phytoplankton Net Trawl on the Scottish West Coast (2017) (1)
Complete genome sequence of the acetate-degrading sulfate reducer Desulfobacca acetoxidans type strain (ASRB2) (2012) (1)
Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1) (2012) (1)
Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome (2020) (1)
Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm (2016) (1)
Genome sequence of the Lotus corniculatus microsymbiont Mesorhizobium loti strain R88B (2014) (1)
The genome sequence of the vovel rhizobial species Microvirga lotononidis strain WSM3557T (2015) (1)
A vast world of viroid-like circular RNAs revealed by mining metatranscriptomes (2022) (1)
Genome sequence of Ensifer medicae strain WSM1369; an effective microsymbiont of the annual legume Medicago sphaerocarpos (2013) (1)
Genome Sequence of Marinobacter sp. Strain MCTG268 Isolated from the Cosmopolitan Marine Diatom Skeletonema costatum (2016) (1)
The genome of obligately intracellular Ehrlichia canis reveals themes of complex membrane structure and immune evasion strategies (2006) (1)
Expanding the genomic encyclopedia of Actinobacteria with 824 isolate reference genomes (2022) (1)
Genome sequence and analysis of Thermobifida fusca YX (2006) (1)
Complete genome sequence of Leptotrichia buccalis type strain (C-1013-b T ) (2009) (1)
Complete genome sequence of Desulfohalobium retbaense type strain (HR100) (2014) (1)
High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556T (2015) (1)
Plant-associated microbiomes promote nutrient turnover in impoverished substrates of a biodiversity hotspot (2021) (1)
Microbial Dark Matter Phase II: Stepping deeper into unknown territory (2014) (1)
Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression (2017) (1)
A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T (2012) (1)
Complete genome sequence of Methanothermus fervidus type strain ( V 24 ST ) (2011) (1)
A synthesis of bacterial and archaeal phenotypic trait data (2020) (1)
High-quality permanent draft genome sequence of Bradyrhizobium sp. strain WSM1743 - an effective microsymbiont of an Indigofera sp. growing in Australia (2015) (1)
Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake (2015) (1)
Lawrence Berkeley National Laboratory Recent Work Title Permanent draft genome of Thermithiobaclillus tepidarius DSM 3134 T , a moderately thermophilic , obligately chemolithoautotrophic member of the Acidithiobacillia Permalink (2016) (1)
Microbial Benthic Communities in the Aegean Sea (2020) (1)
Draft Genome Sequence of Monaibacterium marinum C7T, Isolated from Seawater from the Menai Straits, Wales, United Kingdom (2018) (1)
Thermotoga thermarum (2014) (1)
Erratum to: Complete genome sequence of Atopobium parvulum type strain (IPP 1246T) (2010) (1)
Genome sequence of Frateuria aurantia type strain (Kondô 67T), a xanthomonade isolated from Lilium auratium Lindl. (2013) (1)
Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain NZP2037 (2014) (1)
High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395T (DSM 45146T) (2015) (1)
Medicago root nodule microbiomes: insights into a complex ecosystem with potential candidates for plant growth promotion (2021) (1)
Permanent Draft Genome Sequence of Nocardia sp. BMG111209, an Actinobacterium Isolated from Nodules of Casuarina glauca (2016) (1)
High-quality permanent draft genome sequence of the Bradyrhizobium elkanii type strain USDA 76T, isolated from Glycine max (L.) Merr (2017) (1)
Aalborg Universitet High quality draft genome sequence of Meganema perideroedes str . Gr 1 T and a proposal for its reclassification to the family Meganemaceae fam (2017) (1)
Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes (2016) (1)
Complete genome sequence of the bile-resistant pigment- producing anaerobe Alistipes finegoldii type strain (2013) (1)
High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods (2016) (1)
High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica (2015) (1)
Complete genome sequence of Cellulophaga algicola type strain (IC166 T ) (2011) (1)
Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH2) (2011) (1)
Stop Codon Reassignment in the Wild (2014) (1)
Frigoriflavimonas asaccharolytica gen. nov., sp. nov., a novel psychrophilic esterase and protease producing bacterium isolated from Antarctica (2021) (1)
Alive and well at 100 (2011) (1)
Complete genome sequence of Paludibacter propionicigenes type strain (WB4 T ) (2011) (1)
Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain R7A (2014) (1)
Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica (2017) (1)
Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China (2015) (1)
Extreme-Scale Many-against-Many Protein Similarity Search (2022) (1)
High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T (2016) (1)
Draft genome sequences of Bradyrhizobium shewense sp. nov. ERR11T and Bradyrhizobium yuanmingense CCBAU 10071T (2017) (1)
Microbiomes of Velloziaceae from phosphorus-impoverished soils of the campos rupestres, a biodiversity hotspot (2019) (1)
Lawrence Berkeley National Laboratory Recent Work Title Permanent draft genome sequence of Nocardia sp . BMG 111209 , an actinobacterium isolated from nodules of Casuarina glauca Permalink (2016) (0)
Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation (2020) (0)
Lawrence Berkeley National Laboratory Recent Work Title Towards a balanced view of the bacterial tree of life Permalink (2017) (0)
Promoting, understanding, recording, and utilizing metadata in genomic/metagenomic studies (2014) (0)
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) (2015) (0)
Bringing large-scale multiple genome analysis one step closer: ScalaBLAST and beyond (2009) (0)
Publisher Correction: A genomic catalog of Earth’s microbiomes (2020) (0)
High-quality permanent draft genome sequence of the Lebeckia ambigua-nodulating Burkholderia sp. strain WSM4176 (2015) (0)
of ilyis sp. nov. by combined physiological and in silico genome hybridization analyses. (2016) (0)
Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1 T , an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda (2015) (0)
Influence of the polar light cycle on seasonal dynamics of an Antarctic lake microbial community (2020) (0)
High-quality permanent draft genome sequence of Ensifer medicae strain WSM244, a microsymbiont isolated from Medicago polymorpha growing in alkaline soil (2015) (0)
MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources (2016) (0)
Quality assessment of predicted gene models in microbial genomes (2005) (0)
High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India (2016) (0)
Draft genome sequence of type strain HBR26T and description of Rhizobium aethiopicum sp. nov. (2017) (0)
Comparative Metagenomics of Microbial Communities from Pristine and Contaminated Groundwater (2008) (0)
Complete genome sequence of Bacteroides helcogenes type strain (P 36-108 T ) (2011) (0)
High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Burkholderia sp. strain UYPR1.413 (2015) (0)
Lawrence Berkeley National Laboratory Lawrence Berkeley National Laboratory Title Genomics of Aerobic Cellulose Utilization Systems in Actinobacteria Permalink (2012) (0)
High-quality permanent draft genome sequence of Bradyrhizobium sp. strain WSM1743 - an effective microsymbiont of an Indigofera sp. growing in Australia (2015) (0)
Draft genome of TNe-841 , a free-living, nitrogen-fixing, tomato plant-associated bacterium. (2017) (0)
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment (2020) (0)
Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598 (2014) (0)
Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring (2017) (0)
Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica (2017) (0)
Genome Sequencing Suggests Diverse Secondary Metabolism in Coral-Associated Aquimarina megaterium (2022) (0)
Standardized naming of microbiome samples in Genomes OnLine Database (2023) (0)
Murine colitis reveals a disease-associated bacteriophage community (2018) (0)
Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland (2016) (0)
Complete Genome Sequence of Serratia quinivorans Strain 124R, a Facultative Anaerobe Isolated on Organosolv Lignin as a Sole Carbon Source (2019) (0)
You can move, but you can’t hide: identification of mobile genetic elements with geNomad (2023) (0)
Lawrence Berkeley National Laboratory Recent Work Title Draft genome sequence of Dethiobacter alkaliphilus strain AHT 1 T , a gram-positive sulfidogenic polyextremophile Permalink (2017) (0)
High quality draft genome sequence of Bacteroides barnesiae type strain BL2T (DSM 18169T) from chicken caecum (2015) (0)
Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA T ) (2013) (0)
High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland (2015) (0)
Small Antisense Regulatory RNA Genes in Bacterial Genomes (2006) (0)
High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk (2017) (0)
Introduction to Metagenomics at DOE JGI (Opening Remarks for the Metagenomics Informatics Challenges Workshop: 10K Genomes at a Time) (2011) (0)
Genomics, Evolution and Evolution of Genomics (2009) (0)
Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis (2018) (0)
High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884T) isolated from a Chironomus sp. egg mass (2015) (0)
High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1T Isolated from Great Boiling Spring, Nevada (2016) (0)
The evolution of microbial species - a view through the genomic lens (2014) (0)
Genome sequence of Ensifer medicae Di28; an effective N2-fixing microsymbiont of Medicago murex and M. polymorpha (2014) (0)
High-quality permanent draft genome sequence of Bradyrhizobium sp. Tv2a.2, a microsymbiont of Tachigali versicolor discovered in Barro Colorado Island of Panama (2015) (0)
Steinernema hermaphroditum as a novel genetic model to study nematode-bacteria symbiosis (2021) (0)
High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395T (DSM 45146T) (2015) (0)
Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium (2017) (0)
Identifying the micro from the peta: tales of big data in the micro world (2017) (0)
New insights from uncultivated genomes of the global human gut microbiome (2019) (0)
Methanoplanus limicola DSM 2279T (2014) (0)
Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system (2016) (0)
IMG-ABC: An Atlas of Biosynthetic Gene Clusters to Fuel the Discovery of Novel Secondary Metabolites (2014) (0)
Partial genome sequence of Thioalkalivibrio thiocyanodenitrificans ARhD 1T, a chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium capable of complete denitrification (2015) (0)
High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia (2017) (0)
Lawrence Berkeley National Laboratory Recent Work Title HipMCL : a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks (2018) (0)
Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains (2015) (0)
High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556T (2015) (0)
Lawrence Berkeley National Laboratory Recent Work Title Genome data provides high support for generic boundaries in Burkholderia sensu lato Permalink (2018) (0)
Integrated OMICs analysis in IMG and IMG/M (2014) (0)
Protein interactionmaps forcomplete genomesbasedongenefusionevents (1999) (0)
Medicago root nodule microbiomes: insights into a complex ecosystem with potential candidates for plant growth promotion (2021) (0)
Erratum to: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) (2016) (0)
Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil (2016) (0)
Prosopis chilensis growing in Kosti , Sudan (2014) (0)
Erratum to: Permanent draft genome of Thermithiobacillus tepidarius DSM 3134T, a moderately thermophilic, obligately chemolithoautotrophic member of the Acidithiobacillia (2016) (0)
Testing the fidelity of assembly, binning and gene calling in metagenomes (2006) (0)
Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T) (2012) (0)
High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica (2015) (0)
High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India (2015) (0)
Draft genome sequence of marine alphaproteobacterial strain HIMB 11 , the first cultivated representative of a unique lineage within the Roseobacter clade possessing (2014) (0)
Complete genome sequence of Methanospirillum hungatei type strain JF1 (2016) (0)
Proposal for Open Discussion - Informatics Challenges for Next Generation Sequencing Metagenomics Experiments (2018) (0)
Towards a balanced view of the bacterial tree of life (2017) (0)
US DOE Joint Genome Institute Microbial Sequencing: Genomes to Life Projects (2006) (0)
Integrated Microbial Genomes: From Genomes to Metagenomes (2006) (0)
Complete genome sequence of the bile-resistant pigment- producing anaerobe Alistipes finegoldii type strain (AHN2437) (2013) (0)
Lawrence Berkeley National Laboratory Recent Work Title High-quality permanent draft genome sequence of the Bradyrhizobium elkanii type strain USDA 76 T , isolated from Glycine max ( L . ) Merr Permalink (2017) (0)
Complete genome sequence of Arcanobacterium haemolyticum type strain (11018 T ) (2010) (0)
The Korarchaeota: Archaeal orphans representing an ancestral lineage of life (2007) (0)
Discovery of a novel filamentous prophage in the genome of the Mimosa pudica microsymbiont Cupriavidus taiwanensis STM 6018 (2023) (0)
Lawrence Berkeley National Laboratory Recent Work Title Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1 T , an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake Permalink (2015) (0)
High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods (2016) (0)
Correction to: Towards a balanced view of the bacterial tree of life (2017) (0)
On the fidelity of assembly, binning and gene calling of metagenomes using simulated datasets (2006) (0)
Author Correction: A genomic catalog of Earth’s microbiomes (2021) (0)
Sodalis ligni Strain 159R Isolated from an Anaerobic Lignin-Degrading Consortium (2022) (0)
The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4) (2016) (0)
Draft genome sequence of Chryseobacterium limigenitum SUR2T (LMG 28734T) isolated from dehydrated sludge (2017) (0)
Genome sequence of Shimia str. SK013, a representative of the Roseobacter group isolated from marine sediment (2016) (0)
Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds (2017) (0)
Integrated Microbial Genomes genomic data analysis system (2005) (0)
Ontogrator web application for marking up data (2011) (0)
High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409T with an incomplete denitrification pathway (2016) (0)
Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe (2022) (0)
Large-scale contamination of microbial isolate genomes by Illumina PhiX control (2015) (0)
Diversity, evolution, and classification of virophages uncovered through global metagenomics (2019) (0)
Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources (2019) (0)
A GSC Global Genome Census (GSC8 Meeting) (2009) (0)
Comparative genomic and physiological analysis of Trichococcus species (2016) (0)
Archaeal Diversity Sequencing Project: Preliminary Results (2006) (0)
Metagenomes from Experimental Hydrologic Manipulation of Restored Coastal Plain Wetland Soils (Tyrell County, North Carolina) (2020) (0)
Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T ) (2011) (0)
COVID-19 pandemic reveals the peril of ignoring metadata standards (2020) (0)
Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252 isolated from marine sediment (2014) (0)
Flash Updates of GSC projects (GSC8 Meeting) (2009) (0)
Genome sequence of Ensifer medicae Di28; an effective N2-fixing microsymbiont of Medicago murex and M. polymorpha (2014) (0)
NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks (2017) (0)
High quality draft genome sequence of Corynebacterium ulceribovis type strain (2015) (0)
Comparative metagenomics of hydrocarbon and methane seeps of the Gulf of Mexico (2017) (0)
Integrated Microbial Genomes (IMG): New Data and Functionality in Version 1.2 (2005) (0)
Identifying candidate structured RNAs in CRISPR operons (2022) (0)
Göker, M. et al.Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279(T)), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended (2014) (0)
authors inadvertently ommitted from the original version of the paper (2011) (0)
Author Correction: Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes (2020) (0)
Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential (2018) (0)
Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile (2017) (0)
New metagenomic insights into the octocoral microbiome (2021) (0)
Classification and general features of “ Enterobacter lignolyticus ” SCF 1 MIGS ID Property Term Evidence code Current classification Domain Bacteria (2011) (0)
Lawrence Berkeley National Laboratory Recent Work Title High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482 T , isolated from raw cow milk Permalink (2017) (0)
Towards a Library of Standard Operating Procedures (SOPs) for (meta)genomic annotation (2008) (0)
High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698) (2017) (0)
Complete genome sequence of Vulcanisaeta distributa type strain (IC-017 T ) (2011) (0)
microsymbiont Mesorhizobium loti strain R 7 A (2014) (0)
Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477T) (2016) (0)
Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRP) (2012) (0)
Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2T (2015) (0)
High-quality permanent draft genome sequence of the extremely osmotolerant diphenol degrading bacterium Halotalea alkalilenta AW-7T, and emended description of the genus Halotalea (2015) (0)
Correction to: Towards a balanced view of the bacterial tree of life (2017) (0)
High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea (2017) (0)
Lawrence Berkeley National Laboratory Recent Work Title High-quality draft genome sequence of Ensifer meliloti Mlalz-1 , a microsymbiont of Medicago laciniata ( L . ) miller collected in Lanzarote , Canary Islands , Spain Permalink (2017) (0)
High quality draft genome sequence of Meganema perideroedes str. Gr1T and a proposal for its reclassification to the family Meganemaceae fam. nov. (2015) (0)
Lawrence Berkeley National Laboratory Recent Work Title Paenibacillus aquistagni sp . nov . , isolated from an artificial lake accumulating industrial wastewater Permalink (2017) (0)
Improved Draft Genome Sequence of Bacillus sp. Strain YF23, Which Has Plant Growth-Promoting Activity (2019) (0)
Genome sequence of the Ornithopus/Lupinus-nodulating Bradyrhizobium sp. strain WSM471 (2013) (0)
Gene Calling Standards (GSC8 Meeting) (2009) (0)
An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1T (2016) (0)
Lawrence Berkeley National Laboratory Recent Work Title Supporting community annotation and user collaboration in the integrated microbial genomes ( IMG ) system Permalink (2016) (0)
High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym (2015) (0)
The Integrated Microbial Genomes system for analysis of Genomic and Metagenomic Data (2006) (0)
Antisense RNA genes in bacterial genomes (2006) (0)
Paenibacillus aquistagni sp. nov., isolated from an artificial lake accumulating industrial wastewater (2017) (0)
Meeting Report from the Genomic Standards Consortium (GSC) Workshop 8 (2010) (0)
Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals (2021) (0)
Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1 T ) (2011) (0)
High-quality draft genome sequence of Ensifer meliloti Mlalz-1, a microsymbiont of Medicago laciniata (L.) miller collected in Lanzarote, Canary Islands, Spain (2017) (0)
Draft genome sequence of Dethiobacter alkaliphilus strain AHT 1 ( T ) , a gram-positive sulfidogenic (2017) (0)
The US DOE Joint Genome Institute Microbial Genome Program (2005) (0)
Genome sequence of the pink–pigmented marine bacterium Loktanella hongkongensis type strain (UST950701–009PT), a representative of the Roseobacter group (2015) (0)
The Joint Genome Institute Offers Resources Beyond a Core Facility: JGI now partners with thousands of scientists worldwide to broaden and deepen its research capabilities (2015) (0)
Genome-guided analysis allows the identification of novel physiological traits in Trichococcus species (2020) (0)
Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug (2020) (0)
Draft genome sequence of Dethiobacter strain AHT1T, a gram-positive sulfidogenic polyextremophile. (2017) (0)
Lawrence Berkeley National Laboratory Recent Work Title RNA-dependent cysteine biosynthesis in bacteria and archaea (2017) (0)
Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring (2017) (0)
Genome sequence of the pink–pigmented marine bacterium Loktanella hongkongensis type strain (UST950701–009PT), a representative of the Roseobacter group (2015) (0)
High quality draft genome sequences of Pseudomonas fulva DSM 17717T, Pseudomonas parafulva DSM 17004T and Pseudomonas cremoricolorata DSM 17059T type strains (2016) (0)
Toward a standard in structural genome annotation for prokaryotes (2015) (0)
Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos (2015) (0)
Resource Large-Scale Analyses of HumanMicrobiomes Reveal Thousands of Small , Novel Genes Graphical (2019) (0)
Digital Research: Microbial Genomics (2011) (0)
Microbes cooperate to produce energy during methanogenesis (2020) (0)
Draft genome sequence of the cellulolytic endophyte Chitinophaga costaii A37T2T (2017) (0)
High-quality permanent draft genome sequence of the Mimosa asperata - nodulating Cupriavidus sp. strain AMP6 (2015) (0)
High-quality draft genome sequence of Ensifer meliloti Mlalz-1, a microsymbiont of Medicago laciniata (L.) miller collected in Lanzarote, Canary Islands, Spain (2017) (0)
DSM22704TDesulfosporosinus acidiphilus Desulfosporosinus meridiei DSM13257T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus orientis DSM765T, Complete Genome Sequences of (2013) (0)
A thermostable Cas9 with increased lifetime in human plasma (2017) (0)
Strains of the Genus Methylobacterium Complete Genome Sequences of Six (2012) (0)
Lawrence Berkeley National Laboratory Recent Work Title Draft genome sequence of type strain HBR 26 T and description of Rhizobium aethiopicum sp (2017) (0)
High-quality draft genome sequence of Flavobacterium suncheonense GH29-5 T (DSM 17707 T ) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5 T (2016) (0)
High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt- and drought-tolerant microsymbiont of Phaseolus vulgaris (2015) (0)
Metabolic dependencies govern microbial syntrophies during methanogenesis in an anaerobic digestion ecosystem (2020) (0)
The Future of Microbial Genomics (2010) (0)
Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34 (2016) (0)
High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T (2016) (0)
Lawrence Berkeley National Laboratory Recent Work Title High-quality draft genome sequence of Gracilimonas tropica CL-CB 462 T ( DSM 19535 T ) , isolated from a Synechococcus culture Permalink (2015) (0)
High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2T (DSM 21788T), a valuable source of polysaccharide decomposing enzymes (2015) (0)
The genome sequence of the pathogen Brucella melitensis (2016) (0)
Faunimonas pinastri gen. nov., sp. nov., an endophyte from a pine tree of the family Pleomorphomonadaceae, class Alphaproteobacteria. (2022) (0)
High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy (2015) (0)
Characterisation of multiple heavy metal resistance loci in the genome of the novel species Cupriavidus neocaledonicus STM 6070, a nickel- and zinc-tolerant Mimosa pudica microsymbiont isolated from mining site soil (2019) (0)
High quality draft genome sequence of Leucobacter chironomi strain MM2LBT (DSM 19883T) isolated from a Chironomus sp. egg mass (2015) (0)
Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes (2017) (0)
Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters (2023) (0)
Using IMG: Comparative Analysis with the Integrated MicrobialGenomes System (2007) (0)
Genome sequence and description of the anaerobic lignin-degrading bacterium Tolumonas lignolytica sp. nov. (2015) (0)
High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512 (2015) (0)
High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York (2015) (0)
High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460 (2017) (0)
Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials (2019) (0)
Lawrence Berkeley National Laboratory Recent Work Title High-quality permanent draft genome sequence of Ensifer medicae strain WSM 244 , a microsymbiont isolated from Medicago polymorpha growing in alkaline soil Permalink (2015) (0)
Complete genome sequence of Syntrophobotulus glycolicus type strain (FlGlyR T ) (2011) (0)

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