Niles Pierce | Academic Influence

Niles Pierce's AcademicInfluence.com Rankings

Niles Pierce

Engineering

#5214

World Rank

#6459

Historical Rank

#1183

USA Rank

Bioengineering

#104

World Rank

#106

Historical Rank

#22

USA Rank

engineering Degrees

Niles Pierce

Mathematics

#5311

World Rank

#7485

Historical Rank

#1761

USA Rank

Measure Theory

#3069

World Rank

#3641

Historical Rank

#891

USA Rank

mathematics Degrees

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Engineering
Mathematics

Niles Pierce's Degrees

PhD Bioengineering University of California, Berkeley
Bachelors Bioengineering University of California, Berkeley
Bachelors Mathematics University of California, Berkeley

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Why Is Niles Pierce Influential?

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According to Wikipedia, Niles A. Pierce is an American mathematician, bioengineer, and professor at the California Institute of Technology. He is a leading researcher in the fields of molecular programming and dynamic nucleic acid nanotechnology. His research is focused on kinetically controlled DNA and RNA self-assembly. Pierce is working on applications in bioimaging.

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Niles Pierce's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Triggered amplification by hybridization chain reaction. (2004) (1379)
Programming biomolecular self-assembly pathways (2008) (1198)
NUPACK: Analysis and design of nucleic acid systems (2011) (1183)
An Introduction to the Adjoint Approach to Design (2000) (983)
Optimum Aerodynamic Design Using the Navier–Stokes Equations (1998) (665)
A synthetic DNA walker for molecular transport. (2004) (646)
Programmable in situ amplification for multiplexed imaging of mRNA expression (2010) (526)
Third-generation in situ hybridization chain reaction: multiplexed, quantitative, sensitive, versatile, robust (2018) (522)
Next-Generation in Situ Hybridization Chain Reaction: Higher Gain, Lower Cost, Greater Durability (2014) (423)
A partition function algorithm for nucleic acid secondary structure including pseudoknots (2003) (362)
Adjoint Recovery of Superconvergent Functionals from PDE Approximations (2000) (339)
Thermodynamic Analysis of Interacting Nucleic Acid Strands (2007) (333)
Algorithm Developments for Discrete Adjoint Methods (2003) (330)
An autonomous polymerization motor powered by DNA hybridization (2007) (300)
Adjoint equations in CFD: duality, boundary conditions and solution behaviour (1997) (258)
Protein design is NP-hard. (2002) (253)
NUPACK: a web-based tool for the analysis and design of nucleic acid systems (2007) (239)
Paradigms for computational nucleic acid design. (2004) (191)
An algorithm for computing nucleic acid base‐pairing probabilities including pseudoknots (2004) (182)
Nucleic acid sequence design via efficient ensemble defect optimization (2011) (171)
Single-molecule RNA detection at depth by hybridization chain reaction and tissue hydrogel embedding and clearing (2016) (164)
Adjoint and defect error bounding and correction for functional estimates (2003) (151)
Analytic adjoint solutions for the quasi-one-dimensional Euler equations (2001) (145)
Mapping a multiplexed zoo of mRNA expression (2016) (139)
Optimum aerodynamic design using the Navier-Stokes equations (1997) (139)
Exact rotamer optimization for protein design (2003) (138)
Preconditioned Multigrid Methods for Compressible Flow Calculations on Stretched Meshes (1997) (126)
Conformational splitting: A more powerful criterion for dead‐end elimination (2000) (119)
Adjoint Error Correction for Integral Outputs (2003) (94)
Improved- lift and drag estimates using adjoint Euler equations (1999) (93)
Selective cell death mediated by small conditional RNAs (2010) (92)
Topological constraints in nucleic acid hybridization kinetics (2005) (81)
Conformational splitting: A more powerful criterion for dead-end elimination (2000) (78)
Developmental Self-Assembly of a DNA Tetrahedron (2014) (76)
Constrained Multistate Sequence Design for Nucleic Acid Reaction Pathway Engineering. (2017) (71)
Conditional Guide RNAs: Programmable Conditional Regulation of CRISPR/Cas Function in Bacterial and Mammalian Cells via Dynamic RNA Nanotechnology (2019) (62)
Multiplexed miRNA northern blots via hybridization chain reaction (2016) (62)
Progress in adjoint error correction for integral functionals (2004) (54)
Accelerating three-dimensional navier-stokes calculations (1997) (48)
Sequence Design for a Test Tube of Interacting Nucleic Acid Strands. (2015) (47)
Rewritable Memory by Controllable Nanopatterning of DNA (2004) (41)
Preconditioning compressible flow calculations on stretched meshes (1996) (40)
Multidimensional quantitative analysis of mRNA expression within intact vertebrate embryos (2017) (38)
Conditional Dicer Substrate Formation via Shape and Sequence Transduction with Small Conditional RNAs (2013) (35)
Localizing transcripts to single cells suggests an important role of uncultured deltaproteobacteria in the termite gut hydrogen economy (2013) (30)
Selective Nucleic Acid Capture with Shielded Covalent Probes (2013) (29)
A Unified Dynamic Programming Framework for the Analysis of Interacting Nucleic Acid Strands: Enhanced Models, Scalability, and Speed. (2020) (29)
Preconditioning on stretched meshes (1995) (28)
Efficient Computation of Unsteady Viscous Flows by an Implicit Preconditioned Multigrid Method (1998) (26)
Adjoint recovery of superconvergent functionals from approximate solutions of partial differential equations (1998) (25)
Exquisite Sequence Selectivity with Small Conditional RNAs (2014) (16)
Analytic Adjoint Solutions for the Quasi-1D Euler Equations (2000) (14)
Hybridization chain reaction enables a unified approach to multiplexed, quantitative, high-resolution immunohistochemistry and in situ hybridization (2021) (14)
Combinatorial analysis of mRNA expression patterns in mouse embryos using hybridization chain reaction. (2015) (14)
Superconvergent lift estimates through adjoint error analysis (2001) (13)
Signal Transduction in Human Cell Lysate via Dynamic RNA Nanotechnology (2018) (12)
Multiplexed in situ hybridization using hybridization chain reaction. (2014) (12)
A preconditioned implicit multigrid algorithm for parallel computation of unsteady aeroelastic compressible flows (1997) (11)
High-Performance Allosteric Conditional Guide RNAs for Mammalian Cell-Selective Regulation of CRISPR/Cas. (2021) (10)
Analysis of Adjoint Error Correction for Superconvergent Functional Estimates (2001) (7)
Multiplexed Quantitative In Situ Hybridization with Subcellular or Single-Molecule Resolution Within Whole-Mount Vertebrate Embryos: qHCR and dHCR Imaging (v3.0). (2020) (6)
DNA Computing, 11th International Workshop on DNA Computing, DNA11, London, ON, Canada, June 6-9, 2005. Revised Selected Papers (2006) (4)
Looking on the horizon; potential and unique approaches to developing radiation countermeasures for deep space travel. (2022) (4)
Rudiments of Polymer Physics (2002) (3)
Conditional Guide RNAs: Programmable Conditional Regulation of CRISPR/Cas Function in Bacteria via Dynamic RNA Nanotechnology (2019) (2)
Multiplexed Quantitative In Situ Hybridization for Mammalian Cells on a Slide: qHCR and dHCR Imaging (v3.0). (2020) (2)
Hybridization Chain Reaction Lateral Flow Assays for Amplified Instrument-Free At-Home SARS-CoV-2 Testing (2023) (1)
Sensitive and Selective Nucleic Acid Capture with Shielded Covalent Probes (2012) (0)
Reaction en chaine par hybridation (2005) (0)
A 97-32462 AIAA-97-1953 Accelerating Three-Dimensional Navier-Stokes Calculations (2001) (0)
Multiplexed Quantitative In Situ Hybridization for Mammalian or Bacterial Cells in Suspension: qHCR Flow Cytometry (v3.0). (2020) (0)
Table 2: Statistics on Coarsening of Tetrahedral Mesh in a Prism 4.5 Anisotropic Coarsening in Three Dimensions 4.3 Directional Anisotropic Coarsening in Two Dimensions 4 Mesh Coarsening Examples 4.1 Two-dimensional Multi-element Airfoil (2007) (0)
Proceedings of the 11th international conference on DNA Computing (2005) (0)
Semiflexible chain statistics with fixed end orientations (2005) (0)
Selective Oligonucleotide and MRNA Pull-Down with Shielded Covalent Probes (2013) (0)
Nanoscale Molecular Transport by Synthetic DNA Machines (2006) (0)
Activation de la pkr par reaction en chaine d'hybridation (2006) (0)
Retraction for Venkataraman et al., Selective cell death mediated by small conditional RNAs (2012) (0)
Supplementary Information Programming Biomolecular Self-Assembly Pathways (2007) (0)
HCR Lateral Flow Assays for Amplified Instrument-Free At-Home SARS-CoV-2 Testing (2022) (0)
Elucidation and Control of the Hybridization Chain Reaction (2011) (0)

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What Schools Are Affiliated With Niles Pierce?

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