Patricia L. Clark
#172,957
Most Influential Person Now
American biophysicist
Patricia L. Clark's AcademicInfluence.com Rankings
Patricia L. Clarkphysics Degrees
Physics
#8893
World Rank
#11211
Historical Rank
Biophysics
#412
World Rank
#424
Historical Rank
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Physics
Patricia L. Clark's Degrees
- PhD Biophysics Stanford University
- Masters Physics Stanford University
- Bachelors Physics Stanford University
Why Is Patricia L. Clark Influential?
(Suggest an Edit or Addition)According to Wikipedia, Patricia Louise Clark is an American biophysicist. She is the Rev. John Cardinal O’Hara, C.S.C., Professor of Chemistry and Biochemistry, associate vice president for research, and director of the Biophysics Instrumentation Core Facility at the University of Notre Dame.
Patricia L. Clark's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Roles for Synonymous Codon Usage in Protein Biogenesis. (2015) (231)
- Pertactin beta-helix folding mechanism suggests common themes for the secretion and folding of autotransporter proteins. (2006) (208)
- Rare Codons Cluster (2008) (181)
- Protein folding in the cell: reshaping the folding funnel. (2004) (167)
- Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water (2017) (142)
- Vectorial transport and folding of an autotransporter virulence protein during outer membrane secretion (2009) (132)
- Expanding Anfinsen’s Principle: Contributions of Synonymous Codon Selection to Rational Protein Design (2014) (115)
- Cotranslational folding promotes beta-helix formation and avoids aggregation in vivo. (2008) (103)
- Folding the proteome. (2013) (101)
- Synonymous codon substitutions perturb cotranslational protein folding in vivo and impair cell fitness (2020) (99)
- Widespread position-specific conservation of synonymous rare codons within coding sequences (2017) (82)
- Intrinsic tryptophans of CRABPI as probes of structure and folding (1996) (79)
- Distinct cysteine sulfhydryl environments detected by analysis of Raman S-hh markers of Cys-->Ser mutant proteins. (2001) (74)
- A Newly Synthesized, Ribosome-bound Polypeptide Chain Adopts Conformations Dissimilar from Early in VitroRefolding Intermediates* (2001) (74)
- Homogeneous stalled ribosome nascent chain complexes produced in vivo or in vitro (2005) (73)
- Cotranslational folding increases GFP folding yield. (2010) (70)
- Quality over quantity: optimizing co-translational protein folding with non-'optimal' synonymous codons. (2016) (63)
- A conserved stable core structure in the passenger domain beta-helix of autotransporter virulence proteins. (2008) (62)
- Cavity formation before stable hydrogen bonding in the folding of a β-clam protein (1997) (54)
- Increased incidence of rare codon clusters at 5' and 3' gene termini:implications for function (2010) (54)
- Probing the folding pathway of a beta-clam protein with single-tryptophan constructs. (1998) (52)
- ATP-independent control of autotransporter virulence protein transport via the folding properties of the secreted protein. (2012) (44)
- Dynamics and Energy Contributions for Transport of Unfolded Pertactin through a Protein Nanopore. (2015) (41)
- Conformations of co-translational folding intermediates. (2005) (41)
- Structure-based prediction reveals capping motifs that inhibit β-helix aggregation (2011) (41)
- %MinMax: A versatile tool for calculating and comparing synonymous codon usage and its impact on protein folding (2018) (40)
- Of linkers and autochaperones: an unambiguous nomenclature to identify common and uncommon themes for autotransporter secretion (2015) (31)
- Commonly used FRET fluorophores promote collapse of an otherwise disordered protein (2019) (30)
- Response to Comment on “Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water” (2018) (29)
- Extracellular protease digestion to evaluate membrane protein cell surface localization (2015) (29)
- Properties of protein unfolded states suggest broad selection for expanded conformational ensembles (2020) (28)
- The comparison of aggregation and folding of enhanced green fluorescent protein (EGFP) by spectroscopic studies (2010) (27)
- Folding and unfolding of a non-fluorescent mutant of green fluorescent protein (2007) (25)
- GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison (2017) (25)
- Multiple Driving Forces Required for Efficient Secretion of Autotransporter Virulence Proteins* (2015) (24)
- Autotransporters: The Cellular Environment Reshapes a Folding Mechanism to Promote Protein Transport. (2012) (23)
- Characterization of the protrimer intermediate in the folding pathway of the interdigitated beta-helix tailspike protein. (2002) (22)
- An alternative outer membrane secretion mechanism for an autotransporter protein lacking a C‐terminal stable core (2013) (21)
- Slow formation of aggregation‐resistant β‐sheet folding intermediates (2010) (21)
- Water as a good solvent for unfolded proteins: Folding and collapse are fundamentally different. (2020) (15)
- DegP Chaperone Suppresses Toxic Inner Membrane Translocation Intermediates (2016) (14)
- Monoclonal Antibody Epitope Mapping Describes Tailspike β-Helix Folding and Aggregation Intermediates* (2005) (11)
- Commonly-used FRET fluorophores promote collapse of an otherwise disordered protein (2018) (11)
- Measuring cotranslational folding of nascent polypeptide chains on ribosomes. (2009) (10)
- Network analysis of synonymous codon usage (2019) (8)
- Competing stress-dependent oligomerization pathways regulate self-assembly of the periplasmic protease-chaperone DegP (2021) (7)
- Molecular chaperones: providing a safe place to weather a midlife protein-folding crisis (2016) (7)
- Non–fluorescent mutant of green fluorescent protein sheds light on the mechanism of chromophore formation (2018) (6)
- Disulfide bond-mediated passenger domain stalling as a structural probe of autotransporter outer membrane secretion in vivo. (2011) (6)
- Analysis of computational codon usage models and their association with translationally slow codons (2020) (5)
- Author Correction: GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison (2017) (5)
- CHARMING: Harmonizing synonymous codon usage to replicate a desired codon usage pattern. (2021) (4)
- How to Build a Complex, Functional Propeller Protein, From Parts. (2016) (4)
- Proteins in the cell (2019) (3)
- Adding protease digestion to the membrane protein toolbox. (2011) (2)
- Outer Membrane Secretion Efficiency of Autotransporter Virulence Proteins Correlates with Passenger Domain Folding Properties (2011) (2)
- Synonymous codon substitutions perturb co-translational protein folding in vivo and impair cell fitness (2019) (1)
- Spectroscopic properties of two single-cysteine mutants of EGFP: C48S-EGFP and C70S-EGFP (2014) (1)
- Multi‐layer sequential network analysis improves protein 3D structural classification (2022) (1)
- Dynamics and Energy Contributions for Transport of Pertactin through an Aerolysin Nanopore (2015) (1)
- Saxs Confirms that FRET Dyes Promote Collapse of an Otherwise Fully Disordered Protein (2018) (1)
- Protein Folding in the Cell, from Atom to Organism (2014) (1)
- A New Look at Codon Usage and Protein Expression. (2019) (1)
- Synonymous codon substitutions regulate transcription and translation of an upstream gene (2022) (1)
- Climbing to the peak of nascent-chain knowledge (2016) (0)
- Folding of a predominantly β-sheet protein with a central cavity (2002) (0)
- Driving Forces for Protein Secretion Across the Bacterial Outer Membrane (2014) (0)
- Characterizing Disordered Protein Ensembles Using Small‐angle Scattering (2018) (0)
- The conformation of the protrimeric intermediate of P22 tailspike (2000) (0)
- The importance of measuring the solvent quality of unfolded proteins (2019) (0)
- Testing mechanisms for homomeric protein assembly in vivo. (2023) (0)
- Network approach integrates 3D structural and sequence data to improve protein classification (2016) (0)
- Rare Codon Clustering: Implications for Protein Biogenesis (2009) (0)
- Investigating the sequence properties that govern disorder and secretion of bacterial virulence proteins. (2023) (0)
- Network approach integrates 3D structural and sequence data to improve protein structural comparison (2016) (0)
- Driving forces of autotransporter secretion 1 Multiple driving forces required for ef fi cient secretion of autotransporter virulence proteins (2015) (0)
- Acknowledgment to reviewers (2018) (0)
- HarMinMax: Harmonizing Codon Usage to Replicate Local Host Translation (2018) (0)
- Multiple Driving Forces Contribute to Translocation of Autotransporter Virulence Proteins (2015) (0)
- Can An Autotransporter Protein Truly Transport Itself Across A Lipid Bilayer (2009) (0)
- Expanding Anfinsen’s Principle: Controlling Protein Structure by Altering Local Translation Rate (2012) (0)
- The ClpX translocase and its application to the study of vectorial protein folding in vitro (2022) (0)
- Folding Proteins From One End to the Other (2018) (0)
- Characterizing the sequence determinants of protein disorder and its impact on virulence protein secretion (2022) (0)
- J ul 2 01 9 Network analysis of synonymous codon usage (2019) (0)
- Measuring the (Good) Solvent Quality of Water for Disordered Proteins from a Single SAXS Measurement (2017) (0)
- Recapitulating protein vectorial appearance enhances folding to the native structure in vitro. (2023) (0)
- Integrated In Vivo and In Silico Studies of Cotranslational Protein Folding as a Function of Translation Rate (2017) (0)
- Direct Observation of the Contraction of an Unfolded Protein with Temperature (2021) (0)
- Dynamic network analysis improves protein 3D structural classification (2021) (0)
- Measuring the solvent quality of water for disordered proteins from a single SAXS measurement (2018) (0)
- New Directions for Vectorial Protein Folding (2013) (0)
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