Peter Simmonds

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Peter Simmonds is affiliated with the following schools: Institute of Cancer Research, Imperial College London, University of Oxford, University of Edinburgh

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Peter Simmonds

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Philosophy

Peter Simmonds's Degrees

PhD Biochemistry University of Oxford

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Peter Simmonds's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Consensus proposals for a unified system of nomenclature of hepatitis C virus genotypes (2005) (1570)
Classification of hepatitis C virus into six major genotypes and a series of subtypes by phylogenetic analysis of the NS-5 region. (1993) (1447)
Expanded Classification of Hepatitis C Virus Into 7 Genotypes and 67 Subtypes: Updated Criteria and Genotype Assignment Web Resource (2013) (1249)
A proposed system for the nomenclature of hepatitis C viral genotypes (1994) (1100)
Genetic diversity and evolution of hepatitis C virus--15 years on. (2004) (923)
Broad and strong memory CD4+ and CD8+ T cells induced by SARS-CoV-2 in UK convalescent individuals following COVID-19 (2020) (884)
Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2015) (2009) (725)
Prevalence of Kaposi's sarcoma associated herpesvirus infection measured by antibodies to recombinant capsid protein and latent immunofluorescence antigen (1996) (653)
Hepatitis C virus genotypes: An investigation of type‐specific differences in geographic origin and disease (1994) (626)
Human immunodeficiency virus-infected individuals contain provirus in small numbers of peripheral mononuclear cells and at low copy numbers (1990) (617)
Variability of hepatitis C virus (1995) (595)
Epidemiology and Clinical Presentations of the Four Human Coronaviruses 229E, HKU1, NL63, and OC43 Detected over 3 Years Using a Novel Multiplex Real-Time PCR Method (2010) (570)
Classification, nomenclature, and database development for hepatitis C virus (HCV) and related viruses: proposals for standardization (1998) (538)
Consensus proposals for classification of the family Hepeviridae (2014) (517)
Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018) (2017) (502)
Selection for specific sequences in the external envelope protein of human immunodeficiency virus type 1 upon primary infection (1993) (494)
Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2017) (2017) (489)
Consensus statement: Virus taxonomy in the age of metagenomics (2017) (481)
Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2016) (2016) (472)
ICTV Virus Taxonomy Profile: Flaviviridae (2017) (470)
Survey of major genotypes and subtypes of hepatitis C virus using RFLP of sequences amplified from the 5' non-coding region. (1995) (455)
Sequence variability in the 5' non-coding region of hepatitis C virus: identification of a new virus type and restrictions on sequence diversity. (1993) (449)
Analysis of a new hepatitis C virus type and its phylogenetic relationship to existing variants. (1992) (446)
New DNA Viruses Identified in Patients with Acute Viral Infection Syndrome (2005) (374)
Detection of a novel DNA virus (TT virus) in blood donors and blood products (1998) (366)
MAIT cells are activated during human viral infections (2016) (366)
Proposed reference sequences for hepatitis E virus subtypes. (2016) (338)
Extrahepatic Immunologic Manifestations in Chronic Hepatitis C and Hepatitis C Virus Serotypes (1995) (335)
Human Bocaviruses Are Highly Diverse, Dispersed, Recombination Prone, and Prevalent in Enteric Infections (2010) (335)
Detection of three types of hepatitis C virus in blood donors: investigation of type‐specific differences in serologic reactivity and rate of alanine aminotransferase abnormalities (1993) (324)
Analysis of sequence diversity in hypervariable regions of the external glycoprotein of human immunodeficiency virus type 1 (1990) (320)
A newly identified bocavirus species in human stool. (2009) (307)
Detection of Zoonotic Pathogens and Characterization of Novel Viruses Carried by Commensal Rattus norvegicus in New York City (2014) (305)
The origin of hepatitis C virus genotypes. (1997) (303)
The Fecal Virome of Pigs on a High-Density Farm (2011) (299)
Identification of genotypes of hepatitis C virus by sequence comparisons in the core, E1 and NS-5 regions. (1994) (297)
Early and nonreversible decrease of CD161++ /MAIT cells in HIV infection. (2013) (295)
ICTV Virus Taxonomy Profile: Picornaviridae (2017) (292)
The GB viruses: a review and proposed classification of GBV-A, GBV-C (HGV), and GBV-D in genus Pegivirus within the family Flaviviridae (2011) (287)
Investigation of the pattern of hepatitis C virus sequence diversity in different geographical regions: implications for virus classification. The International HCV Collaborative Study Group. (1995) (279)
Characterization of a canine homolog of hepatitis C virus (2011) (276)
Mapping of serotype-specific, immunodominant epitopes in the NS-4 region of hepatitis C virus (HCV): use of type-specific peptides to serologically differentiate infections with HCV types 1, 2, and 3 (1993) (268)
SSE: a nucleotide and amino acid sequence analysis platform (2012) (257)
Frequency and Dynamics of Recombination within Different Species of Human Enteroviruses (2006) (250)
Epidemiological Profile and Clinical Associations of Human Bocavirus and Other Human Parvoviruses (2006) (250)
High Variety of Known and New RNA and DNA Viruses of Diverse Origins in Untreated Sewage (2012) (249)
Influence of HAART on HIV-related CNS disease and neuroinflammation. (2005) (248)
Infection with hepatitis G virus among recipients of plasma products (1996) (244)
Convergent and divergent sequence evolution in the surface envelope glycoprotein of human immunodeficiency virus type 1 within a single infected patient. (1992) (244)
Viral heterogeneity of the hepatitis C virus. (1999) (242)
Variation of the hepatitis C virus 5' non-coding region: implications for secondary structure, virus detection and typing. The International HCV Collaborative Study Group. (1995) (239)
The origin and evolution of hepatitis viruses in humans. (2001) (238)
Proposed revision to the taxonomy of the genus Pestivirus, family Flaviviridae (2017) (238)
Taxonomy of the order Mononegavirales: update 2019 (2019) (237)
Identification of Rodent Homologs of Hepatitis C Virus and Pegiviruses (2013) (236)
Recombination in the Genesis and Evolution of Hepatitis B Virus Genotypes (2005) (234)
Changes to virus taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2019) (2019) (231)
Taxonomy of the order Bunyavirales: update 2019 (2019) (224)
Hepatitis C quantification and sequencing in blood products, haemophiliacs, and drug users (1990) (223)
Serology-Enabled Discovery of Genetically Diverse Hepaciviruses in a New Host (2012) (223)
Proposals for the classification of human rhinovirus species C into genotypically assigned types. (2010) (223)
Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence. (2004) (221)
SARS-CoV-2 within-host diversity and transmission (2021) (219)
HLA HAPLOTYPE A1 B8 DR3 AS A RISK FACTOR FOR HIV-RELATED DISEASE (1988) (217)
Concurrent evolution of human immunodeficiency virus type 1 in patients infected from the same source: rate of sequence change and low frequency of inactivating mutations (1990) (217)
Complete nucleotide sequence of a type 4 hepatitis C virus variant, the predominant genotype in the Middle East. (1997) (217)
Virus 'quasispecies': making a mountain out of a molehill? (1997) (217)
Norovirus Regulation of the Innate Immune Response and Apoptosis Occurs via the Product of the Alternative Open Reading Frame 4 (2011) (214)
Discontinuous sequence change of human immunodeficiency virus (HIV) type 1 env sequences in plasma viral and lymphocyte-associated proviral populations in vivo: implications for models of HIV pathogenesis (1991) (214)
Detection of a novel DNA virus (TTV) in blood donors and blood products. (1998) (210)
Distribution of Hepatitis C Virus Genotypes Determined by Line Probe Assay in Patients with Chronic Hepatitis C Seen at Tertiary Referral Centers in the United States (1996) (207)
Fundamental principles of epidemic spread highlight the immediate need for large-scale serological surveys to assess the stage of the SARS-CoV-2 epidemic (2020) (202)
A highly prevalent and genetically diversified Picornaviridae genus in South Asian children (2008) (197)
Identification of Shared Populations of Human Immunodeficiency Virus Type 1 Infecting Microglia and Tissue Macrophages outside the Central Nervous System (2001) (195)
Human parechoviruses: biology, epidemiology and clinical significance. (2009) (194)
Epidemiology and Clinical Associations of Human Parechovirus Respiratory Infections (2008) (194)
HIV encephalitis, proviral load and dementia in drug users and homosexuals with AIDS. Effect of neocortical involvement. (1998) (193)
Recombination and Selection in the Evolution of Picornaviruses and Other Mammalian Positive-Stranded RNA Viruses (2006) (188)
The origin of hepatitis C virus. (2013) (184)
Severity of liver disease in liver transplantation recipients with hepatitis C virus infection: Relationship to genotype and level of viremia (1996) (179)
Comparison of plasma virus loads among individuals infected with hepatitis C virus (HCV) genotypes 1, 2, and 3 by quantiplex HCV RNA assay versions 1 and 2, Roche Monitor assay, and an in-house limiting dilution method (1997) (178)
Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types (2013) (178)
Rampant C→U Hypermutation in the Genomes of SARS-CoV-2 and Other Coronaviruses: Causes and Consequences for Their Short- and Long-Term Evolutionary Trajectories (2020) (173)
Comparison of Tissue Distribution, Persistence, and Molecular Epidemiology of Parvovirus B19 and Novel Human Parvoviruses PARV4 and Human Bocavirus (2007) (171)
The hepatitis C virus epidemic among injecting drug users. (2005) (171)
Evolutionary analysis of variants of hepatitis C virus found in South-East Asia: comparison with classifications based upon sequence similarity. (1996) (166)
Structural Constraints on RNA Virus Evolution (1999) (165)
Changes to virus taxonomy and the Statutes ratified by the International Committee on Taxonomy of Viruses (2020) (2020) (164)
Detection of parvovirus B19 in donated blood: a model system for screening by polymerase chain reaction (1993) (163)
Spread of hepatitis C virus among European injection drug users infected with HIV: a phylogenetic analysis. (2004) (158)
Human immunodeficiency virus and the brain: investigation of virus load and neuropathologic changes in pre-AIDS subjects. (1993) (158)
Specific association of human parechovirus type 3 with sepsis and fever in young infants, as identified by direct typing of cerebrospinal fluid samples. (2009) (156)
The influence of CpG and UpA dinucleotide frequencies on RNA virus replication and characterization of the innate cellular pathways underlying virus attenuation and enhanced replication (2014) (156)
The new scope of virus taxonomy: partitioning the virosphere into 15 hierarchical ranks (2020) (155)
Infrequent vertical transmission of hepatitis C virus. (1993) (153)
Update: proposed reference sequences for subtypes of hepatitis E virus (species Orthohepevirus A) (2020) (151)
Thermodynamic and phylogenetic prediction of RNA secondary structures in the coding region of hepatitis C virus. (2002) (150)
Nomenclature and numbering of the hepatitis C virus. (2009) (149)
Accelerated Tau deposition in the brains of individuals infected with human immunodeficiency virus-1 before and after the advent of highly active anti-retroviral therapy (2006) (146)
Frequent infection of peripheral blood CD8-positive T-lymphocytes with HIV-1 (1996) (145)
RNA virus attenuation by codon pair deoptimisation is an artefact of increases in CpG/UpA dinucleotide frequencies (2014) (144)
Frequent reinfection and reactivation of hepatitis C virus genotypes in multitransfused hemophiliacs. (1994) (142)
Molecular epidemiology of an outbreak of infection with hepatitis C virus in recipients of anti-D immunoglobulin (1995) (142)
HIV-1 tropism and co-receptor use (1997) (141)
Genetic Variability and the Classification of Hepatitis E Virus (2013) (141)
Recommendations for enterovirus diagnostics and characterisation within and beyond Europe. (2018) (140)
Proposed update to the taxonomy of the genera Hepacivirus and Pegivirus within the Flaviviridae family (2016) (140)
Changes to virus taxonomy and to the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2021) (2021) (140)
Hepatitis C serotype and response to interferon therapy. (1994) (140)
Screening Respiratory Samples for Detection of Human Rhinoviruses (HRVs) and Enteroviruses: Comprehensive VP4-VP2 Typing Reveals High Incidence and Genetic Diversity of HRV Species C (2009) (139)
No evidence for an association between infections with WU and KI polyomaviruses and respiratory disease (2007) (138)
A Highly Divergent Picornavirus in a Marine Mammal (2007) (133)
Detailed mapping of RNA secondary structures in core and NS5B-encoding region sequences of hepatitis C virus by RNase cleavage and novel bioinformatic prediction methods. (2004) (130)
Global distribution of transfusion-transmitted virus. (1998) (129)
Low level or absent in vivo replication of hepatitis C virus and hepatitis G virus/GB virus C in peripheral blood mononuclear cells. (1998) (129)
Bioinformatic and functional analysis of RNA secondary structure elements among different genera of human and animal caliciviruses (2008) (128)
Survey of type 6 group variants of hepatitis C virus in Southeast Asia by using a core-based genotyping assay (1996) (127)
2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales (2020) (122)
Characteristics of Nucleotide Substitution in the Hepatitis C Virus Genome: Constraints on Sequence Change in Coding Regions at Both Ends of the Genome (1997) (121)
Broad and strong memory CD4+ and CD8+ T cells induced by SARS-CoV-2 in UK convalescent COVID-19 patients (2020) (120)
Non-Macrophage-Tropic Human Immunodeficiency Virus Type 1 R5 Envelopes Predominate in Blood, Lymph Nodes, and Semen: Implications for Transmission and Pathogenesis (2006) (120)
Parechoviruses in children: understanding a new infection (2010) (119)
Long-Term Evolution of the Hypervariable Region of Hepatitis C Virus in a Common-Source-Infected Cohort (1998) (116)
Reactivation and mutation of newly discovered WU, KI, and Merkel cell carcinoma polyomaviruses in immunosuppressed individuals. (2009) (116)
A comprehensive system for consistent numbering of HCV sequences, proteins and epitopes (2006) (115)
Antiviral RNA Interference Responses Induced by Semliki Forest Virus Infection of Mosquito Cells: Characterization, Origin, and Frequency-Dependent Functions of Virus-Derived Small Interfering RNAs (2010) (115)
Bioinformatic and Physical Characterizations of Genome-Scale Ordered RNA Structure in Mammalian RNA Viruses (2008) (111)
A Hepatitis C Virus cis-Acting Replication Element Forms a Long-Range RNA-RNA Interaction with Upstream RNA Sequences in NS5B (2008) (111)
Detection of Hepatitis B Virus Infection in Wild-Born Chimpanzees (Pan troglodytes verus): Phylogenetic Relationships with Human and Other Primate Genotypes (2000) (111)
A comparative method for finding and folding RNA secondary structures within protein-coding regions. (2004) (111)
Discrimination of hepatitis G virus/GBV-C geographical variants by analysis of the 5' non-coding region. (1997) (109)
The Association of Recombination Events in the Founding and Emergence of Subgenogroup Evolutionary Lineages of Human Enterovirus 71 (2011) (108)
Direct identification of human enterovirus serotypes in cerebrospinal fluid by amplification and sequencing of the VP1 region. (2009) (107)
Early acquisition of TT virus (TTV) in an area endemic for TTV infection. (1999) (106)
Transmission Networks and Population Turnover of Echovirus 30 (2008) (105)
Investigation of the dynamics of the spread of human immunodeficiency virus to brain and other tissues by evolutionary analysis of sequences from the p17gag and env genes (1997) (105)
Nonprimate Hepaciviruses in Domestic Horses, United Kingdom (2012) (104)
Taxonomy of the order Bunyavirales: second update 2018 (2019) (104)
Absence of hepatitis C virus transmission but frequent transmission of HIV-1 from sexual contact with doubly-infected individuals. (1997) (103)
Comparison of human parechovirus and enterovirus detection frequencies in cerebrospinal fluid samples collected over a 5‐year period in edinburgh: HPeV type 3 identified as the most common picornavirus type (2011) (102)
Consensus proposals for classification of the family Hepeviridae. (2015) (102)
Genome-to-genome analysis highlights the impact of the human innate and adaptive immune systems on the hepatitis C virus (2017) (102)
Use of several second generation serological assays to determine the true prevalence of hepatitis C virus infection in haemophiliacs treated with non‐virus inactivated factor VIII and IX concentrates (1992) (100)
Redistribution of HIV outside the lymphoid system with onset of AIDS (1994) (100)
Implications of variations of "conserved" regions of hepatitis C virus genome (1995) (99)
In vivo distribution and cytopathology of variants of human immunodeficiency virus type 1 showing restricted sequence variability in the V3 loop (1994) (98)
Serological responses to infection with three different types of hepatitis C virus (1991) (97)
Additional changes to taxonomy ratified in a special vote by the International Committee on Taxonomy of Viruses (October 2018) (2019) (97)
Allelic Variation of HERV-K(HML-2) Endogenous Retroviral Elements in Human Populations (2004) (96)
Comparison of Next-Generation Sequencing Technologies for Comprehensive Assessment of Full-Length Hepatitis C Viral Genomes (2016) (96)
Influence of risk group and zidovudine therapy on the development of HIV encephalitis and cognitive impairment in AIDS patients (1996) (96)
Variation in HIV-1 R5 macrophage-tropism correlates with sensitivity to reagents that block envelope: CD4 interactions but not with sensitivity to other entry inhibitors (2008) (95)
Evolutionary Dynamics and Temporal/Geographical Correlates of Recombination in the Human Enterovirus Echovirus Types 9, 11, and 30 (2010) (95)
Molecular investigation of human immunodeficiency virus (HIV) infection in a patient of an HIV-infected surgeon. (1993) (94)
Clinical significance of intrahepatic hepatitis C virus levels in patients with chronic HCV infection (1998) (94)
The complete coding sequence of hepatitis C virus genotype 5a, the predominant genotype in South Africa. (1997) (94)
Hepatitis C virus (HCV) genotypes and chronic liver disease in Pakistan (1997) (93)
Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018) (2018) (93)
Virome Analysis of Transfusion Recipients Reveals a Novel Human Virus That Shares Genomic Features with Hepaciviruses and Pegiviruses (2015) (92)
Detection, quantification and sequencing of HIV-1 from the plasma of seropositive individuals and from factor VIII concentrates. (1991) (91)
Prisoners of war — host adaptation and its constraints on virus evolution (2018) (90)
Heterogeneity of hepatitis C virus genotypes in hemophilia: relationship with chronic liver disease. (1995) (90)
Mosaic Structure of the Human Immunodeficiency Virus Type 1 Genome Infecting Lymphoid Cells and the Brain: Evidence for Frequent In Vivo Recombination Events in the Evolution of Regional Populations (1999) (90)
Serological determination of hepatitis C virus genotype: comparison with a standardized genotyping assay (1997) (90)
Analysis of Genetic Diversity and Sites of Recombination in Human Rhinovirus Species C (2010) (89)
Epidemiological, clinical and therapeutic associations of hepatitis C types in western European patients. (1996) (88)
First coitus before menarche and risk of sexually transmitted disease (1990) (87)
The molecular epidemiology of human immunodeficiency virus type 1 in Edinburgh. (1995) (87)
Widespread Infection with Homologues of Human Parvoviruses B19, PARV4, and Human Bocavirus of Chimpanzees and Gorillas in the Wild (2010) (83)
The distribution of hepatitis C virus genotypes in Turkish patients (1995) (83)
Viraemic frequencies and seroprevalence of non-primate hepacivirus and equine pegiviruses in horses and other mammalian species. (2014) (81)
Identification of a Pegivirus (GB Virus-Like Virus) That Infects Horses (2013) (81)
A genetic analysis of hepatitis C virus transmission between injection drug users. (2002) (81)
Comprehensive full-length sequence analyses of human parechoviruses: diversity and recombination. (2010) (81)
Reconstructing the origins of human hepatitis viruses. (2001) (81)
Characterization of a Canine Homolog of Human Aichivirus (2011) (80)
Determinants of HIV disease progression: six-year longitudinal study in the Edinburgh haemophilia/HIV cohort (1991) (80)
The effects of illicit drugs on the HIV infected brain. (2008) (80)
Genotype differences in susceptibility and resistance development of hepatitis C virus to protease inhibitors telaprevir (VX‐950) and danoprevir (ITMN‐191) (2011) (79)
Comparison of diagnostic clinical samples and environmental sampling for enterovirus and parechovirus surveillance in Scotland, 2010 to 2012. (2014) (79)
Hepatitis C virus: epidemiology and genotypes in the north east of England. (1996) (79)
Atypical hand, foot, and mouth disease associated with coxsackievirus A6 infection, Edinburgh, United Kingdom, January to February 2014. (2014) (78)
Disease burden of the most commonly detected respiratory viruses in hospitalized patients calculated using the disability adjusted life year (DALY) model (2011) (78)
HTLV-III ANTIBODY IN EDINBURGH DRUG ADDICTS (1985) (78)
Response to interferon‐α of Egyptian patients infected with hepatitis C virus genotype 4 (1996) (78)
Elevation of CpG frequencies in influenza A genome attenuates pathogenicity but enhances host response to infection (2016) (77)
Surveying the global virome: identification and characterization of HCV-related animal hepaciviruses. (2015) (77)
Sexual transmission of GB virus C/hepatitis G virus (1998) (77)
Using radiant cooled floors to condition large spaces and maintain comfort conditions (2000) (77)
Convalescent plasma therapy for the treatment of patients with COVID‐19: Assessment of methods available for antibody detection and their correlation with neutralising antibody levels (2020) (76)
Genotype Dependence of Hepatitis C Virus Load Measurement in Commercially Available Quantitative Assays (1999) (76)
When Should “I” Consider a New Hepatitis B Virus Genotype? (2008) (76)
TT virus--part of the normal human flora? (1999) (76)
Phylogenetic analysis of GBV-C/hepatitis G virus. (2000) (76)
High frequencies of exposure to the novel human parvovirus PARV4 in hemophiliacs and injection drug users, as detected by a serological assay for PARV4 antibodies. (2009) (76)
Evaluating the evidence for virus/host co-evolution. (2011) (75)
Use of Nucleotide Composition Analysis To Infer Hosts for Three Novel Picorna-Like Viruses (2010) (74)
Geographic and species association of hepatitis B virus genotypes in non-human primates. (2003) (74)
Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages (2019) (73)
Genetics, Recombination and Clinical Features of Human Rhinovirus Species C (HRV-C) Infections; Interactions of HRV-C with Other Respiratory Viruses (2009) (73)
Human Parvovirus 4 as Potential Cause of Encephalitis in Children, India (2011) (72)
Resistance of porcine circovirus and chicken anemia virus to virus inactivation procedures used for blood products (2006) (72)
Outbreak of acute hepatitis C following the use of anti-hepatitis C virus--screened intravenous immunoglobulin therapy. (1996) (72)
Rapid Sequence Change and Geographical Spread of Human Parvovirus B19: Comparison of B19 Virus Evolution in Acute and Persistent Infections (2008) (71)
Interferon lambda 4 impacts the genetic diversity of hepatitis C virus (2019) (71)
Interferon lambda 4 impacts the genetic diversity of hepatitis C virus (2019) (71)
Phylogeography and epidemic history of hepatitis C virus genotype 4 in Africa (2014) (71)
Parenteral Transmission of the Novel Human Parvovirus PARV4 (2007) (70)
50 years of the International Committee on Taxonomy of Viruses: progress and prospects (2017) (70)
A twist in the tail: SHAPE mapping of long-range interactions and structural rearrangements of RNA elements involved in HCV replication (2012) (70)
Virus taxonomy in the age of metagenomics (2017) (70)
Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy (2018) (69)
Discovery and Characterization of Mammalian Endogenous Parvoviruses (2010) (69)
A third genotype of the human parvovirus PARV4 in sub-Saharan Africa. (2008) (69)
Recombination dynamics of human parechoviruses: investigation of type-specific differences in frequency and epidemiological correlates. (2010) (69)
HIV and Drug Misuse in the Edinburgh Cohort (2002) (68)
Corrigendum: Exploration of acetanilide derivatives of 1-(ω-phenoxyalkyl)uracils as novel inhibitors of Hepatitis C Virus replication (2016) (68)
Variability of hepatitis C virus genome. (1994) (68)
Hepatitis C virus transmission by intravenous immunoglobulin. (1994) (68)
Virologic and clinical features of primary infection with human parvovirus 4 in subjects with hemophilia: frequent transmission by virally inactivated clotting factor concentrates (2012) (68)
Characterization of novel canine bocaviruses and their association with respiratory disease. (2012) (67)
Taxonomy of the order Mononegavirales: second update 2018 (2019) (66)
Widespread recombination within human parechoviruses: analysis of temporal dynamics and constraints. (2008) (66)
Detection and Genetic Characterization of Enteroviruses Circulating among Wild Populations of Chimpanzees in Cameroon: Relationship with Human and Simian Enteroviruses (2011) (65)
An immune control model for viral replication in the CNS during presymptomatic HIV infection. (2006) (65)
Clinical relevance of hepatitis C virus genotypes. (1997) (64)
Activated Peripheral CD8 Lymphocytes Express CD4 In Vivo and Are Targets for Infection by Human Immunodeficiency Virus Type 1 (2001) (64)
The genomic underpinnings of eukaryotic virus taxonomy: creating a sequence-based framework for family-level virus classification (2018) (64)
Virus classification – where do you draw the line? (2018) (63)
Recommendations for the nomenclature of enteroviruses and rhinoviruses (2020) (63)
Review: Molecular epidemiology of hepatitis C virus (1997) (63)
Methods for virus classification and the challenge of incorporating metagenomic sequence data. (2015) (62)
Identification of 19 Novel Hepatitis C Virus Subtypes—Further Expanding HCV Classification (2019) (62)
Classification and Genomic Diversity of Enterically Transmitted Hepatitis Viruses. (2018) (62)
The emergence of oseltamivir-resistant pandemic influenza A (H1N1) 2009 virus amongst hospitalised immunocompromised patients in Scotland, November-December, 2009. (2010) (61)
Nosocomial transmission of hepatitis C virus within a British dialysis centre. (1997) (60)
HCV and non-Hodgkin lymphoma (1996) (60)
Detection of neutralising antibodies to SARS-CoV-2 to determine population exposure in Scottish blood donors between March and May 2020 (2020) (60)
Viral persistence, liver disease, and host response in a hepatitis C–like virus rat model (2018) (60)
HIV antigen and antibody detection: variable responses to infection in the Edinburgh haemophiliac cohort (1988) (59)
Variability and pathogenicity of hepatitis E virus genotype 3 variants (2015) (59)
Does drug abuse alter microglial phenotype and cell turnover in the context of advancing HIV infection? (2005) (59)
Modelling mutational and selection pressures on dinucleotides in eukaryotic phyla –selection against CpG and UpA in cytoplasmically expressed RNA and in RNA viruses (2013) (59)
Functional Analysis of RNA Structures Present at the 3′ Extremity of the Murine Norovirus Genome: the Variable Polypyrimidine Tract Plays a Role in Viral Virulence (2010) (59)
Experimental characterization of ventilation systems in buildings (1972) (59)
High detection frequency and viral loads of human rhinovirus species A to C in fecal samples; diagnostic and clinical implications (2012) (58)
Clinical perspectives of emerging pathogens in bleeding disorders (2006) (58)
Investigation of chronic hepatitis C infection in individuals with haemophilia: assessment of invasive and non‐invasive methods (1996) (57)
Interferon treatment for chronic hepatitis C infection in hemophiliacs--influence of virus load, genotype, and liver pathology on response. (1996) (57)
The role of ZAP and OAS3/RNAseL pathways in the attenuation of an RNA virus with elevated frequencies of CpG and UpA dinucleotides (2019) (57)
Convalescent plasma treatment for SARS-CoV-2 infection: analysis of the first 436 donors in England, 22 April to 12 May 2020 (2020) (56)
SARS-CoV-2 RNA detected in blood products from patients with COVID-19 is not associated with infectious virus (2020) (56)
Influence of viraemia and genotype upon serological reactivity in screening assays for antibody to hepatitis C virus (1996) (56)
Genetic characterization of human coxsackievirus A6 variants associated with atypical hand, foot and mouth disease: a potential role of recombination in emergence and pathogenicity (2015) (55)
Circulation of non-polio enteroviruses in 24 EU and EEA countries between 2015 and 2017: a retrospective surveillance study. (2019) (55)
Levels of hepatitis C virus in blood donors infected with different viral genotypes. International HCV Collaborative Study Group. (1996) (55)
Relevance of RIBA‐3 supplementary test to HCV PCR positivity and genotypes for HCV confirmation of blood donors (1996) (55)
Distinct systemic and central nervous system disease patterns in enterovirus and parechovirus infected children. (2014) (54)
Comparative study of three methods for genotyping hepatitis C virus strains in samples from Spanish patients (1996) (54)
Resistance analysis of genotype 3 hepatitis C virus indicates subtypes inherently resistant to nonstructural protein 5A inhibitors (2018) (54)
Hepatitis C infection from anti-D immunoglobulin (1995) (54)
A Novel Diagnostic Target in the Hepatitis C Virus Genome (2009) (53)
Complete coding sequence of hepatitis C virus genotype 6a. (1997) (52)
Does drug abuse influence the microglial response in AIDS and HIV encephalitis? (2004) (52)
Biological characterization of human immunodeficiency virus type 1 clones derived from different organs of an AIDS patient by long-range PCR (1997) (52)
A New Clade of Insect-Specific Flaviviruses from Australian Anopheles Mosquitoes Displays Species-Specific Host Restriction (2017) (52)
Lack of association between type of hepatitis C virus, serum load and severity of liver disease (1996) (52)
The Vietnam Initiative on Zoonotic Infections (VIZIONS): A Strategic Approach to Studying Emerging Zoonotic Infectious Diseases (2015) (52)
The circadian clock components BMAL1 and REV-ERBα regulate flavivirus replication (2019) (52)
Detection of influenza C virus but not influenza D virus in Scottish respiratory samples (2016) (51)
Hepatitis C Viraemia in United Kingdom Blood Donors: A Multicentre Study (1992) (51)
Infection of the CD45RA+ (Naive) Subset of Peripheral CD8+ Lymphocytes by Human Immunodeficiency Virus Type 1 In Vivo (2001) (51)
Infrequent detection of TT virus infection in intravenous drug users, prostitutes, and homosexual men. (1999) (51)
Genotype, viral load and age as independent predictors of treatment outcome of interferon-alpha 2a treatment in patients with chronic hepatitis C. Construct group. (1997) (50)
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Influence of genome-scale RNA structure disruption on the replication of murine norovirus—similar replication kinetics in cell culture but attenuation of viral fitness in vivo (2013) (25)
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GENOMIC INVESTIGATIONS OF ACUTE HEPATITIS OF UNKNOWN AETIOLOGY IN CHILDREN (2022) (19)
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Re-emergence of enterovirus D68 in Europe after easing the COVID-19 lockdown, September 2021 (2021) (15)
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Derivation of a Rational Nomenclature for Hepatitis C Virus by Phylogenetic Analysis of the NS-5 Region (1994) (10)
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Edinburgh Research Explorer Human parvovirus 4 infection, Cameroon (2012) (0)
Explorer Clinical significance of intrahepatic hepatitis C virus levels in patients with chronic HCV infection (2017) (0)
Edinburgh Research Explorer A set of reference sequences for the hepatitis C genotypes 4d, 4f, and 4k covering the full open reading frame (2018) (0)
O.5.4 Comparison of human parechovirus and enterovirus detection frequencies in central nervous system related disease – identification of a specifically neuropathogenic HPeV type (2009) (0)
The Arctic Regions and Polar Discoveries during the Nineteenth Century: With an Account of the New British Exploring Expedition Fitted out in 1875, Its Objects and Prospects (2001) (0)
B-cell non-Hodgkins lymphoma and chronic HCV infection - No evidence of an association (1996) (0)
Rattus norvegicus Characterization of Novel Viruses Carried by Commensal Detection of Zoonotic Pathogens and 2014 (2014) (0)
In reply (2012) (0)
Voyage of the Lady Franklin and Sophia, purchased government ships, under the command of Mr. Penny (2012) (0)
Comparison of population exposure and potential cross-species transmission of echovirus 11, enterovirus 76 and 94 between apes and human populations in sub-Saharan Africa and Europe (2012) (0)
Pathogenicity of hepatitis E virus genotype 3 variaints (2015) (0)
Evolutionary origins of epidemic potential among human RNA viruses (2019) (0)
Edinburgh Research Explorer Detection of Chlamydia trachomatis in genital swabs (1998) (0)
Sir John Franklin and the Arctic Regions: National Cost of Arctic Discovery in the Nineteenth Century (2012) (0)
Long-term (7 yrs) interferon alfa maintenance therapy, with biochemical and virologic response, failed to prevent progression of chronic hepatitis C infection acquired through contaminated intravenous gamma globulin in a patient with common variable immune deficiency (1997) (0)
SARS-CoV-2 genomics beyond the consensus sequence: evidence for circulating mixed viral populations (2020) (0)

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What Schools Are Affiliated With Peter Simmonds?

Peter Simmonds is affiliated with the following schools: