Phillip Geissler
American physical chemist
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Chemistry
Phillip Geissler's Degrees
- PhD Chemistry University of California, Berkeley
- Bachelors Chemistry Stanford University
Why Is Phillip Geissler Influential?
(Suggest an Edit or Addition)According to Wikipedia, Phillip L. Geissler was a theoretical chemist and the Aldo De Benedictis Distinguished Professor of Chemistry at UC Berkeley. Geissler contributed to the theory and understanding of water, which he described as "a famously unusual liquid”. He was particularly interested in collective fluctuations that dictated kinetics in aqueous solutions, solvation, and ion-specific effects. He examined the vibrational spectra of water and the dynamical trajectories of water models and simulated air–water interfaces. He further studied the statistical mechanics of biological polymers and heterogeneous materials; explored pathways and guiding principles for nanoscale self-assembly; and developed techniques of model and algorithm development.
Phillip Geissler's Published Works
Published Works
- Transition path sampling: throwing ropes over rough mountain passes, in the dark. (2002) (1583)
- Ultrafast Hydrogen-Bond Dynamics in the Infrared Spectroscopy of Water (2003) (779)
- Drying-mediated self-assembly of nanoparticles (2003) (746)
- Autoionization in Liquid Water (2001) (576)
- Self-assembly of uniform polyhedral silver nanocrystals into densest packings and exotic superlattices. (2012) (486)
- Membrane bending by protein–protein crowding (2012) (425)
- Hydrogen bonds in liquid water are broken only fleetingly. (2005) (421)
- Unified description of temperature-dependent hydrogen-bond rearrangements in liquid water. (2005) (397)
- The effects of dissolved halide anions on hydrogen bonding in liquid water. (2007) (373)
- Transition Path Sampling (2005) (305)
- Kinetic pathways of ion pair dissociation in water (1999) (262)
- Device-scale perpendicular alignment of colloidal nanorods. (2010) (235)
- Equilibrium fluctuations of a single folded protein reveal a multitude of potential cryptic allosteric sites (2012) (212)
- Scaling of Hydrophobic Solvation Free Energies (2001) (187)
- Single-particle mapping of nonequilibrium nanocrystal transformations (2016) (176)
- Elucidating the mechanism of selective ion adsorption to the liquid water surface (2012) (175)
- Membrane-induced bundling of actin filaments. (2008) (171)
- Avoiding unphysical kinetic traps in Monte Carlo simulations of strongly attractive particles. (2005) (163)
- Direct observation of nanoparticle superlattice formation by using liquid cell transmission electron microscopy. (2012) (152)
- Actin filament curvature biases branching direction (2012) (149)
- Electric field fluctuations drive vibrational dephasing in water. (2005) (136)
- Biased sampling of nonequilibrium trajectories: can fast switching simulations outperform conventional free energy calculation methods? (2005) (132)
- Controlling DNA capture and propagation through artificial nanopores. (2007) (121)
- The role of collective motion in examples of coarsening and self-assembly. (2008) (115)
- Size-dependent protein segregation at membrane interfaces (2016) (103)
- Transition path sampling: Throwing ropes over mountains in the dark (2000) (92)
- Temperature dependence of inhomogeneous broadening: on the meaning of isosbestic points. (2005) (88)
- Impact of assembly state on the defect tolerance of TMV-based light harvesting arrays. (2010) (87)
- Reconfigurable Printed Liquids (2018) (87)
- Probing the conformational distributions of subpersistence length DNA. (2009) (81)
- Self-assembly of magnetic nanoparticles in evaporating solution. (2011) (77)
- Equilibrium free energies from fast-switching trajectories with large time steps. (2005) (68)
- Active biological materials. (2009) (67)
- Long-Range Intra-Protein Communication Can Be Transmitted by Correlated Side-Chain Fluctuations Alone (2011) (67)
- On the fluctuations that drive small ions toward, and away from, interfaces between polar liquids and their vapors (2009) (67)
- Importance sampling and theory of nonequilibrium solvation dynamics in water (2000) (66)
- Mechanism of ion adsorption to aqueous interfaces: Graphene/water vs. air/water (2017) (66)
- Dynamics of Seeded Aβ40-Fibril Growth from Atomistic Molecular Dynamics Simulations: Kinetic Trapping and Reduced Water Mobility in the Locking Step. (2016) (66)
- Water interfaces, solvation, and spectroscopy. (2013) (63)
- Orientational ordering of passivating ligands on CdS nanorods in solution generates strong rod-rod interactions. (2014) (56)
- Unraveling Kinetically-Driven Mechanisms of Gold Nanocrystal Shape Transformations Using Graphene Liquid Cell Electron Microscopy. (2018) (56)
- Patterns without Patches: Hierarchical Self-Assembly of Complex Structures from Simple Building Blocks (2013) (56)
- Chemical dynamics of the protonated water trimer analyzed by transition path sampling (1999) (55)
- Metastability in pressure-induced structural transformations of CdSe/ZnS core/shell nanocrystals. (2012) (53)
- Calculation of proteins' total side-chain torsional entropy and its influence on protein-ligand interactions. (2009) (51)
- Fluctuations within folded proteins: implications for thermodynamic and allosteric regulation. (2015) (49)
- There and (slowly) back again: entropy-driven hysteresis in a model of DNA overstretching. (2006) (49)
- Ab initio analysis of proton transfer dynamics in (H2O)3H (2000) (45)
- Dynamic phase transitions in simple driven kinetic networks. (2013) (45)
- Limits of filopodium stability. (2008) (43)
- Transferable pair potentials for CdS and ZnS crystals. (2012) (42)
- Ambiguities in surface nonlinear spectroscopy calculations (2011) (41)
- Comparison of dynamical heterogeneity in hard-sphere and attractive glass formers. (2004) (40)
- The limited role of nonnative contacts in the folding pathways of a lattice protein. (2008) (40)
- Coexistence of fluid and crystalline phases of proteins in photosynthetic membranes. (2013) (38)
- Precision shooting: Sampling long transition pathways. (2008) (37)
- Efficiency and large deviations in time-asymmetric stochastic heat engines (2014) (37)
- Rare behavior of growth processes via umbrella sampling of trajectories. (2017) (36)
- Ligand-Mediated Interactions between Nanoscale Surfaces Depend Sensitively and Nonlinearly on Temperature, Facet Dimensions, and Ligand Coverage. (2016) (36)
- Near-optimal protocols in complex nonequilibrium transformations (2016) (35)
- Humidity-Induced Phase Transitions in Ion-Containing Block Copolymer Membranes (2008) (34)
- Transition Path Sampling Methods (2006) (34)
- Extensive Conformational Heterogeneity within Protein Cores (2014) (34)
- Contractile equilibration of single cells to step changes in extracellular stiffness. (2012) (33)
- Peptides Adsorbed on Hydrophobic Surfaces—A Sum Frequency Generation Vibrational Spectroscopy and Modeling Study (2007) (32)
- Robust nonequilibrium pathways to microcompartment assembly (2017) (32)
- The impact of conformational fluctuations on self-assembly: cooperative aggregation of archaeal chaperonin proteins. (2009) (31)
- Optical measurement of mechanical forces inside short DNA loops. (2008) (31)
- Necessity of capillary modes in a minimal model of nanoscale hydrophobic solvation (2015) (29)
- From Aβ Filament to Fibril: Molecular Mechanism of Surface-Activated Secondary Nucleation from All-Atom MD Simulations. (2017) (29)
- Putting water on a lattice: the importance of long wavelength density fluctuations in theories of hydrophobic and interfacial phenomena. (2013) (28)
- Exploiting Chromophore-Protein Interactions through Linker Engineering To Tune Photoinduced Dynamics in a Biomimetic Light-Harvesting Platform. (2018) (26)
- Rare-event trajectory ensemble analysis reveals metastable dynamical phases in lattice proteins. (2013) (26)
- An efficient transition path sampling algorithm for nanoparticles under pressure. (2007) (25)
- Toward a simple molecular understanding of sum frequency generation at air-water interfaces. (2009) (25)
- Microscopic origin and macroscopic implications of lane formation in mixtures of oppositely driven particles. (2016) (25)
- Equilibrium Time Correlation Functions from Irreversible Transformations in Trajectory Space (2004) (25)
- Exploiting non-equilibrium phase separation for self-assembly. (2016) (23)
- Nature of slow dynamics in a minimal model of frustration-limited domains. (2003) (22)
- Atomic Force Microscopy of Photosystem II and Its Unit Cell Clustering Quantitatively Delineate the Mesoscale Variability in Arabidopsis Thylakoids (2014) (22)
- The More the Tubular: Dynamic Bundling of Actin Filaments for Membrane Tube Formation (2016) (21)
- Reversible stretching of random heteropolymers. (2001) (21)
- Phase Diagram of Active Brownian Spheres: Crystallization and the Metastability of Motility-Induced Phase Separation. (2020) (20)
- Direct observation of nanoparticle-surfactant assembly and jamming at the water-oil interface (2020) (19)
- Potential energy landscape for proton transfer in (H2O)3H+: comparison of density functional theory and wavefunction-based methods (2000) (18)
- Adsorption of solutes at liquid-vapor interfaces: insights from lattice gas models. (2012) (17)
- A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity. (2018) (17)
- Water Interfaces, Solvation, and Spectroscopy (2014) (17)
- Preserving correlations between trajectories for efficient path sampling. (2015) (16)
- Consequences of local inter-strand dehybridization for large-amplitude bending fluctuations of double-stranded DNA. (2011) (16)
- Mechanical response of random heteropolymers (2001) (14)
- Stretching chimeric DNA: a test for the putative S-form. (2008) (14)
- Large-scale simulations of fluctuating biological membranes. (2009) (14)
- Interfacial ion solvation: Obtaining the thermodynamic limit from molecular simulations. (2018) (13)
- Statistical mechanics of sum frequency generation spectroscopy for the liquid-vapor interface of dilute aqueous salt solutions (2009) (11)
- Erratum: “Avoiding unphysical kinetic traps in Monte Carlo simulations of strongly attractive particles” [J. Chem. Phys. 127, 154101 (2007)] (2008) (11)
- Heterogeneity-induced large deviations in activity and (in some cases) entropy production. (2014) (11)
- Functional Proteomics Identify Cornichon Proteins as Auxiliary Subunits of AMPA Receptors (2009) (11)
- Hydrogen and electric power generation from liquid microjets: Design principles for optimizing conversion efficiency (2016) (11)
- Coarse-grained computer simulation of dynamics in thylakoid membranes: methods and opportunities (2013) (11)
- Short-ranged attractions in jammed liquids: how cooling can melt a glass. (2004) (10)
- Local Ice-like Structure at the Liquid Water Surface. (2022) (10)
- Assessing long-range contributions to the charge asymmetry of ion adsorption at the air–water interface† (2020) (9)
- Consequences of Lattice Mismatch for Phase Equilibrium in Heterostructured Solids. (2019) (9)
- Manipulating Excited-State Dynamics of Individual Light-Harvesting Chromophores through Restricted Motions in a Hydrated Nanoscale Protein Cavity. (2015) (9)
- Microscopic implications of S-DNA. (2010) (8)
- Comment on "Dissociation of water under pressure". (2002) (8)
- Quadrupole-mediated dielectric response and the charge-asymmetric solvation of ions in water. (2021) (7)
- Membrane Hydrophobicity Determines the Activation Free Energy of Passive Lipid Transport (2021) (7)
- Dielectric response of thin water films: a thermodynamic perspective (2022) (6)
- Molecular Properties and Chemical Transformations Near Interfaces. (2021) (6)
- Ion dynamics: Wired-up water. (2012) (6)
- Solvation versus freezing in a heteropolymer globule. (2003) (5)
- Origin of mean-field behavior in an elastic Ising model (2020) (5)
- Conditioning Normalizing Flows for Rare Event Sampling (2022) (5)
- Spontaneous emulsification induced by nanoparticle surfactants. (2020) (5)
- Monte Carlo Sampling in Path Space: Calculating Time Correlation Functions by Transforming Ensembles of Trajectories (2003) (5)
- Breakage of Hydrophobic Contacts Limits the Rate of Passive Lipid Exchange between Membranes. (2020) (4)
- Large-Scale Simulations of Fluctuating Biological Membranes (2010) (4)
- Elastic forces drive nonequilibrium pattern formation in a model of nanocrystal ion exchange (2021) (3)
- Learning Mappings between Equilibrium States of Liquid Systems Using Normalizing Flows (2022) (3)
- Breakage of Hydrophobic Contacts Limits the Rate of Passive Lipid Exchange Between Membranes (2020) (3)
- Dynamics of hydrogen bonds in water: Vibrational echoes and two-dimensional infrared spectroscopy (2004) (3)
- Faster strain fluctuation methods through partial volume updates. (2008) (3)
- The microscopic mechanism of bulk melting of ice. (2021) (3)
- Tuning nonequilibrium phase transitions with inertia. (2021) (3)
- The Buckling Spectra of Nanoparticle Surfactant Assemblies. (2021) (3)
- Ab initio analysis of proton transfer dynamics in H O H 2 3 (2000) (3)
- Revisiting the π → π* transition of the nitrite ion at the air/water interface: A combined experimental and theoretical study (2020) (3)
- Autodissociation of a water molecule in liquid water (2000) (3)
- Communication: Dominance of extreme statistics in a prototype many-body Brownian ratchet. (2012) (3)
- Static Disorder has Dynamic Impact on Energy Transport in Biomimetic Light-Harvesting Complexes (2022) (3)
- The susceptibility of α-helical secondary structure to steric strain: Coarse-grained simulation of dendronized polypeptides. (2010) (2)
- Weak scaling of the contact distance between two fluctuating interfaces with system size. (2020) (2)
- Stress relaxation in unentangled and entangled polymer liquids (1996) (2)
- Lattice Models for Protein Organization throughout Thylakoid Membrane Stacks. (2019) (2)
- Atomic Force Microscopy and Particle Clustering Reveal Altered Photosystem II Organization in the Suppressor of Quenching 1 Mutant of Arabidopsis (2014) (1)
- A Pair of 2D Quantum Liquids: Investigating the Phase Behavior of Indirect Excitons (2022) (1)
- Protein-Protein Crowding as a Driving Force for Membrane Bending during Endocytosis (2012) (1)
- Numerical Simulations of Subsolidus Convection in the Ice Shell of Europa: Implications for the Thermal Evolution and Present State (2004) (1)
- A Thermodynamical Model of the Icy Crust of Europa (2003) (1)
- Ceramide-1-phosphate transfer protein enhances lipid transport by disrupting hydrophobic lipid–membrane contacts (2023) (1)
- Directing the self-assembly of polyhedral silver nanocrystals (2011) (0)
- Assembly and reformation of structured liquids at the water-oil interface (2018) (0)
- BASE-Annual Report 2021 (2022) (0)
- Cluster algorithm for pairwise-interacting particles (2005) (0)
- ERS Membrane bending by protein – protein crowding (2015) (0)
- Using Graphene Liquid Cell Electron Microscopy to Elucidate Nanocrystal Etching Mechanisms (2018) (0)
- Grenoble-France PERCOLATION IN 2D NANOPARTICLE FILMS FROM COLLOIDAL SELF- ASSEMBLY (2006) (0)
- Direct observation of two-step crystallization in nanoparticle superlattice formation (2011) (0)
- 2D to 3D transition of nanoparticles assembled at the liquid interface (2020) (0)
- Ions at interfaces and their spectroscopic consequences (2011) (0)
- 2015 LIQUIDS, CHEMISTRY & PHYSICS OF GORDON RESEARCH CONFERENCE AND SEMINAR (2015) (0)
- Sampling an Ensemble of Low-dissipation Protocols for Nonequilibrium Control (2016) (0)
- Mathematical Modeling of Bacterial Motility by Jing Chen A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Biophysics (2010) (0)
- Simulated Self-Assembly of Photosynthesis Proteins in Stacked Thylakoid Membranes (2010) (0)
- Supplementary Materials for Single-particle mapping of nonequilibrium nanocrystal transformations (2016) (0)
- C2FD20106B 63..74 (2013) (0)
- Event-chain Monte Carlo algorithm for hard-sphere systems (2010) (0)
- Transition States of Passive Lipid Transport are Characterized by Hydrophobic Contacts (2020) (0)
- Supplementary information on evaporation kinetics (2003) (0)
- Wrinkle-Fold Coexistence and Stress Propagation in Nanoparticles at the Oil-Water Interface (2018) (0)
- Critiquing long-range contributions to the charge asymmetry of ion adsorption at the air-water interface (2020) (0)
- Reply to ``Comment on `The nature of slow dynamics in a minimal model of frustration-limited domains'" by J. Schmalian, P.G. Wolynes and S. Wu (2003) (0)
- Monte Carlo S ampling in P ath S pace : Calculating T ime C orrelation F unctions by T ransforming E nsembles of T rajectories (2007) (0)
- Finding Hidden Allosteric Sites in Proteins (2014) (0)
- Human carboanhydrase F131C_C206S double mutant in complex with SA-2 (2017) (0)
- Human carbonic anhydrase II G132C_C206S double mutant in complex with SA-2 (2017) (0)
- Ballistic Ejection of Microdroplets from Overpacked Interfacial Assemblies (2022) (0)
- Dynamic Phase Transitions in Driven Cyclic Kinetic Networks (2014) (0)
- Hydrogen bond dynamics of liquid water studied with vibrational echo peak shift spectroscopy and molecular dynamics simulations (2003) (0)
- for the liquid-vapor interface of dilute aqueous salt solutions (2009) (0)
- Active Crystallization (2020) (0)
- Explosive spontaneous emulsification (2022) (0)
- Two-stage coarsening mechanism in a kinetically constrained model of an attractive colloid. (2005) (0)
- Effects of stochastic growth and inter-filament correlation in an actin-inspired many-body Brownian ratchet (2012) (0)
- Dynamical irrelevance of non-native contacts in a lattice model of protein folding (2008) (0)
- Physical mechanisms of protein segregation at membrane interfaces. (2014) (0)
- Symmetrized Drude Oscillator Force Fields Improve Numerical Performance of Polarizable Molecular Dynamics. (2023) (0)
- Virtual Issue in Memory of David Chandler. (2017) (0)
- Modulated order and unconventional phase coexistence in a model for lattice mismatched solids (2019) (0)
- Epsin 1 ENTH domain bends membranes by protein-protein crowding rather than hydrophobic insertion. (2011) (0)
- Equilibrium Bending Fluctuations of Short DNA (2009) (0)
- Low-Cost Laser-Acoustic PVC Identification System Based on a Simple Neural Network (2022) (0)
- A ligand phase transition on nanorods and its effect on their surface forces (2011) (0)
- Low dissipation in non-equilibrium control: sampling the ensemble of efficient protocols. (2016) (0)
- Title: Direct Mapping of the Evolution of Individual Nanocrystals Undergoing Highly Non-Equilibrium Chemical Transformations (2016) (0)
- Characterization of 2D PSII Crystalline Arrays in Thylakoid Membranes Highly Efficient in Photo-Protective Energy Dissipation by Atomic Force Microscopy (2013) (0)
- Printed Active Liquids (2018) (0)
- Investigating the Liquid State of Carbon By Sumana Raj A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Chemistry (2019) (0)
- The driving forces of membrane remodeling by non-intrinsically curved proteins (2011) (0)
- Fluctuations in Photosynthesis (2015) (0)
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