Rahul Satija

Rahul Satija's AcademicInfluence.com Rankings

Rahul Satija

Biology

#11142

World Rank

#14519

Historical Rank

Molecular Biology

#1683

World Rank

#1712

Historical Rank

biology Degrees

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Biology

Rahul Satija's Degrees

PhD Biology Stanford University

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Rahul Satija's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Integrating single-cell transcriptomic data across different conditions, technologies, and species (2018) (6354)
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets (2015) (5020)
Comprehensive Integration of Single-Cell Data (2019) (4705)
Comprehensive integration of single cell data (2018) (3210)
Integrated analysis of multimodal single-cell data (2020) (2815)
Spatial reconstruction of single-cell gene expression (2015) (2128)
Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression (2019) (1699)
Simultaneous epitope and transcriptome measurement in single cells (2017) (1609)
Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors (2017) (1554)
The Human Cell Atlas (2017) (1285)
Spatial reconstruction of single-cell gene expression data (2015) (1120)
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells (2013) (1096)
The Genome of the Sea Urchin Strongylocentrotus purpuratus (2006) (1056)
Single cell RNA Seq reveals dynamic paracrine control of cellular variation (2014) (848)
Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. (2014) (836)
Single-cell RNA sequencing to explore immune cell heterogeneity (2017) (816)
Integrative single-cell analysis (2019) (765)
Single-cell RNA-seq supports a developmental hierarchy in human oligodendroglioma (2016) (731)
Transcriptome-wide Mapping Reveals Widespread Dynamic-Regulated Pseudouridylation of ncRNA and mRNA (2014) (679)
Dynamic regulatory network controlling Th17 cell differentiation (2013) (626)
Landscape of X chromosome inactivation across human tissues (2016) (596)
High-Resolution Mapping Reveals a Conserved, Widespread, Dynamic mRNA Methylation Program in Yeast Meiosis (2013) (512)
Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics (2018) (505)
The bone marrow microenvironment at single-cell resolution (2019) (493)
Whole exome sequencing of circulating tumor cells provides a window into metastatic prostate cancer (2014) (479)
Single-Cell Genomics Unveils Critical Regulators of Th17 Cell Pathogenicity (2015) (460)
In situ neutron imaging technique for evaluation of water management systems in operating PEM fuel cells (2004) (450)
Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput (2017) (426)
Dynamic profiling of the protein life cycle in response to pathogens (2015) (381)
A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks (2015) (380)
Developmental diversification of cortical inhibitory interneurons (2017) (344)
Deconstructing transcriptional heterogeneity in pluripotent stem cells (2014) (335)
Comprehensive comparative analysis of RNA sequencing methods for degraded or low input samples (2013) (314)
Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells (2019) (270)
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program (2019) (265)
Single-cell chromatin state analysis with Signac (2021) (229)
Preparation of Single‐Cell RNA‐Seq Libraries for Next Generation Sequencing (2014) (225)
Single-cell RNA-seq of rheumatoid arthritis synovial tissue using low-cost microfluidic instrumentation (2018) (219)
Seq-Well: A Portable, Low-Cost Platform for High-Throughput Single-Cell RNA-Seq of Low-Input Samples (2017) (184)
Root Regeneration Triggers an Embryo-like Sequence Guided by Hormonal Interactions (2016) (180)
A Generic and Cell-Type-Specific Wound Response Precedes Regeneration in Planarians. (2015) (175)
Heterogeneity in immune responses: from populations to single cells. (2014) (152)
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells (2021) (142)
Pathogen Cell-to-Cell Variability Drives Heterogeneity in Host Immune Responses (2015) (138)
Phenotypic Convergence: Distinct Transcription Factors Regulate Common Terminal Features (2018) (133)
Corrigendum: Comparative analysis of RNA sequencing methods for degraded or low-input samples (2013) (110)
Molecular transitions in early progenitors during human cord blood hematopoiesis (2018) (106)
Multimodal single-cell chromatin analysis with Signac (2020) (105)
Pathogen Cell-to-Cell Variability Drives Heterogeneity in Host Immune Responses (2015) (105)
Human dendritic cells (DCs) are derived from distinct circulating precursors that are precommitted to become CD1c+ or CD141+ DCs (2016) (99)
Integrated analysis of single cell transcriptomic data across conditions, technologies, and species (2017) (84)
Methods for high-dimensonal analysis of cells dissociated from cyropreserved synovial tissue (2018) (69)
A Multi-step Transcriptional and Chromatin State Cascade Underlies Motor Neuron Programming from Embryonic Stem Cells. (2017) (68)
Erratum: Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput (2017) (67)
The strength and pattern of natural selection on gene expression in rice (2020) (65)
Characterizing the molecular regulation of inhibitory immune checkpoints with multi-modal single-cell screens. (2020) (59)
The Regulatory Factor ZFHX3 Modifies Circadian Function in SCN via an AT Motif-Driven Axis (2015) (57)
A roadmap for the Human Developmental Cell Atlas (2021) (57)
A single cell transcriptional roadmap for cardiopharyngeal fate diversification (2017) (56)
Niche-Selective Inhibition of Pathogenic Th17 Cells by Targeting Metabolic Redundancy (2019) (55)
Toward a Common Coordinate Framework for the Human Body (2019) (53)
Kinetics of adult hematopoietic stem cell differentiation in vivo (2018) (50)
The TAGteam motif facilitates binding of 21 sequence-specific transcription factors in the Drosophila embryo. (2012) (49)
Combining statistical alignment and phylogenetic footprinting to detect regulatory elements (2008) (41)
Comparison and evaluation of statistical error models for scRNA-seq (2021) (39)
BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC (2009) (35)
Perturbation of m 6 AWriters Reveals Two Distinct Classes of mRNA Methylation at Internal and 5 0 Sites (2014) (30)
Stochastic models of sequence evolution including insertion—deletion events (2009) (28)
Large-scale simultaneous measurement of epitopes and transcriptomes in single cells (2017) (27)
The Atypical Calpains: Evolutionary Analyses and Roles in Caenorhabditis elegans Cellular Degeneration (2012) (27)
Characterizing cellular heterogeneity in chromatin state with scCUT&Tag-pro (2021) (25)
Research article - The genome of the sea urchin Strongylocentrotus purpuratus (2006) (21)
Dictionary learning for integrative, multimodal, and scalable single-cell analysis (2022) (18)
Single nucleus multi-omics identifies human cortical cell regulatory genome diversity (2022) (18)
Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics (2017) (17)
A latent subset of human hematopoietic stem cells resists regenerative stress to preserve stemness (2021) (14)
Expanding the CITE-seq tool-kit: Detection of proteins, transcriptomes, clonotypes and CRISPR perturbations with multiplexing, in a single assay (2018) (10)
Author response: The Human Cell Atlas (2017) (10)
Comparison and evaluation of statistical error models for scRNA-seq (2022) (10)
Perturbation of m 6 A Writers Reveals Two Distinct Classes of mRNA Methylation at Internal and 5 Sites Citation (2014) (9)
Single-cell analysis reveals key roles for Bcl11a in regulating stem cell fate decisions (2015) (9)
The bone marrow microenvironment at single-cell resolution (2019) (8)
Corrigendum: Landscape of X chromosome inactivation across human tissues (2018) (7)
Genome-wide functional element detection using pairwise statistical alignment outperforms multiple genome footprinting techniques (2010) (7)
Erratum: The genome of the sea urchin Strongylocentrotus purpuratus (Science (2006) (941)) (2007) (7)
Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seq (2022) (7)
Nanobody-tethered transposition enables multifactorial chromatin profiling at single-cell resolution. (2022) (6)
Author Correction: The bone marrow microenvironment at single-cell resolution (2019) (6)
MERFISHing for spatial context. (2015) (5)
Single-cell RNA-seq of rheumatoid arthritis synovial tissue using low-cost microfluidic instrumentation (2017) (5)
geneBasis: an iterative approach for unsupervised selection of targeted gene panels from scRNA-seq (2021) (5)
Inhibitory neuron diversity originates from cardinal classes shared across germinal zones. (2017) (4)
Nanobody-tethered transposition allows for multifactorial chromatin profiling at single-cell resolution (2022) (4)
geneBasis: an iterative approach for unsupervised selection of targeted gene panels from scRNA-seq (2021) (3)
Erratum: Comparative analysis of RNA sequencing methods for degraded or low-input samples (Nature Methods (2013) 10 (623-629 ) (2014) (3)
Evolutionary systems biology reveals patterns of rice adaptation to drought-prone agro-ecosystems (2021) (3)
Human Developmental Cell Atlas: milestones achieved and the roadmap ahead (2020) (2)
High-resolution mapping reveals a conserved , widespread , dynamic meiotically regulated mRNA methylation program (2014) (2)
Abstract 993: Whole exome sequencing of CTCs as a window into metastatic cancer (2014) (2)
NIH SenNet Consortium to map senescent cells throughout the human lifespan to understand physiological health. (2022) (2)
Evolutionary systems biology reveals patterns of rice adaptation to drought-prone agro-ecosystems. (2021) (2)
Author Correction: Single-cell chromatin state analysis with Signac (2022) (2)
Phenotypic convergence in the brain: distinct transcription factors regulate common terminal neuronal characters (2018) (2)
Tools for Single Cell Genomics [R package Seurat version 3.2.3] (2020) (1)
Sensitive cluster-free differential expression testing (2023) (1)
Strength in numbers from integrated single-cell neuroscience (2018) (1)
Single-cell analysis reveals key roles for Bcl11a in regulating stem cell fate decisions (2015) (0)
The strength and pattern of natural selection on gene expression in rice (2020) (0)
Erratum: Deconstructing transcriptional heterogeneity in pluripotent stem cells (2015) (0)
Phospho-seq: Integrated, multi-modal profiling of intracellular protein dynamics in single cells (2023) (0)
A Multi-step Transcription al and Chromatin State Cascade Underlies Motor Neuron Programming from Embryonic Stem Cells Graphical (2017) (0)
A Distinct Subset of Human Blood Stem Cells Resists Regenerative Stress to Preserve Stemness (2020) (0)
Erratum: Strength in numbers from integrated single-cell neuroscience (2018) (0)
ePoster SessionsCharacterization of Treatment Effects on the Tumor Microenvironment Using Single Cell RNA Sequencing (2017) (0)
Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells (2019) (0)
Integrative single-cell analysis (2019) (0)
Multimodal characterization of antigen-specific CD8+ T cells across SARS-CoV-2 vaccination and infection (2023) (0)
Selective metabolic redundancy of Gpi1 allows for specific inhibition of inflammatory Th17 cells (2019) (0)
Author Correction: Single-cell chromatin state analysis with Signac (2022) (0)
Divergent Levels of CD112 and INKA1 Define a Subset of Human Hematopoietic Stem Cells That Resists Regenerative Stress to Preserve Stemness (2020) (0)
International Symposium on Operations Research and Game Theory : Modeling and Computation ISORGT 18 Organized by Indian Statistical (2018) (0)
CPA-Perturb-seq: Multiplexed single-cell characterization of alternative polyadenylation regulators (2023) (0)
A single-cell transcriptional roadmap for cardiopharyngeal fate diversification (2019) (0)
3017 – A DISTINCT SUBSET OF LATENT LONG-TERM HUMAN HEMATOPOIETIC STEM CELLS RESISTS REGENERATIVE STRESS TO PRESERVES STEMNESS (2020) (0)
Transcriptional and Epigenetic Dysregulation Drives Erythroid and Megakaryocyte Differentiation Bias in the Spleens of Patients with Advanced Myelofibrosis (2022) (0)

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What Schools Are Affiliated With Rahul Satija?

Rahul Satija is affiliated with the following schools:

University of Oxford
California Institute of Technology
Stanford University
Baylor College of Medicine
New York University