Rebecca Doerge | Academic Influence

Rebecca Doerge's AcademicInfluence.com Rankings

Rebecca Doerge

Mathematics

#6005

World Rank

#8386

Historical Rank

Statistics

#570

World Rank

#650

Historical Rank

Measure Theory

#2132

World Rank

#2575

Historical Rank

mathematics Degrees

Rebecca Doerge

Biology

#7061

World Rank

#9913

Historical Rank

Bioinformatics

#113

World Rank

#115

Historical Rank

Computational Biology

#289

World Rank

#290

Historical Rank

biology Degrees

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Mathematics
Biology

Rebecca Doerge's Degrees

PhD Statistics University of California, Berkeley
Bachelors Mathematics University of California, Davis

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Why Is Rebecca Doerge Influential?

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According to Wikipedia, Rebecca Whitbeck Doerge is an American researcher in statistical bioinformatics, known for her research on quantitative traits. She is currently the provost at Rensselaer Polytechnic Institute. She was previously the Trent and Judith Anderson Distinguished Professor of Statistics at Purdue University and then dean of the Mellon College of Science at Carnegie Mellon University, with joint appointments in the departments of biology and statistics.

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Rebecca Doerge's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Empirical threshold values for quantitative trait mapping. (1994) (5061)
Role of transposable elements in heterochromatin and epigenetic control (2004) (1215)
Permutation tests for multiple loci affecting a quantitative character. (1996) (1142)
The Collaborative Cross, a community resource for the genetic analysis of complex traits (2004) (921)
Understanding mechanisms of novel gene expression in polyploids. (2003) (840)
Multifactorial genetics: Mapping and analysis of quantitative trait loci in experimental populations (2002) (781)
Genomewide Nonadditive Gene Regulation in Arabidopsis Allotetraploids (2006) (566)
Epigenetic Natural Variation in Arabidopsis thaliana (2007) (449)
The nature and identification of quantitative trait loci: a community's view (2003) (388)
Global eQTL Mapping Reveals the Complex Genetic Architecture of Transcript-Level Variation in Arabidopsis (2007) (386)
Statistical Design and Analysis of RNA Sequencing Data (2010) (382)
Genomic changes in synthetic Arabidopsis polyploids. (2004) (324)
The fate of duplicated genes in a polyploid plant genome. (2013) (248)
QTL mapping in rice. (1995) (207)
Epigenomic Consequences of Immortalized Plant Cell Suspension Culture (2008) (204)
Moving AHEAD with an international human epigenome project (2008) (202)
High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis. (2006) (191)
Modifying the Schwarz Bayesian Information Criterion to Locate Multiple Interacting Quantitative Trait Loci (2004) (185)
Reversible Histone Acetylation and Deacetylation Mediate Genome-Wide, Promoter-Dependent and Locus-Specific Changes in Gene Expression During Plant Development (2005) (180)
Transfer of T-DNA and Vir proteins to plant cells by Agrobacterium tumefaciens induces expression of host genes involved in mediating transformation and suppresses host defense gene expression. (2003) (172)
Statistical issues in the search for genes affecting quantitative traits in experimental populations (1997) (169)
Identification of QTLs controlling gene expression networks defined a priori (2006) (132)
Identification of quantitative trait loci governing arthritis severity and humoral responses in the murine model of Lyme disease. (1999) (129)
Natural Variation among Arabidopsis thaliana Accessions for Transcriptome Response to Exogenous Salicylic Acid[W][OA] (2007) (124)
Gene expression analysis at the intersection of ploidy and hybridity in maize (2009) (124)
Genomic Survey of Gene Expression Diversity in Arabidopsis thaliana (2006) (121)
Genetic analysis of disease subtypes and sexual dimorphisms in mouse experimental allergic encephalomyelitis (EAE): relapsing/remitting and monophasic remitting/nonrelapsing EAE are immunogenetically distinct. (1999) (121)
Identification of genetic loci controlling the characteristics and severity of brain and spinal cord lesions in experimental allergic encephalomyelitis. (2000) (116)
Analysis of gene expression profiles in response to Sclerotinia sclerotiorum in Brassica napus (2007) (113)
Identification of Novel High-Frequency DNA Methylation Changes in Breast Cancer (2007) (109)
QTL analysis of pest resistance in the wild tomato Lycopersicon pennellii: QTLs controlling acylsugar level and composition (1996) (107)
DAG Lipase Activity Is Necessary for TRP Channel Regulation in Drosophila Photoreceptors (2008) (100)
Comprehensive DNA methylation profiling in a human cancer genome identifies novel epigenetic targets. (2006) (98)
Genetic Analysis of the Influence of Pertussis Toxin on Experimental Allergic Encephalomyelitis Susceptibility: An Environmental Agent Can Override Genetic Checkpoints1 (2000) (94)
Sequence polymorphisms in the chemokines Scya1 (TCA-3), Scya2 (monocyte chemoattractant protein (MCP)-1), and Scya12 (MCP-5) are candidates for eae7, a locus controlling susceptibility to monophasic remitting/nonrelapsing experimental allergic encephalomyelitis. (1999) (87)
Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments (2002) (85)
Combining Affymetrix microarray results (2005) (77)
The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects. (2004) (76)
Genetic control of susceptibility to experimental Lyme arthritis is polygenic and exhibits consistent linkage to multiple loci on chromosome 5 in four independent mouse crosses (2001) (75)
Sensitivity of 70-mer oligonucleotides and cDNAs for microarray analysis of gene expression in Arabidopsis and its related species. (2004) (73)
An Empirical Bayesian Method for Estimating Biological Networks from Temporal Microarray Data (2010) (72)
Accounting for Variability in the Use of Permutation Testing to Detect Quantitative Trait Loci (2000) (72)
Half a Century of Studying Genotype × Environment Interactions in Plant Breeding Experiments (2016) (70)
Naive Application of Permutation Testing Leads to Inflated Type I Error Rates (2008) (69)
Analysis of Gene Expression in Resynthesized Brassica napus Allopolyploids Using Arabidopsis 70mer Oligo Microarrays (2009) (69)
Significance thresholds for QTL interval mapping tests (1996) (67)
Parental contribution and coefficient of coancestry among maize inbreds: pedigree, RFLP, and SSR data (2000) (64)
Molecular response to the pathogen Phytophthora sojae among ten soybean near isogenic lines revealed by comparative transcriptomics (2014) (62)
Interacting quantitative trait loci control phenotypic variation in murine estradiol-regulated responses. (1999) (62)
Epigenomic mapping in Arabidopsis using tiling microarrays (2005) (61)
Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence (2017) (60)
Constructing Genetic Maps by Rapid Chain Delineation (1994) (53)
Gene expression data: The technology and statistical analysis (2003) (51)
The nonsense-mediated decay pathway maintains synapse architecture and synaptic vesicle cycle efficacy (2010) (50)
Cytokinins Secreted by Agrobacterium Promote Transformation by Repressing a Plant Myb Transcription Factor (2013) (49)
A genetic model and molecular markers for wild oat (Avena fatua L.) seed dormancy (1999) (43)
Next-generation transcriptome sequencing of the premenopausal breast epithelium using specimens from a normal human breast tissue bank (2014) (43)
Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling. (2010) (41)
Model selection for quantitative trait locus analysis in polyploids. (2000) (37)
Sex-specific quantitative trait loci govern susceptibility to Theiler's murine encephalomyelitis virus-induced demyelination. (2003) (35)
Evidence that Tmevd2 and eae3 may represent either a common locus or members of a gene complex controlling susceptibility to immunologically mediated demyelination in mice. (1997) (35)
Estimating the Proportion of True Null Hypotheses for Multiple Comparisons (2008) (34)
A Two-Stage Poisson Model for Testing RNA-Seq Data (2011) (34)
Differential expression--the next generation and beyond. (2012) (34)
Extending the Modified Bayesian Information Criterion (mBIC) to Dense Markers and Multiple Interval Mapping (2008) (34)
Detection and localization of a single binary trait locus in experimental populations. (2001) (33)
Variable Selection in High‐Dimensional Multivariate Binary Data with Application to the Analysis of Microbial Community DNA Fingerprints (2002) (33)
Presynaptic Calcium Channel Localization and Calcium-Dependent Synaptic Vesicle Exocytosis Regulated by the Fuseless Protein (2008) (30)
Biased estimators of quantitative trait locus heritability and location in interval mapping (2005) (27)
Multiple testing with discrete data: Proportion of true null hypotheses and two adaptive FDR procedures (2014) (26)
Statistics at the bench : a step-by-step handbook for biologists (2010) (25)
eae36, a Locus on Mouse Chromosome 4, Controls Susceptibility to Experimental Allergic Encephalomyelitis in Older Mice and Mice Immunized in the Winter (2006) (25)
Autoimmune orchitis, epididymitis, and vasitis are immunogenetically distinct lesions. (1998) (24)
Intersection tests for single marker QTL analysis can be more powerful than two marker QTL analysis (2003) (24)
Model Selection in Binary Trait Locus Mapping (2005) (24)
Reverse engineering gene regulatory networks using approximate Bayesian computation (2011) (23)
Methods for genome-wide analysis of gene expression changes in polyploids. (2005) (21)
Meta-Analysis Combines Affymetrix Microarray Results Across Laboratories (2005) (21)
Dynamic Clustering of Gene Expression (2012) (19)
Statistical Design and Analysis of RNA-Seq Data (2010) (18)
Environmental Regulation of Heterosis in the Allopolyploid Arabidopsis suecica1[OPEN] (2016) (18)
A Model Selection-Based Interval-Mapping Method for Autopolyploids (2005) (17)
A Two-Step Multiple Comparison Procedure for a Large Number of Tests and Multiple Treatments (2006) (16)
Interacting Quantitative Trait Loci Control Loss of Peripheral Tolerance and Susceptibility to Autoimmune Ovarian Dysgenesis After Day 3 Thymectomy in Mice1 (2002) (16)
Adding Confidence to Gene Expression Clustering (2005) (15)
A weighted FDR procedure under discrete and heterogeneous null distributions (2015) (14)
Bioinformatics and Computational Biology Solutions Using R and Bioconductor Edited by Gentleman, R., Carey, V., Huber, W., Irizarry, R., and Dudoit, S (2006) (14)
Correct estimation of preferential chromosome pairing in autotetraploids. (2004) (13)
Genome-Wide Association Study in Pseudo-F2 Populations of Switchgrass Identifies Genetic Loci Affecting Heading and Anthesis Dates (2018) (12)
Mapping Quantitative Trait Loci in Experimental Populations (1994) (11)
Selecting Informative Traits for Multivariate Quantitative Trait Locus Mapping Helps to Gain Optimal Power (2013) (10)
The KM-Algorithm Identifies Regulated Genes in Time Series Expression Data (2009) (10)
Novel Resampling Improves Statistical Power for Multiple-Trait QTL Mapping (2017) (9)
CALCULATION OF THE MINIMUM NUMBER OF REPLICATE SPOTS REQUIRED FOR DETECTION OF SIGNIFICANT GENE EXPRESSION FOLD CHANGE INMICROARRA Y EXPERIMENTS (2001) (9)
Generalized estimators for multiple testing: proportion of true nulls and false discovery rate (2014) (8)
Cholesterol Sulfotransferase SULT2B1b Modulates Sensitivity to Death Receptor Ligand TNFα in Castration-Resistant Prostate Cancer (2019) (6)
Old Methods for New Ideas: Genetic Dissection of the Determinants of Gene Expression Levels (2005) (6)
FUNCTIONAL DIVERGENCE OF DUPLICATED GENES IN THE SOYBEAN GENOME (2010) (6)
Statistical Methods in Topological Data Analysis for Complex, High-Dimensional Data (2016) (6)
MAGI: Methylation analysis using genome information. (2014) (5)
Identification of Quantitative Trait Loci for Plant Height, Crown Diameter, and Plant Biomass in a Pseudo-F2 Population of Switchgrass (2019) (4)
Testing for linkage: phase known/unknown. (1995) (3)
MAGI (2014) (3)
Inbreeding Depression in Genotypically Matched Diploid and Tetraploid Maize (2020) (3)
Robust adjustment of sequence tag abundance (2014) (3)
Statistical Advances in Functional Genomics (2007) (2)
Comments on Dr. Aniket Biswas' Letter to the Editor (2020) (2)
QTL Analysis of the Production of Acylsugars Responsible for Pest Resistance in the Wild Tomato, Lycopersicon pennellii (1995) (2)
Phototransduction in drosophila use of microarrays in cloning genes identified by chemically induced mutations causing ERG defects (2007) (2)
Final Technical Report (2018) (2)
INTERVAL MAPPING FOR AUTOPOLYPLOIDS (2003) (2)
A Guide to QTL Mapping with R/qtl by BROMAN, K. W. and SEN, S. (2010) (2)
TOWARDS BETTER FDR PROCEDURES FOR DISCRETE TEST STATISTICS (2012) (1)
AN INTRODUCTION TO MODEL SELECTION FOR QUANTITATIVE TRAIT LOCUS ANALYSIS IN POLYPLOIDS (2000) (1)
CORRECTING FOR AMPLIFICATION BIAS IN NEXT-GENERATION SEQUENCING DATA (2012) (1)
Stopping time property of thresholds of Storey-type FDR procedures (2015) (1)
Proper experimental design and sound statistical inference win every time: a commentary on 'Statistical design and the analysis of gene expression microarray data' by M. Kathleen Kerr and Gary A. Churchill. (2007) (1)
Latent Process Decomposition Of High-Dimensional Count Data (2005) (1)
Statistical methods for mapping multiple complex traits (2007) (1)
STATISTICAL THRESHOLD VALUES FOR LOCATING QUANTITATIVE TRAIT LOCI (1998) (1)
Identification of Quantitative Trait Loci for Plant Height, Crown Diameter, and Plant Biomass in a Pseudo-F2 Population of Switchgrass (2019) (1)
Using R at the Bench: Step-by-Step Data Analytics for Biologists (2015) (1)
ASSOCIATING SNPS WITH BINARY TRAITS (2009) (1)
APPROXIMATE BAYESIAN APPROACHES FOR REVERSE ENGINEERING BIOLOGICAL NETWORKS (2010) (0)
STATISTICAL ISSUES IN THE ANALYSIS OF MICROBIAL COMMUNITIES IN SOIL (2001) (0)
TOPOLOGICAL METHODS FOR THE QUANTIFICATION AND ANALYSIS OF COMPLEX PHENOTYPES (2016) (0)
A consistent estimator of the proportion of nonzero Normal means under certain strong covariance dependence (2014) (0)
A Note on Thresholds for QTL Interval Mapping Tests (1995) (0)
A NON-PARAMETRIC EMPIRICAL BAYES APPROACH FOR ESTIMATING TRANSCRIPT ABUNDANCE IN UN-REPLICATED NEXT-GENERATION SEQUENCING DATA (2010) (0)
Epigenetic variation in tissue culture and pollen is guided by small RNA (2009) (0)
Microarrays: Design, analysis, and applications in functional genomics (2005) (0)
CLUSTERING A SERIES OF REPLICATED POLYPLOID GENE EXPRESSION EXPERIMENTS IN MAIZE (2006) (0)
Deans Offer Advice to Statistics Departments (2018) (0)
Statistical Methods for Affymetrix Tiling Array Data (2009) (0)
Silent running: RNA interference and heterochromatic modification (2007) (0)
Meta-analysis combines Affymetrix microarray results across laboratories: Conference Papers (2005) (0)
STATISTICAL ISSUES IN NEXT-GENERATION SEQUENCING (2009) (0)
Ghost QTL and hotspots in experimental crosses: novel approach for modeling polygenic effects. (2021) (0)
Purdue Statistics: A Journey Through Time (2012) (0)
A HIERARCHICAL BAYESIAN APPROACH FOR DETECTING DIFFERENTIAL GENE EXPRESSION IN UNREPLICATED RNA-SEQUENCING DATA (2011) (0)
GENETIC MAPPING OF GENE EXPRESSION LEVELS: EXPRESSION LEVEL POLYMORPHISM ANALYSIS FOR DISSECTING REGULATORY NETWORKS OF PLANT DISEASE RESISTANCE (2004) (0)
A Bayesian approach to the analysis of cDNA microarray data (2001) (0)
Dysgenesis After Day 3 Thymectomy in Mice Susceptibility to Autoimmune Ovarian Loss of Peripheral Tolerance and Interacting Quantitative Trait Loci Control (2002) (0)
MAPPING QTL WITH COVARIATES (2009) (0)
A BAYESIAN AND COVARIATE APPROACH TO COMBINE RESULTS FROM MULTIPLE MICROARRAY STUDIES (2005) (0)
MEDIATION committee. (1952) (0)
CheckpointsEnvironmental Agent Can Override Genetic Encephalomyelitis Susceptibility: An Toxin on Experimental Allergic Genetic Analysis of the Influence of Pertussis (2000) (0)
Integrating Epigenomic Results (2009) (0)
Reverse engineering gene regulatory networks using approximate Bayesian computation (2011) (0)
Statistical Issues and the Analysis of Next-Generation Sequencing Data (2012) (0)
DiseaseResponses in the Murine Model of Lyme Governing Arthritis Severity and Humoral Identification of Quantitative Trait Loci (1998) (0)
Ghost QTL and hotspots in experimental crosses - novel solution by mixed model with nonzero mean (2019) (0)
Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence (2017) (0)
THE NUANCES OF STATISTICALLY ANALYZING NEXT-GENERATION SEQUENCING DATA (2012) (0)
A TWO-STAGE APPROACH FOR ESTIMATING THE EFFECT OF DNA METHYLATION ON DIFFERENTIAL EXPRESSION USING TILING ARRAY TECHNOLOGY (2008) (0)
DYNAMIC CLUSTERING OF CELL-CYCLE MICROARRAY DATA (2008) (0)
STATISTICAL ANALYSIS OF 70-MER OLIGONUCLEOTIDE MICROARRAY DATA FROM POLYPLOID EXPERIMENTS USING REPEATED DYE-SWAPS (2004) (0)
Incorporating Genomic Annotation into a Hidden Markov Model for DNA Methylation Tiling Array Data (2012) (0)
INTRODUCTION TO BAYESIAN QUANTITATIVE TRAIT LOCUS ANALYSIS FOR POLYPLOIDS (2004) (0)
Statistical Issues in Plant Genomic Data Analysis (2013) (0)
1 ASSOCIATING SNPS WITH BINARY TRAITS (2018) (0)
EVALUATION OF GENOTYPE BY ENVIRONMENT INTERACTIONS FROM UNREPLICATED MULTI-ENVIRONMENTAL TRIALS OF HYBRID MAIZE (2012) (0)
Modeling DNA Methylation Tiling Array Data (2010) (0)
ISSUES IN TESTING DNA METHYLATION USING NEXT-GENERATION SEQUENCING (2011) (0)
Molecular response to the pathogen Phytophthora sojae among ten soybean near isogenic lines revealed by comparative transcriptomics (2014) (0)
A semi-nonparametric mixture model for selecting functionally consistent proteins (2010) (0)
Genomic change during formation of Arabidopsis polyploids (2005) (0)
Robust Adjustment of Sequence Tag Abundance (RASTA) (2014) (0)

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