Robert Stevens
#150,349
Most Influential Person Now
Professor of Bio-Health Informatics
Why Is Robert Stevens Influential?
(Suggest an Edit or Addition)According to Wikipedia, Robert David Stevens is a professor of bio-health informatics. and former Head of Department of Computer Science at The University of Manchester Education Stevens gained his Bachelor of Science degree in biochemistry from the University of Bristol in 1986, a Master of Science degree in bioinformatics in 1991 and a DPhil in Computer Science in 1996, both from the University of York.
Robert Stevens 's Published Works
Published Works
- The minimum information about a genome sequence (MIGS) specification (2008) (1344)
- Taverna: a tool for building and running workflows of services (2006) (1067)
- Investigating Semantic Similarity Measures Across the Gene Ontology: The Relationship Between Sequence and Annotation (2003) (942)
- Taverna: lessons in creating a workflow environment for the life sciences (2006) (764)
- OilEd: a Reason-able Ontology Editor for the Semantic Web (2001) (510)
- myGrid: personalised bioinformatics on the information grid (2003) (487)
- The design and realisation of the myExperiment Virtual Research Environment for social sharing of workflows (2009) (477)
- TAMBIS: Transparent Access to Multiple Bioinformatics Information Sources (1998) (441)
- Ontology-based Knowledge Representation for Bioinformatics (2000) (411)
- Bio-ontologies: current trends and future directions (2006) (406)
- The Manchester OWL Syntax (2006) (377)
- OWL Pizzas: Practical Experience of Teaching OWL-DL: Common Errors & Common Patterns (2004) (371)
- State of the nation in data integration for bioinformatics (2008) (301)
- Transparent access to multiple bioinformatics information sources (2001) (271)
- Semantic Similarity Measures as Tools for Exploring the Gene Ontology (2002) (265)
- An ontology for bioinformatics applications (1999) (260)
- BioCatalogue: a universal catalogue of web services for the life sciences (2010) (235)
- A Suite of Daml+Oil Ontologies to Describe Bioinformatics Web Services and Data (2003) (206)
- Using Semantic Web Technologies for Representing E-science Provenance (2004) (190)
- TAMBIS--Transparent Access to Multiple Bioinformatics Information Sources. (1998) (177)
- Special Issue: The First Provenance Challenge (2008) (172)
- A classification of tasks in bioinformatics (2001) (164)
- A Methodology to Migrate the Gene Ontology to a Description Logic Environment Using DAML+OIL (2002) (150)
- Like more, look more. Look more, like more: The evidence from eye-tracking (2007) (147)
- Mining Taverna's semantic web of provenance (2008) (144)
- Provenance of e-Science Experiments - Experience from Bioinformatics (2003) (138)
- Exploring Williams-Beuren syndrome using myGrid (2004) (121)
- Gene Ontology Consortium (2014) (121)
- The First Provenance Challenge (2008) (116)
- Further developments towards a genome-scale metabolic model of yeast (2010) (116)
- A short study on the success of the Gene Ontology (2004) (114)
- Taverna: lessons in creating a workflow environment for the life sciences: Research Articles (2006) (114)
- Taverna/myGrid: Aligning a Workflow System with the Life Sciences Community (2007) (111)
- OQuaRE: A SQuaRE-based Approach for Evaluating the Quality of Ontologies (2011) (111)
- Ontologies in Bioinformatics (2004) (110)
- Query processing in the TAMBIS bioinformatics source integration system (1999) (109)
- Using OWL to model biological knowledge (2007) (107)
- Towards Competency Question-Driven Ontology Authoring (2014) (105)
- Toward a definition of visual complexity as an implicit measure of cognitive load (2009) (103)
- The travails of visually impaired web travellers (2000) (102)
- Proteasix: A tool for automated and large‐scale prediction of proteases involved in naturally occurring peptide generation (2013) (100)
- Semantically Linking and Browsing Provenance Logs for E-science (2004) (98)
- The myGrid ontology: bioinformatics service discovery (2007) (97)
- Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology (2008) (97)
- Accessibility: a Web engineering approach (2005) (96)
- Designing the myExperiment Virtual Research Environment for the Social Sharing of Workflows (2007) (94)
- Annotating, Linking and Browsing Provenance Logs for {e-Science} (2003) (94)
- Putting OWL in Order: Patterns for Sequences in OWL (2006) (92)
- The TriTryp Phosphatome: analysis of the protein phosphatase catalytic domains (2007) (91)
- Cueing retrospective verbal reports in usability testing through eye-movement replay (2007) (91)
- The Data Mining OPtimization Ontology (2015) (89)
- Automatic annotation of Web services based on workflow definitions (2006) (88)
- BioGateway: a semantic systems biology tool for the life sciences (2009) (78)
- Bias in the reporting of sex and age in biomedical research on mouse models (2016) (78)
- The use of concept maps during knowledge elicitation in ontology development processes – the nutrigenomics use case (2006) (77)
- Evaluating DANTE: Semantic transcoding for visually disabled users (2007) (76)
- The Protege OWL Experience (2005) (76)
- Treating Shimantic Web Syndrome with Ontologies (2004) (75)
- A systematic strategy for large-scale analysis of genotype–phenotype correlations: identification of candidate genes involved in African trypanosomiasis (2007) (73)
- A Little Semantic Web Goes a Long Way in Biology (2005) (72)
- Data curation + process curation=data integration + science (2008) (71)
- The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation (2014) (70)
- Protein classification using ontology classification (2006) (66)
- Quality of Methods Reporting in Animal Models of Colitis (2015) (66)
- Screen Readers Cannot See: Ontology Based Semantic Annotation for Visually Impaired Web Travellers (2004) (65)
- Embedding Knowledge Patterns into OWL (2009) (65)
- Development of FuGO: an ontology for functional genomics investigations. (2006) (64)
- Deciding Semantic Matching of Stateless Services (2006) (64)
- Automating generation of textual class definitions from OWL to English (2011) (63)
- Building a bioinformatics ontology using OIL (2002) (62)
- The {my}Grid Project: Services, Architecture and Demonstrator (2003) (61)
- Structure-based classification and ontology in chemistry (2012) (60)
- Populous: a tool for building OWL ontologies from templates (2012) (59)
- Evaluation of the OQuaRE framework for ontology quality (2013) (58)
- Validating the use and role of visual elements of web pages in navigation with an eye-tracking study (2008) (56)
- Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL (2007) (56)
- Evaluation of the Zucker Diabetic Fatty (ZDF) Rat as a Model for Human Disease Based on Urinary Peptidomic Profiles (2012) (55)
- MIRO: guidelines for minimum information for the reporting of an ontology (2018) (55)
- On the use of agents in a BioInformatics grid (2003) (54)
- Applying Ontology Design Patterns in Bio-ontologies (2008) (54)
- The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process (2009) (52)
- e-Science and biological pathway semantics (2007) (50)
- A foundation for tool based mobility support for visually impaired web users (2003) (49)
- Rendering tables in audio: the interaction of structure and reading styles (2004) (49)
- Overcoming the pitfalls of ontology authoring: Strategies and implications for tool design (2014) (49)
- Using provenance to manage knowledge of In Silico experiments (2007) (48)
- Developing a kidney and urinary pathway knowledge base (2011) (47)
- A Survey of Bioinformatics Database and Software Usage through Mining the Literature (2016) (44)
- Knowledge Integration (2004) (43)
- BioCatalogue: A Curated Web Service Registry For The Life Science Community (2009) (42)
- Adding a Little Reality to Building Ontologies for Biology (2010) (42)
- Evaluation of a non-visual molecule browser (2004) (42)
- {myGrid} and the drug discovery process (2004) (42)
- Guiding the user: an ontology driven interface (1999) (42)
- Transforming the Axiomisation of Ontologies: The Ontology Pre-Processor Language (2009) (41)
- Application of Ontologies in Bioinformatics (2009) (40)
- Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature (2018) (40)
- Web Mobility Guidelines for Visually Impaired Surfers (2001) (40)
- Using reasoning to guide annotation with gene ontology terms in GOAT (2004) (38)
- The KUPKB: a novel Web application to access multiomics data on kidney disease (2012) (37)
- Constructing ontology-driven protein family databases (2005) (36)
- Omics databases on kidney disease: where they can be found and how to benefit from them (2016) (34)
- Issues in learning an ontology from text (2009) (34)
- How people use presentation to search for a link: expanding the understanding of accessibility on the Web (2006) (33)
- Middleware to expand context and preview in hypertext (2004) (33)
- Owl pizzas: Common errors & common patterns from practical experience of teaching owl-dl (2004) (33)
- Semantic and Personalised Service Discovery (2003) (32)
- Enriching the Gene Ontology via the Dissection of Labels Using the Ontology Pre-processor Language (2010) (32)
- OILing the way to machine understandable bioinformatics resources (2002) (32)
- Performing \emph{In Silico} Experiments on the Grid: A Users' Perspective (2003) (32)
- Applying the post-experience eye-tracked protocol (PEEP) method in usability testing. (2006) (31)
- Performing in silico Experiments on the Grid : A Users Perspective (2003) (31)
- The Current State of SKOS Vocabularies on the Web (2012) (29)
- bioNerDS: exploring bioinformatics’ database and software use through literature mining (2013) (29)
- Ten Simple Rules for Selecting a Bio-ontology (2016) (28)
- Engineering use cases for modular development of ontologies in OWL (2012) (28)
- Building Ontologies in DAML + OIL (2003) (28)
- Data Integration in eHealth: A Domain/Disease Specific Roadmap (2007) (27)
- DANTE: annotation and transformation of web pages for visually impaired users (2004) (27)
- Developing Ontologies within Decentralised Settings (2009) (27)
- A Flexible API and Editor for SKOS (2008) (26)
- SemVersion - Versioning RDF and Ontologies (2005) (26)
- Representing Chemicals Using OWL, Description Graphs and Rules (2010) (26)
- A systematic strategy for the discovery of candidate genes responsible for phenotypic variation (2007) (26)
- Measuring the level of activity in community built bio-ontologies (2013) (26)
- Applying OWL Reasoning to Genomic Data (2007) (26)
- Using haptic cues to aid nonvisual structure recognition (2008) (25)
- Using Ontologies and Vocabularies for Dynamic Linking (2008) (25)
- Complex Query Formulation Over Diverse Information Sources in TAMBIS (2003) (24)
- Scientific Lenses to Support Multiple Views over Linked Chemistry Data (2014) (24)
- Knowledge Discovery for Biology with Taverna (2006) (24)
- Inspecting Regularities in Ontology Design Using Clustering (2011) (24)
- Describing Web Services for User-Oriented Retrieval (2005) (24)
- A pilot study to examine the mobility problems of visually impaired users travelling the web (2000) (23)
- Annotation of environmental OMICS data: application to the transcriptomics domain. (2006) (23)
- Automatic Verbalisation of SNOMED Classes Using OntoVerbal (2011) (23)
- An Identity Crisis in the Life Sciences (2006) (22)
- Sealife: A Semantic Grid Browser for the Life Sciences Applied to the Study of Infectious Diseases (2006) (22)
- Wrapping and Interoperating Bioinformatics Resources Using CORBA (2000) (22)
- Ontology Based Semantic Annotation for Enhancing Mobility Support for Visually Impaired Web Users (2003) (22)
- Methodology capture: discriminating between the "best" and the rest of community practice (2008) (22)
- Building a Reason-able Bioinformatics Ontology Using OIL (2001) (22)
- Panoply of utilities in Taverna (2005) (22)
- Logical Gene Ontology Annotations (GOAL): exploring gene ontology annotations with OWL (2012) (21)
- Design insights for the next wave ontology authoring tools (2014) (21)
- ISPIDER Central: an integrated database web-server for proteomics (2008) (21)
- Knowledge Elicitation Plug-In for Protégé: Card Sorting and Laddering (2006) (21)
- How much is too much in a hypertext link?: investigating context and preview -- a formative evaluation (2004) (20)
- Constructing Conceptual Knowledge Artefacts: Activity Patterns in the Ontology Authoring Process (2015) (20)
- PhosphaBase: An ontology‐driven database resource for protein phosphatases (2004) (20)
- GOHSE: Ontology driven linking of biology resources (2006) (20)
- Ontology Learning with Deep Learning: a Case Study on Patient Safety Using PubMed (2016) (19)
- In situ migration of handcrafted ontologies to reason-able forms (2008) (19)
- Distributed ontology building as practical work (2011) (19)
- A Quality Evaluation Framework for Bio-Ontologies (2009) (18)
- Measuring Expert Performance at Manually Classifying Domain Entities under Upper Ontology Classes (2018) (18)
- Augmenting Television With Augmented Reality (2019) (18)
- Towel: Real World Mobility on the Web (1999) (17)
- Augmenting the Expressivity of the Ontology Pre-Processor Language (2008) (17)
- Ontology Web Language (OWL) (2004) (17)
- A review of adjustable lenses for head mounted displays (2017) (16)
- Association of variations in I kappa B-epsilon with Graves’ disease using classical and myGrid methodologies (2004) (16)
- Designing User interfaces to Minimise Common Errors in Ontology Development: The CO-ODE and HyOntUse Projects (2004) (16)
- Towards Semantic Annotation of Bioinformatics Services: Building a Controlled Vocabulary (2008) (16)
- Promotion of Ontological Comprehension: Exposing Terms and Metadata with Web 2.0 (2007) (16)
- A user-centred evaluation framework for the Sealife semantic web browsers (2009) (16)
- Inference Inspector: Improving the verification of ontology authoring actions (2017) (15)
- Process of Building a Vocabulary for the Infection Domain (2008) (15)
- Unlocking Medical Ontologies for Non-Ontology Experts (2011) (15)
- Thematic series on biomedical ontologies in JBMS: challenges and new directions (2014) (15)
- SKOS with OWL: Don't be Full-ish! (2008) (15)
- A Survey of Identifiers and Labels in OWL Ontologies (2010) (15)
- Editing OWL through Generated CNL (2009) (15)
- Workshop on laboratory protocol standards for the Molecular Methods Database. (2013) (14)
- Knowledge Representation for Web Navigation (2009) (14)
- Populous: A tool for populating ontology templates (2010) (14)
- Evaluating the Emotion Ontology through use in the self-reporting of emotional responses at an academic conference (2014) (14)
- The language of gene ontology: a Zipf’s law analysis (2012) (14)
- The Quality of Methods Reporting in Parasitology Experiments (2014) (14)
- Approaching the axiomatic enrichment of the Gene Ontology from a lexical perspective (2015) (14)
- Finding fault: detecting issues in a versioned ontology (2013) (14)
- Audio Representation of Graphs: A Quick Look (2006) (14)
- The SWO Project: A Case Study for Applying Agile Ontology Engineering Methods for Community Driven Ontologies (2012) (13)
- Varifocal technologies providing prescription and VAC mitigation in HMDs using Alvarez lenses (2018) (13)
- Analysing Syntactic Regularities and Irregularities in SNOMED-CT (2012) (13)
- The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases (2013) (13)
- Scientific Lenses over Linked Data: An Approach to Support Task Specific Views of the Data. A Vision (2012) (13)
- Semantic webs for life sciences. (2006) (13)
- Issues in the non-visual presentation of graph based diagrams (2004) (13)
- Traversing the Web: mobility heuristics for visually impaired surfers (2003) (13)
- Ontology Driven Dynamic Linking of Biology Resources (2004) (13)
- Structuring the Life Science Resourceome for Semantic Systems Biology: Lessons from the BioGateway Project (2008) (12)
- Proteome Data Integration: Characteristics and Challenges (2005) (12)
- Extracting patterns of database and software usage from the bioinformatics literature (2014) (12)
- Issues and benefits of using 3D interfaces: visual and verbal tasks (2013) (12)
- Ambiguity and variability of database and software names in bioinformatics (2012) (12)
- Protégé4US: Harvesting Ontology Authoring Data with Protégé (2014) (12)
- Augmenting the mobility of profoundly blind Web travellers (2005) (11)
- From a Service-based eScience Infrastructure to a Semantic Web for the Life Sciences: The Sealife Project (2006) (11)
- Quality assurance of the content of a large DL-based terminology using mixed lexical and semantic criteria: experience with SNOMED CT (2011) (11)
- The semantic web and knowledge grids. (2005) (11)
- Automating class definitions from OWL to English (2010) (11)
- myTea: Connecting the Web to Digital Science on the Desktop (2005) (11)
- Analysing Syntactic Regularities in Ontologies (2012) (11)
- Unveiling antimicrobial peptide-generating human proteases using PROTEASIX. (2018) (10)
- OntoVerbal: a Generic Tool and Practical Application to SNOMED CT (2013) (10)
- The Origin and History of in silico Experiments (2004) (10)
- OntoVerbal-M: a Multilingual Verbaliser for SNOMED CT (2011) (10)
- Supporting the analysis of ontology evolution processes through the combination of static and dynamic scaling functions in OQuaRE (2016) (10)
- What is an ontology (2010) (10)
- Lexical Characterization and Analysis of the BioPortal Ontologies (2013) (10)
- Gene Ontology (GO) (2014) (10)
- Making Entailment Set Changes Explicit Improves the Understanding of Consequences of Ontology Authoring Actions (2016) (9)
- OntoEnrich: A Platform for the Lexical Analysis of Ontologies (2014) (9)
- A Family History Knowledge Base Using OWL 2 (2008) (9)
- Lost in translation: data integration tools meet the Semantic Web (experiences from the Ondex project) (2011) (9)
- Enrichment of {OWL} Ontologies: A Method for Defining Axioms from Labels (2012) (9)
- Observations in collaborative ontology editing using Collaborative Protégé (2009) (9)
- Full-Text Mining: Linking Practice, Protocols and Articles in Biological Research (2008) (9)
- The Proteasix Ontology (2016) (9)
- Mining Semantic Descriptions of Bioinformatics Web Resources from the Literature (2009) (9)
- Ontology for Genome Comparison and Genomic Rearrangements (2004) (9)
- Making Graph-Based Diagrams Work in Sound: The Role of Annotation (2013) (8)
- Comparing ontology authoring workflows with Protégé: In the laboratory, in the tutorial and in the 'wild' (2019) (8)
- Design checks for Java accessibility (2005) (8)
- Developing Ontologies withing Decentralized Settings (2010) (8)
- Semantic web applications to e-science in silico experiments (2004) (8)
- Mining semantic networks of bioinformatics e-resources from the literature (2011) (8)
- Extraction and analysis of the structure of labels in biomedical ontologies (2012) (8)
- Using Ontology Reasoning to Classify Protein Phosphatases (2005) (8)
- Assessing the Safety of Knowledge Patterns in OWL Ontologies (2010) (8)
- What Causes Pneumonia? The Case for a Standard Semantics for "may" in OWL (2008) (8)
- Abstracting and Generalising the Foundational Model Anatomy ( FMA ) Ontology (2009) (7)
- PRECIS: an automated pipeline for producing concise reports about proteins (2001) (7)
- A Case Study on Sepsis Using PubMed and Deep Learning for Ontology Learning. (2017) (7)
- Are bioinformaticians doing e-business? (2002) (7)
- A Solution for the Man-Man Problem in the Family History Knowledge Base (2009) (6)
- Description logics: OWL and DAML + OIL (2005) (6)
- Combining RapidMiner Operators with Bioinformatics Services - A Powerful Combination (2011) (6)
- OntoVerbal: a Protégé plugin for verbalising ontology classes (2012) (6)
- A Pilot Experiment in Knowledge Authoring as Dialogue (2013) (6)
- Exploring semantic deep learning for building reliable and reusable one health knowledge from PubMed systematic reviews and veterinary clinical notes (2019) (6)
- Identifying the challenges of code/theory translation: report from the Code/Theory 2017 workshop (2017) (6)
- Perspectives on automated composition of workflows in the life sciences (2021) (5)
- Report of the user requirements and web based access for eResearch workshops (2006) (5)
- Populous: A Tool for Populating Templates for OWL Ontologies (2010) (5)
- The Semantic Web: Service discovery and provenance in myGrid (2004) (5)
- Practical Experiences in Concurrent, Collaborative Ontology Building Using Collaborative Protégé (2009) (5)
- Transparent interaction; dynamic generation: context histories for shared science (2005) (5)
- GOAT: The Gene Ontology Annotation Tool (2003) (5)
- Prioritising Lexical Patterns to Increase Axiomatisation in Biomedical Ontologies (2014) (5)
- TAMBIS: transparent access to multiple bioinformatics services (2005) (5)
- Populous: A Tool for Populating an Ontology (2011) (5)
- Representation of Part-Whole Relationships in SNOMED CT (2012) (5)
- Barriers to the use of OWL in Knowledge Driven Applications (2008) (5)
- Three Steps to Heaven (2012) (5)
- Wrestling with SUMO and bio-ontologies (2006) (5)
- Computing Identity Co-Reference Across Drug Discovery Datasets (2013) (5)
- Three Steps to Heaven: Semantic Publishing in a Real World Workflow (2012) (5)
- Ontology Based Document Enrichment in Bioinformatics (2002) (5)
- Deep Learning meets Semantic Web: A feasibility study with the Cardiovascular Disease Ontology and PubMed citations (2016) (5)
- Highlights from the Third International Society for Computational Biology ( ISCB ) Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology ( ISMB ) Vienna , Austria 21 July 2007 (2007) (5)
- The Semantic Web : Service discovery and provenance in my Grid (4)
- Introduction To Ontologies (2009) (4)
- Complex Query Formulation Over Diverse Information Sources Using an Ontology (2007) (4)
- Stealthy annotation of experimental biology by spreadsheets (2013) (4)
- Prototype mobility tools for visually impaired surfers (2001) (4)
- TAMBIS Online: a bioinformatics source integration tool (1999) (4)
- Lexical Characterisation of Bio-Ontologies by the Inspection of Regularities in Labels (2015) (4)
- Common Modelling Slips in SKOS Vocabularies (2012) (4)
- Knowledge Discovery for in silico Experiments with Taverna (2006) (4)
- The Eighth Annual Bio-Ontologies Meeting (2005) (3)
- Position Paper: Are Bioinformaticians doing e-Business? (2002) (3)
- Why use an ontology (2013) (3)
- A Quality Assurance Workflow for Ontologies Based on Semantic Regularities (2014) (3)
- Identifying Ontology Design Styles with Metrics (2011) (3)
- Semantic Publishing of Knowledge about Amino Acids (2012) (3)
- Thematic workshop on building an ontology of generalisation for on-demand mapping (2015) (3)
- Augmented Reality Broadcasting: Challenges and Opportunities (2019) (3)
- A Family History Knowledge Base in OWL 2 (2014) (3)
- What about sea urchins? : collaborative ontology building among bio-informaticians (2009) (3)
- RIO: The Regularities Inspector for Ontologies Plugin for Protégé-4 (2012) (3)
- 2 WILLIAMS – BEUREN SYNDROME (2004) (3)
- Processing online crop disease warning information via sensor networks using ISA ontologies. (2013) (3)
- Towards richer descriptions of our collection of genomes andmetagenomes (2006) (3)
- Reification of properties in an ontology (2010) (2)
- Ontologies and Life Science Data Management (2009) (2)
- Towards SQUaRE based Quality Evaluation Framework for Ontologies (2010) (2)
- An Ontology of Bioinformatics Software (2010) (2)
- Technologies and Best Practices for Building Bio‐Ontologies (2010) (2)
- Integrating Biological Databases (2008) (2)
- On the Use of Agents in a BioInformati s (2003) (2)
- Analysis and Classification of Bio-ontologies by the Structure of their Labels (2013) (2)
- Flexibility and utility of the cell cycle ontology (2011) (2)
- Using semantic web technologies to manage complexity and change in biomedical data (2011) (2)
- Genome Science performed with e-Science Tools (2004) (2)
- Ontologies Come of Age with the {iKUP} Browser (2011) (2)
- Exploring Gene Ontology Annotations with OWL (2011) (2)
- What is bioinformatics made from? A survey of database and software usage through full-text mining (2013) (2)
- Using distributed data and tools in bioinformatics applications (2008) (2)
- Document navigation: Ontology or Knowledge Organisation System? (2007) (2)
- Towel: Experiences of Augmenting the Web with Journey Knowledge (2003) (2)
- The Ontogenesis Knowledgeblog: Lightweight Publishing about Semantics, with Lightweight Semantic Publishing (2011) (2)
- Proceedings of WI/IAT 2003 Workshop on Knowledge Grid and Grid Intelligence (2003) (2)
- Prediction of Proteases Involved in Peptide Generation. (2017) (2)
- Ontologies for Molecular Biology (2005) (2)
- Taking a view on bio-ontologies (2012) (2)
- Inspecting regularities and irregularities in SNOMED-CT (2011) (2)
- Reconciling the Semantics of DAG and OWL Ontology Representations (2005) (1)
- Building as We Climb: The Data Working Group at the University of Massachusetts Amherst (2011) (1)
- OBOPedia: An Encyclopaedia of Biology Using OBO Ontologies (2015) (1)
- Data curation 1 process curation^data integration 1 science (2008) (1)
- OWL: PAX of Mind or the AX that Caused the Split? (2008) (1)
- Orientation Relationships (2009) (1)
- Managing synonomy in OWL (2012) (1)
- Tradeoffs in Measuring Entity Similarity for Pattern Detection in OWL Ontologies (2013) (1)
- The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation (2014) (1)
- Managing Biological Information Using Biological Knowledge (2001) (1)
- Semantic Deep Learning: Prior Knowledge and a Type of Four-Term Embedding Analogy to Acquire Treatments for Well-Known Diseases (Preprint) (2019) (1)
- Experiments to Create Ontology-based Disease Models for Diabetic Retinopathy from Different Biomedical Resources (2017) (1)
- Proceedings of the 3rd International Conference on Biomedical Ontology {(ICBO'12)} (2012) (1)
- MetaMap versus BERT Models with Explainable Active Learning: Ontology-Based Experiments with Prior Knowledge for COVID-19 (2022) (1)
- Evaluating and Updating a Design Space for Augmented Reality Television (2022) (1)
- European Semantic Web Conference 2009-Hammad Afzal, Robert Stevens and Goran Nenadic. Mining Semantic Descriptions of Bioinformatics Web Services from the Literature (2012) (1)
- Practical Experiences in Concurrent, Collaborative Ontology Building Using Collaborative Protg (2009) (1)
- BioGateway: Integrated RDF for Life Science Queries (2008) (1)
- Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), KR-MED Series, Graz, Austria, July 21-25, 2012 (2012) (1)
- Analysing Syntactic Regularities and Irregularities in SNOMED-CT (2012) (1)
- My Grid: in-silico experiments in bioinformatics (2003) (1)
- The BioHub Knowledge Base: Ontology and Repository for Sustainable Biosourcing (2016) (1)
- bioNerDS: exploring bioinformatics’ database and software use through literature mining (2013) (1)
- Digital Scholarship and Open Science in Psychology and the Behavioral Sciences (Dagstuhl Perpectives Workshop 15302) (2015) (1)
- Named Entity Recognition and Relation Extraction for COVID-19: Explainable Active Learning with Word2vec Embeddings and Transformer-Based BERT Models (2021) (1)
- The 8th Annual Bio-Ontologies Meeting (2005) (1)
- Something Nasty in the Woodshed: the Public Knowledge Model (2006) (1)
- Populous: a tool for building OWL ontologies from templates (2012) (1)
- The language of gene ontology: a Zipf’s law analysis (2012) (1)
- Ontology for genome comparison and genomic rearrangements: Conference Papers (2004) (1)
- Separating Concepts from Labels (2010) (1)
- {TAMBIS}: {T}ransparent {A}ccess to {M}ultiple {B}ioinformatics {I}nformation {S}ources. An Overview (1998) (1)
- Ontogenesis - An Ontology Tutorial (2010) (1)
- The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases (2013) (1)
- Higher Order Knowledge in Ontologies (2011) (1)
- Ambiguity and variability of database and software names in bioinformatics (2015) (1)
- - 1-Document Navigation : Ontologies or Knowledge Organisation Systems ? (2007) (1)
- Ondex: data integration and visualisation for the Semantic Web (2009) (1)
- NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding (2020) (1)
- From SNOMED CT Expressions to an FHIR RDF Representation: Exploring the Benefits of an Ontology-Based Approach (2019) (1)
- Overview of the European Research work in relation to Information access for visually impaired persons (1995) (0)
- Online The Open University ’ s repository of research publications and other research outputs Editing OWL through generated CNL Conference Item (2016) (0)
- B}uilding a {R}eason-able {B}ioinformatics {O}ntology {U}sing {OIL (2001) (0)
- The seventh annual Bio-Ontologies meeting: Conference Editorials - Moat House Hotel, Glasgow, 30 July 2004. The Seventh Annual Bio-Ontologies Meeting, Moat House Hotel, Glasgow. (2004) (0)
- Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature (2018) (0)
- Ontological commitment: Committing to what an ontology claims (2014) (0)
- PRECIS: An automated pipeline for producing concise protein reports. (2001) (0)
- 2 Requirements for Publishing and Discovering Services (2003) (0)
- The RapidMiner Plugin for Taverna: Bringing Data Mining Tools to Bioinformatics Workflows (2011) (0)
- Mummies on rails (2014) (0)
- DR AF T Application of Ontologies in Bioinformatics (2007) (0)
- Ontology Authoring Inspired By Dialogue (2015) (0)
- Contextualised Travel Support for the Visually Impaired Web Users Continuation Report (2002) (0)
- Thematic series on biomedical ontologies in JBMS: challenges and new directions (2014) (0)
- The State of the Bioinformatics Nation (2010) (0)
- European Semantic Web Conference 2009-Simon Jupp, Sean Bechhofer and robert Stevens. A flexible API and editor for SKOS (2012) (0)
- Building Workflows that Traverse the Bioinformatics Data Landscape (2009) (0)
- LB-006 Quality Of Methods Reporting In Colitis Experiments And The Subsequent Impact On The Development Of A Gut Knowledge Base (2014) (0)
- The BioHub Knowledge Base: Ontology and Repository for Sustainable Biosourcing (2016) (0)
- Usability and accessibility investigation of e-banking registration processes (2003) (0)
- Domain services and Shim Services (2010) (0)
- The Proteasix Ontology (2016) (0)
- Logical Gene Ontology Annotations (GOAL): exploring gene ontology annotations with OWL (2012) (0)
- Chapter # APPLYING OWL REASONING TO GENOMIC DATA (2007) (0)
- Experimentally Induced Mammary Tumors in Swiss Mice with Cephalobus (Nematoda Cephalobidae) (2017) (0)
- owlcs/miro: MIRO: First public release (2017) (0)
- Scientific Lenses: An Approach to Dynamically Vary the Relationships between Datasets. (2013) (0)
- The Origin and History of \emph{In Silico} Experiments (2004) (0)
- Ontology for genome comparison and genomic rearrangements : Ontologies and bio-images (2004) (0)
- A Special Section of Articles From the 8th Annual Bio-Ontologies Meeting (2005) (0)
- generalisation Statements in Ontologies (2011) (0)
- e-LICO: Delivering Data Mining to the Life Science Community (2010) (0)
- Web Authoring for Accessibility: An Ontological View (2005) (0)
- Prescription, accommodation, and presbyopia correcting fluid-filled lenses for digital display technologies (2021) (0)
- Proceedings of the 3rd Workshop on Semantic Publishing (SePublica'13) (2013) (0)
- 2015 SWAT4LS International Conference Editorial (2015) (0)
- BioQuery : A Bioinformatics Source Querying Environment (2003) (0)
- Protg4US: Harvesting Ontology Authoring Data with Protg (2014) (0)
- {G}uiding the {U}ser: {A}n {O}ntology {D}riven {I}nterface (1999) (0)
- International Conference for Biomedical Ontologies (ICBO 2012), KR-MED Series, Graz, Austria July 21-25, 2012 (2012) (0)
- Developing ontologies in decentralised settings (2009) (0)
- ISMB 2003 Bio-ontologies SIG and Sixth Annual Bio-ontologies Meeting Report (2003) (0)
- Nanoinformatics 2010: Community-wide collaboration for the collection, curation, analysis, and dissemination of nanotechnology data (2011) (0)
- Databases of genotoxicity and carcinogenicity and their usefulness for hazard evaluation. (1991) (0)
- Towards Semantic Network of Bioinformatics Resources (2009) (0)
- A curation pipeline for bio-derived chemical feedstocks (2016) (0)
- The Ontogenesis Knowledgeblog: Lightweight publishing about semantics, with semantics (2013) (0)
- Ontology Based Semantic Annotation for Enhancing Mobility Support (2003) (0)
- Fashion magazines: design implications of focus and perception variance between Chinese and UK females (2013) (0)
- Ontogenesis: One Year On (2011) (0)
- An Exercise in Kidney Factomics: From Article Titles to RDF Knowledge Base (2011) (0)
- Call for Polemics at SePublica 2013 (2013) (0)
- Augmenting a Nature Documentary with a Lifelike Hologram in Virtual Reality (2022) (0)
- Mining for Patterns of Semantic Link Usage: Do Domain Users Actually Like Semantic Browsing? (2009) (0)
- Semantic Deep Learning: Prior Knowledge and a Type of Four-Term Embedding Analogy to Acquire Treatments for Well-Known Diseases (2020) (0)
- Creating a focused corpus of factual outcomes from biomedical experiments (2011) (0)
- There is no “other” category: When to avoid “miscellaneous” (2010) (0)
- The Cell Cycle Ontology: An Application Ontology Supporting the Life Sciences (2008) (0)
- The Seventh Annual Bio-Ontologies Meeting Moat House Hotel, Glasgow, 30 July 2004 (2004) (0)
- A Marketplace for Ontologies and Ontology-Based Tools and Applications in the Life Sciences (2005) (0)
- Proceedings of the Joint Workshop on Semantic Technologies Applied to Biomedical Informatics and Individualized Medicine in Conjunction with the 11th International Semantic Web Conference 2012 (ISWC 2012) (2012) (0)
- Ontologies and bio-images (2004) (0)
- {C}omplex {Q}uery {F}ormulation {O}ver {D}iverse {I}nformation {S}ources {U}sing an {O}ntology (1999) (0)
- The Cell Cycle Ontology: an application ontology supporting the study of cell cycle control (2009) (0)
- Supporting the analysis of ontology evolution processes through the combination of static and dynamic scaling functions in OQuaRE (2016) (0)
- 32 Ontologies in Bioinformatics (0)
- Proceedings of the 4th Workshop on Semantic Publishing Co-located with the 11th Extended Semantic Web Conference (ESWC 2014) (2014) (0)
- Automating class definitions from OWL to English Conference or Workshop Item (2018) (0)
- Review on “Community Driven Ontology Development”p (2011) (0)
- Analysing and Classifying Protein Family Data using OWL Reasoning (2009) (0)
- Types of Statement in an Ontology (2011) (0)
- Facets, Tiers and Gems: Ontology Patterns for the Hypernormalisation (2017) (0)
- Proceedings of the Joint 2012 International Conference on Semantic Technologies Applied to Biomedical Informatics and Individualized Medicine - Volume 930 (2012) (0)
- The 8 th annual Bio-Ontologies meeting: Editorials (2005) (0)
- The Open University ’ s repository of research publications and other research outputs Automating class definitions from OWL to English Conference Item (2010) (0)
- Formulation Over Diverse Information Sources in TAMBIS (1999) (0)
- Proceedings of the 4th Workshop on Semantic Publishing co-located with the 11th Extended Semantic Web Conference (ESWC 2014), Anissaras, Greece, May 25th, 2014 (2014) (0)
- Semantic Matching of Biomedical Web Services (2008) (0)
- {M}anaging {B}iological {I}nformation {U}sing {B}iological {K}nowledge (2001) (0)
- Metadata in Ontologies (2011) (0)
- The OntoEnrich platform: using workflows for quality assurance and axiomatic enrichment of ontologies (2016) (0)
- Personalised Information Systems in Multi-Modal Transportation Decision Making (2017) (0)
- A Semantic Browser for a Web of Biomedicine (2006) (0)
- Blogging the Word about Ontologies (2010) (0)
- MIRO: guidelines for minimum information for the reporting of an ontology (2018) (0)
- Call for Participation: Sepublica 2013 -an ESWC Workshop (2013) (0)
- The Data Playground – data driven workflow construction for the life sciences (2005) (0)
- Issues and strategies in ontology authoring: implications for tool design (2014) (0)
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