Roderick Ian. Mackie

Roderick Ian. Mackie's AcademicInfluence.com Rankings

Biology

#9161

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#12331

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Microbiology

#489

World Rank

#550

Historical Rank

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Biology

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Roderick Ian. Mackie's Published Works

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Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Developmental microbial ecology of the neonatal gastrointestinal tract. (1999) (1317)
Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen (2011) (1142)
Occurrence and Diversity of Tetracycline Resistance Genes in Lagoons and Groundwater Underlying Two Swine Production Facilities (2001) (774)
Fate and transport of antibiotic residues and antibiotic resistance genes following land application of manure waste. (2009) (671)
Molecular Ecology of Tetracycline Resistance: Development and Validation of Primers for Detection of Tetracycline Resistance Genes Encoding Ribosomal Protection Proteins (2001) (618)
Molecular ecological analysis of the gastrointestinal microbiota: a review. (2004) (522)
Evolution and ecology of antibiotic resistance genes. (2007) (456)
Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics. (2003) (439)
Biochemical identification and biological origin of key odor components in livestock waste. (1998) (436)
Methanogenic population dynamics during start-up of anaerobic digesters treating municipal solid waste and biosolids. (1998) (390)
Anaerobic codigestion of municipal solid waste and biosolids under various mixing conditions--I. Digester performance. (2001) (389)
Anaerobic codigestion of municipal solid waste and biosolids under various mixing conditions--II: Microbial population dynamics. (2001) (373)
Monitoring and Source Tracking of Tetracycline Resistance Genes in Lagoons and Groundwater Adjacent to Swine Production Facilities over a 3-Year Period (2007) (295)
Application of denaturant gradient gel electrophoresis for the analysis of the porcine gastrointestinal microbiota. (1999) (282)
Dynamics of the bacterial community structure in the rhizosphere of a maize cultivar (2014) (282)
Bacterial Mechanisms to Overcome Inhibitory Effects of Dietary Tannins (2005) (280)
Coccidia-induced mucogenesis promotes the onset of necrotic enteritis by supporting Clostridium perfringens growth. (2008) (261)
Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche (2010) (248)
Thermostable enzymes as biocatalysts in the biofuel industry. (2010) (247)
Establishing populations of Megasphaera elsdenii YE 34 and Butyrivibrio fibrisolvens YE 44 in the rumen of cattle fed high grain diets (2003) (245)
Development, Validation, and Application of PCR Primers for Detection of Tetracycline Efflux Genes of Gram-Negative Bacteria (2002) (243)
Microbiological and chemical changes in the rumen during the stepwise adaptation of sheep to high concentrate diets (1978) (239)
Enhanced Butanol Production by Clostridium beijerinckii BA101 Grown in Semidefined P2 Medium Containing 6 Percent Maltodextrin or Glucose (1997) (212)
Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes (2011) (210)
Mutualistic Fermentative Digestion in the Gastrointestinal Tract: Diversity and Evolution1 (2002) (209)
Microbial population dynamics during start‐up and overload conditions of anaerobic digesters treating municipal solid waste and sewage sludge (2004) (205)
Gut Microbiology and growth-promoting antibiotics in swine (1999) (195)
The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra) (2015) (194)
Denaturing Gradient Gel Electrophoresis Analysis of 16S Ribosomal DNA Amplicons To Monitor Changes in Fecal Bacterial Populations of Weaning Pigs after Introduction of Lactobacillus reuteri Strain MM53 (2000) (194)
Metabolic Activity of Fatty Acid-Oxidizing Bacteria and the Contribution of Acetate, Propionate, Butyrate, and CO2 to Methanogenesis in Cattle Waste at 40 and 60°C (1981) (191)
Changes in Lactate-Producing and Lactate-Utilizing Bacteria in Relation to pH in the Rumen of Sheep During Stepwise Adaptation to a High-Concentrate Diet (1979) (183)
Herbivore nutrition in the subtropics and tropics (1984) (165)
Enumeration of anaerobic bacterial microflora of the equine gastrointestinal tract (1988) (153)
Mechanisms of microbial hydrogen disposal in the human colon and implications for health and disease. (2010) (151)
Molecular Ecological Analysis of the Succession and Diversity of Sulfate-Reducing Bacteria in the Mouse Gastrointestinal Tract (2000) (149)
Tetracycline Residues and Tetracycline Resistance Genes in Groundwater Impacted by Swine Production Facilities (2006) (147)
Characterization of Fecal Bacterial Populations in Canines: Effects of Age, Breed and Dietary Fiber (2002) (146)
Functional Potential of Soil Microbial Communities in the Maize Rhizosphere (2014) (146)
Continuous culture selection of bifidobacteria and lactobacilli from human faecal samples using fructooligosaccharide as selective substrate (1998) (146)
Selective growth of mucolytic bacteria including Clostridium perfringens in a neonatal piglet model of total parenteral nutrition. (2002) (145)
Molecular ecological analysis of dietary and antibiotic-induced alterations of the mouse intestinal microbiota. (2001) (145)
Effect of Condensed Tannins on Bacterial Diversity and Metabolic Activity in the Rat Gastrointestinal Tract (2004) (144)
Effect of fiber source on short-chain fatty acid production and on the growth and toxin production by Clostridium difficile. (1994) (141)
Phylogenetic analysis of the fecal microbial community in herbivorous land and marine iguanas of the Galápagos Islands using 16S rRNA-based pyrosequencing (2011) (139)
Age, introduction of solid feed and weaning are more important determinants of gut bacterial succession in piglets than breed and nursing mother as revealed by a reciprocal cross-fostering model. (2016) (138)
Changes in N-Transforming Archaea and Bacteria in Soil during the Establishment of Bioenergy Crops (2011) (134)
Could microbial symbionts of arthropod guts contribute significantly to nitrogen fixation in terrestrial ecosystems? (2002) (133)
Denaturing gradient gel electrophoresis (2005) (132)
Ecology of Uncultivated Oscillospira Species in the Rumen of Cattle, Sheep, and Reindeer as Assessed by Microscopy and Molecular Approaches (2003) (132)
Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes (2014) (131)
Molecular microbial ecology of the gastrointestinal tract: from phylogeny to function. (2004) (123)
Recent advances in rumen microbial ecology and metabolism: potential impact on nutrient output. (1990) (118)
The use of 16S rRNA-targeted oligonucleotide probes to study competition between ruminal fibrolytic bacteria: development of probes for Ruminococcus species and evidence for bacteriocin production (1994) (115)
Transcriptomic Analyses of Xylan Degradation by Prevotella bryantii and Insights into Energy Acquisition by Xylanolytic Bacteroidetes* (2010) (111)
Antimicrobial Use and Resistance in Swine Waste Treatment Systems (2006) (108)
16S rDNA sequencing of Ruminococcus albus and Ruminococcus flavefaciens: design of a signature probe and its application in adult sheep. (1999) (105)
Novel Rumen Bacterial Diversity in Two Geographically Separated Sub-Species of Reindeer (2007) (105)
Pyrosequencing-Based Analysis of the Mucosal Microbiota in Healthy Individuals Reveals Ubiquitous Bacterial Groups and Micro-Heterogeneity (2011) (103)
Molecular Ecological Analysis of Fecal Bacterial Populations from Term Infants Fed Formula Supplemented with Selected Blends of Prebiotics (2008) (95)
Diverse hydrogen production and consumption pathways influence methane production in ruminants (2019) (94)
Microbiological evaluation of the intraruminal in sacculus digestion technique (1986) (94)
Lipid metabolism in anaerobic ecosystems. (1991) (91)
The role of gut microbes in satisfying the nutritional demands of adult and juvenile wild, black howler monkeys (Alouatta pigra). (2014) (91)
Environmental and Public Health Implications of Water Reuse: Antibiotics, Antibiotic Resistant Bacteria, and Antibiotic Resistance Genes (2013) (89)
Effects of dietary energy level and protein source on nutrient digestion and ruminal nitrogen metabolism in steers. (1991) (89)
Hydrogen Formation and Its Regulation in Ruminococcus albus: Involvement of an Electron-Bifurcating [FeFe]-Hydrogenase, of a Non-Electron-Bifurcating [FeFe]-Hydrogenase, and of a Putative Hydrogen-Sensing [FeFe]-Hydrogenase (2014) (86)
Effect of nitrate and its reduction products on the growth and activity of the rumen microbial population (1988) (86)
Monitoring airborne biotic contaminants in the indoor environment of pig and poultry confinement buildings. (2012) (85)
Increasing the Oxidative Stress Response Allows Escherichia coli To Overcome Inhibitory Effects of Condensed Tannins (2003) (84)
Anaerobic digestion of cattle waste at mesophilic and thermophilic temperatures (1995) (83)
Characterization of two novel saccharolytic, anaerobic thermophiles, Thermoanaerobacterium polysaccharolyticum sp. nov. and Thermoanaerobacterium zeae sp. nov., and emendation of the genus Thermoanaerobacterium. (2001) (81)
The use of 16S rRNA-targeted oligonucleotide probes to study competition between ruminal fibrolytic bacteria: pure-culture studies with cellulose and alkaline peroxide-treated wheat straw (1994) (80)
In vitro metabolism of mycotoxins by bacterial, protozoal and ovine ruminal fluid preparations (1989) (78)
Changes in fecal microbiota of healthy dogs administered amoxicillin. (2010) (76)
Heterologous gene expression in filamentous fungi. (2012) (76)
Impact of different bioenergy crops on N-cycling bacterial and archaeal communities in soil. (2013) (75)
Design and evaluation of a Lactobacillus group-specific ribosomal RNA-targeted hybridization probe and its application to the study of intestinal microecology in pigs. (1998) (71)
Nitrogen metabolism by ruminal microorganisms: current understanding and future perspectives (1996) (70)
Ecological drift and local exposures drive enteric bacterial community differences within species of Galápagos iguanas (2012) (69)
Monitoring the Perturbation of Soil and Groundwater Microbial Communities Due to Pig Production Activities (2013) (69)
Herbivorous rodents (Neotoma spp.) harbour abundant and active foregut microbiota. (2014) (67)
Evolution of Salmonella enterica Virulence via Point Mutations in the Fimbrial Adhesin (2012) (66)
Temporal dynamics of fibrolytic and methanogenic rumen microorganisms during in situ incubation of switchgrass determined by 16S rRNA gene profiling (2014) (66)
Syntrophic association of a butyrate-degrading bacterium and methanosarcina enriched from bovine rumen fluid (1981) (65)
Molecular and Biochemical Analyses of CbCel9A/Cel48A, a Highly Secreted Multi-Modular Cellulase by Caldicellulosiruptor bescii during Growth on Crystalline Cellulose (2013) (64)
Biochemical Analysis of a β-d-Xylosidase and a Bifunctional Xylanase-Ferulic Acid Esterase from a Xylanolytic Gene Cluster in Prevotella ruminicola 23 (2009) (62)
Molecular Ecology Of Macrolide–Lincosamide–Streptogramin B Methylases in Waste Lagoons and Subsurface Waters Associated with Swine Production (2010) (59)
Molecular Cloning, Sequencing, and Expression of a Novel Multidomain Mannanase Gene from Thermoanaerobacterium polysaccharolyticum (1999) (58)
Biochemical and Microbiological Evidence for Fermentative Digestion in Free‐Living Land Iguanas (Conolophus pallidus) and Marine Iguanas (Amblyrhynchus cristatus) on the Galápagos Archipelago (2004) (57)
Gastrointestinal microbes and host interactions (1997) (57)
Halomonas sulfidaeris-dominated microbial community inhabits a 1.8 km-deep subsurface Cambrian Sandstone reservoir. (2014) (56)
Evaluation of Swine-Specific PCR Assays Used for Fecal Source Tracking and Analysis of Molecular Diversity of Swine-Specific “Bacteroidales” Populations (2009) (55)
Biochemical and Mutational Analyses of a Multidomain Cellulase/Mannanase from Caldicellulosiruptor bescii (2012) (55)
CARRIAGE OF ANTIBIOTIC-RESISTANT ENTERIC BACTERIA VARIES AMONG SITES IN GALÁPAGOS REPTILES (2012) (55)
Development of an oligonucleotide probe targeting 16S rRNA and its application for detection and quantitation of the ruminal bacterium Synergistes jonesii in a mixed-population chemostat (1993) (54)
Biochemical Characterization and Relative Expression Levels of Multiple Carbohydrate Esterases of the Xylanolytic Rumen Bacterium Prevotella ruminicola 23 Grown on an Ester-Enriched Substrate (2011) (52)
The BaeSR Two-Component Regulatory System Mediates Resistance to Condensed Tannins in Escherichia coli (2007) (52)
Paenibacillus tundrae sp. nov. and Paenibacillus xylanexedens sp. nov., psychrotolerant, xylan-degrading bacteria from Alaskan tundra. (2009) (52)
Desulfotomaculum genus- and subgenus-specific 16S rRNA hybridization probes for environmental studies. (2000) (51)
Molecular ecology and diversity in gut microbial ecosystems. (2000) (50)
4.1. Denaturing gradient gel electrophoresis (2005) (50)
Outer membrane vesicles from Fibrobacter succinogenes S85 contain an array of carbohydrate‐active enzymes with versatile polysaccharide‐degrading capacity (2017) (49)
Enrichment of specific bacterial and eukaryotic microbes in the rhizosphere of switchgrass (Panicum virgatum L.) through root exudates. (2014) (49)
T-2 toxin metabolism by ruminal bacteria and its effect on their growth (1987) (49)
Molecular Basis for the Selectivity and Specificity of Ligand Recognition by the Family 16 Carbohydrate-binding Modules from Thermoanaerobacterium polysaccharolyticum ManA* (2008) (48)
Volatile fatty acids and anaerobic fermentation in temperate piscivorous and omnivorous freshwater fish (1996) (48)
Biochemical and Structural Insights into Xylan Utilization by the Thermophilic Bacterium Caldanaerobius polysaccharolyticus* (2012) (48)
Gut Environment and Evolution of Mutualistic Fermentative Digestion (1997) (47)
Effects of several mycotoxins on specific growth rate of Butyrivibrio fibrisolvens and toxin degradation in vitro (1987) (47)
Use of 16S-rRNA Based Techniques to Investigate the Ecological Succession of Microbial Populations in the Immature Lamb Rumen: Tracking of a Specific Strain of Inoculated Ruminococcus and Interactions with Other Microbial Populations in Vivo (1999) (46)
Effect of weaning diet on the ecology of adherent lactobacilli in the gastrointestinal tract of the pig. (1995) (46)
Functional Diversity of Four Glycoside Hydrolase Family 3 Enzymes from the Rumen Bacterium Prevotella bryantii B14 (2010) (46)
Functional Analysis of Multiple Single-stranded DNA-binding Proteins from Methanosarcina acetivorans and Their Effects on DNA Synthesis by DNA Polymerase BI* (2004) (45)
Analysis of the hydrogenotrophic microbiota of wild and captive black howler monkeys (Alouatta pigra) in palenque national park, Mexico (2011) (45)
Two New Xylanases with Different Substrate Specificities from the Human Gut Bacterium Bacteroides intestinalis DSM 17393 (2014) (45)
Acetogenesis and the Rumen: Syntrophic Relationships (1994) (44)
Gastrointestinal ecosystems and fermentations (1997) (44)
Untangling the cecal microbiota of feral chickens by culturomic and metagenomic analyses (2017) (44)
Diversity of anaerobic gut fungal populations analysed using ribosomal ITS1 sequences in faeces of wild and domesticated herbivores. (2010) (44)
TNF-α Sensitizes HT-29 Colonic Epithelial Cells to Intestinal Lactobacilli1 (2002) (41)
An in vivo study of ruminal micro-organisms influencing lactate turnover and its contribution to volatile fatty acid production (1984) (40)
Metabolic networks for nitrogen utilization in Prevotella ruminicola23 (2017) (40)
Reconstitution of a Thermostable Xylan-Degrading Enzyme Mixture from the Bacterium Caldicellulosiruptor bescii (2012) (40)
Diversity of Extracellular Proteolytic Activities Among Prevotella Species from the Rumen (1999) (40)
Bacterial Diversity and Distribution in the Holocene Sediments of a Northern Temperate Lake (2007) (39)
Enumeration and Isolation of Lactate-Utilizing Bacteria from the Rumen of Sheep (1979) (39)
Functional Analyses of Multiple Lichenin-Degrading Enzymes from the Rumen Bacterium Ruminococcus albus 8 (2011) (39)
Enzymatic Hydrolysis of Forage Cell Walls (1993) (39)
The application of rumen biotechnology to improve the nutritive value of fibrous feedstuffs: Pre- and post-ingestion (1999) (39)
Repeated ruminal dosing of Ruminococcus spp. does not result in persistence, but changes in other microbial populations occur that can be measured with quantitative 16S-rRNA-based probes. (2001) (38)
Microbial ecology of the ovine rumen (2002) (38)
Comparative Analyses of Two Thermophilic Enzymes Exhibiting both β-1,4 Mannosidic and β-1,4 Glucosidic Cleavage Activities from Caldanaerobius polysaccharolyticus (2010) (38)
Cellulose degradation in the human gut: Ruminococcus champanellensis expands the cellulosome paradigm. (2016) (37)
Commission on Genetic Resources for Food and Agriculture. Micro-organisms and ruminant digestion: State of knowledge, trends and future prospects (2012) (37)
3-Phenylpropanoic Acid Improves the Affinity of Ruminococcus albus for Cellulose in Continuous Culture (1990) (37)
Flow cytometric sorting, phylogenetic analysis and in situ detection of Oscillospira guillermondii, a large, morphologically conspicuous but uncultured ruminal bacterium. (2003) (36)
Fecal microbiota of horses in the clinical setting: potential effects of penicillin and general anesthesia. (2010) (36)
Biochemical Analyses of Multiple Endoxylanases from the Rumen Bacterium Ruminococcus albus 8 and Their Synergistic Activities with Accessory Hemicellulose-Degrading Enzymes (2011) (35)
A Staphylococcus pro-apoptotic peptide induces acute exacerbation of pulmonary fibrosis (2020) (35)
Detection and characterization of extracellular proteases in Butyrivibrio fibrisolvens H17c (1986) (35)
Purification and properties of NADP-dependent glutamate dehydrogenase from Ruminococcus flavefaciens FD-1 (1992) (34)
Degradation of protein and utilization of the hydrolytic products by a predominant ruminal bacterium, Prevotella ruminicola B1(4). (1997) (34)
Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber (2020) (33)
Response of Archaeal Communities in the Rhizosphere of Maize and Soybean to Elevated Atmospheric CO2 Concentrations (2010) (33)
Degradation of complex arabinoxylans by human colonic Bacteroidetes (2021) (33)
Effects of defaunation and various nitrogen supplementation regimens on microbial numbers and activity in the rumen of sheep. (1991) (33)
Molecular and Biochemical Analyses of the GH44 Module of CbMan5B/Cel44A, a Bifunctional Enzyme from the Hyperthermophilic Bacterium Caldicellulosiruptor bescii (2012) (33)
Digestive Challenges for Vertebrate Animals: Microbial Diversity, Cardiorespiratory Coupling, and Dietary Specialization* (2010) (32)
Bacteroides intestinalis DSM 17393, a member of the human colonic microbiome, upregulates multiple endoxylanases during growth on xylan (2016) (31)
Acacia angustissima: Its anti-nutrients constituents, toxicity and possible mechanisms to alleviate the toxicity – a short review (2003) (30)
Biochemical and Mutational Analysis of Glutamine Synthetase Type III from the Rumen Anaerobe Ruminococcus albus 8 (2005) (30)
Dietary Fructo-oligosaccharide Modulates Large Intestinal Inflammatory Responses to Clostridium difficile in Antibiotic-compromised Mice (1996) (30)
Evaluation of toxicity of Acacia angustissima in a rat bioassay (2001) (29)
Fermentation of stachyose and raffinose by hind‐gut bacteria of the weanling pig (1994) (29)
Sensitive plate assay for screening and detection of bacterial polyurethanase activity (2001) (27)
Amino acid utilization by the ruminal bacterium Synergistes jonesii strain 78-1 (1993) (27)
Description of Caldanaerobius fijiensis gen. nov., sp. nov., an inulin-degrading, ethanol-producing, thermophilic bacterium from a Fijian hot spring sediment, and reclassification of Thermoanaerobacterium polysaccharolyticum and Thermoanaerobacterium zeae as Caldanaerobius polysaccharolyticus comb. (2008) (27)
Purification and characterization of a thermostable alpha-galactosidase from Thermoanaerobacterium polysaccharolyticum. (2002) (26)
Gastrointestinal microbiology. Volume 1: Gastrointestinal ecosystems and fermentations. (1996) (26)
Biochemical and Domain Analyses of FSUAxe6B, a Modular Acetyl Xylan Esterase, Identify a Unique Carbohydrate Binding Module in Fibrobacter succinogenes S85 (2009) (26)
Effect of insertional mutations in the pueA and pueB genes encoding two polyurethanases in Pseudomonas chlororaphis contained within a gene cluster (2007) (26)
Occurrence and expression of genes encoding methyl-compound production in rumen bacteria (2019) (26)
Digesta retention time in the Galápagos tortoise (Chelonoidis nigra). (2011) (24)
Comparative Microbial Diversity in the Gastrointestinal Tracts of Food Animal Species1 (2002) (24)
β-Glucanase expression by Ruminococcus flavefaciens FD-1 (1992) (23)
Molecular Analysis of Archaea, Bacteria and Eucarya Communities in the Rumen - Review - (1999) (23)
Probiotic Dosing of Ruminococcus flavefaciens Affects Rumen Microbiome Structure and Function in Reindeer (2013) (23)
Detection of tetracycline resistance genes by PCR methods. (2004) (23)
Biochemical and Mutational Analyses of a Unique Clamp Loader Complex in the Archaeon Methanosarcina acetivorans* (2005) (22)
Nitrogen Utilization and Metabolism in Ruminococcus albus 8 (2014) (21)
Biochemical and Structural Analyses of Two Cryptic Esterases in Bacteroides intestinalis and their Synergistic Activities with Cognate Xylanases. (2017) (21)
Lignocellulose-derived thin stillage composition and efficient biological treatment with a high-rate hybrid anaerobic bioreactor system (2016) (21)
Thermophilic methane production from dairy cattle waste (1990) (21)
Identification of methanogenesis and syntrophy as important microbial metabolic processes for optimal thermophilic anaerobic digestion of energy cane thin stillage (2019) (19)
Manipulation of nitrogen digestion by sheep using defaunation and various nitrogen supplementation regimens. (1991) (18)
Molecular methods in microbial ecology. (2005) (18)
Degradation of wheat straw and alkaline hydrogen peroxide-treated wheat straw by Ruminococcus albus 8 and Ruminococcus flavefaciens FD-1. (1991) (18)
Domain Analysis of a Modular α-l-Arabinofuranosidase with a Unique Carbohydrate Binding Strategy from the Fiber-Degrading Bacterium Fibrobacter succinogenes S85 (2010) (18)
Generation of an E. coli platform strain for improved sucrose utilization using adaptive laboratory evolution (2019) (18)
Combined Genomic, Transcriptomic, Proteomic, and Physiological Characterization of the Growth of Pecoramyces sp. F1 in Monoculture and Co-culture With a Syntrophic Methanogen (2019) (17)
Orenia metallireducens sp. nov. Strain Z6, a Novel Metal-Reducing Member of the Phylum Firmicutes from the Deep Subsurface (2016) (17)
Characterization of the gene encoding glutamate dehydrogenase (gdhA) from the ruminal bacterium Ruminococcus flavefaciens FD-1 (2003) (17)
Ribotyping of adherent Lactobacillus from weaning pigs: a basis for probiotic selection based on diet and gut compartment. (1997) (17)
Gastrointestinal Detoxification and Digestive Disorders in Ruminant Animals (1997) (17)
Metagenomic-Based Study of the Phylogenetic and Functional Gene Diversity in Galápagos Land and Marine Iguanas (2015) (16)
Partial characterization of a DNA restriction endonuclease from Ruminococcus flavefaciens FD-1 and its inhibition by site-specific adenine methylation (1992) (16)
“Candidatus Paraporphyromonas polyenzymogenes” encodes multi-modular cellulases linked to the type IX secretion system (2018) (16)
Microbial community analysis of rectal methanogens and sulfate reducing bacteria in two non‐human primate species (2009) (16)
Evidence that Cellulolysis by an Anaerobic Ruminal Fungus Is Catabolite Regulated by Glucose, Cellobiose, and Soluble Starch (1990) (16)
Molecular microbial ecology in gut ecosystems (1999) (15)
Fecal microbiota of calves in the clinical setting: effect of penicillin treatment. (2011) (15)
Gastrointestinal microbiology. Volume 2: Gastrointestinal microbes and host interactions. (1996) (14)
Structural and Biochemical Basis for Mannan Utilization by Caldanaerobius polysaccharolyticus Strain ATCC BAA-17* (2014) (14)
Dietary Supplementation of Usnic Acid, an Antimicrobial Compound in Lichens, Does Not Affect Rumen Bacterial Diversity or Density in Reindeer (2014) (14)
Partial purification and characterization of Ral8I, a class-IIS restriction endonuclease from Ruminococcus albus 8 which recognizes 5'-GGATC. (1992) (14)
Fe-oxide grain coatings support bacterial Fe-reducing metabolisms in 1.7−2.0 km-deep subsurface quartz arenite sandstone reservoirs of the Illinois Basin (USA) (2014) (14)
Transport and intracellular metabolism of major feed compounds by ruminal bacteria: the potential for metabolic manipulation (1994) (14)
Effects of oleaginous yeast on growth performance, fatty acid composition of muscles, and energy utilization by poultry (1996) (13)
Dynamic Distribution of Gut Microbiota in Pigs at Different Growth Stages: Composition and Contribution (2022) (13)
Phylogenetic Evidence for Lateral Gene Transfer in the Intestine of Marine Iguanas (2010) (13)
Agricultural use of antibiotics and antibiotic resistance (2017) (12)
29. Environmental Impacts of Antibiotic Use in the Animal Production Industry (2012) (12)
Supplementing with Non-Glycoside Hydrolase Proteins Enhances Enzymatic Deconstruction of Plant Biomass (2012) (12)
Automatic nitrogen-15 analyser for use in biological research. (1986) (12)
Ameliorating the toxic effects of Acacia angustissima with polyethylene glycol in rats (2003) (12)
Proteolytic Activities of the Starch-Fermenting Ruminal Bacterium, Streptococcus bovis (1999) (12)
Microbial digestion of forages in herbivores (1987) (12)
Molecular analyses of an unusual translesion DNA polymerase from Methanosarcina acetivorans C2A. (2010) (11)
Genomic fingerprinting and serotyping of Salmonella from Galápagos iguanas demonstrates island differences in strain diversity. (2011) (11)
The concentration of lactate in relation to other components of bovine mammary secretion during premature regression and after resumption of milking (1977) (11)
Identification of Halophilic Microbes in Lung Fibrotic Tissue by Oligotyping (2018) (11)
Mutational Insights into the Roles of Amino Acid Residues in Ligand Binding for Two Closely Related Family 16 Carbohydrate Binding Modules* (2010) (10)
Microbiology of feed samples incubated in nylon bags in the rumen of sheep (1983) (10)
Inhibition of lung microbiota-derived proapoptotic peptides ameliorates acute exacerbation of pulmonary fibrosis (2022) (10)
Structural and functional analyses of a glycoside hydrolase family 5 enzyme with an unexpected β-fucosidase activity. (2011) (10)
Functional and modular analyses of diverse endoglucanases from Ruminococcus albus 8, a specialist plant cell wall degrading bacterium (2016) (10)
Biosynthesis of Nitrogen-Containing Compounds (1997) (10)
Molecular Analyses of a Three-Subunit Euryarchaeal Clamp Loader Complex from Methanosarcina acetivorans (2009) (9)
Biotype and Ribotype Diversity among Lactobacillus Isolates from the Mouse Ileum (1997) (9)
Chapter 4 Microbial ecology of the digestive tract in reindeer: seasonal changes (2005) (9)
Characterization of the microbial community colonizing the anal and vulvar pores of helminths from the hindgut of zebras (1989) (9)
Mutational and Structural Analyses of Caldanaerobius polysaccharolyticus Man5B Reveal Novel Active Site Residues for Family 5 Glycoside Hydrolases (2013) (9)
Thermophilic Degradation of Hemicellulose, a Critical Feedstock in the Production of Bioenergy and Other Value-Added Products (2020) (9)
Purification, Characterization, and Expression of Multiple Glutamine Synthetases from Prevotella ruminicola 23 (2011) (9)
Genetics of ruminal anaerobic bacteria (1997) (9)
Hydrogen and formate production and utilisation in the rumen and the human colon (2022) (9)
Degradation Products of Complex Arabinoxylans by Bacteroides intestinalis Enhance the Host Immune Response (2021) (8)
Rumen (2020) (8)
Rumen microbial ecology in reindeer - Adaptations to a unique diet (2004) (8)
Enzymatic Mechanism for Arabinan Degradation and Transport in the Thermophilic Bacterium Caldanaerobius polysaccharolyticus (2017) (8)
Salmonella Strains Isolated from Galápagos Iguanas Show Spatial Structuring of Serovar and Genomic Diversity (2012) (8)
Column chromatography of 2-aminoethylphosphonic acid. (1973) (8)
Multiple cellobiohydrolases and cellobiose phosphorylases cooperate in the ruminal bacterium Ruminococcus albus 8 to degrade cellooligosaccharides (2016) (7)
Fermentative Digestion in Herbivorous Lizards : Bacterial Population Analysis in the Intestinal Tract of Free-Living Land (Conolophus pallidus) and Marine Iguanas (Amblyrynchus cristatus) on the Galapagos Archipelago (2009) (7)
The restriction endonuclease RflFII, isolated from Ruminococcus flavefaciens FD-1, recognizes the sequence 5'-AGTACT-3', and is inhibited by site-specific adenine methylation. (1994) (7)
The contribution of antibiotic residues and antibiotic resistance genes from livestock operations to antibiotic resistance in the environment and food chain. (2011) (7)
ADAPTATION OF RUMEN BACTERIA TO SODIUM AND MONENSIN (1984) (7)
Peptide and amino acid transport in Streptococcus bovis (1990) (6)
The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra) (2014) (6)
Electron flow: key to mitigating ruminant methanogenesis. (2022) (6)
Efficiency of bacterial protein synthesis during anaerobic degradation of cattle waste (1990) (6)
Bacterial Colonization on Metal Surfaces in Animal Buildings: Implications for Microbial-induced Corrosion (1994) (6)
Cellulase and xylanase genes from ruminal bacteria: domain analysis suggests a non-cellulosome-like model for organization of the cellulase complex. (1997) (5)
Assessment of microbial diversity associated with CH4 emission from sugarcane vinasse storage and transportation systems. (2020) (5)
Let them eat fruit (2018) (5)
Stepwise adaptation of sheep fed ad libitum to a high concentrate diet and its effect on ruminal pH and lactic concentration (1981) (5)
Inhibition of the exo-β-1,4-glucanase from Ruminococcus flavefaciens FD-1 by a specific monoclonal antibody (1994) (4)
Evidence that Cellulolysis by an Anaerobic Ruminal Fungus Is Catabolite Regulated by Glucose, Cellobiose, and Soluble Starch (1991) (4)
Herbivore nutrition in the subtropics and tropics. Proceedings of the International Symposium on Herbivore Nutrition in the Subtropics and Tropics held from 5-9 April 1983 at the Council for Scientific and Industrial Research Conference Centre, Pretoria, Republic of South Africa. (1984) (4)
Interspecies Hydrogen Transfer and Its Effects on Global Transcript Abundance in Ruminococcus albus, a Predominant Fiber‐Degrading Species in the Rumen (2016) (4)
Xylan Deconstruction by Thermophilic Thermoanaerobacterium bryantii Hemicellulases Is Stimulated by Two Oxidoreductases (2022) (4)
Genome Sequence of a Thermoacidophilic Methanotroph Belonging to the Verrucomicrobiota Phylum from Geothermal Hot Springs in Yellowstone National Park: A Metagenomic Assembly and Reconstruction (2022) (3)
Animal feed science and techniology: Introduction (2001) (3)
Improved Method for Isolation of Microbial RNA from Biofuel Feedstock for Metatranscriptomics (2013) (3)
Ruminal protein breakdown and ammonia assimilation (2020) (3)
Phenotypic and genotypic characterization of antibiotic-resistant soil and manure bacteria adjacent to swine production facilities (2013) (3)
High Protein Diet Reduces Food Intake and Adiposity and Alters GI Microbiome (2013) (3)
Alternative hydrogen uptake pathways suppress methane production in ruminants (2018) (3)
A Review of Gastrointestinal Microbiology with Special Emphasis on Molecular Microbial Ecology Approaches (2005) (3)
Complete nucleotide sequence of a cryptic plasmid, pBAW301, from the ruminal anaerobe Ruminococcus flavefaciens R13e2. (1996) (3)
Novel rumen bacterial isolates from reindeer (Rangifer tarandus tarandus) (2004) (2)
A LABORATORY STUDY ON METAL CORROSION BY AMMONIA GAS (1999) (2)
Convergent Evolution of Invasive Serovars of Salmonella Enterica via Point Mutations in the Type 1 Fimbrial Adhesion FimH (2012) (2)
Hess from Cow Rumen Metagenomic Discovery of Biomass-Degrading Genes and Genomes (2012) (2)
Inhibition of biomethane production under antibiotics in poultry litter (2020) (2)
The ruminal metabolism of lactic acid. (1977) (2)
A STUDY ON THE POTENTIAL OF METAL CORROSION BY SULFATE-REDUCING BACTERIA IN ANIMAL BUILDINGS (1999) (2)
The Genus Prevotella, A Resource of Enzymes for Hemicellulose Degradation (2010) (2)
Diversity of fiber-adherent bacteria on three potential bioenergy feedstocks during digestion in the cow rumen (2009) (2)
5-Deoxyfl avan-3-ol-based proanthocyanidins with antinutritional and antimicrobial properties from the forage legume Acaciella angustissima (2011) (2)
Development of a signature probe targeting the 16S-23S rRNA internal transcribed spacer of a ruminal Ruminococcus flavefaciens isolate from reindeer. (2011) (2)
Variations in the 16S-23S rRNA internal transcribed spacer of fibrolytic Butyrivibrio isolates from the reindeer rumen. (2011) (2)
Use of surface analysis techniques to determine the mechanisms of metal corrosion in animal buildings (1997) (2)
Methanogenesis and sulfate reduction in timber and drainage water from a gold mine (1989) (2)
Restoration of soil organic carbon with cultivation of perennial biofuel crops (2009) (1)
Prokaryote Diversity of Epithelial Mucosal Biofilms in the Human Digestive Tract (2007) (1)
Probiotics and prebiotics: scientific aspects (2005) (1)
Improving rumen function (2020) (1)
The use of oligonucleotide probes to study the ecology of ruminal microbial populations (1996) (1)
Biochemical analyses of multiple endoxylanases from the (2011) (1)
Terrestrial Vertebrate Animal Metagenomics: Herbivorous Reptiles (2014) (1)
Bioenergetic targets for controlling growth of rumen bacteria; insights into the molecular mode of action of monensin (2017) (0)
Systems analysis of the effect of hydrogen sulfide on the growth of Methylococcus capsulatus Bath (2022) (0)
Bacterium Caldicellulosiruptor bescii Xylan-Degrading Enzyme Mixture from the Reconstitution of a Thermostable (2014) (0)
Occurrence and expression of genes encoding methyl-compound production in rumen bacteria (2019) (0)
Discovery of substrate-targeted enzymes for the degradation of biomass by Metatranscriptomics (2009) (0)
Biotransformation of anti-nutritional factors by rumen microbiota (1998) (0)
METHODS IN GUT MICROBIAL ECOLOGY FOR RUMINANTS Methods in Gut Microbial Ecology for Ruminants (2013) (0)
Biofilm formation and growth dynamics of Prevotella ruminicola during the colonisation of fresh perennial ryegrass (2010) (0)
Metabolic networks for nitrogen utilization in Prevotella ruminicola23 (2017) (0)
Evidence thatCellulolysis byan Anaerobic Ruminal FungusIs Catabolite Regulated byGlucose, Cellobiose, andSoluble Starch (1990) (0)
Effects ofSeveral Mycotoxins on Specific GrowthRateof Butyrivibrio fibrisolvens andToxinDegradation InVitro (1987) (0)
Microbial diversity in gut ecosystems (1997) (0)
Probiotic Dosing of Ruminococcus flavefaciens Affects Rumen Microbiome Structure and Function in Reindeer (2013) (0)
Hydrogen and formate production and utilisation in the rumen and the human colon (2022) (0)
Preface (2006) (0)
Transcriptional analyses of carbohydrate metabolism in Prevotella ruminicola (2009) (0)
207 Polyclonal Antibodies Inhibit Growth of Key Cellulolytic Rumen Bacterial Species (2022) (0)
E COMMISSION ON GENETIC RESOURCES FOR FOOD AND AGRICULTURE MICRO-ORGANISMS AND RUMINANT DIGESTION : STATE OF KNOWLEDGE , TRENDS AND FUTURE PROSPECTS (2012) (0)
Tolerance of prebiotic supplemented infant formula and impact on composition of fecal microbiota (2007) (0)
Inhibition of lung microbiota-derived proapoptotic peptides ameliorates acute exacerbation of pulmonary fibrosis (2022) (0)
Physiological and Ecological Adaptations to Feeding in Vertebrates. Edited by J Matthias Starck and , Tobias Wang. Enfield (New Hampshire): Science Publishers. $114.00. viii + 425 p; ill.; index. ISBN: 1–57808–246–3. 2005. (2006) (0)
Book Review:Quantitative Aspects of Ruminant Digestion and Metabolism. J. M. Forbes, J. France (1995) (0)
Supplementary Material for: Lignocellulose-derived thin stillage composition and efficient biological treatment with a high-rate hybrid anaerobic bioreactor system (2016) (0)
Efficiency of Bacterial Protein Synthesis and Methanogenesis During Anaerobic Degradation (1990) (0)
Dietary Supplementation of Usnic Acid, an Antimicrobial Compound in Lichens, Does Not Affect Rumen Bacterial Diversity or Density in Reindeer (2014) (0)
Characterization oftheMicrobial Community Colonizing theAnal andVulvar PoresofHelminths fromtheHindgut ofZebras (1989) (0)
1 Molecular Methods in Microbial Ecology (2005) (0)
STEPVfISE ADAPTATION OF SHEEP FED AD LIBITUM TO A HIGH CONCENTRATE DIET AND ITS EFFECT ON RUMINAL pH AND LACTIC ACID CONCENTRATION (2010) (0)
Metagenomic-Based Study of the Phylogenetic and Functional Gene Diversity in Galápagos Land and Marine Iguanas (2014) (0)
A Staphylococcus pro-apoptotic peptide induces acute exacerbation of pulmonary fibrosis (2020) (0)
Transcriptional responses of Prevotella ruminicola reflect spatial and temporal differences in available nutrients from fresh perennial ryegrass (2010) (0)
Rumen bacteria in sheep fed supplemented teff hay (1983) (0)
“Candidatus Paraporphyromonas polyenzymogenes” encodes multi-modular cellulases linked to the type IX secretion system (2018) (0)
12 Acetogenesis and the Rumen : Syntrophic Relationships (0)
Animal Biotechnology: Preface (2006) (0)
Structure and Function of a Novel Bi‐Functional Xylanase‐Esterase (2010) (0)
Bacint_04212 ferulic acid esterase (2017) (0)
Diverse hydrogen production and consumption pathways influence methane production in ruminants (2019) (0)
Cloning and sequencing of a NADP-dependent glutamate dehydrogenase from the cellulolytic ruminal bacterium Ruminococcus flavefaciens FD-1. (1995) (0)
Identification and Phenotypic Evaluation of Microbes Isolated from Breast and Formula-fed Infants Delivered Either Vaginally or by Cesarean Section (P11-075-19). (2019) (0)
Let them eat fruit (2018) (0)

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