Roderick Ian. Mackie
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(Suggest an Edit or Addition)Roderick Ian. Mackie's Published Works
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Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Developmental microbial ecology of the neonatal gastrointestinal tract. (1999) (1317)
- Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen (2011) (1142)
- Occurrence and Diversity of Tetracycline Resistance Genes in Lagoons and Groundwater Underlying Two Swine Production Facilities (2001) (774)
- Fate and transport of antibiotic residues and antibiotic resistance genes following land application of manure waste. (2009) (671)
- Molecular Ecology of Tetracycline Resistance: Development and Validation of Primers for Detection of Tetracycline Resistance Genes Encoding Ribosomal Protection Proteins (2001) (618)
- Molecular ecological analysis of the gastrointestinal microbiota: a review. (2004) (522)
- Evolution and ecology of antibiotic resistance genes. (2007) (456)
- Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics. (2003) (439)
- Biochemical identification and biological origin of key odor components in livestock waste. (1998) (436)
- Methanogenic population dynamics during start-up of anaerobic digesters treating municipal solid waste and biosolids. (1998) (390)
- Anaerobic codigestion of municipal solid waste and biosolids under various mixing conditions--I. Digester performance. (2001) (389)
- Anaerobic codigestion of municipal solid waste and biosolids under various mixing conditions--II: Microbial population dynamics. (2001) (373)
- Monitoring and Source Tracking of Tetracycline Resistance Genes in Lagoons and Groundwater Adjacent to Swine Production Facilities over a 3-Year Period (2007) (295)
- Application of denaturant gradient gel electrophoresis for the analysis of the porcine gastrointestinal microbiota. (1999) (282)
- Dynamics of the bacterial community structure in the rhizosphere of a maize cultivar (2014) (282)
- Bacterial Mechanisms to Overcome Inhibitory Effects of Dietary Tannins (2005) (280)
- Coccidia-induced mucogenesis promotes the onset of necrotic enteritis by supporting Clostridium perfringens growth. (2008) (261)
- Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche (2010) (248)
- Thermostable enzymes as biocatalysts in the biofuel industry. (2010) (247)
- Establishing populations of Megasphaera elsdenii YE 34 and Butyrivibrio fibrisolvens YE 44 in the rumen of cattle fed high grain diets (2003) (245)
- Development, Validation, and Application of PCR Primers for Detection of Tetracycline Efflux Genes of Gram-Negative Bacteria (2002) (243)
- Microbiological and chemical changes in the rumen during the stepwise adaptation of sheep to high concentrate diets (1978) (239)
- Enhanced Butanol Production by Clostridium beijerinckii BA101 Grown in Semidefined P2 Medium Containing 6 Percent Maltodextrin or Glucose (1997) (212)
- Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes (2011) (210)
- Mutualistic Fermentative Digestion in the Gastrointestinal Tract: Diversity and Evolution1 (2002) (209)
- Microbial population dynamics during start‐up and overload conditions of anaerobic digesters treating municipal solid waste and sewage sludge (2004) (205)
- Gut Microbiology and growth-promoting antibiotics in swine (1999) (195)
- The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra) (2015) (194)
- Denaturing Gradient Gel Electrophoresis Analysis of 16S Ribosomal DNA Amplicons To Monitor Changes in Fecal Bacterial Populations of Weaning Pigs after Introduction of Lactobacillus reuteri Strain MM53 (2000) (194)
- Metabolic Activity of Fatty Acid-Oxidizing Bacteria and the Contribution of Acetate, Propionate, Butyrate, and CO2 to Methanogenesis in Cattle Waste at 40 and 60°C (1981) (191)
- Changes in Lactate-Producing and Lactate-Utilizing Bacteria in Relation to pH in the Rumen of Sheep During Stepwise Adaptation to a High-Concentrate Diet (1979) (183)
- Herbivore nutrition in the subtropics and tropics (1984) (165)
- Enumeration of anaerobic bacterial microflora of the equine gastrointestinal tract (1988) (153)
- Mechanisms of microbial hydrogen disposal in the human colon and implications for health and disease. (2010) (151)
- Molecular Ecological Analysis of the Succession and Diversity of Sulfate-Reducing Bacteria in the Mouse Gastrointestinal Tract (2000) (149)
- Tetracycline Residues and Tetracycline Resistance Genes in Groundwater Impacted by Swine Production Facilities (2006) (147)
- Characterization of Fecal Bacterial Populations in Canines: Effects of Age, Breed and Dietary Fiber (2002) (146)
- Functional Potential of Soil Microbial Communities in the Maize Rhizosphere (2014) (146)
- Continuous culture selection of bifidobacteria and lactobacilli from human faecal samples using fructooligosaccharide as selective substrate (1998) (146)
- Selective growth of mucolytic bacteria including Clostridium perfringens in a neonatal piglet model of total parenteral nutrition. (2002) (145)
- Molecular ecological analysis of dietary and antibiotic-induced alterations of the mouse intestinal microbiota. (2001) (145)
- Effect of Condensed Tannins on Bacterial Diversity and Metabolic Activity in the Rat Gastrointestinal Tract (2004) (144)
- Effect of fiber source on short-chain fatty acid production and on the growth and toxin production by Clostridium difficile. (1994) (141)
- Phylogenetic analysis of the fecal microbial community in herbivorous land and marine iguanas of the Galápagos Islands using 16S rRNA-based pyrosequencing (2011) (139)
- Age, introduction of solid feed and weaning are more important determinants of gut bacterial succession in piglets than breed and nursing mother as revealed by a reciprocal cross-fostering model. (2016) (138)
- Changes in N-Transforming Archaea and Bacteria in Soil during the Establishment of Bioenergy Crops (2011) (134)
- Could microbial symbionts of arthropod guts contribute significantly to nitrogen fixation in terrestrial ecosystems? (2002) (133)
- Denaturing gradient gel electrophoresis (2005) (132)
- Ecology of Uncultivated Oscillospira Species in the Rumen of Cattle, Sheep, and Reindeer as Assessed by Microscopy and Molecular Approaches (2003) (132)
- Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes (2014) (131)
- Molecular microbial ecology of the gastrointestinal tract: from phylogeny to function. (2004) (123)
- Recent advances in rumen microbial ecology and metabolism: potential impact on nutrient output. (1990) (118)
- The use of 16S rRNA-targeted oligonucleotide probes to study competition between ruminal fibrolytic bacteria: development of probes for Ruminococcus species and evidence for bacteriocin production (1994) (115)
- Transcriptomic Analyses of Xylan Degradation by Prevotella bryantii and Insights into Energy Acquisition by Xylanolytic Bacteroidetes* (2010) (111)
- Antimicrobial Use and Resistance in Swine Waste Treatment Systems (2006) (108)
- 16S rDNA sequencing of Ruminococcus albus and Ruminococcus flavefaciens: design of a signature probe and its application in adult sheep. (1999) (105)
- Novel Rumen Bacterial Diversity in Two Geographically Separated Sub-Species of Reindeer (2007) (105)
- Pyrosequencing-Based Analysis of the Mucosal Microbiota in Healthy Individuals Reveals Ubiquitous Bacterial Groups and Micro-Heterogeneity (2011) (103)
- Molecular Ecological Analysis of Fecal Bacterial Populations from Term Infants Fed Formula Supplemented with Selected Blends of Prebiotics (2008) (95)
- Diverse hydrogen production and consumption pathways influence methane production in ruminants (2019) (94)
- Microbiological evaluation of the intraruminal in sacculus digestion technique (1986) (94)
- Lipid metabolism in anaerobic ecosystems. (1991) (91)
- The role of gut microbes in satisfying the nutritional demands of adult and juvenile wild, black howler monkeys (Alouatta pigra). (2014) (91)
- Environmental and Public Health Implications of Water Reuse: Antibiotics, Antibiotic Resistant Bacteria, and Antibiotic Resistance Genes (2013) (89)
- Effects of dietary energy level and protein source on nutrient digestion and ruminal nitrogen metabolism in steers. (1991) (89)
- Hydrogen Formation and Its Regulation in Ruminococcus albus: Involvement of an Electron-Bifurcating [FeFe]-Hydrogenase, of a Non-Electron-Bifurcating [FeFe]-Hydrogenase, and of a Putative Hydrogen-Sensing [FeFe]-Hydrogenase (2014) (86)
- Effect of nitrate and its reduction products on the growth and activity of the rumen microbial population (1988) (86)
- Monitoring airborne biotic contaminants in the indoor environment of pig and poultry confinement buildings. (2012) (85)
- Increasing the Oxidative Stress Response Allows Escherichia coli To Overcome Inhibitory Effects of Condensed Tannins (2003) (84)
- Anaerobic digestion of cattle waste at mesophilic and thermophilic temperatures (1995) (83)
- Characterization of two novel saccharolytic, anaerobic thermophiles, Thermoanaerobacterium polysaccharolyticum sp. nov. and Thermoanaerobacterium zeae sp. nov., and emendation of the genus Thermoanaerobacterium. (2001) (81)
- The use of 16S rRNA-targeted oligonucleotide probes to study competition between ruminal fibrolytic bacteria: pure-culture studies with cellulose and alkaline peroxide-treated wheat straw (1994) (80)
- In vitro metabolism of mycotoxins by bacterial, protozoal and ovine ruminal fluid preparations (1989) (78)
- Changes in fecal microbiota of healthy dogs administered amoxicillin. (2010) (76)
- Heterologous gene expression in filamentous fungi. (2012) (76)
- Impact of different bioenergy crops on N-cycling bacterial and archaeal communities in soil. (2013) (75)
- Design and evaluation of a Lactobacillus group-specific ribosomal RNA-targeted hybridization probe and its application to the study of intestinal microecology in pigs. (1998) (71)
- Nitrogen metabolism by ruminal microorganisms: current understanding and future perspectives (1996) (70)
- Ecological drift and local exposures drive enteric bacterial community differences within species of Galápagos iguanas (2012) (69)
- Monitoring the Perturbation of Soil and Groundwater Microbial Communities Due to Pig Production Activities (2013) (69)
- Herbivorous rodents (Neotoma spp.) harbour abundant and active foregut microbiota. (2014) (67)
- Evolution of Salmonella enterica Virulence via Point Mutations in the Fimbrial Adhesin (2012) (66)
- Temporal dynamics of fibrolytic and methanogenic rumen microorganisms during in situ incubation of switchgrass determined by 16S rRNA gene profiling (2014) (66)
- Syntrophic association of a butyrate-degrading bacterium and methanosarcina enriched from bovine rumen fluid (1981) (65)
- Molecular and Biochemical Analyses of CbCel9A/Cel48A, a Highly Secreted Multi-Modular Cellulase by Caldicellulosiruptor bescii during Growth on Crystalline Cellulose (2013) (64)
- Biochemical Analysis of a β-d-Xylosidase and a Bifunctional Xylanase-Ferulic Acid Esterase from a Xylanolytic Gene Cluster in Prevotella ruminicola 23 (2009) (62)
- Molecular Ecology Of Macrolide–Lincosamide–Streptogramin B Methylases in Waste Lagoons and Subsurface Waters Associated with Swine Production (2010) (59)
- Molecular Cloning, Sequencing, and Expression of a Novel Multidomain Mannanase Gene from Thermoanaerobacterium polysaccharolyticum (1999) (58)
- Biochemical and Microbiological Evidence for Fermentative Digestion in Free‐Living Land Iguanas (Conolophus pallidus) and Marine Iguanas (Amblyrhynchus cristatus) on the Galápagos Archipelago (2004) (57)
- Gastrointestinal microbes and host interactions (1997) (57)
- Halomonas sulfidaeris-dominated microbial community inhabits a 1.8 km-deep subsurface Cambrian Sandstone reservoir. (2014) (56)
- Evaluation of Swine-Specific PCR Assays Used for Fecal Source Tracking and Analysis of Molecular Diversity of Swine-Specific “Bacteroidales” Populations (2009) (55)
- Biochemical and Mutational Analyses of a Multidomain Cellulase/Mannanase from Caldicellulosiruptor bescii (2012) (55)
- CARRIAGE OF ANTIBIOTIC-RESISTANT ENTERIC BACTERIA VARIES AMONG SITES IN GALÁPAGOS REPTILES (2012) (55)
- Development of an oligonucleotide probe targeting 16S rRNA and its application for detection and quantitation of the ruminal bacterium Synergistes jonesii in a mixed-population chemostat (1993) (54)
- Biochemical Characterization and Relative Expression Levels of Multiple Carbohydrate Esterases of the Xylanolytic Rumen Bacterium Prevotella ruminicola 23 Grown on an Ester-Enriched Substrate (2011) (52)
- The BaeSR Two-Component Regulatory System Mediates Resistance to Condensed Tannins in Escherichia coli (2007) (52)
- Paenibacillus tundrae sp. nov. and Paenibacillus xylanexedens sp. nov., psychrotolerant, xylan-degrading bacteria from Alaskan tundra. (2009) (52)
- Desulfotomaculum genus- and subgenus-specific 16S rRNA hybridization probes for environmental studies. (2000) (51)
- Molecular ecology and diversity in gut microbial ecosystems. (2000) (50)
- 4.1. Denaturing gradient gel electrophoresis (2005) (50)
- Outer membrane vesicles from Fibrobacter succinogenes S85 contain an array of carbohydrate‐active enzymes with versatile polysaccharide‐degrading capacity (2017) (49)
- Enrichment of specific bacterial and eukaryotic microbes in the rhizosphere of switchgrass (Panicum virgatum L.) through root exudates. (2014) (49)
- T-2 toxin metabolism by ruminal bacteria and its effect on their growth (1987) (49)
- Molecular Basis for the Selectivity and Specificity of Ligand Recognition by the Family 16 Carbohydrate-binding Modules from Thermoanaerobacterium polysaccharolyticum ManA* (2008) (48)
- Volatile fatty acids and anaerobic fermentation in temperate piscivorous and omnivorous freshwater fish (1996) (48)
- Biochemical and Structural Insights into Xylan Utilization by the Thermophilic Bacterium Caldanaerobius polysaccharolyticus* (2012) (48)
- Gut Environment and Evolution of Mutualistic Fermentative Digestion (1997) (47)
- Effects of several mycotoxins on specific growth rate of Butyrivibrio fibrisolvens and toxin degradation in vitro (1987) (47)
- Use of 16S-rRNA Based Techniques to Investigate the Ecological Succession of Microbial Populations in the Immature Lamb Rumen: Tracking of a Specific Strain of Inoculated Ruminococcus and Interactions with Other Microbial Populations in Vivo (1999) (46)
- Effect of weaning diet on the ecology of adherent lactobacilli in the gastrointestinal tract of the pig. (1995) (46)
- Functional Diversity of Four Glycoside Hydrolase Family 3 Enzymes from the Rumen Bacterium Prevotella bryantii B14 (2010) (46)
- Functional Analysis of Multiple Single-stranded DNA-binding Proteins from Methanosarcina acetivorans and Their Effects on DNA Synthesis by DNA Polymerase BI* (2004) (45)
- Analysis of the hydrogenotrophic microbiota of wild and captive black howler monkeys (Alouatta pigra) in palenque national park, Mexico (2011) (45)
- Two New Xylanases with Different Substrate Specificities from the Human Gut Bacterium Bacteroides intestinalis DSM 17393 (2014) (45)
- Acetogenesis and the Rumen: Syntrophic Relationships (1994) (44)
- Gastrointestinal ecosystems and fermentations (1997) (44)
- Untangling the cecal microbiota of feral chickens by culturomic and metagenomic analyses (2017) (44)
- Diversity of anaerobic gut fungal populations analysed using ribosomal ITS1 sequences in faeces of wild and domesticated herbivores. (2010) (44)
- TNF-α Sensitizes HT-29 Colonic Epithelial Cells to Intestinal Lactobacilli1 (2002) (41)
- An in vivo study of ruminal micro-organisms influencing lactate turnover and its contribution to volatile fatty acid production (1984) (40)
- Metabolic networks for nitrogen utilization in Prevotella ruminicola23 (2017) (40)
- Reconstitution of a Thermostable Xylan-Degrading Enzyme Mixture from the Bacterium Caldicellulosiruptor bescii (2012) (40)
- Diversity of Extracellular Proteolytic Activities Among Prevotella Species from the Rumen (1999) (40)
- Bacterial Diversity and Distribution in the Holocene Sediments of a Northern Temperate Lake (2007) (39)
- Enumeration and Isolation of Lactate-Utilizing Bacteria from the Rumen of Sheep (1979) (39)
- Functional Analyses of Multiple Lichenin-Degrading Enzymes from the Rumen Bacterium Ruminococcus albus 8 (2011) (39)
- Enzymatic Hydrolysis of Forage Cell Walls (1993) (39)
- The application of rumen biotechnology to improve the nutritive value of fibrous feedstuffs: Pre- and post-ingestion (1999) (39)
- Repeated ruminal dosing of Ruminococcus spp. does not result in persistence, but changes in other microbial populations occur that can be measured with quantitative 16S-rRNA-based probes. (2001) (38)
- Microbial ecology of the ovine rumen (2002) (38)
- Comparative Analyses of Two Thermophilic Enzymes Exhibiting both β-1,4 Mannosidic and β-1,4 Glucosidic Cleavage Activities from Caldanaerobius polysaccharolyticus (2010) (38)
- Cellulose degradation in the human gut: Ruminococcus champanellensis expands the cellulosome paradigm. (2016) (37)
- Commission on Genetic Resources for Food and Agriculture. Micro-organisms and ruminant digestion: State of knowledge, trends and future prospects (2012) (37)
- 3-Phenylpropanoic Acid Improves the Affinity of Ruminococcus albus for Cellulose in Continuous Culture (1990) (37)
- Flow cytometric sorting, phylogenetic analysis and in situ detection of Oscillospira guillermondii, a large, morphologically conspicuous but uncultured ruminal bacterium. (2003) (36)
- Fecal microbiota of horses in the clinical setting: potential effects of penicillin and general anesthesia. (2010) (36)
- Biochemical Analyses of Multiple Endoxylanases from the Rumen Bacterium Ruminococcus albus 8 and Their Synergistic Activities with Accessory Hemicellulose-Degrading Enzymes (2011) (35)
- A Staphylococcus pro-apoptotic peptide induces acute exacerbation of pulmonary fibrosis (2020) (35)
- Detection and characterization of extracellular proteases in Butyrivibrio fibrisolvens H17c (1986) (35)
- Purification and properties of NADP-dependent glutamate dehydrogenase from Ruminococcus flavefaciens FD-1 (1992) (34)
- Degradation of protein and utilization of the hydrolytic products by a predominant ruminal bacterium, Prevotella ruminicola B1(4). (1997) (34)
- Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber (2020) (33)
- Response of Archaeal Communities in the Rhizosphere of Maize and Soybean to Elevated Atmospheric CO2 Concentrations (2010) (33)
- Degradation of complex arabinoxylans by human colonic Bacteroidetes (2021) (33)
- Effects of defaunation and various nitrogen supplementation regimens on microbial numbers and activity in the rumen of sheep. (1991) (33)
- Molecular and Biochemical Analyses of the GH44 Module of CbMan5B/Cel44A, a Bifunctional Enzyme from the Hyperthermophilic Bacterium Caldicellulosiruptor bescii (2012) (33)
- Digestive Challenges for Vertebrate Animals: Microbial Diversity, Cardiorespiratory Coupling, and Dietary Specialization* (2010) (32)
- Bacteroides intestinalis DSM 17393, a member of the human colonic microbiome, upregulates multiple endoxylanases during growth on xylan (2016) (31)
- Acacia angustissima: Its anti-nutrients constituents, toxicity and possible mechanisms to alleviate the toxicity – a short review (2003) (30)
- Biochemical and Mutational Analysis of Glutamine Synthetase Type III from the Rumen Anaerobe Ruminococcus albus 8 (2005) (30)
- Dietary Fructo-oligosaccharide Modulates Large Intestinal Inflammatory Responses to Clostridium difficile in Antibiotic-compromised Mice (1996) (30)
- Evaluation of toxicity of Acacia angustissima in a rat bioassay (2001) (29)
- Fermentation of stachyose and raffinose by hind‐gut bacteria of the weanling pig (1994) (29)
- Sensitive plate assay for screening and detection of bacterial polyurethanase activity (2001) (27)
- Amino acid utilization by the ruminal bacterium Synergistes jonesii strain 78-1 (1993) (27)
- Description of Caldanaerobius fijiensis gen. nov., sp. nov., an inulin-degrading, ethanol-producing, thermophilic bacterium from a Fijian hot spring sediment, and reclassification of Thermoanaerobacterium polysaccharolyticum and Thermoanaerobacterium zeae as Caldanaerobius polysaccharolyticus comb. (2008) (27)
- Purification and characterization of a thermostable alpha-galactosidase from Thermoanaerobacterium polysaccharolyticum. (2002) (26)
- Gastrointestinal microbiology. Volume 1: Gastrointestinal ecosystems and fermentations. (1996) (26)
- Biochemical and Domain Analyses of FSUAxe6B, a Modular Acetyl Xylan Esterase, Identify a Unique Carbohydrate Binding Module in Fibrobacter succinogenes S85 (2009) (26)
- Effect of insertional mutations in the pueA and pueB genes encoding two polyurethanases in Pseudomonas chlororaphis contained within a gene cluster (2007) (26)
- Occurrence and expression of genes encoding methyl-compound production in rumen bacteria (2019) (26)
- Digesta retention time in the Galápagos tortoise (Chelonoidis nigra). (2011) (24)
- Comparative Microbial Diversity in the Gastrointestinal Tracts of Food Animal Species1 (2002) (24)
- β-Glucanase expression by Ruminococcus flavefaciens FD-1 (1992) (23)
- Molecular Analysis of Archaea, Bacteria and Eucarya Communities in the Rumen - Review - (1999) (23)
- Probiotic Dosing of Ruminococcus flavefaciens Affects Rumen Microbiome Structure and Function in Reindeer (2013) (23)
- Detection of tetracycline resistance genes by PCR methods. (2004) (23)
- Biochemical and Mutational Analyses of a Unique Clamp Loader Complex in the Archaeon Methanosarcina acetivorans* (2005) (22)
- Nitrogen Utilization and Metabolism in Ruminococcus albus 8 (2014) (21)
- Biochemical and Structural Analyses of Two Cryptic Esterases in Bacteroides intestinalis and their Synergistic Activities with Cognate Xylanases. (2017) (21)
- Lignocellulose-derived thin stillage composition and efficient biological treatment with a high-rate hybrid anaerobic bioreactor system (2016) (21)
- Thermophilic methane production from dairy cattle waste (1990) (21)
- Identification of methanogenesis and syntrophy as important microbial metabolic processes for optimal thermophilic anaerobic digestion of energy cane thin stillage (2019) (19)
- Manipulation of nitrogen digestion by sheep using defaunation and various nitrogen supplementation regimens. (1991) (18)
- Molecular methods in microbial ecology. (2005) (18)
- Degradation of wheat straw and alkaline hydrogen peroxide-treated wheat straw by Ruminococcus albus 8 and Ruminococcus flavefaciens FD-1. (1991) (18)
- Domain Analysis of a Modular α-l-Arabinofuranosidase with a Unique Carbohydrate Binding Strategy from the Fiber-Degrading Bacterium Fibrobacter succinogenes S85 (2010) (18)
- Generation of an E. coli platform strain for improved sucrose utilization using adaptive laboratory evolution (2019) (18)
- Combined Genomic, Transcriptomic, Proteomic, and Physiological Characterization of the Growth of Pecoramyces sp. F1 in Monoculture and Co-culture With a Syntrophic Methanogen (2019) (17)
- Orenia metallireducens sp. nov. Strain Z6, a Novel Metal-Reducing Member of the Phylum Firmicutes from the Deep Subsurface (2016) (17)
- Characterization of the gene encoding glutamate dehydrogenase (gdhA) from the ruminal bacterium Ruminococcus flavefaciens FD-1 (2003) (17)
- Ribotyping of adherent Lactobacillus from weaning pigs: a basis for probiotic selection based on diet and gut compartment. (1997) (17)
- Gastrointestinal Detoxification and Digestive Disorders in Ruminant Animals (1997) (17)
- Metagenomic-Based Study of the Phylogenetic and Functional Gene Diversity in Galápagos Land and Marine Iguanas (2015) (16)
- Partial characterization of a DNA restriction endonuclease from Ruminococcus flavefaciens FD-1 and its inhibition by site-specific adenine methylation (1992) (16)
- “Candidatus Paraporphyromonas polyenzymogenes” encodes multi-modular cellulases linked to the type IX secretion system (2018) (16)
- Microbial community analysis of rectal methanogens and sulfate reducing bacteria in two non‐human primate species (2009) (16)
- Evidence that Cellulolysis by an Anaerobic Ruminal Fungus Is Catabolite Regulated by Glucose, Cellobiose, and Soluble Starch (1990) (16)
- Molecular microbial ecology in gut ecosystems (1999) (15)
- Fecal microbiota of calves in the clinical setting: effect of penicillin treatment. (2011) (15)
- Gastrointestinal microbiology. Volume 2: Gastrointestinal microbes and host interactions. (1996) (14)
- Structural and Biochemical Basis for Mannan Utilization by Caldanaerobius polysaccharolyticus Strain ATCC BAA-17* (2014) (14)
- Dietary Supplementation of Usnic Acid, an Antimicrobial Compound in Lichens, Does Not Affect Rumen Bacterial Diversity or Density in Reindeer (2014) (14)
- Partial purification and characterization of Ral8I, a class-IIS restriction endonuclease from Ruminococcus albus 8 which recognizes 5'-GGATC. (1992) (14)
- Fe-oxide grain coatings support bacterial Fe-reducing metabolisms in 1.7−2.0 km-deep subsurface quartz arenite sandstone reservoirs of the Illinois Basin (USA) (2014) (14)
- Transport and intracellular metabolism of major feed compounds by ruminal bacteria: the potential for metabolic manipulation (1994) (14)
- Effects of oleaginous yeast on growth performance, fatty acid composition of muscles, and energy utilization by poultry (1996) (13)
- Dynamic Distribution of Gut Microbiota in Pigs at Different Growth Stages: Composition and Contribution (2022) (13)
- Phylogenetic Evidence for Lateral Gene Transfer in the Intestine of Marine Iguanas (2010) (13)
- Agricultural use of antibiotics and antibiotic resistance (2017) (12)
- 29. Environmental Impacts of Antibiotic Use in the Animal Production Industry (2012) (12)
- Supplementing with Non-Glycoside Hydrolase Proteins Enhances Enzymatic Deconstruction of Plant Biomass (2012) (12)
- Automatic nitrogen-15 analyser for use in biological research. (1986) (12)
- Ameliorating the toxic effects of Acacia angustissima with polyethylene glycol in rats (2003) (12)
- Proteolytic Activities of the Starch-Fermenting Ruminal Bacterium, Streptococcus bovis (1999) (12)
- Microbial digestion of forages in herbivores (1987) (12)
- Molecular analyses of an unusual translesion DNA polymerase from Methanosarcina acetivorans C2A. (2010) (11)
- Genomic fingerprinting and serotyping of Salmonella from Galápagos iguanas demonstrates island differences in strain diversity. (2011) (11)
- The concentration of lactate in relation to other components of bovine mammary secretion during premature regression and after resumption of milking (1977) (11)
- Identification of Halophilic Microbes in Lung Fibrotic Tissue by Oligotyping (2018) (11)
- Mutational Insights into the Roles of Amino Acid Residues in Ligand Binding for Two Closely Related Family 16 Carbohydrate Binding Modules* (2010) (10)
- Microbiology of feed samples incubated in nylon bags in the rumen of sheep (1983) (10)
- Inhibition of lung microbiota-derived proapoptotic peptides ameliorates acute exacerbation of pulmonary fibrosis (2022) (10)
- Structural and functional analyses of a glycoside hydrolase family 5 enzyme with an unexpected β-fucosidase activity. (2011) (10)
- Functional and modular analyses of diverse endoglucanases from Ruminococcus albus 8, a specialist plant cell wall degrading bacterium (2016) (10)
- Biosynthesis of Nitrogen-Containing Compounds (1997) (10)
- Molecular Analyses of a Three-Subunit Euryarchaeal Clamp Loader Complex from Methanosarcina acetivorans (2009) (9)
- Biotype and Ribotype Diversity among Lactobacillus Isolates from the Mouse Ileum (1997) (9)
- Chapter 4 Microbial ecology of the digestive tract in reindeer: seasonal changes (2005) (9)
- Characterization of the microbial community colonizing the anal and vulvar pores of helminths from the hindgut of zebras (1989) (9)
- Mutational and Structural Analyses of Caldanaerobius polysaccharolyticus Man5B Reveal Novel Active Site Residues for Family 5 Glycoside Hydrolases (2013) (9)
- Thermophilic Degradation of Hemicellulose, a Critical Feedstock in the Production of Bioenergy and Other Value-Added Products (2020) (9)
- Purification, Characterization, and Expression of Multiple Glutamine Synthetases from Prevotella ruminicola 23 (2011) (9)
- Genetics of ruminal anaerobic bacteria (1997) (9)
- Hydrogen and formate production and utilisation in the rumen and the human colon (2022) (9)
- Degradation Products of Complex Arabinoxylans by Bacteroides intestinalis Enhance the Host Immune Response (2021) (8)
- Rumen (2020) (8)
- Rumen microbial ecology in reindeer - Adaptations to a unique diet (2004) (8)
- Enzymatic Mechanism for Arabinan Degradation and Transport in the Thermophilic Bacterium Caldanaerobius polysaccharolyticus (2017) (8)
- Salmonella Strains Isolated from Galápagos Iguanas Show Spatial Structuring of Serovar and Genomic Diversity (2012) (8)
- Column chromatography of 2-aminoethylphosphonic acid. (1973) (8)
- Multiple cellobiohydrolases and cellobiose phosphorylases cooperate in the ruminal bacterium Ruminococcus albus 8 to degrade cellooligosaccharides (2016) (7)
- Fermentative Digestion in Herbivorous Lizards : Bacterial Population Analysis in the Intestinal Tract of Free-Living Land (Conolophus pallidus) and Marine Iguanas (Amblyrynchus cristatus) on the Galapagos Archipelago (2009) (7)
- The restriction endonuclease RflFII, isolated from Ruminococcus flavefaciens FD-1, recognizes the sequence 5'-AGTACT-3', and is inhibited by site-specific adenine methylation. (1994) (7)
- The contribution of antibiotic residues and antibiotic resistance genes from livestock operations to antibiotic resistance in the environment and food chain. (2011) (7)
- ADAPTATION OF RUMEN BACTERIA TO SODIUM AND MONENSIN (1984) (7)
- Peptide and amino acid transport in Streptococcus bovis (1990) (6)
- The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra) (2014) (6)
- Electron flow: key to mitigating ruminant methanogenesis. (2022) (6)
- Efficiency of bacterial protein synthesis during anaerobic degradation of cattle waste (1990) (6)
- Bacterial Colonization on Metal Surfaces in Animal Buildings: Implications for Microbial-induced Corrosion (1994) (6)
- Cellulase and xylanase genes from ruminal bacteria: domain analysis suggests a non-cellulosome-like model for organization of the cellulase complex. (1997) (5)
- Assessment of microbial diversity associated with CH4 emission from sugarcane vinasse storage and transportation systems. (2020) (5)
- Let them eat fruit (2018) (5)
- Stepwise adaptation of sheep fed ad libitum to a high concentrate diet and its effect on ruminal pH and lactic concentration (1981) (5)
- Inhibition of the exo-β-1,4-glucanase from Ruminococcus flavefaciens FD-1 by a specific monoclonal antibody (1994) (4)
- Evidence that Cellulolysis by an Anaerobic Ruminal Fungus Is Catabolite Regulated by Glucose, Cellobiose, and Soluble Starch (1991) (4)
- Herbivore nutrition in the subtropics and tropics. Proceedings of the International Symposium on Herbivore Nutrition in the Subtropics and Tropics held from 5-9 April 1983 at the Council for Scientific and Industrial Research Conference Centre, Pretoria, Republic of South Africa. (1984) (4)
- Interspecies Hydrogen Transfer and Its Effects on Global Transcript Abundance in Ruminococcus albus, a Predominant Fiber‐Degrading Species in the Rumen (2016) (4)
- Xylan Deconstruction by Thermophilic Thermoanaerobacterium bryantii Hemicellulases Is Stimulated by Two Oxidoreductases (2022) (4)
- Genome Sequence of a Thermoacidophilic Methanotroph Belonging to the Verrucomicrobiota Phylum from Geothermal Hot Springs in Yellowstone National Park: A Metagenomic Assembly and Reconstruction (2022) (3)
- Animal feed science and techniology: Introduction (2001) (3)
- Improved Method for Isolation of Microbial RNA from Biofuel Feedstock for Metatranscriptomics (2013) (3)
- Ruminal protein breakdown and ammonia assimilation (2020) (3)
- Phenotypic and genotypic characterization of antibiotic-resistant soil and manure bacteria adjacent to swine production facilities (2013) (3)
- High Protein Diet Reduces Food Intake and Adiposity and Alters GI Microbiome (2013) (3)
- Alternative hydrogen uptake pathways suppress methane production in ruminants (2018) (3)
- A Review of Gastrointestinal Microbiology with Special Emphasis on Molecular Microbial Ecology Approaches (2005) (3)
- Complete nucleotide sequence of a cryptic plasmid, pBAW301, from the ruminal anaerobe Ruminococcus flavefaciens R13e2. (1996) (3)
- Novel rumen bacterial isolates from reindeer (Rangifer tarandus tarandus) (2004) (2)
- A LABORATORY STUDY ON METAL CORROSION BY AMMONIA GAS (1999) (2)
- Convergent Evolution of Invasive Serovars of Salmonella Enterica via Point Mutations in the Type 1 Fimbrial Adhesion FimH (2012) (2)
- Hess from Cow Rumen Metagenomic Discovery of Biomass-Degrading Genes and Genomes (2012) (2)
- Inhibition of biomethane production under antibiotics in poultry litter (2020) (2)
- The ruminal metabolism of lactic acid. (1977) (2)
- A STUDY ON THE POTENTIAL OF METAL CORROSION BY SULFATE-REDUCING BACTERIA IN ANIMAL BUILDINGS (1999) (2)
- The Genus Prevotella, A Resource of Enzymes for Hemicellulose Degradation (2010) (2)
- Diversity of fiber-adherent bacteria on three potential bioenergy feedstocks during digestion in the cow rumen (2009) (2)
- 5-Deoxyfl avan-3-ol-based proanthocyanidins with antinutritional and antimicrobial properties from the forage legume Acaciella angustissima (2011) (2)
- Development of a signature probe targeting the 16S-23S rRNA internal transcribed spacer of a ruminal Ruminococcus flavefaciens isolate from reindeer. (2011) (2)
- Variations in the 16S-23S rRNA internal transcribed spacer of fibrolytic Butyrivibrio isolates from the reindeer rumen. (2011) (2)
- Use of surface analysis techniques to determine the mechanisms of metal corrosion in animal buildings (1997) (2)
- Methanogenesis and sulfate reduction in timber and drainage water from a gold mine (1989) (2)
- Restoration of soil organic carbon with cultivation of perennial biofuel crops (2009) (1)
- Prokaryote Diversity of Epithelial Mucosal Biofilms in the Human Digestive Tract (2007) (1)
- Probiotics and prebiotics: scientific aspects (2005) (1)
- Improving rumen function (2020) (1)
- The use of oligonucleotide probes to study the ecology of ruminal microbial populations (1996) (1)
- Biochemical analyses of multiple endoxylanases from the (2011) (1)
- Terrestrial Vertebrate Animal Metagenomics: Herbivorous Reptiles (2014) (1)
- Bioenergetic targets for controlling growth of rumen bacteria; insights into the molecular mode of action of monensin (2017) (0)
- Systems analysis of the effect of hydrogen sulfide on the growth of Methylococcus capsulatus Bath (2022) (0)
- Bacterium Caldicellulosiruptor bescii Xylan-Degrading Enzyme Mixture from the Reconstitution of a Thermostable (2014) (0)
- Occurrence and expression of genes encoding methyl-compound production in rumen bacteria (2019) (0)
- Discovery of substrate-targeted enzymes for the degradation of biomass by Metatranscriptomics (2009) (0)
- Biotransformation of anti-nutritional factors by rumen microbiota (1998) (0)
- METHODS IN GUT MICROBIAL ECOLOGY FOR RUMINANTS Methods in Gut Microbial Ecology for Ruminants (2013) (0)
- Biofilm formation and growth dynamics of Prevotella ruminicola during the colonisation of fresh perennial ryegrass (2010) (0)
- Metabolic networks for nitrogen utilization in Prevotella ruminicola23 (2017) (0)
- Evidence thatCellulolysis byan Anaerobic Ruminal FungusIs Catabolite Regulated byGlucose, Cellobiose, andSoluble Starch (1990) (0)
- Effects ofSeveral Mycotoxins on Specific GrowthRateof Butyrivibrio fibrisolvens andToxinDegradation InVitro (1987) (0)
- Microbial diversity in gut ecosystems (1997) (0)
- Probiotic Dosing of Ruminococcus flavefaciens Affects Rumen Microbiome Structure and Function in Reindeer (2013) (0)
- Hydrogen and formate production and utilisation in the rumen and the human colon (2022) (0)
- Preface (2006) (0)
- Transcriptional analyses of carbohydrate metabolism in Prevotella ruminicola (2009) (0)
- 207 Polyclonal Antibodies Inhibit Growth of Key Cellulolytic Rumen Bacterial Species (2022) (0)
- E COMMISSION ON GENETIC RESOURCES FOR FOOD AND AGRICULTURE MICRO-ORGANISMS AND RUMINANT DIGESTION : STATE OF KNOWLEDGE , TRENDS AND FUTURE PROSPECTS (2012) (0)
- Tolerance of prebiotic supplemented infant formula and impact on composition of fecal microbiota (2007) (0)
- Inhibition of lung microbiota-derived proapoptotic peptides ameliorates acute exacerbation of pulmonary fibrosis (2022) (0)
- Physiological and Ecological Adaptations to Feeding in Vertebrates. Edited by J Matthias Starck and , Tobias Wang. Enfield (New Hampshire): Science Publishers. $114.00. viii + 425 p; ill.; index. ISBN: 1–57808–246–3. 2005. (2006) (0)
- Book Review:Quantitative Aspects of Ruminant Digestion and Metabolism. J. M. Forbes, J. France (1995) (0)
- Supplementary Material for: Lignocellulose-derived thin stillage composition and efficient biological treatment with a high-rate hybrid anaerobic bioreactor system (2016) (0)
- Efficiency of Bacterial Protein Synthesis and Methanogenesis During Anaerobic Degradation (1990) (0)
- Dietary Supplementation of Usnic Acid, an Antimicrobial Compound in Lichens, Does Not Affect Rumen Bacterial Diversity or Density in Reindeer (2014) (0)
- Characterization oftheMicrobial Community Colonizing theAnal andVulvar PoresofHelminths fromtheHindgut ofZebras (1989) (0)
- 1 Molecular Methods in Microbial Ecology (2005) (0)
- STEPVfISE ADAPTATION OF SHEEP FED AD LIBITUM TO A HIGH CONCENTRATE DIET AND ITS EFFECT ON RUMINAL pH AND LACTIC ACID CONCENTRATION (2010) (0)
- Metagenomic-Based Study of the Phylogenetic and Functional Gene Diversity in Galápagos Land and Marine Iguanas (2014) (0)
- A Staphylococcus pro-apoptotic peptide induces acute exacerbation of pulmonary fibrosis (2020) (0)
- Transcriptional responses of Prevotella ruminicola reflect spatial and temporal differences in available nutrients from fresh perennial ryegrass (2010) (0)
- Rumen bacteria in sheep fed supplemented teff hay (1983) (0)
- “Candidatus Paraporphyromonas polyenzymogenes” encodes multi-modular cellulases linked to the type IX secretion system (2018) (0)
- 12 Acetogenesis and the Rumen : Syntrophic Relationships (0)
- Animal Biotechnology: Preface (2006) (0)
- Structure and Function of a Novel Bi‐Functional Xylanase‐Esterase (2010) (0)
- Bacint_04212 ferulic acid esterase (2017) (0)
- Diverse hydrogen production and consumption pathways influence methane production in ruminants (2019) (0)
- Cloning and sequencing of a NADP-dependent glutamate dehydrogenase from the cellulolytic ruminal bacterium Ruminococcus flavefaciens FD-1. (1995) (0)
- Identification and Phenotypic Evaluation of Microbes Isolated from Breast and Formula-fed Infants Delivered Either Vaginally or by Cesarean Section (P11-075-19). (2019) (0)
- Let them eat fruit (2018) (0)
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