Rosalind J. Allen
#125,871
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Soft matter physicist
Rosalind J. Allen's AcademicInfluence.com Rankings
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Physics
Why Is Rosalind J. Allen Influential?
(Suggest an Edit or Addition)According to Wikipedia, Rosalind Jane Allen is a soft matter physicist and Professor of Theoretical Microbial Ecology at the Biological Physics at the Friedrich-Schiller University of Jena, Germany, and Professor of Biological Physics at the University of Edinburgh, Scotland She is a member of the centre for synthetic biology and systems biology where her research investigates the organisation of microbe populations.
Rosalind J. Allen's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Challenges in microbial ecology: building predictive understanding of community function and dynamics (2016) (532)
- Sampling rare switching events in biochemical networks. (2004) (383)
- Forward flux sampling for rare event simulations (2009) (339)
- Simulating rare events in equilibrium or nonequilibrium stochastic systems. (2005) (290)
- Continuum theory of phase separation kinetics for active Brownian particles. (2013) (256)
- Role of Multicellular Aggregates in Biofilm Formation (2016) (233)
- Scalar φ4 field theory for active-particle phase separation (2013) (225)
- Phase behaviour of active Brownian particles: the role of dimensionality. (2013) (218)
- Forward flux sampling-type schemes for simulating rare events: efficiency analysis. (2006) (188)
- Electric field-controlled water permeation coupled to ion transport through a nanopore. (2003) (127)
- Intermittent permeation of cylindrical nanopores by water. (2002) (105)
- Computing stationary distributions in equilibrium and nonequilibrium systems with forward flux sampling. (2007) (100)
- Electrostatic potential inside ionic solutions confined by dielectrics: a variational approach (2001) (97)
- Mutational pathway determines whether drug gradients accelerate evolution of drug-resistant cells. (2012) (96)
- Effects of macromolecular crowding on genetic networks. (2011) (96)
- Community history affects the predictability of microbial ecosystem development (2013) (87)
- The role of mechanical forces in the planar-to-bulk transition in growing Escherichia coli microcolonies (2014) (82)
- Molecular dynamics investigation of water permeation through nanopores (2003) (81)
- Bacterial growth: a statistical physicist’s guide (2018) (74)
- Growth‐dependent bacterial susceptibility to ribosome‐targeting antibiotics (2014) (70)
- Switching and growth for microbial populations in catastrophic responsive environments. (2009) (68)
- Shaping the Growth Behaviour of Biofilms Initiated from Bacterial Aggregates (2015) (66)
- Oxic-anoxic regime shifts mediated by feedbacks between biogeochemical processes and microbial community dynamics (2017) (62)
- The Pseudomonas aeruginosa PSL Polysaccharide Is a Social but Noncheatable Trait in Biofilms (2016) (55)
- Mixed population of competing totally asymmetric simple exclusion processes with a shared reservoir of particles. (2012) (51)
- Reaction coordinates for the flipping of genetic switches. (2007) (50)
- Homogeneous nucleation under shear in a two-dimensional Ising model: cluster growth, coalescence, and breakup. (2008) (49)
- Competition for space during bacterial colonization of a surface (2015) (48)
- Growth-dependent bacterial susceptibility to ribosome-targeting antibiotics (2014) (46)
- Eliminating fast reactions in stochastic simulations of biochemical networks: a bistable genetic switch. (2007) (41)
- DNA looping provides stability and robustness to the bacteriophage λ switch (2009) (40)
- C12E2 Reverse Micelle: A Molecular Dynamics Study (2000) (38)
- Competition between primary nucleation and autocatalysis in amyloid fibril self-assembly. (2015) (37)
- Non-stationary forward flux sampling. (2012) (37)
- Inherent variability in the kinetics of autocatalytic protein self-assembly. (2014) (37)
- Predictable properties of fitness landscapes induced by adaptational tradeoffs (2020) (35)
- Mechanistic and environmental control of the prevalence and lifetime of amyloid oligomers (2013) (34)
- Complexation and Phase Behavior of Oppositely Charged Polyelectrolyte/Macroion Systems (2004) (34)
- A multipurpose modular system for high-resolution microscopy at high hydrostatic pressure. (2009) (30)
- Lower glycolysis carries a higher flux than any biochemically possible alternative (2014) (29)
- Assembly of microbial communities in replicate nutrient‐cycling model ecosystems follows divergent trajectories, leading to alternate stable states (2017) (28)
- Genes Required for Growth at High Hydrostatic Pressure in Escherichia coli K-12 Identified by Genome-Wide Screening (2013) (25)
- Steady-state parameter sensitivity in stochastic modeling via trajectory reweighting. (2012) (25)
- A kinetic study of ovalbumin fibril formation: the importance of fragmentation and end-joining. (2015) (24)
- Exact solution of a model DNA-inversion genetic switch with orientational control. (2008) (23)
- Computing the local pressure in molecular dynamics simulations (2011) (23)
- Predicting the dynamics of bacterial growth inhibition by ribosome-targeting antibiotics (2017) (22)
- Automatic, optimized interface placement in forward flux sampling simulations. (2013) (21)
- Antibiotic resistance: a physicist’s view (2016) (20)
- Stability of β-lactam antibiotics in bacterial growth media (2020) (19)
- Malliavin weight sampling for computing sensitivity coefficients in Brownian dynamics simulations. (2012) (18)
- Density functional approach to the effective interaction between charges within dielectric cavities (2002) (17)
- Electrostatic interactions of charges and dipoles near a polarizable membrane (2003) (16)
- Dynamical phase transition in a model for evolution with migration. (2010) (15)
- DNA looping provides stability and robustness to the bacteriophage lambda switch (vol 106, pg 8101, 2009) (2009) (15)
- Speed of Invasion of an Expanding Population by a Horizontally Transmitted Trait (2013) (15)
- Oscillating microbial dynamics driven by small populations, limited nutrient supply and high death rates. (2012) (14)
- Parasites on parasites: Coupled fluctuations in stacked contact processes (2012) (14)
- A Roadblock-and-Kill Mechanism of Action Model for the DNA-Targeting Antibiotic Ciprofloxacin (2020) (14)
- Kinetic models of ion transport through a nanopore. (2004) (14)
- Redox regime shifts in microbially mediated biogeochemical cycles (2015) (13)
- Non-equilibrium dynamics of an active colloidal "chucker". (2010) (13)
- Statistical physics of a model binary genetic switch with linear feedback. (2008) (12)
- Resource spectrum engineering by specialist species can shift the specialist-generalist balance (2019) (12)
- Computational design of probes to detect bacterial genomes by multivalent binding (2020) (11)
- Single-molecule imaging at high hydrostatic pressure (2013) (11)
- Osmosis in a minimal model system. (2012) (11)
- Phase behaviour of oppositely charged polymer/surfactant mixtures (2003) (11)
- Mixed population of competing TASEPs with a shared reservoir of particles (2011) (10)
- Calcium Sensitive Fluorescent Dyes Fluo-4 and Fura Red under Pressure: Behaviour of Fluorescence and Buffer Properties under Hydrostatic Pressures up to 200 MPa (2016) (10)
- Malliavin Weight Sampling: A Practical Guide (2013) (10)
- Permeation of nanopores by water: the effects of channel polarization (2003) (9)
- Osmosis with active solutes (2014) (8)
- Scalar phi(4) field theory for active-particle phase separation (2016) (7)
- Trajectory reweighting for non-equilibrium steady states (2018) (6)
- Tracking the stochastic growth of bacterial populations in microfluidic droplets (2022) (6)
- Growth-dependent drug susceptibility can prevent or enhance spatial expansion of a bacterial population (2019) (6)
- Nucleation in a Sheared Ising Model : Effects of External Field(Non Equilibrium Soft Matter) (2008) (6)
- Shaping the Growth Behaviour of Bacterial Aggregates in Biofilms (2015) (6)
- Pinning transition in biofilm structure driven by active layer dynamics (2022) (5)
- A roadblock-and-kill model explains the dynamical response to the DNA-targeting antibiotic ciprofloxacin (2019) (5)
- Sedimentation equilibria of colloidal hard rod dispersions (1999) (4)
- Phenotypic delay in the evolution of bacterial antibiotic resistance: Mechanistic models and their implications (2019) (3)
- Noise-driven oscillations in microbial population dynamics (2011) (3)
- A model for quorum-sensing mediated stochastic biofilm nucleation (2022) (2)
- Publisher’s Note: “Eliminating fast reactions in stochastic simulations of biochemical networks: A bistable genetic switch” [J. Chem. Phys. 128, 045105 (2008)] (2008) (2)
- Non-equilibrium dynamics of an active colloidal (2010) (1)
- Dynamic Diatom-Bacteria Consortia in Synthetic Plankton Communities (2022) (1)
- High-Throughput Monitoring of Bacterial Growth at Elevated Hydrostatic Pressure on the FLUOstar OPTIMA (2009) (1)
- Phenotypic delay: mechanistic models and their implications for the evolution of resistance to antibiotics (2019) (1)
- A simulation study of aggregation mediated by production of cohesive molecules. (2019) (1)
- Forward flux sampling-type schemes for simulating rare events: Efficiency analysis (2006) (1)
- Degradation of beta-lactams in bacterial growth media (2020) (0)
- A sluggish random walk with subdiffusive spread (2023) (0)
- Nutrient cycling Microbial Ecosystems: Assembly, Function and Targeted Design (2017) (0)
- Computing sensitivity coefficients in Brownian dynamics simulations by Malliavin weight sampling (2012) (0)
- Active layer dynamics drives a transition to biofilm fingering (2023) (0)
- The Pseudomonas aeruginosa polysaccharide PSL is a social but non-cheatable trait in biofilms (2016) (0)
- Response of a Microbial Iron Cycling Ecosystem From a Glacial Meltwater Stream to Perturbations in Organic Matter Availibility. (2014) (0)
- The 3-D spatial structure of multicellular aggregates can give them a competition-dependent growth advantage in early biofilm development (2016) (0)
- Counting individual bacteria during high-throughput growth in microfluidic droplets (2021) (0)
- A Kinetic Study of Ovalbumin Fibril Formation (2016) (0)
- Density Dependent Cohesion Leads to Controlled Phase Separation in Brownian Suspensions (2017) (0)
- Urine production rate is critical in a model for catheter-associated urinary tract infection (2022) (0)
- Correction: Shaping the Growth Behaviour of Biofilms Initiated from Bacterial Aggregates (2016) (0)
- Acknowledgment of Reviewers, 2017 (2017) (0)
- Amplification Free Detection of SARS-CoV-2 Using Multi-Valent Binding (2022) (0)
- Resource spectrum engineering by specialist species can shift the specialist-generalist balance (2019) (0)
- Oxic-anoxic regime shifts mediated by feedbacks between biogeochemical processes and microbial community dynamics (2017) (0)
- Data accompanying "Shaping the Growth Behaviour of Biofilms Initiated from Bacterial Aggregates, 2013-2016" (Submitted paper). (2016) (0)
- Annual meeting of the German Physical Society ( Solid State Physics ) (2008) (0)
- The Density of Competitors in a Stratified Environment Determines the Relative Fitness of Biofilm Structures (2015) (0)
- Sudden transitions in microbial nutrient-cycling ecosystems (2013) (0)
- Controlled phase separation via density-dependent attractive forces (2018) (0)
- Distinct types of multicellular aggregates in Pseudomonas aeruginosa liquid cultures (2022) (0)
- Interplay between mutational pathway and spatial drug distribution controls time to evolution of drug resistance (2012) (0)
- Interplay between mutational pathway and drug gradient controls time to evolution of drug resistance (2012) (0)
- Environmental spatial structure and competition determine the relative fitness of a multicellular aggregate in a young bacterial biofilm (2015) (0)
- Utility and experimental testability of the Gaia hypothesis (2008) (0)
- Acknowledgment to reviewers—2017 (2017) (0)
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