Satoru Miyano
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Japanese bioinformatician
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Computer Science Biology
Satoru Miyano's Degrees
- PhD Bioinformatics University of Tokyo
- Masters Computer Science University of Tokyo
- Bachelors Computer Science University of Tokyo
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Why Is Satoru Miyano Influential?
(Suggest an Edit or Addition)According to Wikipedia, is a professor and the director of the M&D Data Science Center at Tokyo Medical and Dental University. He was awarded fellowship of the International Society for Computational Biology in 2013 for outstanding contributions to the fields of computational biology and bioinformatics.
Satoru Miyano's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Open source clustering software. (2004) (2859)
- International network of cancer genome projects (2010) (1839)
- Frequent pathway mutations of splicing machinery in myelodysplasia (2011) (1799)
- Landscape of genetic lesions in 944 patients with myelodysplastic syndromes (2013) (1219)
- Long noncoding RNA HOTAIR regulates polycomb-dependent chromatin modification and is associated with poor prognosis in colorectal cancers. (2011) (1193)
- Integrated molecular analysis of clear-cell renal cell carcinoma (2013) (909)
- Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators (2012) (777)
- Identification of Genetic Networks from a Small Number of Gene Expression Patterns Under the Boolean Network Model (1998) (776)
- Extensive feature detection of N-terminal protein sorting signals (2002) (717)
- Mutational landscape and clonal architecture in grade II and III gliomas (2015) (676)
- Identification of genes upregulated in ALK-positive and EGFR/KRAS/ALK-negative lung adenocarcinomas. (2012) (634)
- Integrated molecular analysis of adult T cell leukemia/lymphoma (2015) (600)
- Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer (2016) (528)
- Somatic RHOA mutation in angioimmunoblastic T cell lymphoma (2014) (508)
- Aberrant PD-L1 expression through 3′-UTR disruption in multiple cancers (2016) (489)
- Mapping the human genetic architecture of COVID-19 (2021) (455)
- Inferring qualitative relations in genetic networks and metabolic pathways (2000) (405)
- Patterns of somatic structural variation in human cancer genomes (2020) (377)
- Patterns of somatic structural variation in human cancer genomes (2020) (377)
- Age-related remodelling of oesophageal epithelia by mutated cancer drivers (2019) (372)
- Estimation of Genetic Networks and Functional Structures Between Genes by Using Bayesian Networks and Nonparametric Regression (2001) (337)
- Recurrent mutations in multiple components of the cohesin complex in myeloid neoplasms (2012) (325)
- Inferring gene networks from time series microarray data using dynamic Bayesian networks (2003) (323)
- Dynamics of clonal evolution in myelodysplastic syndromes (2016) (311)
- Inherited and Somatic Defects in DDX41 in Myeloid Neoplasms. (2015) (299)
- The landscape of somatic mutations in Down syndrome–related myeloid disorders (2013) (295)
- Biopathways representation and simulation on hybrid functional Petri net (2003) (273)
- Identification of novel adrenomedullin in mammals: a potent cardiovascular and renal regulator (2004) (253)
- Somatic Mutations and Clonal Hematopoiesis in Aplastic Anemia. (2015) (253)
- Genomic Landscape of Esophageal Squamous Cell Carcinoma in a Japanese Population. (2016) (244)
- Acquired initiating mutations in early hematopoietic cells of CLL patients. (2014) (230)
- Inferring Gene Regulatory Networks from Time-Ordered Gene Expression Data of Bacillus Subtilis Using Differential Equations (2002) (229)
- Genetic abnormalities in myelodysplasia and secondary acute myeloid leukemia: impact on outcome of stem cell transplantation. (2017) (226)
- Somatic SETBP1 mutations in myeloid malignancies (2013) (225)
- Analyses of non-coding somatic drivers in 2,658 cancer whole genomes (2020) (220)
- Genomic characterization of biliary tract cancers identifies driver genes and predisposing mutations. (2018) (216)
- Plastin3 is a novel marker for circulating tumor cells undergoing the epithelial-mesenchymal transition and is associated with colorectal cancer prognosis. (2013) (213)
- Comprehensive analysis of genetic alterations and their prognostic impacts in adult acute myeloid leukemia patients (2014) (205)
- Alternating Finite Automata on omega-Words (1984) (203)
- Estimating gene networks from gene expression data by combining Bayesian network model with promoter element detection (2003) (202)
- Exome sequencing identifies secondary mutations of SETBP1 and JAK3 in juvenile myelomonocytic leukemia (2013) (201)
- Comprehensive molecular characterization of mitochondrial genomes in human cancers (2017) (197)
- ACTN1 mutations cause congenital macrothrombocytopenia. (2013) (190)
- A Top-r Feature Selection Algorithm for Microarray Gene Expression Data (2012) (189)
- Prediction of Transcriptional Terminators in Bacillus subtilis and Related Species (2005) (187)
- Dynamic Bayesian Network and Nonparametric Regression for Nonlinear Modeling of Gene Networks from Time Series Gene Expression Data (2003) (186)
- BCOR and BCORL1 mutations in myelodysplastic syndromes and related disorders. (2013) (184)
- Aberrant splicing of U12-type introns is the hallmark of ZRSR2 mutant myelodysplastic syndrome (2014) (184)
- Global implementation of genomic medicine: We are not alone (2015) (183)
- Prognostic relevance of genetic alterations in diffuse lower-grade gliomas (2018) (183)
- Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition (2020) (180)
- Algorithms for identifying Boolean networks and related biological networks based on matrix multiplication and fingerprint function (2000) (172)
- Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity (2015) (172)
- An empirical Bayesian framework for somatic mutation detection from cancer genome sequencing data (2013) (170)
- Recurrent somatic mutations underlie corticotropin-independent Cushing’s syndrome (2014) (170)
- Modeling gene expression regulatory networks with the sparse vector autoregressive model (2007) (168)
- Bayesian network and nonparametric heteroscedastic regression for nonlinear modeling of genetic network (2003) (167)
- Profiling of somatic mutations in acute myeloid leukemia with FLT3-ITD at diagnosis and relapse. (2015) (166)
- Combining microarrays and biological knowledge for estimating gene networks via Bayesian networks (2003) (152)
- Integrated genetic and epigenetic analysis defines novel molecular subgroups in rhabdomyosarcoma (2015) (148)
- Variant ALDH2 is associated with accelerated progression of bone marrow failure in Japanese Fanconi anemia patients. (2013) (148)
- Finding Optimal Models for Small Gene Networks (2003) (146)
- The Tumor-Suppressive miR-497-195 Cluster Targets Multiple Cell-Cycle Regulators in Hepatocellular Carcinoma (2013) (143)
- Identification of gene regulatory networks by strategic gene disruptions and gene overexpressions (1998) (134)
- Integrated Multiregional Analysis Proposing a New Model of Colorectal Cancer Evolution (2016) (130)
- Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer (2020) (128)
- Epidermal Growth Factor Receptor Tyrosine Kinase Defines Critical Prognostic Genes of Stage I Lung Adenocarcinoma (2012) (126)
- Molecular heterogeneity in peripheral T-cell lymphoma, not otherwise specified revealed by comprehensive genetic profiling (2019) (124)
- A novel cell-cycle-indicator, mVenus-p27K−, identifies quiescent cells and visualizes G0–G1 transition (2014) (122)
- Circulating exosomal microRNA-203 is associated with metastasis possibly via inducing tumor-associated macrophages in colorectal cancer (2017) (121)
- Aberrant splicing and defective mRNA production induced by somatic spliceosome mutations in myelodysplasia (2018) (115)
- Combining Microarrays and Biological Knowledge for Estimating Gene Networks via Bayesian Networks (2004) (114)
- Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing (2010) (114)
- A Simple Model-Based Approach to Inferring and Visualizing Cancer Mutation Signatures (2015) (113)
- Finding Optimal Bayesian Network Given a Super-Structure (2008) (113)
- Frequent mutations that converge on the NFKBIZ pathway in ulcerative colitis (2019) (112)
- Clonal evolution in myelodysplastic syndromes (2017) (111)
- Genomic Object Net: I. A platform for modelling and simulating biopathways. (2003) (110)
- Defective Epstein–Barr virus in chronic active infection and haematological malignancy (2019) (110)
- Algorithms for inferring qualitative models of biological networks. (1999) (107)
- Mutations in the gene encoding the E2 conjugating enzyme UBE2T cause Fanconi anemia. (2015) (107)
- Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models (2008) (106)
- Deep sequencing reveals stepwise mutation acquisition in paroxysmal nocturnal hemoglobinuria. (2014) (104)
- Prognostic relevance of integrated genetic profiling in adult T-cell leukemia/lymphoma. (2015) (103)
- Using Protein-Protein Interactions for Refining Gene Networks Estimated from Microarray Data by Bayesian Networks (2003) (100)
- Cell Illustrator 4.0: A Computational Platform for Systems Biology (2010) (99)
- Dynamic Bayesian network and nonparametric regression for nonlinear modeling of gene networks from time series gene expression data. (2004) (98)
- Quantitative characterization of T-cell repertoire in allogeneic hematopoietic stem cell transplant recipients (2015) (96)
- Molecular features of triple negative breast cancer cells by genome-wide gene expression profiling analysis. (2013) (95)
- Information Technologies in Biomedicine (2008) (91)
- Recurrent SPI1 (PU.1) fusions in high-risk pediatric T cell acute lymphoblastic leukemia (2017) (90)
- Genomic landscape of liposarcoma (2015) (89)
- Knowledge Acquisition from Amino Acid Sequences by Machine Learning System BONSAI (1992) (89)
- Variegated RHOA mutations in adult T-cell leukemia/lymphoma. (2016) (88)
- Comprehensive mutational analysis of primary and relapse acute promyelocytic leukemia (2016) (88)
- Identification of genetic networks by strategic gene disruptions and gene overexpressions under a boolean model (2003) (88)
- Frequent structural variations involving programmed death ligands in Epstein-Barr virus-associated lymphomas (2019) (84)
- Loss of function mutations in RPL27 and RPS27 identified by whole‐exome sequencing in Diamond‐Blackfan anaemia (2015) (81)
- Abnormal hematopoiesis and autoimmunity in human subjects with germline IKZF1 mutations (2017) (80)
- Haploinsufficiency of TNFAIP3 (A20) by germline mutation is involved in autoimmune lymphoproliferative syndrome (2017) (80)
- Null space based feature selection method for gene expression data (2012) (77)
- A versatile petri net based architecture for modeling and simulation of complex biological processes. (2004) (77)
- Association between single-nucleotide polymorphisms in selectin genes and immunoglobulin A nephropathy. (2002) (77)
- Inhibition of histone demethylase JMJD1A improves anti-angiogenic therapy and reduces tumor-associated macrophages. (2013) (76)
- Mutational Landscape of Pediatric Acute Lymphoblastic Leukemia. (2017) (76)
- Statistical analysis of a small set of time-ordered gene expression data using linear splines (2002) (75)
- Antigen delivery targeted to tumor-associated macrophages overcomes tumor immune resistance (2019) (75)
- Gene network inference and visualization tools for biologists: application to new human transcriptome datasets (2011) (75)
- Unique mutation portraits and frequent COL2A1 gene alteration in chondrosarcoma (2014) (75)
- Whole genome sequencing discriminates hepatocellular carcinoma with intrahepatic metastasis from multi-centric tumors. (2017) (74)
- Constructing biological pathway models with hybrid functional petri nets. (2011) (73)
- CLINICAL AND BIOLOGICAL IMPLICATIONS OF ANCESTRAL AND NON-ANCESTRAL IDH1 AND IDH2 MUTATIONS IN MYELOID NEOPLASMS (2015) (73)
- Phosphatase and tensin homolog (PTEN) mutation can cause activated phosphatidylinositol 3-kinase δ syndrome-like immunodeficiency. (2016) (73)
- Inferring Gene Regulatory Networks from Time-Ordered Gene Expression Data Using Differential Equations (2002) (73)
- A temporal shift of the evolutionary principle shaping intratumor heterogeneity in colorectal cancer (2018) (72)
- Modelling and simulation of signal transductions in an apoptosis pathway by using timed Petri nets (2007) (71)
- Principal component analysis using QR decomposition (2013) (71)
- Integrated Analysis of Whole Genome and Transcriptome Sequencing Reveals Diverse Transcriptomic Aberrations Driven by Somatic Genomic Changes in Liver Cancers (2014) (70)
- Expression and clinical significance of genes frequently mutated in small cell lung cancers defined by whole exome/RNA sequencing. (2015) (69)
- Circulating Tumor DNA Analysis for Liver Cancers and Its Usefulness as a Liquid Biopsy (2015) (69)
- Recursive regularization for inferring gene networks from time-course gene expression profiles (2009) (68)
- A neural network method for identification of RNA-interacting residues in protein. (2004) (67)
- Integrated molecular profiling of juvenile myelomonocytic leukemia. (2018) (67)
- Association of single-nucleotide polymorphisms in the polymeric immunoglobulin receptor gene with immunoglobulin A nephropathy (IgAN) in Japanese patients (2003) (66)
- Ordering of mutations in acute myeloid leukemia with partial tandem duplication of MLL (MLL-PTD) (2016) (65)
- A feature selection method using improved regularized linear discriminant analysis (2014) (64)
- Biallelic DICER1 mutations in sporadic pleuropulmonary blastoma. (2014) (63)
- Comprehensive phosphoproteome analysis unravels the core signaling network that initiates the earliest synapse pathology in preclinical Alzheimer's disease brain. (2015) (63)
- Predicting the Operon Structure of Bacillus subtilis Using Operon Length, Intergene Distance, and Gene Expression Information (2003) (62)
- Landscape and function of multiple mutations within individual oncogenes (2020) (62)
- Advances in Bioinformatics and Computational Biology, 5th Brazilian Symposium on Bioinformatics, BSB 2010, Rio de Janeiro, Brazil, August 31-September 3, 2010. Proceedings (2010) (60)
- Targeting BIG3–PHB2 interaction to overcome tamoxifen resistance in breast cancer cells (2013) (60)
- Use of gene networks from full genome microarray libraries to identify functionally relevant drug-affected genes and gene regulation cascades. (2003) (60)
- Quantitative T cell repertoire analysis by deep cDNA sequencing of T cell receptor α and β chains using next-generation sequencing (NGS) (2014) (60)
- Whole‐exome sequencing reveals the spectrum of gene mutations and the clonal evolution patterns in paediatric acute myeloid leukaemia (2016) (58)
- Simulation-based model checking approach to cell fate specification during Caenorhabditis elegans vulval development by hybrid functional Petri net with extension (2009) (58)
- Addiction to the IGF2-ID1-IGF2 circuit for maintenance of the breast cancer stem-like cells (2016) (56)
- Gene expression and risk of leukemic transformation in myelodysplasia. (2017) (56)
- Integrated Molecular Profiling of Human Gastric Cancer Identifies DDR2 as a Potential Regulator of Peritoneal Dissemination (2016) (56)
- Extension and verification of the SEIR model on the 2009 influenza A (H1N1) pandemic in Japan. (2013) (55)
- Identification of cell-type-specific mutations in nodal T-cell lymphomas (2017) (55)
- Parallel Algorithm for Learning Optimal Bayesian Network Structure (2011) (55)
- Two Aldehyde Clearance Systems Are Essential to Prevent Lethal Formaldehyde Accumulation in Mice and Humans (2020) (55)
- Clinical utility of next-generation sequencing for inherited bone marrow failure syndromes (2017) (55)
- Somatic mutations in plasma cell-free DNA are diagnostic markers for esophageal squamous cell carcinoma recurrence (2016) (54)
- Characterization of HBV integration patterns and timing in liver cancer and HBV-infected livers (2018) (53)
- Novel recurrent mutations in the RAS-like GTP-binding gene RIT1 in myeloid malignancies (2012) (53)
- Finding module-based gene networks with state-space models - Mining high-dimensional and short time-course gene expression data (2007) (53)
- GATA2 and secondary mutations in familial myelodysplastic syndromes and pediatric myeloid malignancies (2015) (53)
- Petri Net Based Descriptions for Systematic Understanding of Biological Pathways (2006) (52)
- Estimating Genome-Wide Gene Networks Using Nonparametric Bayesian Network Models on Massively Parallel Computers (2011) (51)
- Gain-of-function IKBKB mutation causes human combined immune deficiency (2018) (49)
- The AURKA/TPX2 axis drives colon tumorigenesis cooperatively with MYC. (2015) (49)
- Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide data (2005) (49)
- A comprehensive characterization of cis-acting splicing-associated variants in human cancer (2017) (49)
- ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping information (2011) (48)
- Frequent somatic mutations in epigenetic regulators in newly diagnosed chronic myeloid leukemia (2017) (48)
- On the approximation of protein threading (1997) (48)
- A strategy to select suitable physicochemical attributes of amino acids for protein fold recognition (2013) (48)
- ATP11C is a major flippase in human erythrocytes and its defect causes congenital hemolytic anemia (2016) (48)
- Weighted lasso in graphical Gaussian modeling for large gene network estimation based on microarray data. (2007) (47)
- Prognostic impact of circulating tumor DNA status post-allogeneic hematopoietic stem cell transplantation in AML and MDS. (2019) (47)
- Currents in Computational Molecular Biology (2000) (47)
- Finding optimal gene networks using biological constraints. (2003) (47)
- Utilizing Evolutionary Information and Gene Expression Data for Estimating Gene Networks with Bayesian Network Models (2005) (46)
- Boundary Formation by Notch Signaling in Drosophila Multicellular Systems: Experimental Observations and Gene Network Modeling by Genomic Object Net (2002) (46)
- A microarray analysis of gnotobiotic mice indicating that microbial exposure during the neonatal period plays an essential role in immune system development (2012) (46)
- Comparing Pearson, Spearman and Hoeffding's d Measure for Gene Expression Association Analysis (2009) (45)
- ArrayCluster: an analytic tool for clustering, data visualization and module finder on gene expression profiles (2006) (45)
- Clonal leukemic evolution in myelodysplastic syndromes with TET2 and IDH1/2 mutations (2014) (45)
- Frequent germline mutations of HAVCR2 in sporadic subcutaneous panniculitis-like T-cell lymphoma. (2019) (44)
- Structural Modeling and Analysis of Signaling Pathways Based on Petri Nets (2006) (44)
- Haploinsufficiency of Sf3b1 leads to compromised stem cell function but not to myelodysplasia (2014) (44)
- A novel ASXL1–OGT axis plays roles in H3K4 methylation and tumor suppression in myeloid malignancies (2018) (43)
- Optimal Search on Clustered Structural Constraint for Learning Bayesian Network Structure (2010) (43)
- Elevated β-catenin pathway as a novel target for patients with resistance to EGF receptor targeting drugs (2015) (43)
- A new regulatory interaction suggested by simulations for circadian genetic control mechanism in mammals (2006) (42)
- Understanding endothelial cell apoptosis: what can the transcriptome, glycome and proteome reveal? (2007) (42)
- Combined landscape of single-nucleotide variants and copy number alterations in clonal hematopoiesis (2021) (42)
- Recurrent genetic defects on chromosome 7q in myeloid neoplasms (2014) (41)
- Sex differences in oncogenic mutational processes (2019) (41)
- Clinical significance of T cell clonality and expression levels of immune-related genes in endometrial cancer (2017) (41)
- Simulation-Based Validation of the p53 Transcriptional Activity with Hybrid Functional Petri Net (2006) (41)
- A Novel Network Profiling Analysis Reveals System Changes in Epithelial-Mesenchymal Transition (2011) (41)
- The Transcriptional Landscape of p53 Signalling Pathway (2017) (41)
- Comprehensive analysis of indels in whole-genome microsatellite regions and microsatellite instability across 21 cancer types (2018) (41)
- The C Clustering Library (2005) (41)
- Identification of RNA-Binding Protein LARP4B as a Tumor Suppressor in Glioma. (2016) (40)
- Lung adenocarcinoma subtypes definable by lung development-related miRNA expression profiles in association with clinicopathologic features. (2014) (40)
- Prescription of Kampo Drugs in the Japanese Health Care Insurance Program (2013) (40)
- The rs6983267 SNP Is Associated with MYC Transcription Efficiency, Which Promotes Progression and Worsens Prognosis of Colorectal Cancer (2013) (39)
- Loss of DNA Damage Response in Neuroblastoma and Utility of a PARP Inhibitor (2017) (39)
- Invariant patterns of clonal succession determine specific clinical features of myelodysplastic syndromes (2019) (39)
- Recurrent genetic defects on chromosome 5q in myeloid neoplasms (2016) (38)
- Towards Biopathway Modeling and Simulation (2003) (38)
- Characterization of T-cell Receptor Repertoire in Inflamed Tissues of Patients with Crohn's Disease Through Deep Sequencing (2016) (38)
- Long-term outcome of 6-month maintenance chemotherapy for acute lymphoblastic leukemia in children (2017) (37)
- Metagenome Data on Intestinal Phage-Bacteria Associations Aids the Development of Phage Therapy against Pathobionts. (2020) (37)
- Classification of primary liver cancer with immunosuppression mechanisms and correlation with genomic alterations (2020) (36)
- Genomic data assimilation for estimating hybrid functional Petri net from time-course gene expression data. (2006) (36)
- Combined Cohesin-Runx1 Deficiency Synergistically Perturbs Chromatin Looping and Causes Myelodysplastic Syndromes. (2020) (35)
- Transcriptome analysis offers a comprehensive illustration of the genetic background of pediatric acute myeloid leukemia. (2019) (35)
- Characterization of the T cell repertoire by deep T cell receptor sequencing in tissues and blood from patients with advanced colorectal cancer (2016) (34)
- Foundations of Systems Biology - Using Cell Illustrator® and Pathway Databases (2009) (34)
- Cell Cycle Gene Networks Are Associated with Melanoma Prognosis (2012) (34)
- Modeling and estimation of dynamic EGFR pathway by data assimilation approach using time series proteomic data. (2006) (34)
- Ligand-based gene expression profiling reveals novel roles of glucocorticoid receptor in cardiac metabolism. (2009) (34)
- High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations (2020) (34)
- Integrated exome and RNA sequencing of dedifferentiated liposarcoma (2019) (33)
- TERT promoter mutations and chromosome 8p loss are characteristic of nonalcoholic fatty liver disease‐related hepatocellular carcinoma (2016) (33)
- Use of Gene Networks for Identifying and Validating Drug Targets (2003) (32)
- Genomic Object Net: II. Modelling biopathways by hybrid functional Petri net with extension. (2003) (32)
- Functional characterization of a novel GFI1B mutation causing congenital macrothrombocytopenia (2015) (32)
- Molecular classification and diagnostics of upper urinary tract urothelial carcinoma. (2021) (32)
- A state space representation of VAR models with sparse learning for dynamic gene networks. (2010) (32)
- Statistical Analysis of Hie (Cold Sensation) and Hiesho (Cold Disorder) in Kampo Clinic (2013) (32)
- Frequent Genetic Alterations in Immune Checkpoint-Related Genes in Intravascular Large B-Cell Lymphoma. (2020) (32)
- Challenges for Intelligent Systems in Biology (2001) (32)
- Single-nucleotide polymorphisms in the class II region of the major histocompatibility complex in Japanese patients with immunoglobulin A nephropathy (2002) (32)
- Genetic basis of myeloid transformation in familial platelet disorder/acute myeloid leukemia patients with haploinsufficient RUNX1 allele (2016) (32)
- Parameter Estimation of In Silico Biological Pathways with Particle Filtering Towards a Petascale Computing (2008) (32)
- Exploring temporal transcription regulation structure of Aspergillus fumigatus in heat shock by state space model (2009) (31)
- The hypusine cascade promotes cancer progression and metastasis through the regulation of RhoA in squamous cell carcinoma (2016) (31)
- An efficient grid layout algorithm for biological networks utilizing various biological attributes (2007) (31)
- N-cadherin expression is a potential survival mechanism of gefitinib-resistant lung cancer cells. (2011) (31)
- Error tolerant model for incorporating biological knowledge with expression data in estimating gene networks (2006) (31)
- Analysis of PPARα-dependent and PPARα-independent transcript regulation following fenofibrate treatment of human endothelial cells (2009) (31)
- Myelofibrosis complicated by infection due to Candida albicans: emergence of resistance to antifungal agents during therapy. (1997) (30)
- Modeling Nonlinear Gene Regulatory Networks from Time Series Gene Expression Data (2008) (30)
- Detection of APC mosaicism by next-generation sequencing in an FAP patient (2015) (30)
- Comprehensive analysis of genetic aberrations linked to tumorigenesis in regenerative nodules of liver cirrhosis (2019) (30)
- Exome sequencing identified RPS15A as a novel causative gene for Diamond-Blackfan anemia (2017) (30)
- Somatic PHF6 mutations in 1760 cases with various myeloid neoplasms (2016) (30)
- Which classes of elementary formal systems are polynomial-time learnable (1991) (30)
- The Lexicographically First Maximal Subgraph Problems: P-Completeness and NC Algorithms (1987) (29)
- In utero gene therapy rescues microcephaly caused by Pqbp1-hypofunction in neural stem progenitor cells (2014) (29)
- Contribution of comparative fish studies to general endocrinology: structure and function of some osmoregulatory hormones. (2006) (29)
- A Weighted Profile Based Method for Protein-RNA Interacting Residue Prediction (2006) (29)
- Genomic landscape of colitis-associated cancer indicates the impact of chronic inflammation and its stratification by mutations in the Wnt signaling (2017) (29)
- Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data (2004) (29)
- Clonal evolution and clinical implications of genetic abnormalities in blastic transformation of chronic myeloid leukaemia (2021) (29)
- Association of a single-nucleotide polymorphism in the immunoglobulin μ-binding protein 2 gene with immunoglobulin A nephropathy (2005) (29)
- Computational Strategy for Discovering Druggable Gene Networks from Genome-Wide RNA Expression Profiles (2005) (29)
- Somatic Mosaicism for a NRAS Mutation Associates with Disparate Clinical Features in RAS-associated Leukoproliferative Disease: a Report of Two Cases (2015) (28)
- Functional Restoration of Bacteriomes and Viromes by Fecal Microbiota Transplantation. (2021) (28)
- Early detection and evolution of preleukemic clones in therapy-related myeloid neoplasms following autologous SCT. (2018) (28)
- Multivariate gene expression analysis reveals functional connectivity changes between normal/tumoral prostates (2008) (28)
- Genomon ITDetector: a tool for somatic internal tandem duplication detection from cancer genome sequencing data (2015) (27)
- A Female Patient with Incomplete Hemophagocytic Lymphohistiocytosis Caused by a Heterozygous XIAP Mutation Associated with Non-Random X-Chromosome Inactivation Skewed Towards the Wild-Type XIAP Allele (2015) (27)
- Bootstrap Analysis of Gene Networks Based on Bayesian Networks and Nonparametric Regression (2002) (27)
- The Steiner Minimal Tree problem in the λ-geometry plane (1996) (27)
- Efficiently Finding Regulatory Elements Using Correlation with Gene Expression (2004) (27)
- Replication stress triggers microsatellite destabilization and hypermutation leading to clonal expansion in vitro (2019) (27)
- A filter based feature selection algorithm using null space of covariance matrix for DNA microarray gene expression data (2012) (27)
- Computational gene network analysis reveals TNF-induced angiogenesis (2012) (27)
- Genetic and transcriptional landscape of plasma cells in POEMS syndrome (2019) (27)
- AYUMS: an algorithm for completely automatic quantitation based on LC-MS/MS proteome data and its application to the analysis of signal transduction (2007) (27)
- Evaluation of Sequence Features from Intrinsically Disordered Regions for the Estimation of Protein Function (2014) (27)
- Aberrant DNA Methylation Is Associated with a Poor Outcome in Juvenile Myelomonocytic Leukemia (2015) (26)
- Functional clustering of time series gene expression data by Granger causality (2012) (26)
- Phosphoethanolamine Accumulation Protects Cancer Cells under Glutamine Starvation through Downregulation of PCYT2. (2019) (26)
- Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments (2017) (26)
- De Novo Mutations Activating Germline TP53 in an Inherited Bone-Marrow-Failure Syndrome. (2018) (26)
- Tracing the development of acute myeloid leukemia in CBL syndrome. (2014) (26)
- Understanding intratumor heterogeneity by combining genome analysis and mathematical modeling (2018) (26)
- Parallel Algorithms for Refutation Tree Problem on Formal Graph Systems (1992) (25)
- A between-Class Overlapping Filter-Based Method for transcriptome Data Analysis (2012) (25)
- Whole-genome landscape of adult T-cell leukemia/lymphoma. (2021) (25)
- Granger Causality in Systems Biology: Modeling Gene Networks in Time Series Microarray Data Using Vector Autoregressive Models (2010) (25)
- Modeling and Simulation of Fission Yeast Cell Cycle on Hybrid Functional Petri Net (2004) (24)
- Strategy of finding optimal number of features on gene expression data (2011) (24)
- Hypoxic adaptation of leukemic cells infiltrating the CNS affords a therapeutic strategy targeting VEGFA. (2017) (24)
- Vasohibin-1 is identified as a master-regulator of endothelial cell apoptosis using gene network analysis (2013) (24)
- Late-Onset Combined Immunodeficiency with a Novel IL2RG Mutation and Probable Revertant Somatic Mosaicism (2015) (24)
- Cell System Ontology: Representation for Modeling, Visualizing, and Simulating Biological Pathways (2007) (23)
- Views: Fundamental Building Blocks in the Process of Knowledge Discovery (2001) (23)
- A List of P-Complete Problems (1989) (23)
- A machine discovery from amino acid sequences by decision trees over regular patterns (1991) (23)
- PIEZO1 gene mutation in a Japanese family with hereditary high phosphatidylcholine hemolytic anemia and hemochromatosis-induced diabetes mellitus (2016) (23)
- Sparse Overlapping Group Lasso for Integrative Multi-Omics Analysis (2015) (23)
- Online model checking approach based parameter estimation to a neuronal fate decision simulation model in Caenorhabditis elegans with hybrid functional Petri net with extension. (2011) (23)
- Genomic Heterogeneity Within Individual Prostate Cancer Foci Impacts Predictive Biomarkers of Targeted Therapy. (2018) (22)
- Molecular pathogenesis of disease progression in MLL-rearranged AML (2018) (22)
- Orengedokuto and berberine improve indomethacin-induced small intestinal injury via adenosine (2009) (22)
- Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (2020) (22)
- Probabilistic expression of spatially varied amino acid dimers into general form of Chou׳s pseudo amino acid composition for protein fold recognition. (2015) (22)
- HapMuC: somatic mutation calling using heterozygous germ line variants near candidate mutations (2014) (21)
- BRCC3 mutations in myeloid neoplasms (2015) (21)
- Systems biology analysis of Drosophila in vivo screen data elucidates core networks for DNA damage repair in SCA1. (2014) (21)
- Automatic drawing of biological networks using cross cost and subcomponent data. (2005) (21)
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- Simulation-Based Validation of the p53 Transcriptional Activity with Hybrid Functional Petri Net. (2011) (3)
- The whole blood transcriptional regulation landscape in 465 COVID-19 infected samples from Japan COVID-19 Task Force (2022) (3)
- ZRSR2 Mutations Cause Dysregulated RNA Splicing in MDS (2014) (3)
- Time-dependent structural transformation analysis to high-level Petri net model with active state transition diagram (2010) (3)
- HAKKE: A Multi-Strategy Prediction System for Sequences (1996) (3)
- Impact of Somatic Mutations on Outcome in Patients with MDS after Stem-Cell Transplantation (2015) (3)
- Fast algorithm for extracting multiple unordered short motifs using bit operations (2002) (3)
- Molecular Profiling of Blastic Transformation in Chronic Myeloid Leukemia (2018) (3)
- ChopSticks: High-resolution analysis of homozygous deletions by exploiting concordant read pairs (2012) (3)
- Interaction-Based Feature Selection for Uncovering Cancer Driver Genes Through Copy Number-Driven Expression Level (2017) (3)
- Estimation of macroscopic parameter in agent-based pandemic simulation (2011) (3)
- Genome-wide DNA methylation analysis in pediatric acute myeloid leukemia (2022) (3)
- U-shaped association between abnormal serum uric acid levels and COVID-19 severity: reports from the Japan COVID-19 Task Force (2022) (3)
- Genomic Data Assimilation for a Hybrid Functional Petri Net Model of Circadian Rhythm with Time Course Gene Expression Data (2006) (2)
- Publisher Correction: Defective Epstein–Barr virus in chronic active infection and haematological malignancy (2019) (2)
- Toward Drawing an Atlas of Hypothesis Classes: Approximating a Hypothesis via Another Hypothesis Model (2002) (2)
- GIMLET: Identifying Biological Modulators in Context-Specific Gene Regulation Using Local Energy Statistics (2017) (2)
- ON AN AUTOMATON WHICH RECOGNIZES A FAMILY OF AUTOMATA (1978) (2)
- Impact of upper and lower respiratory symptoms on COVID-19 outcomes: a multicenter retrospective cohort study (2022) (2)
- VEGFA- a New Therapeutic Target in CNS Leukemia (2016) (2)
- Somatic G17V Rhoa Mutation Specifies Angioimmunoblastic T-Cell Lymphoma (2013) (2)
- Landscape of Genetic Alterations in Adult T-Cell Leukemia/Lymphoma (2014) (2)
- Novel Molecular Pathogenesis and Therapeutic Target in Acute Erythroid Leukemia (2019) (2)
- Gene Set-Based Module Discovery Decodes cis-Regulatory Codes Governing Diverse Gene Expression across Human Multiple Tissues (2010) (2)
- Clinical Effect of Genetic Alterations in Pediatric Patients with B-Progenitor Acute Lymphoblastic Leukemia (2017) (2)
- Serial Sequencing in Myelodysplastic Syndromes Reveals Dynamic Changes in Clonal Architecture and Allows for a New Prognostic Assessment of Mutations Detected in Cross-Sectional Testing (2015) (2)
- Multi-omics analysis defines highly refractory RAS burdened immature subgroup of infant acute lymphoblastic leukemia (2022) (2)
- Genotype-Phenotype Relationships and Therapeutic Targets in Acute Erythroid Leukemia (2020) (2)
- On the Complexity of Deriving Position Specific Score Matrices from Examples (2002) (2)
- Detection of differential distributions of methylation levels (2015) (2)
- Research in Computational Molecular Biology (vol. # 3500) : 9th Annual International Conference, RECOMB 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings (2005) (2)
- Bayesian Network Approach to Estimate Gene Networks (2007) (2)
- Prognostic Impact of Circulating Tumor DNA Status Post-Allogeneic Hematopoietic Stem Cell Transplantation in Acute Myeloid Leukemia and Myelodysplastic Syndrome (2018) (2)
- Computational Genome-Wide Discovery of Aberrant Splice Variations with Exon Expression Profiles (2007) (2)
- Accurate and Flexible Bayesian Mutation Call from Multi-regional Tumor Samples (2019) (2)
- PPM1D and DNMT3A Mutations in Myelodysplasia and Clonal Hematopoiesis (2019) (2)
- More Speed and More Pattern Variations for Knowledge Discovery System BONSAI (2001) (2)
- Distinct, Ethnic, Clinical, and Genetic Characteristics of Myelodysplastic Syndromes with Der(1;7) (2019) (2)
- Prognostic Relevance of Genetic Abnormalities in Blastic Transformation of Chronic Myeloid Leukemia (2020) (2)
- DDX41 Is a Tumor Suppressor Gene Associated with Inherited and Acquired Mutations (2014) (2)
- Alteration of the immune environment in bone marrow from children with recurrent B cell precursor acute lymphoblastic leukemia (2021) (2)
- Model-free unsupervised gene set screening based on information enrichment in expression profiles (2010) (2)
- Inference, Modeling and Simulation of Gene Networks (2003) (2)
- A Foundation of Algorithmic Teaching (1989) (2)
- Approximating Minimum Common Supertrees for Complete k-Ary Trees (1993) (2)
- CSO validator: improving manual curation workflow for biological pathways (2011) (2)
- One-Way Weak-Stack-Counter Automata (1980) (2)
- Inference of Nonlinear Biological Systems by Using Linear Programming (2000) (2)
- Genetic Basis of Myeloid Proliferation Related to Down Syndrome (2012) (2)
- On the complexity of deriving position specific score matrices from positive and negative sequences (2002) (2)
- Impact of accumulative smoking exposure and chronic obstructive pulmonary disease on COVID-19 outcomes: report based on findings from the Japan COVID-19 task force (2022) (2)
- Revised version 2 ) Biallelic DICER 1 mutations in sporadic pleuropulmonary blastoma Running title Biallelic DICER 1 mutations in sporadic PPB (2014) (2)
- Clinical significance of prediabetes, undiagnosed diabetes and diagnosed diabetes on critical outcomes in COVID‐19: Integrative analysis from the Japan COVID‐19 task force (2022) (2)
- Multilayer Cluster Heat Map Visualizing Biological Tensor Data (2013) (2)
- Genomic data assimilation using a higher moment filtering technique for restoration of gene regulatory networks (2015) (2)
- Abstract 94: Genomic landscape and clonal expansions of upper urinary tract urothelial carcinoma (2016) (2)
- Network-Based Predictions and Simulations by Biological State Space Models: Search for Drug Mode of Action (2010) (2)
- Systematized approaches to complexity of subgraph problems (1990) (2)
- Complexity of Finding Alphabet Indexing(Fundamental Studies on Computational Complexity) (1994) (2)
- Identification of a p53-repressed gene module in breast cancer cells (2017) (2)
- Corrigendum: The landscape of somatic mutations in Down syndrome–related myeloid disorders (2013) (2)
- A multifunctional R package for identification of tumor-specific neoantigens (2019) (2)
- Quality control and reproducibility in DNA microarray experiments. (2009) (2)
- Development of Genomic Object Net Builder for Supporting XML Design for Visualization (2002) (2)
- Reconstruction of high read-depth signals from low-depth whole genome sequencing data using deep learning (2017) (2)
- Learning Conformation Rules (2001) (2)
- Spectrum Of Genetic Alterations In Acquired Aplastic Anemia (2013) (2)
- Genetic analysis of pheochromocytoma and paraganglioma complicating cyanotic congenital heart disease. (2022) (2)
- Revolutionizing Cancer Genomic Medicine by AI and Supercomputer with Big Data (2018) (2)
- Virtual Grid Engine: a simulated grid engine environment for large-scale supercomputers (2019) (2)
- Discontinuation of Hemodialysis in a Patient with Anti-GBM Disease by the Treatment with Corticosteroids and Plasmapheresis despite Several Predictors for Dialysis-Dependence (2017) (2)
- Experimental Observations and Simulations by Genomic Object Net of Notch Signaling in Drosophila Multicellular Systems (2002) (1)
- Kidney Podocyte Zebra Bodies after Lung Transplantation for Lymphangioleiomyomatosis. (2022) (1)
- Successful Clinical Sequencing by Molecular Tumor Board in an Elderly Patient With Refractory Sézary Syndrome. (2020) (1)
- Classification of patients with cold sensation by a review of systems database: A single-centre observational study. (2019) (1)
- Robust Sample-Specific Stability Selection with Effective Error Control (2019) (1)
- Novel TENM3–ALK fusion is an alternate mechanism for ALK activation in neuroblastoma (2022) (1)
- Enumeration of Likely Gene Networks and Network Motif Extraction for Large Gene Networks (2003) (1)
- Erratum to: inferring the global structure of chromosomes from structural variations (2015) (1)
- TAKING A WALK ON A GRAPH (1995) (1)
- Description of longitudinal tumor evolution in a case of multiply relapsed clear cell sarcoma of the kidney (2021) (1)
- PredictiveNetwork: predictive gene network estimation with application to gastric cancer drug response-predictive network analysis (2022) (1)
- Molecular Characteristics That Predict Response to Azacitidine Therapy (2019) (1)
- [Successful treatment of pure red cell aplasia with cyclosporin in a patient with T-cell large granular lymphocytic leukemia harboring the STAT3 D661V mutation]. (2019) (1)
- Pathogenic mutations identified by a multimodality approach in 117 Japanese Fanconi anemia patients (2020) (1)
- Various Germline Congenital Disorder Genes Are Somatically Mutated in Myeloid Malignancies (2012) (1)
- Post-azacitidine clone size predicts outcome of patients with myelodysplastic syndromes and related myeloid neoplasms. (2023) (1)
- UBTF‐internal tandem duplication as a novel poor prognostic factor in pediatric acute myeloid leukemia (2022) (1)
- PREDICTING DIFFERENCES IN GENE REGULATORY SYSTEMS BY STATE SPACE MODELS (2008) (1)
- Mutation Screening Associated with Chromosome 7 Abnormalities Using Next Generation Whole Exome Sequencing (2012) (1)
- Molecular Signatures That Predict Response to Azacitidine Treatment for Myelodysplastic Syndromes (2017) (1)
- Analogy is NP-hard (1991) (1)
- DDIT: An Online Predictor for Multiple Clinical Phenotypic Drug-Disease Associations (2022) (1)
- Role of the Orphan Transporter SLC35E1 in the Nuclear Egress of Herpes Simplex Virus 1 (2022) (1)
- Uncovering Molecular Mechanisms of Drug Resistance via Network-Constrained Common Structure Identification (2022) (1)
- Vasohibin-1 is identified as a master-regulator of endothelial cell apoptosis using gene network analysis (2013) (1)
- Abstract 5177: Genome-wide profiling of somatic mutations in liver cancers revealed significantly mutated genes and non-coding regions in liver cancers (2014) (1)
- [Autologous peripheral blood stem cell transplantation for double-refractory myeloma with K-RAS and N-RAS mutations]. (2017) (1)
- Frequent Activating Somatic Alterations in T-Cell Receptor / NF-κb Signaling in Adult T-Cell Leukemia/Lymphoma (2015) (1)
- Development of Philadelphia chromosome-negative acute myeloid leukemia with IDH2 and NPM1 mutations in a patient with chronic myeloid leukemia who showed a major molecular response to tyrosine kinase inhibitor therapy (2021) (1)
- A Weighting Profile Method for Protein-RNA Interaction Prediction (2005) (1)
- Genetic Basis of Primary Central Nervous System Lymphoma (2015) (1)
- Research in Computational Molecular Biology (2008) (1)
- PDB-DO: Database of Disorder (1999) (1)
- Detection of differential distributions of methylation patterns (2015) (1)
- Genomic Object Net: Petri Net Enhancement for Multi-Cellular Processes (2001) (1)
- A NOTE ON THE REGURALITY OF FUZZY LANGUAGES (1978) (1)
- Collocation-based sparse estimation for constructing dynamic gene networks. (2010) (1)
- Gene Finding Using HAKKE System (1997) (1)
- Whole Exome Sequencing Reveals Clonal Evolution Pattern and Driver Mutations Of Relapsed Pediatric AML (2013) (1)
- Donor cell-derived transient abnormal myelopoiesis as a specific complication of umbilical cord blood transplantation (2018) (1)
- Gene regulatory network clustering for graph layout based on microarray gene expression data. (2010) (1)
- Computational Tactics for Precision Cancer Network Biology (2022) (1)
- OVarCall: Bayesian Mutation Calling Method Utilizing Overlapping Paired-End Reads. (2017) (1)
- PLOS Computational Biology 2017 Reviewer and Editorial Board Thank You (2018) (1)
- Xprediction: Explainable EGFR-TKIs response prediction based on drug sensitivity specific gene networks (2022) (1)
- Repeated Lineage Switches in an Elderly Case of Refractory B-Cell Acute Lymphoblastic Leukemia With MLL Gene Amplification: A Case Report and Literature Review (2022) (1)
- Comprehensive Sequencing Analysis in Subcutaneous Panniculitis-like T-Cell Lymphoma (2017) (1)
- Spliceosomal Gene LUC7L2 Mutation Causes Missplicing and Alteration Of Gene Expression In Myeloid Neoplasms (2013) (1)
- Analysis of questionnaire for traditional medical and develop decision support system (2012) (1)
- Abstract 3294: Clonal evolution and integral analysis of hepatoblastoma (2015) (1)
- Computational Intelligence Methods for Bioinformatics and Biostatistics (2011) (1)
- Global gene network exploration based on explainable artificial intelligence approach (2020) (1)
- Two Novel Distinct Subtypes of Myeloid Neoplasms Molecularly Associated with Histone H3K36 Methylations (2015) (1)
- ChopSticks: High-resolution analysis of homozygous deletions by exploiting concordant read pairs (2012) (1)
- Inferring Contagion in Regulatory Networks (2011) (1)
- Knowledge Acquisition from Amino Acid Sequences byMachine Learning System BONSAI Authors (2007) (1)
- Assignment of Certainty-Factor Parameters with a Given Reasoning Tree for the Prediction of Protein Localization Sites (1994) (1)
- IL-3 Changing Cancer Genomics and Cancer Genomic Medicine by Artificial Intelligence and Large-Scale Data Analysis (2021) (1)
- A framework for generating interactive reports for cancer genome analysis (2017) (1)
- Special Issue on Surveys on Discovery Science (2000) (1)
- Hidden FLT3-D835Y clone in FLT3-ITD-positive acute myeloid leukemia that evolved into very late relapse with T-lymphoblastic leukemia (2018) (1)
- Genome Informatics: New Frontiers of Computer Science and Biosciences (1996) (1)
- GENE NETWORK INFERENCE AND BIOPATHWAY MODELING (2004) (1)
- Alphabet Indexing by Cluster Analysis (1994) (1)
- A hierarchy theorem for multihead stack-counter automata (1982) (1)
- Der(1;7)(q10;p10) Presents with a Unique Genetic Profile and Frequent ETNK1 Mutations in Myeloid Neoplasms (2021) (1)
- Abstract 502: Circulating exosomal miR-203 is associated with metastasis via inducing tumor-associated macrophages in colorectal cancer (2018) (1)
- Estimation of abrupt changes in sentinel observation data of influenza epidemics in Japan (2013) (1)
- EPOR/JAK/STAT Signaling Pathway As Therapeutic Target of Acute Erythroid Leukemia (2021) (1)
- Starting Cell Illustrator (2009) (1)
- A likelihood-free filtering method via approximate Bayesian computation in evaluating biological simulation models (2016) (1)
- A TCR Sequence Data Analysis Pipeline: Tcrip (2015) (1)
- High performance computing of a fusion gene detection pipeline on the K computer (2015) (1)
- Dyserythropoietic anaemia with an intronic GATA1 splicing mutation in patients suspected to have Diamond‐Blackfan anaemia (2022) (1)
- Comprehensive Analysis of 343 Genes Using Targeted Sequencing Panel By Next-Generation Sequencer in 77 Pediatric AML Patients with Normal and Complex Karyotypes: Jccg Study, JPLSG AML-05 (2018) (1)
- Simulation of Biological Systems by Hybrid Petri Net with an Enhancement (2002) (1)
- A new regulatory interaction suggested by simulations for circadian genetic control mechanism in mammals. (2005) (1)
- CSML2SBML: A novel tool for converting quantitative biological pathway models from CSML into SBML (2014) (1)
- Symbolic hierarchical clustering for visual analogue scale data (2011) (1)
- Whole Exome Sequencing to Predict Response to Hypomethylating Agents in MDS (2012) (1)
- Functional Analysis of SRSF2 Mutations in Myelodysplastic Syndromes and Related Disorders (2011) (1)
- RoDiCE: Robust differential protein co-expression analysis for cancer complexome (2020) (1)
- Machine Discovery of a Negative Motif (1991) (1)
- Detection of Novel Pathogenic Gene Rearrangements in Pediatric Acute Myeloid Leukemia By RNA Sequencing (2015) (1)
- Hybrid Functional Petri Net with Extension for Dynamic Pathway Modeling (2016) (1)
- Whole Exome Sequencing Reveals Spectrum of Gene Mutations in Pediatric AML (2012) (1)
- HypothesisCreator: Concepts for Accelerating the Computational Knowledge Discovery Process (2001) (1)
- Novel COL4A1 mutations identified in infants with congenital hemolytic anemia in association with brain malformations (2020) (1)
- Distinctive Genetic Features of Plasma Cells in POEMS Syndrome (2016) (1)
- Novel and Significant Impact of Germline Variants Predisposed to Pathogenic Somatic Mutations and Loss of Heterozygosity (LOH) in Myelodysplastic Syndromes (MDS) and Clonal Hematopoiesis of Indeterminate Potential (CHIP) (2018) (1)
- Molecular Defects In BRCC3 Complex, a Novel Pathogenic Pathway In MDS (2013) (1)
- Memory-Efficient Clustering Algorithms for Microarray Gene Expression Data (2005) (1)
- Simulation of Drosophila Boundary Cell Formation in Forced-Expression of Notch Δ E (2003) (1)
- Machine Learning Prediction of Amino Acid Patterns in Protein N-myristoylation (2006) (1)
- Linear Tensor Projection Revealing Nonlinearity (2020) (1)
- Whole-Genome Sequencing of Primary Central Nervous System Lymphoma and Diffuse Large B-Cell Lymphoma (2016) (1)
- Abstract 3568: Quantitative t cell receptor (tcr) repertoire analysis by next-generation sequencing (ngs) in non-small cell lung cancer patients treated with therapeutic cancer peptide vaccines (2014) (1)
- Prediction of debacle points for robustness of biological pathways by using recurrent neural networks. (2005) (1)
- Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models (2008) (1)
- ASXL1 Mutations Predict a Poor Response to Darbepoetin Alfa in Anemic Patients with Low-Risk MDS: A Multicenter, Phase II Study (2020) (1)
- TAL1 Super Enhancer Aberration and Stil-TAL1 Fusion in Pediatric T Cell Acute Lymphoblastic Leukemia (2016) (1)
- Alphabet Indexing by Cluster Analysis : A Method for Knowledge Acquisition from Amino Acid Sequences (1994) (1)
- Combining Gene Expression Data with DNA Sequence Information for Estimating Gene Networks Using Bayesian Network Model (2003) (1)
- Novel Pathogenic Defects Of Dead/H-Box Helicases In Myeloid Neoplasms (2013) (1)
- Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer (2020) (1)
- Parameter Estimation of Biological Pathways Using Data Assimilation and Model Checking (2011) (1)
- High-speed parameter search of dynamic biological pathways from time-course transcriptomic profiles using high-level Petri net (2020) (1)
- Parameter estimation in multi-compartment SIR model (2014) (1)
- Author Correction: Pan-cancer analysis of whole genomes (2023) (1)
- Landscape of Subclonal Mutations in Myelodysplastic Syndromes (MDS) Allows for a Novel Hierarchy of Clonal Advantage By Combining Germline and Somatic Mutations (2016) (0)
- 270 FOUNDER AND SUBCLONAL SOMATIC MUTATIONS CONTRIBUTING TO LEUKEMIC EVOLUTION IN MYELODYSPLASTIC SYNDROMES AND RELATED MYELOID NEOPLASMS (2015) (0)
- Distinct Features of Chip-Derived and De Novo MDS (2018) (0)
- Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (2020) (0)
- Genetic and clinical landscape of breast cancers with germline BRCA1/2 variants (2020) (0)
- Abstract 4020: Exploring target gene(s) within chromosome 19-amplification detected in a subclone from metastatic tumors in mouse transplantable OSCC (2014) (0)
- Humanity-based Design of Health and Medical Services (2017) (0)
- Characterization of the B-cell receptor repertoires in peanut allergic subjects undergoing oral immunotherapy (2017) (0)
- Genetic Profile of Acute Erythroid Leukemia (2016) (0)
- Capture Sequencing Is a Useful Method for Comprehensive Clonality Analysis Based on Ig/TCR Gene Rearrangements in Acute Lymphoblastic Leukemia (2018) (0)
- Abstract 2229: Whole exome sequencing reveals the landscape of gene mutations and evolution in low-grade glioma (2014) (0)
- Modeling and Simulation of Cyanobacterial Circadian Clock Mechanism by Hybrid Functional Petri Net (2005) (0)
- Simulation of the Pattern Formation in Multicellular Organism by Genomic Object Net (2001) (0)
- Abstract 5754: The genetic aberrations in carcinogenic sequence of colitis-associated cancer (2017) (0)
- Whole Exome and Transcriptome Analyses in Pediatric T-Cell Acute Lymphoblastic Leukemia (2014) (0)
- Algorithms and Computation : 7th International Symposium, ISAAC '96 Osaka, Japan, December 16-18, 1996 Proceedings (1996) (0)
- Integrated molecular analysis of upper urinary tract urothelial carcinoma (2018) (0)
- Time-dependent key element analysis with active state transition diagram: a high-level Petri net approach (2010) (0)
- Development of an MSI-positive colon tumor with aberrant DNA methylation in a PPAP patient (2019) (0)
- Structural Variations Involving Programmed Death Ligands in B-Cell and T-Cell Lymphomas (2016) (0)
- Binary Contingency Table Method for Analyzing Gene Mutation in Cancer Genome (2015) (0)
- Impact of respiratory bacterial infections on mortality in Japanese patients with COVID-19: a retrospective cohort study (2023) (0)
- Abstract 2450: Mutational profiling of MLL-PTD acute myeloid leukemia (2017) (0)
- Network-Based Analysis of Exome Sequencing Mutations Identifies Molecular Subtypes of Myelodysplastic Syndromes (2015) (0)
- Genetic Landscape and Clonal Evolution Following 5-Aza Therapy in Patients with High-Risk Myelodysplastic Syndromes (2016) (0)
- Biallelic DICER 1 mutations in sporadic PPB 2 Financial support (2014) (0)
- Inferring Genetic Networks Using Liner Programming (1999) (0)
- Annotations of Recurrent Structural Variant Events in Pan-cancer Whole Genome Data for Precision Medicine (2021) (0)
- Whole Exome Analysis Reveals Spectrum of Gene Mutations in Juvenile Myelomonocytic Leukemia (2012) (0)
- S135 NGS-BASED COPY-NUMBER ANALYSIS IN MORE THAN 2,000 PATIENTS WITH MYELOID NEOPLASMS (2019) (0)
- PredictiveNetwork: predictive gene network estimation with application to gastric cancer drug response-predictive network analysis (2022) (0)
- Novel Biological Effects and Distinct Patterns of Rhoa Mutations in Adult T-Cell Leukemia/Lymphoma and Angioimmunoblastic T Cell Lymphoma (2014) (0)
- Cell illustrator 4.0: a computational platform for systems biology. (2011) (0)
- Learning Theory Toward Genome l nforrnatics (1993) (0)
- Abstract 6085: Clonal evolution of mammary epithelial cells into breast cancers (2022) (0)
- Dicer is essential for the survival and proliferation of retinal progenitor cells (0)
- Genomic landscape of upper urinary tract urothelial carcinoma (2017) (0)
- Diagnostic Efficacy of Whole-Exome Sequencing in 250 Patients with Congenital Bone Marrow Failure (2014) (0)
- Gene Regulatory Network-Classifier: Gene Regulatory Network-Based Classifier and Its Applications to Gastric Cancer Drug (5-Fluorouracil) Marker Identification (2022) (0)
- Abstract 1426: Targeted sequencing of colorectal cancer in search for prognostic biomarkers (2018) (0)
- Comprehensive Genetic Analysis in Cases of Juvenile Myelomonocytic Leukemia for Prognostic Estimation (2016) (0)
- Post-azacitidine clone size predicts long-term clinical outcome of patients with myelodysplastic syndromes and related myeloid neoplasms (2021) (0)
- Abstract LB-99: EGF receptor tyrosine kinase defines critical prognostic genes of stage IA lung adenocarcinoma (2012) (0)
- NP-HARD ASPECTS IN ANALOGICAL REASONING (1993) (0)
- KRAS mutations Frequently Coexist with High-Risk MLL Fusions and Are Independent Adverse Prognostic Factors in MLL-Rearranged Acute Myeloid Leukemia (2020) (0)
- The Prognostic Value of TP53 Mutations Depends on Clinical Backgrounds in Pediatric Patients with Acute Lymphoblastic Leukemia (2018) (0)
- Symbolic Hierarchical Clustering for Pain Vector (2012) (0)
- Characteristics and Clinical Effectiveness of COVID-19 Vaccination in Hospitalized Patients in Omicron-dominated Epidemic Wave – A Nationwide Study in Japan (2023) (0)
- Analysis of Genomic Predispositions to Sporadic Myeloid Neoplasms Mediated By DDX41 in Japan (2018) (0)
- Abstract B19: Critical prognostic genes for stage I lung adenocarcinoma are identified from normal growth factor- signaling system by overcoming cancer heterogeneity (2010) (0)
- A microarray analysis of gnotobiotic mice indicating that microbial exposure during the neonatal period plays an essential role in immune system development (2012) (0)
- RNA Sequencing Illustrates the Genetic Backgrounds of Pediatric Acute Myeloid Leukemia (2017) (0)
- Publisher Correction: Defective Epstein–Barr virus in chronic active infection and haematological malignancy (2019) (0)
- Publisher Correction: Integrated exome and RNA sequencing of dedifferentiated liposarcoma (2020) (0)
- 24 COMPREHENSIVE ANALYSIS OF ALTERNATIVE RNA SPLICING IN MYELODYSPLASTIC SYNDROMES (2015) (0)
- Foundations of Designing Computational Knowledge Discovery Processes (2002) (0)
- Electronic word count : 6370 words Number of figures and tables : 4 figures and 2 tables Abbreviations (2018) (0)
- Evaluation of N-myristoylation Prediction Tool using Machine Learning (2008) (0)
- Complexity Theory for Parallel Algorithms (1991) (0)
- Distinct molecular subtypes and a high diagnostic urinary biomarker of upper urinary tract urothelial carcinoma (2020) (0)
- Comprehensive genomic analysis of upper urinary tract urothelial carcinoma (2019) (0)
- Author Correction: Patterns of somatic structural variation in human cancer genomes (2020) (0)
- P-001 Next generation whole exome sequencing for recurrent somatic mutations on chromosome 7 (2013) (0)
- Experiments by BONSAI Garden (1995) (0)
- 176-Alphabet Indexing by Cluster Analysis : A Method for Knowledge Acquisition from Amino Acid Sequences (2011) (0)
- Case report: Common clonal origin of concurrent langerhans cell histiocytosis and acute myeloid leukemia (2022) (0)
- A PAC-Learning Algorithm for Conformation Rules and its Experiments (1996) (0)
- Author Correction: Patterns of somatic structural variation in human cancer genomes (2020) (0)
- Late-Onset Combined Immunodeficiency with a Novel IL2RG Mutation and Probable Revertant Somatic Mosaicism (2015) (0)
- Hypoxic adaptation of leukemic cells infiltrating the CNS affords a therapeutic strategy targeting VEGF Running Title: Hypoxic adaptation of leukemic cells in the CNS Authors and affiliations (2017) (0)
- On Modeling and Analyzing Signaling Pathways with Inhibitory Interactions Based on Petri Net (2005) (0)
- Petri Net Based Modeling of Signaling Pathways Including Inhibitory Function (2005) (0)
- Landscape and function of multiple mutations within individual oncogenes (2020) (0)
- Abstract 1511: Origin of synchronous or metachronous multiple pancreatic cancers (2023) (0)
- Gene Expression Profiles and Methylation Analysis in Down Syndrome Related Acute Lymphoblastic Leukemia (2016) (0)
- A Definition of Discovery in Terms of Generalized Descriptional Complexity (1999) (0)
- Editorial Board: Biotechnology Journal 10/2017 (2017) (0)
- Whole Exome Sequencing Shows a Paucity Of Somatic Gene Mutations In Pediatric Idiopathic Bone Marrow Failure Syndrome (2013) (0)
- Virtual Grid Engine: Accelerating thousands of omics sample analyses using large-scale supercomputers (2018) (0)
- Preface (2008) (0)
- COMPUTATIONAL CHALLENGES FOR TOP-DOWN MODELING AND SIMULATION OF BIOLOGICAL PATHWAYS (2008) (0)
- Discovering functional gene pathways associated with cancer heterogeneity via sparse supervised learning (2010) (0)
- A Female Patient with Incomplete Hemophagocytic Lymphohistiocytosis Caused by a Heterozygous XIAP Mutation Associated with Non-Random X-Chromosome Inactivation Skewed Towards the Wild-Type XIAP Allele (2015) (0)
- Abstract 3933: The landscape and clonal architecture in lower grade glioma (2015) (0)
- Identification of Bacteriophages Using Deep Representation Model with Pre-training (2021) (0)
- Azacitidine effectively reduces TP53-mutant leukemic cell burden in secondary acute myeloid leukemia after cord blood transplantation (2018) (0)
- Abstract 3429: Genetic analysis of pancreatic neuroendocrine neoplasms grade 3 (2019) (0)
- Post-Treatment Clone Size Predicts Survival Independently of IPSS-R and Response after Azacitidine Therapy for MDS. (2020) (0)
- Abstract 5875: Analysis of clonal expansion in epithelium affected by ulcerative colitis reveals frequent mutations affecting IL-17 signaling pathway and novel cancer vulnerability (2020) (0)
- A Parallel Algorithm for the Maximal Co-Hitting Set Problem (1992) (0)
- Mutational Spectrum of Myelodysplastic Syndrome Malignancies Revealed by Whole Exome Sequencing (2012) (0)
- Clonal Evolution in Relapsed Pediatric Acute Lymphoblastic Leukemia (2015) (0)
- Foreword: Genome Informatics (1999) (0)
- Abstract 4385: Landscape of driver gene mutations in stage II and stage III colorectal cancer (2017) (0)
- Artificial Intelligence Guided Precision Medicine Approach to Hematological Disease (2018) (0)
- Comprehensive genetic analysis of pediatric germ cell tumors identifies potential drug targets (2020) (0)
- INDEXING ALTERNATING FINITE AUTOMATA AND BINARY TREE LIKE CIRCUITS (1988) (0)
- Chapter 11 – Gene Networks: Estimation, Modeling, and Simulation (2006) (0)
- Mining Binary Diagram Rules (1996) (0)
- Proceedings of the Advances in bioinformatics and computational biology, and 5th Brazilian conference on Bioinformatics (2010) (0)
- Gene Networks: Estimation, Modeling, and Simulation (2014) (0)
- Abstract 3132: Tumorigenesis of MEN2 pheochromocytoma (2021) (0)
- An Intelligent Tool for Selecting Abstracts in MEDLINE (1999) (0)
- Mass Cytometric Analysis Revealed Dynamic Alteration of the Tumor Immune Environment in Bone Marrow from Children with Recurrent B Cell Precursor Acute Lymphoblastic Leukemia (2021) (0)
- Development of Clinical Decision Support System of Japanese Kampo Medicine (2015) (0)
- Biallelic DICER1 mutations in sporadic pleuropulmonary blastoma Biallelic DICER1 mutations in sporadic PPB (2014) (0)
- Landscape of DNA Methylation and Genetic Profiles in 291 Patients with Myelodysplastic Syndromes (2015) (0)
- Identifications of Highly Aggressive Phenotype with SPI1 Overexpression in Pediatric T Cell Acute Lymphoblastic Leukemia/Lymphoma (2016) (0)
- Clinical Significance of Mutations and Copy Number Lesions on Prognosis of Patients with MDS after Unrelated Bone Marrow Transplantation (2016) (0)
- Distributed Client-Server System Architecture for High Performance Simulations on Genomic Object Net (2003) (0)
- Pathway Modeling and Simulation (2009) (0)
- Delay Time Estimation for Petri Net Models of Signaling Pathways Based on Experimental Data (2008) (0)
- Special RECOMB 2002 Issue (2004) (0)
- Abstract 3401: Comprehensive analysis of genetic alterations and intratumor heterogeneity in myxofibrosarcoma (2018) (0)
- COL4A1 is a Novel Causative Gene Responsible for Congenital Hemolytic Anemia, Representing Characteristic Clinical Course in Infants (2015) (0)
- Prognosis of Pediatric Acute Myeloid Leukemia with KMT2A-MLLT3 According to DNA Methylation Patterns: Jccg JPLSG AML-05 Study (2022) (0)
- Development of a System for Automatic Construction of Cell-Lineage of C . elegans from Nomarski DIC Microscope Images (2000) (0)
- Binary contingency table method for analysing gene mutation in cancer genome (2016) (0)
- Identification of novel susceptibility loci for tuberous sclerosis complex (TSC) in the Japanese population (2019) (0)
- Parallelized Knowledge Discovery System : An Enhancement to BONSAI (1998) (0)
- Abstract 6066: Genomic analysis of end-stage renal disease (2023) (0)
- A Novel Diagnostic Method For AITL By Detecting RHOA G17V Hotspot Mutation Using Allele-Specific Real-Time PCR (2013) (0)
- Tokuda Akihiro Tomida Shinya Toyokuni Hitoshi Tsuda Shoichiro Tsugane Tatsuhiko Tsunoda Heiichiro Udono Koji Ueda Yoshimasa Uehara Hiroo Ueno Kazuo Umezawa Toshikazu Ushijima Toshihiko Wakabayashi Kenji Wakai Tetsuro Watabe (2016) (0)
- Frequent mutations that converge on the NFKBIZ pathway in ulcerative colitis (2019) (0)
- Whole-Exome Sequencing Reveals a Paucity of Somatic Gene Mutations in Aplastic Anemia and Refractory Cytopenia of Childhood (2014) (0)
- Abstract 164: Clonal evolution in noncancerous esophageal mucosa in normal and cancer-bearing individuals (2016) (0)
- Parallelized Knowledge Discovery System (1998) (0)
- Ancestral Events Including Germline and Somatic Mutations Determine Subclonal Events and Affect Phenotype of Progression in MDS (2017) (0)
- On the Complexity of Data Mining for Binary Decision Diagram Rules (1998) (0)
- Abstract 2456: Distinct genomic landscape of upper urinary tract urothelial carcinoma (2017) (0)
- Granger Causality for Time Series Gene Expression Data (2016) (0)
- $Delta^p _2$Complete Lexicographically First (1987) (0)
- Publisher Correction: Integrated exome and RNA sequencing of dedifferentiated liposarcoma (2020) (0)
- Cells series extraction process (2000) (0)
- DMPD : Dynamic Macrophage Pathway Database (2009) (0)
- TP53 and RB1 alterations characterize poor prognostic subgroups in pediatric acute myeloid leukemia. (2023) (0)
- Inferring the global structure of chromosomes from structural variations (2015) (0)
- Somatic Mosaicism for a NRAS Mutation Associates with Disparate Clinical Features in RAS-associated Leukoproliferative Disease: a Report of Two Cases (2015) (0)
- Impact and Function of Somatic PHF6 Mutations in Myeloid Neoplasms (2014) (0)
- Enhancing breakpoint resolution with deep segmentation model: A general refinement method for read-depth based structural variant callers (2019) (0)
- Histological markers, sickle-shaped blood vessels, myxoid area, and infiltrating growth pattern help stratify the prognosis of patients with myxofibrosarcoma/undifferentiated sarcoma (2023) (0)
- Karyotypic and Genetic Abnormalities Associated with Clonal Evolution in Paroxysmal Nocturnal Hemoglobinuria. (2012) (0)
- Title Genetic basis of myeloid transformation in familial platelet disorder / acute myeloid leukemia patients with haploinsufficient RUNX 1 allele (2019) (0)
- Abstract P3-06-04: Clonal evolution of non-malignant proliferative lesions into breast cancers (2019) (0)
- Divergent lncRNA MYMLR regulates MYC oncogene by eliciting promoter-enhancer interaction (2019) (0)
- Identification of a p53 target, CD137L, that mediates growth suppression and immune response of osteosarcoma cells (2017) (0)
- Transform of visual analogue scale data and their clustering (2011) (0)
- Prediction Model for Deficiency-Excess Patterns, Including Medium Pattern (2020) (0)
- Biological and genetic characterization of the role of SRSF2 mutations in the pathogenesis of myelodysplastic syndromes (2015) (0)
- EXPLORING TECHNIQUES FOR OPTIMAL FEATURE AND CLASSIFIER SELECTION FOR PROTEIN MODELING, FUNCTION, AND FOLD RECOGNITION (2015) (0)
- Additional file 1 of Sequence-specific bias correction for RNA-seq data using recurrent neural networks (2017) (0)
- [Digitalizaing pathways]. (2002) (0)
- FORMAL GRAPH SYSTEMS (1994) (0)
- Landscape of Driver Mutations and Their Clinical Impacts in Pediatric Acute Lymphoblastic Leukemia (2016) (0)
- Germline Risks and Clinical Impacts of DDX41 Mutations in Myeloid Malignancies (2022) (0)
- Abstract 1683: Mutational landscape of colorectal cancer with POLE gene mutation (2019) (0)
- Abstract 49: Genomic analysis and simulation for understanding heterogenous cancer evolution (2016) (0)
- Author Correction: The evolutionary history of 2,658 cancers (2023) (0)
- Preface: Special RECOMB 2005 Issue (2006) (0)
- [A system for supporting knowledge discovery from genomic data: software library Hypothesis Creator]. (2001) (0)
- Theory of Parallel Algorithms (1995) (0)
- Introduction of TOP500 supercomputers for bioinformaticians -Case study of GFK- (2015) (0)
- Finding Gene Networks with (2007) (0)
- Identification of Drug Active Pathways Based on Gene Networks Estimated by Bayesian Networks and Gene Expression Data (2005) (0)
- Proceedings of the 7th International Symposium on Algorithms and Computation (1996) (0)
- A temporal shift of the evolutionary principle shaping intratumor heterogeneity in colorectal cancer (2018) (0)
- TET2 Mutations Revealed by Whole Genome Sequencing in Adult T-Cell Leukemia. (2012) (0)
- Abstract 3322: Chronology and risk-dependence of age-related remodelling of oesophageal epithelia (2019) (0)
- Induction Mechanism Description of λ Phage by Hybrid Petri Net (2000) (0)
- Computational Strategy for Systems Biology (2003) (0)
- TAL1 and MYB Abnormalities in Childhood T-Cell Acute Lymphoblastic Leukemia (2015) (0)
- Sequence-specific bias correction for RNA-seq data using recurrent neural networks (2017) (0)
- Abstract 4751: Genetic subtype-specific prognostic significance of genetic alterations in lower-grade gliomas (2016) (0)
- DNA Methylation and Genetic Profiles in 320 Patients with Myelodysplastic Syndromes (2018) (0)
- Abstract 1309: Distinct molecular subtypes and a high diagnostic urinary biomarker of upper urinary tract urothelial carcinoma (2020) (0)
- Genomic Analysis of Therapy-Related Myeloid Neoplasms and Tracking of the Founder Clone By Circulating Tumor DNA (2019) (0)
- Author Correction: Inferring structural variant cancer cell fraction (2022) (0)
- Contribution of MIR9 on Disease Progression of Chronic Myelogenous Leukemia (2017) (0)
- The Presence of Defective Epstein-Barr Virus (EBV) Infection in Patients with EBV-Associated Hematological Malignancy (2018) (0)
- Polynomial Time Algorithm Solving the Refutation Tree Problem for Formal Graph Systems (1993) (0)
- Next-Generation Sequencing Reveal Proviral Genome and Transcriptome in Adult T-Cell Leukemia/Lymphoma (2015) (0)
- ASXL1 mutations with serum EPO levels predict poor response to darbepoetin alfa in lower-risk MDS: W-JHS MDS01 trial (2021) (0)
- Clinical Features of Pediatric Acute Myeloid Leukemia with TP53 and CDKN2A/2B copy Number Alterations (2019) (0)
- Genomic Object Net in JAVA: A Platform for Biopathway Modeling and Simulation (2002) (0)
- Abstract 738: Myxofibrosarcoma is characterized by frequent abnormalities in TP53 and increased genetic instability (2019) (0)
- A Case Study of HFPN Simulation: Finding Essential Roles of Ror Gene in the Interaction of Feedback Loops in Mammalian Circadian Clock (2016) (0)
- Abstract 1368: Genome-wide screening of DNA methylation markers to predict the presence of lymph node metastasis in esophageal squamous cell carcinoma (2014) (0)
- GENO-03PROGNOSTIC SIGNIFICANCE OF GENETIC ALTERATIONS FROM COMPREHENSIVE ANALYSIS IN LOWER-GRADE GLIOMAS. (2015) (0)
- Title Integrated genetic and epigenetic analysis defines novelmolecular subgroups in rhabdomyosarcoma (2019) (0)
- Proceedings - 2011 1st IEEE International Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2011: Preface (2011) (0)
- Null space based feature selection method for gene expression data (2011) (0)
- OVarCall: Bayesian Mutation Calling Method Utilizing Overlapping Paired-End Reads (2016) (0)
- Genomic Object Net: Towards Biopathway Modeling and Simulation (BIOINFORMATICS CENTER - Pathway Engineering) (2002) (0)
- ATP11C Encodes a Major Flippase in Human Erythrocyte and Its Genetic Defect Causes Congenital Non-Spherocytic Hemolytic Anemia (2015) (0)
- Clonal Evolution Pattern and Prognostic Significance of Clonal Architecture in KMT2A-Rearranged Acute Myeloid Leukemia (2021) (0)
- Abstract 3405: Integrated analysis of urothelial carcinoma (2019) (0)
- Abstract 978: Genomic characterization and risk stratification of colorectal cancer (2023) (0)
- Abstract 3547: Frequent genomic alterations to evade the immune system in colorectal cancer with POLE gene mutation (2020) (0)
- Tumor subclonal progression model for cancer hallmark acquisition (2017) (0)
- Comprehensive Genomic Analysis Identified Acute Lymphoblastic Leukemia in Down Syndrome Was Highly Heterogeneous with the High Prevalence of Ph-like Signature (2018) (0)
- PD03-02 NOVEL STRUCTURAL VARIANTS IN CTNNB1 AND MOLECULAR CLASSIFICATION IN CORTISOL-PRODUCING ADENOMA (2023) (0)
- Somatic Mutations and Loss-Of-Heterozygosity Impair The DNA Repair Functions Of CUX1 in Myelodysplastic Syndromes (MDS) (2013) (0)
- Identifying regulational alterations in gene regulatory networks by state space representation of vector autoregressive models and variational annealing (2012) (0)
- Abstract 4602: Recurrent pathway mutations of multiple components of cohesin complex in myeloid neoplasms. (2013) (0)
- Recursive bootstrap L 1-type regularized regression modeling based on parametric statistical test (2015) (0)
- Genomic Object Net: XML Visualization of Simulation Results from Biological Modeling on Hybrid Functional Petri Net (2001) (0)
- Clinical and Molecular Significance of Peripheral Blood Cell-Free DNA in B-Cell Lymphomas for Detection of Genetic Mutations and Correlation with Disease Status (2014) (0)
- Erratum to: inferring the global structure of chromosomes from structural variations (2015) (0)
- p 53 Pathways to Simulate the p 53 Transcriptional Activity (2006) (0)
- Abstract A17: Genomic analysis and simulation for understanding heterogenous cancer evolution (2017) (0)
- Recurrent Gene Mutations in Pediatric Patients with AML By Targeted Sequencing ―the Jccg Study, JPLSG AML-05― (2019) (0)
- ON A LOWER BOUND OF SHEPHERDSON FUNCTION (1979) (0)
- Whole-Exome Resequencing Identifies Somatic Mutations Of BCOR and BCORL1 Transcriptional Corepressor Genes and Major Cohesin Complex Component Genes In Pediatric Acute Myeloid Leukemia (2013) (0)
- Correction: Reduced-intensity conditioning is effective for hematopoietic stem cell transplantation in young pediatric patients with Diamond-Blackfan anemia (2020) (0)
- Title Aberrant splicing and defective mRNA production induced bysomatic spliceosome mutations in myelodysplasia (2019) (0)
- Abstract PR02: Antigen delivery targeting tumor-infiltrating macrophages leads to eradication of tumor highly resistant to immune checkpoint inhibitors (2017) (0)
- Abstract 4921: Next-generation sequencing as a potential tool in the diagnostics of APC mosaicism in FAP patient (2015) (0)
- Abstract 482: Integrated genetic and epigenetic analysis defines novel molecular clusters in rhabdomyosarcoma (2015) (0)
- Editors' Foreword (1998) (0)
- Abstract 736: Cell lineage-oriented clinical sequencing unveils distinct clonal ontogeny of acute myeloid leukemia with myelodysplasia-related changes (2017) (0)
- [Support of knowledge discovery by computational reasonings]. (1997) (0)
- Abstract 3802: Genetic basis of myeloid leukemogenesis in Down syndrome. (2013) (0)
- Abstract 3880: Exploring the role of up-regulated genes in highly metastatic oral cancer subline using spontaneous metastatic mouse model. (2013) (0)
- Abstract 5122: Integral view of copy number alteration and commonly targeted genes in MDS found a new aspect of correlation and interrelationship with mutated components of the RNA splicing machinery (2012) (0)
- HAKKE: Automatic Predictor Generator for Sequences (1995) (0)
- Xenopus Cell Cycle Pathway for Simulating Cell Division Processes by Genomic Object Net (2003) (0)
- Common Variable Immunodeficiency Caused by FANC Mutations (2017) (0)
- ALPHLARD: a Bayesian method for analyzing HLA genes from whole genome sequence data (2018) (0)
- Network profiling analysis for generating modulator-dependent gene networks (2010) (0)
- Introduction to bioinformatics. 6. For knowledge discovery from the biological information data. (1998) (0)
- Poster: Comprehensive pharmacogenomic pathway screening by data assimilation (2011) (0)
- INTRODUCTION - The First IEEE Conference on Healthcare Informatics, Imaging, and Systems biology HISB'11 (2011) (0)
- Genome-Wide Mutational Landscape of Infant Acute Lymphoblastic Leukemia (2016) (0)
- Age-related remodelling of oesophageal epithelia by mutated cancer drivers (2019) (0)
- Genomic analysis of multiple myeloma using targeted capture sequencing in the Japanese cohort (2020) (0)
- Large-scale DNA Barcode Library Generation for Biomolecule Identification in High-throughput Screens (2017) (0)
- Abstract 3184: Integrative analysis of clear cell renal cell carcinoma. (2013) (0)
- Characterization of Tcra and Tcrb Repertoires in Acute Myeloid Leukemia Patients before and after Combined Haploidentical and Umbilical Cord Blood Transplant (2014) (0)
- Detailed Analysis of the Impact of Clonal Hematopoiesis on the Risk of Severe COVID-19 Infection (2022) (0)
- mutations in adult T-cell leukemia / lymphoma (2015) (0)
- Somatic PHF6 Mutations In Myeloid Malignancies (2013) (0)
- Abstract LB-132: Critical prognostic genes for stage I lung cancer are identified from normal growth factor-regulated gene network by overcoming cancer heterogeneity (2010) (0)
- Algorithmic Problems Arising from Genome Informatics (Abstract) (1995) (0)
- OVERCOMING BIOINFORMATICS CHALLENGES WITH SUPERCOMPUTING (2007) (0)
- Transcriptome Analysis Revealed the Entire Genetic Understanding of Pediatric Acute Myeloid Leukemia with a Normal Karyotype (2016) (0)
- Comparative Study of the Effectiveness of Cefotaxime and Cefazolin on Respiratory Tract Infection (1980) (0)
- System of Assisting in Discovery by Designing Views : Data and Experiment (1999) (0)
- O(log*n) Time Parallel Algorithm for Computing Bounded Degree Maximal Subgraphs (1991) (0)
- Integrated Analysis of Copy-Number Alterations and Gene Mutations in 2,000 Patients with Myeloid Neoplasms (2019) (0)
- marrow failure in Japanese Fanconi anemia patients Variant ALDH2 is associated with accelerated progression of bone (2013) (0)
- Abstract 3384: Comprehensive genetic analysis of myxofibrosarcoma and comparison with other soft tissue sarcomas (2017) (0)
- Pathway Simulation Software (2009) (0)
- Abstract A18: Assessing microRNA regulatory networks for biomarker discovery in cancer (2010) (0)
- Identification of the ultrahigh-risk subgroup in neuroblastoma cases through DNA methylation analysis and its treatment exploiting cancer metabolism (2022) (0)
- Machine Learning and Discovery for Bloinformatics: Introduction (1994) (0)
- Abstract 4902: Clonal evolution of proliferative lesions into breast cancers (2020) (0)
- Invariant Patterns of Clonal Succession Determines Specific Phenotypic and Clinical Features of Myelodysplastic Syndromes (MDS) (2018) (0)
- Logistic Regression Model of Binary Disease Trait for Case-Control Study Considering Interactions between SNPs and Environments (2004) (0)
- Super-structure: a decisive framework to rationalize and improve both optimal and heuristic Bayesian network structure learning algorithms (バイオ情報学) (2008) (0)
- Abstract 6734: Identification of the novel TENM3-ALK fusion in an AYA case with ALK rearranged neuroblastoma (2023) (0)
- A feature selection method using improved regularized linear discriminant analysis (2013) (0)
- Abstract 5877: Genetic analysis of metachronous pancreatic cancers (2020) (0)
- PD18-11 DISTINCT MOLECULAR SUBTYPES AND A HIGH DIAGNOSTIC URINARY BIOMARKER OF UPPER URINARY TRACT UROTHELIAL CARCINOMA (2020) (0)
- Clinical clustering with prognostic implications in Japanese COVID-19 patients: report from Japan COVID-19 Task Force, a nation-wide consortium to investigate COVID-19 host genetics (2022) (0)
- Integrated Molecular Analysis of Myelodysplastic Syndromes Using Whole Genome Sequencing (2016) (0)
- Abstract 3803: Genome-wide approach to identify gene targets of pleuropulmonary blastoma. (2013) (0)
- Abstract 3403: Genetic analysis of pheochromocytoma (2019) (0)
- [Immunological study on serum of patients with periodontal disease. I. Immunoglobulin and complement contents (author's transl)]. (1977) (0)
- Abstract 2675: Clonal expansion of skin keratinocyte (2021) (0)
- Gene Networks Viewed through Two Models (2009) (0)
- Distribution and Clinical Features of NOTCH1 Signaling Activating Alterations in Pediatric T-Cell Acute Lymphoblastic Leukemia (T-ALL) (2018) (0)
- Molecular Characterization Of Adult T-Cell Leukemia/Lymphoma (2013) (0)
- Whole Exome Analysis Of Germline Alterations Associated With Myelodysplastic Syndrome (2013) (0)
- Significant Features of DNA Methylation at Bivalent Promotor and Repressed Polycomb Regions in Pediatric AML-the Jccg Study, JPLSG AML-05- (2019) (0)
- Reconstructing Large-Scale Gene Networks with Recursive Elastic Net (2010) (0)
- Abstract 4791: Prognostic model of lower grade gliomas (2015) (0)
- Abstract 741: Clonal evolution of non-malignant proliferative lesions into breast cancers (2019) (0)
- Genomic Hypothesis Creator (1998) (0)
- Myelodysplastic Syndrome Patients Show Mutation-Specific DNA Methylation Patterns (2015) (0)
- 1SK-04 Uncovering Systems in Cancer by Supercomputer(1SK High Performance Computational Approaches to Biological Functions,The 49th Annual Meeting of the Biophysical Society of Japan) (2011) (0)
- Bromodomain protein BRD8 regulates cell cycle progression in colorectal cancer cells through a TIP60-independent regulation of the pre-RC complex (2023) (0)
- Different clonal dynamics of chronic myeloid leukaemia between bone marrow and the central nervous system (2018) (0)
- ViewDesigner: A Tool for Designing Viewscopes in Discovery System HypothesisCreator (1999) (0)
- PS1367 COMPREHENSIVE GENETIC ANALYSIS OF MULTIPLE MYELOMA IN JAPAN (2019) (0)
- Genetic basis of progression and relapse in Clear Cell Sarcoma of the Kidney (2020) (0)
- A tutorial to identify nonlinear associations in gene expression time series data. (2014) (0)
- Statistical Model Selection Method to Analyze Combinatorial Effects of Snps and Environmental Factors for Binary Disease (2006) (0)
- Genetic Landscapes Of Childhood T-Cell Acute Lymphoblastic Leukemia (2013) (0)
- Abstract 4353: Integrated molecular analysis of upper urinary tract urothelial carcinoma (2018) (0)
- Molecular Diversity Detected by Whole Exome Sequencing in Chronic Myelomonocytic Leukemia (2012) (0)
- Recurrent Genomic Aberrations of D-Type Cyclins Are Therapeutic Targets of CDK4/6 Inhibitors in t(8;21) and MLL-Rearranged Acute Myeloid Leukemia (2018) (0)
- Automatic sparse principal component analysis (2020) (0)
- Abstract 3389: Clonal evolution of atypical proliferative lesions into breast cancers (2018) (0)
- Molecular Landscape of Myeloid Neoplasms with Der(1;7)(q10;p10) (2022) (0)
- Computational Drug Target Pathway Discovery: A Bayesian Network Approach (2011) (0)
- 2SD-04 Large scale gene network estimation with K computer(2SD Supercomputing in Molecular Network to Cellular Dynamics,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan) (2012) (0)
- Publishing House "Academic Publications": Founding Publisher Prof. Drumi Bainov Editorial Board (2015) (0)
- Understanding Cancer Through Nutri-Omics Approach for Therapy (2017) (0)
- Principal component analysis using QR decomposition (2012) (0)
- A Parallel Algorithm for Estimating Genome-Wide Gene Networks using Nonparametric Bayesian Networks (2009) (0)
- Abstract 2970: Whole genome sequencing analysis of multiple liver cancer nodules for determination of causal events for multi-occurrence (2015) (0)
- Correction: Global gene network exploration based on explainable artificial intelligence approach (2021) (0)
- Abstract 2464: Divergent lncRNAMYMLRregulates MYC by eliciting DNA looping and promoter-enhancer interaction (2018) (0)
- Abstract P5-13-04: Clonal evolution of mammary epithelial cells into breast cancers (2023) (0)
- Abstract 92: Clonal evolution of proliferative lesions into breast cancers (2021) (0)
- Abstract 6198: Genetic analysis of synchronous or metachronous multiple pancreatic cancers (2022) (0)
- COMPREHENSIVE ANALYSIS OF UPPER URINARY TRACT UROTHELIAL CARCINOMA: MP58‐09 (2018) (0)
- Targeting Tyro3 ameliorates a model of PGRN-mutant FTLD-TDP via tau-mediated synaptic pathology (2018) (0)
- A strategy to select suitable physicochemical attributes of amino acids for protein fold recognition (2013) (0)
- Ensemble smoothers for inference of hidden states and parameters in combinatorial regulatory model (2020) (0)
- EG-13GENOME-WIDE METHYLATION ANALYSIS IDENTIFIES GENOMIC DNA DEMETHYLATION DURING MALIGNANT PROGRESSION OF GLIOMAS. (2014) (0)
- RECOVERY OF INCOMPLETE TABLES UNDER FUNCTIONAL DEPENDENCIES (1982) (0)
- Whole-Exome Sequencing in a Pediatric Patient with Relapsed/Refractory Burkitt Leukemia Resistant to Conventional Chemotherapy (2017) (0)
- Whole-Exome Analysis of Autoimmune Lymphoproliferative Syndrome-like Diseases (2015) (0)
- A System to Find Genetic Networks Based on Weighted Majority Algorithm (2000) (0)
- Whole Exome Sequencing Detecting Kinesin Family Gene Defects In Myeloid Neoplasm (2013) (0)
- NP-complete Problems on Label Updating Calculation in ATMS (1991) (0)
- Theoretical Foundation of the Performance of Phylogeny-Based Somatic Variant Detection (2020) (0)
- Clinical and Genetic Characterization Of Patients With C-CBL Mutated Juvenile Myelomonocytic Leukemia By Whole-Exome/Deep Sequencing (2013) (0)
- HYPOTHESISCREATOR: A Framework for Knowledge Discovery Application Development (2000) (0)
- INTEGRATED PROFILING OF DNA METHYLATION AND MUTATIONS IN PATIENTS WITH MYELODYSPLASTIC SYNDROMES (2019) (0)
- Recovery of Incomplete Tables under Data Dependencies (形式言語理論とオートマトン理論) (1982) (0)
- ViewDesigner : A Tool of Designing Views on Data in Discovery System HypothesisCreator (2000) (0)
- The consequence of AT-rich interacting domain 2 (ARID2) depletion in liver cancers (2015) (0)
- Computational Predictions for Functional Proteins Working after Cleaved in Apoptotic Pathway (2009) (0)
- Genome-Wide Analysis of Non-Coding Alterations in Pan-Myeloid Cancers Using Whole Genome Sequencing (2018) (0)
- Recent computational drug repositioning strategies against SARS-CoV-2 (2022) (0)
- 九州大学学術情報リポジトリ Kyushu University Institutional Repository RECOVERY OF INCOMPLETE TABLES UNDER FUNCTIONAL DEPENDENCIES (0)
- Defective Epstein–Barr virus in chronic active infection and haematological malignancy (2019) (0)
- Abstract 3088: Biallelic DICER1 mutations in sporadic pleuropulmonary blastoma (2014) (0)
- Exploratory Introduction of Cognitive Computing to Clinical Sequencing in Hematological Malignancies (2016) (0)
- Convergent genomic diversity and novel BCAA metabolism in intrahepatic cholangiocarcinoma. (2023) (0)
- the Impact of Clonal Dynamics on Prognosis and Outcome in Myelodysplastic Syndromes (2016) (0)
- Hypothesis Creator for Complete Genome (1997) (0)
- Abstract 5200: Genome-wide integrative analysis for the determination of the consequence of AT-rich interacting domain 2 (ARID2) depletion in hepatocellular carcinoma. (2013) (0)
- Abstract 149: Integrated analysis of intratumor heterogeneity with genetic and epigenetic aberrations during colorectal cancer evolution (2016) (0)
- Abstract 2278: The hypusine cascade promotes cancer progression and metastasis through the regulation of RhoA in squamous cell carcinoma (2015) (0)
- Abstract 2019: Whole exome analysis reveals spectrum of gene mutations in adult T-cell leukemia/lymphoma. (2013) (0)
- Analysis of Aberrant Splicing Data (2002) (0)
- Abstract 1437: Differential role of mutations in clonal evolution in esophageal mucosa at risk for cancer (2017) (0)
- Intra-bin structural variant segmentation for whole-genome sequencing data using U-net (2019) (0)
- Abstract 225: Frequent abnormalities in TP53 and increased genetic instability in myxofibrosarcoma (2020) (0)
- A New Series of $\Delta^p_2$-Complete Problems (1990) (0)
- BONSAI Garden: Parallel Machine Discovery System for Sequences (1994) (0)
- Petri Net Based Modeling and Time-Related Simulation of Signaling Pathways Demonstrated for Apoptosis (2007) (0)
- Genome-wide association studies and heritability analysis reveal the involvement of host genetics in the Japanese gut microbiota (2020) (0)
- Abstract 3581: Characterization of T cell repertoire in transplanted patients with graft versus host disease using next generation DNA sequencer (2014) (0)
- An Introduction to Time‐Varying Connectivity Estimation for Gene Regulatory Networks (2010) (0)
- An Algorithm to Estimate Delay Times in Petri Net Models of Signaling Pathways with Experimental Data (2008) (0)
- [Dynamic pathway modeling language: CSML]. (2005) (0)
- Searching Optimal Bayesian Network Structure on Constraint Search Space: Super-Structure Approach (2010) (0)
- PS983 NOVEL MOLECULAR PATHOGENESIS AND THERAPEUTIC TARGET IN ACUTE ERYTHROID LEUKEMIA (2019) (0)
- The 79 th Annual Meeting of the Japanese Cancer Association Day 2 October 2 ( Friday ) (2020) (0)
- DISTINCT GENOMIC LANDSCAPE OF UPPER URINARY TRACT UROTHELIAL CARCINOMA: MP71‐02 (2017) (0)
- Characterization of Subcellular Localization Signals Using HYPOTHESISCREATOR (2000) (0)
- Abstract 2185: Genetic analysis of metachronous pancreatic cancers (2021) (0)
- Foundations of Systems Biology Foundations of Systems Biology Library of Congress Cataloging-in-publication Data (2000) (0)
- Genome Informatics 2008 : proceedings of the 8th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2008), Zeuten Lake, Berlin, Germany, 9-11 June 2008 (2008) (0)
- Proceedings of the 6th Asia-Pacific Bioinformatics Conference, APBC 2008, 14-17 January 2008, Kyoto, Japan (2008) (0)
- Combined DNA and Transcriptome Sequencing Reveals Discrete Subtypes of Myelodysplasia (2016) (0)
- Abstract 5117: Mutations of cohesin genes in myeloid malignancy (2012) (0)
- Abstract 5126: Genetic analysis of metachronous pancreatic cancers (2019) (0)
- Extramural Update September 2003 (2003) (0)
- Non-Random Interactions between Founder and Subclonal Mutations Shape the Clinical and Morphological Features of MDS (2017) (0)
- Aberrant splicing and defective mRNA production induced by somatic spliceosome mutations in myelodysplasia (2018) (0)
- Novel neuroblastoma amplified sequence (NBAS) mutations in a Japanese boy with fever-triggered recurrent acute liver failure (2019) (0)
- Molecular and Cellular Pathobiology Biallelic DICER 1 Mutations in Sporadic Pleuropulmonary Blastoma (2014) (0)
- Whole Exome Sequencing (“mutatome”) Of Deletion 5q (2013) (0)
- Use of the neutrophil-to-lymphocyte ratio and an oxygen requirement to predict disease severity in patients with COVID-19 (2023) (0)
- Abstract 2223: Genome-wide analysis of copy number alterations and gene mutations in testicular germ cell cancer (2014) (0)
- Diagnostic significance of secondary bacteremia in patients with COVID-19 (2023) (0)
- BPE: Biopathway Executer for Large-Scale Biopathway Modeling and Simulation (2003) (0)
- Abstract P4-05-15: Clonal evolution of proliferative lesions into breast cancers (2020) (0)
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Satoru Miyano is affiliated with the following schools:
