Shoba Ranganathan
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Computational biologist
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Computer Science Biology
Shoba Ranganathan's Degrees
- PhD Bioinformatics Stanford University
- Masters Computer Science University of California, San Diego
- Bachelors Biotechnology University of California, San Diego
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Why Is Shoba Ranganathan Influential?
(Suggest an Edit or Addition)According to Wikipedia, Shoba Ranganathan is an Indian Australian biochemist who is a professor of bioinformatics at Macquarie University. Her research considers computational biology and bioinformatics, genome annotation and structural bioinformatics.
Shoba Ranganathan's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Whole-genome sequence of Schistosoma haematobium (2012) (386)
- A hitchhiker's guide to expressed sequence tag (EST) analysis (2006) (295)
- Ascaris suum draft genome (2011) (262)
- Major colour patterns of reef-building corals are due to a family of GFP-like proteins (2001) (261)
- An Integrated Transcriptomics and Proteomics Analysis of the Secretome of the Helminth Pathogen Fasciola hepatica (2009) (251)
- Interaction of apolipoprotein J-amyloid beta-peptide complex with low density lipoprotein receptor-related protein-2/megalin. A mechanism to prevent pathological accumulation of amyloid beta-peptide. (1997) (185)
- Genome of the human hookworm Necator americanus (2014) (165)
- The whey acidic protein family: a new signature motif and three-dimensional structure by comparative modeling. (1999) (146)
- kappa-Hefutoxin1, a novel toxin from the scorpion Heterometrus fulvipes with unique structure and function. Importance of the functional diad in potassium channel selectivity. (2002) (123)
- Functional and Structural Studies of Wild Type SOX9 and Mutations Causing Campomelic Dysplasia* (1999) (114)
- Methods and protocols for prediction of immunogenic epitopes (2006) (112)
- A common site within factor H SCR 7 responsible for binding heparin, C-reactive protein and streptococcal M protein. (2000) (111)
- Transcriptional Changes in the Hookworm, Ancylostoma caninum, during the Transition from a Free-Living to a Parasitic Larva (2008) (111)
- A common site within factor H SCR 7 responsible for binding heparin, C‐reactive protein and streptococcal M protein (2003) (101)
- Correlations between the solvent hydrogen bond acceptor parameter β and the calculated molecular electrostatic potential (1991) (99)
- OMIA (Online Mendelian Inheritance in Animals): an enhanced platform and integration into the Entrez search interface at NCBI (2005) (93)
- Functional and structural implications of the complement factor H Y402H polymorphism associated with age-related macular degeneration. (2008) (93)
- Modeling the bound conformation of Pemphigus Vulgaris-associated peptides to MHC Class II DR and DQ Alleles (2006) (89)
- SPdb – a signal peptide database (2005) (88)
- Modeling the structure of bound peptide ligands to major histocompatibility complex (2004) (84)
- Accelerating the search for the missing proteins in the human proteome (2017) (84)
- The Gene for a Novel Member of the Whey Acidic Protein Family Encodes Three Four-disulfide Core Domains and Is Asynchronously Expressed during Lactation* (2000) (76)
- Massively Parallel Sequencing and Analysis of the Necator americanus Transcriptome (2010) (76)
- Radial behavior of the average local ionization energies of atoms (1991) (74)
- CASVM: web server for SVM-based prediction of caspase substrates cleavage sites (2007) (72)
- Towards BioDBcore: a community-defined information specification for biological databases (2011) (71)
- A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing (2010) (70)
- SVM-based prediction of caspase substrate cleavage sites (2006) (69)
- Flanking signal and mature peptide residues influence signal peptide cleavage (2008) (68)
- Bioinformatics Education—Perspectives and Challenges (2005) (68)
- Complement factor H: sequence analysis of 221 kb of human genomic DNA containing the entire fH, fHR-1 and fHR-3 genes. (2000) (65)
- First transcriptomic analysis of the economically important parasitic nematode, Trichostrongylus colubriformis, using a next-generation sequencing approach. (2010) (62)
- A comprehensive assessment of N-terminal signal peptides prediction methods (2009) (60)
- Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics (2019) (59)
- Towards BioDBcore: a community-defined information specification for biological databases (2010) (57)
- Secretome: clues into pathogen infection and clinical applications (2009) (57)
- An ethnobotanical study of medicinal plants used by the Yaegl Aboriginal community in northern New South Wales, Australia. (2012) (57)
- In silico grouping of peptide/HLA class I complexes using structural interaction characteristics (2007) (56)
- Physiochemical property space distribution among human metabolites, drugs and toxins (2009) (56)
- Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project. (2015) (55)
- Needles in the EST Haystack: Large-Scale Identification and Analysis of Excretory-Secretory (ES) Proteins in Parasitic Nematodes Using Expressed Sequence Tags (ESTs) (2008) (54)
- SCORPION2: a database for structure-function analysis of scorpion toxins. (2006) (52)
- PhoglyStruct: Prediction of phosphoglycerylated lysine residues using structural properties of amino acids (2018) (51)
- Evaluating Shigella flexneri Pathogenesis in the Human Enteroid Model (2019) (51)
- Clinically Relevant Post-Translational Modification Analyses—Maturing Workflows and Bioinformatics Tools (2018) (51)
- The role of 3-hydroxy-3-methylglutaryl coenzyme A reductase activity in the regulation of ubiquinone synthesis in human fibroblasts. (1980) (49)
- Bond-order-bond-energy correlations (1986) (49)
- Prediction of HLA-DQ3.2ß Ligands: evidence of multiple registers in class II binding peptides (2006) (49)
- Purification of 3-hydroxy-3-methylglutaryl-coenzyme A reductase from rat liver. (1977) (48)
- A proposed minimum skill set for university graduates to meet the informatics needs and challenges of the "-omics" era (2009) (47)
- Multiple ligand binding sites on domain seven of human complement factor H. (2001) (46)
- Impaired function of mitochondrial electron transfer complex I in canine myocardial ischemia: loss of flavin mononucleotide. (1983) (44)
- DEDB: a database of Drosophila melanogaster exons in splicing graph form (2004) (44)
- The Transcriptome Analysis of Strongyloides stercoralis L3i Larvae Reveals Targets for Intervention in a Neglected Disease (2012) (42)
- pDOCK: a new technique for rapid and accurate docking of peptide ligands to Major Histocompatibility Complexes (2010) (41)
- ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform (2007) (41)
- MGAlignIt: a web service for the alignment of mRNA/EST and genomic sequences (2003) (40)
- Advancing standards for bioinformatics activities: persistence, reproducibility, disambiguation and Minimum Information About a Bioinformatics investigation (MIABi) (2010) (38)
- Helminth secretome database (HSD): a collection of helminth excretory/secretory proteins predicted from expressed sequence tags (ESTs) (2012) (38)
- ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform (2007) (37)
- Mass spectrometry-based protein identification in proteomics - a review (2020) (37)
- Gender-enriched transcripts in Haemonchus contortus--predicted functions and genetic interactions based on comparative analyses with Caenorhabditis elegans. (2008) (37)
- MPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules (2003) (37)
- Comprehensive splicing graph analysis of alternative splicing patterns in chicken, compared to human and mouse (2009) (35)
- Ecological niche modeling of customary medicinal plant species used by Australian Aborigines to identify species-rich and culturally valuable areas for conservation (2011) (35)
- Applications of machine learning in GPCR bioactive ligand discovery. (2019) (34)
- Computational evaluation and comparison of some nitramine properties (1988) (34)
- Genome-wide analysis of alternative splicing in cow: implications in bovine as a model for human diseases (2009) (34)
- Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors (2008) (34)
- Racemization of tyrosine in the insoluble protein fraction of brunescent aging human lenses. (1994) (33)
- In silico secretome analysis approach for next generation sequencing transcriptomic data (2011) (33)
- A novel multiplexed immunoassay identifies CEA, IL-8 and prolactin as prospective markers for Dukes’ stages A-D colorectal cancers (2015) (33)
- Adaptive immune system (2013) (33)
- The hand, foot and mouth disease virus capsid: sequence analysis and prediction of antigenic sites from homology modelling. (2002) (33)
- Predicted structure of the extracellular region of ligand‐gated ion‐channel receptors shows SH2‐like and SH3‐like domains forming the ligand‐binding site (1997) (33)
- Effect of Ca2+ blocking agents on the metabolism of low density lipoproteins in human skin fibroblasts. (1982) (33)
- Effect of pantethine on the biosynthesis of cholesterol in human skin fibroblasts. (1982) (32)
- Challenges for Intelligent Systems in Biology (2001) (32)
- Deep insights into Dictyocaulus viviparus transcriptomes provides unique prospects for new drug targets and disease intervention. (2011) (32)
- Linking structural features of protein complexes and biological function (2015) (31)
- Structural diversity of biologically interesting datasets: a scaffold analysis approach (2011) (31)
- A comparative structural bioinformatics analysis of inherited mutations in β-D-Mannosidase across multiple species reveals a genotype-phenotype correlation (2011) (31)
- Meeting Report from the Second “Minimum Information for Biological and Biomedical Investigations” (MIBBI) workshop (2010) (31)
- Cloning and molecular characterization of the first aquatic hyaluronidase, SFHYA1, from the venom of stonefish (Synanceja horrida). (2005) (31)
- Advanced in silico analysis of expressed sequence tag (EST) data for parasitic nematodes of major socio-economic importance--fundamental insights toward biotechnological outcomes. (2009) (29)
- Characterization of a cAMP responsive transcription factor, Cmr (Rv1675c), in TB complex mycobacteria reveals overlap with the DosR (DevR) dormancy regulon (2015) (28)
- Hyaluronan mediates sperm motility by enhancing phosphorylation of proteins including hyaluronan binding protein. (1995) (28)
- The Integrin αLβ2 Hybrid Domain Serves as a Link for the Propagation of Activation Signal from Its Stalk Regions to the I-like Domain* (2004) (28)
- Bioinformatics meets parasitology (2012) (27)
- Xpro: database of eukaryotic protein-encoding genes (2004) (27)
- An analysis of the transcriptome of Teladorsagia circumcincta: its biological and biotechnological implications (2012) (27)
- Effect of calcium-channel-blocking drugs on lysosomal function in human skin fibroblasts. (1984) (26)
- Delineation of modular proteins: Domain boundary prediction from sequence information (2004) (25)
- Systems Proteomics View of the Endogenous Human Claudin Protein Family. (2016) (24)
- Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference (2011) (23)
- Prediction of desmoglein-3 peptides reveals multiple shared T-cell epitopes in HLA DR4- and DR6- associated Pemphigus vulgaris (2006) (23)
- A Workflow for Mutation Extraction and Structure Annotation (2007) (23)
- Unlocking the puzzling biology of the black Périgord truffle Tuber melanosporum. (2013) (23)
- A transcriptomic analysis of the adult stage of the bovine lungworm, Dictyocaulus viviparus (2007) (23)
- The S‐star trial bioinformatics course: An on‐line learning success * (2003) (23)
- Transcriptome analysis reveals pathogenicity and evolutionary history of the pathogenic oomycete Pythium insidiosum. (2014) (23)
- TRANSPORT PHENOMENON (2014) (23)
- The beta very low density lipoprotein present in hepatic lipase deficiency competitively inhibits low density lipoprotein binding to fibroblasts and stimulates fibroblast acyl-CoA:cholesterol acyltransferase. (1988) (21)
- CMKb: a web-based prototype for integrating Australian Aboriginal customary medicinal plant knowledge (2008) (21)
- Characterization of the interaction between heterodimeric αvβ6 integrin and urokinase plasminogen activator receptor (uPAR) using functional proteomics. (2014) (20)
- Oesophagostomum dentatum: potential as a model for genomic studies of strongylid nematodes, with biotechnological prospects. (2007) (20)
- In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches (2008) (19)
- Improved insights into the transcriptomes of the human hookworm Necator americanus--fundamental and biotechnological implications. (2009) (19)
- Identification of ovarian cancer associated genes using an integrated approach in a Boolean framework (2013) (19)
- In silico characterization of immunogenic epitopes presented by HLA-Cw*0401 (2007) (19)
- Cracking the nodule worm code advances knowledge of parasite biology and biotechnology to tackle major diseases of livestock. (2015) (19)
- SDPMOD: an automated comparative modeling server for small disulfide-bonded proteins (2004) (18)
- The transcriptome of Echinostoma caproni adults: further characterization of the secretome and identification of new potential drug targets. (2013) (18)
- Inhibition of the biosynthesis of sterols by phenyl and phenolic compounds in rat liver. (1973) (18)
- The gramicidin A channel: theoretical energy profile computed for single occupancy by a divalent cation, Ca2+ (1985) (17)
- Functional annotation of the human chromosome 7 "missing" proteins: a bioinformatics approach. (2013) (17)
- A male-specific (cysteine-rich) protein of Oesophagostomum dentatum (Strongylida) with structural characteristics of a serine protease inhibitor containing two trypsin inhibitor-like domains (2002) (17)
- Ab initio study of the stepwise hydration of NO (1984) (17)
- Bioinformatic analysis of abundant, gender-enriched transcripts of adult Ascaris suum (Nematoda) using a semi-automated workflow platform. (2009) (16)
- Simple re-instantiation of small databases using cloud computing (2013) (16)
- Protein-protein interactions and prediction: a comprehensive overview. (2013) (16)
- ASGS: an alternative splicing graph web service (2006) (15)
- Accurate prediction of scorpion toxin functional properties from primary structures. (2005) (15)
- APBioNet—Transforming Bioinformatics in the Asia-Pacific Region (2013) (15)
- Structure and function of human low density lipoproteins. Studies using proteolytic cleavage by plasma kallikrein. (1985) (15)
- Network analysis of human protein location (2010) (15)
- Encyclopedia of bioinformatics and computational biology (2019) (15)
- MPID-T (2006) (15)
- Modeling Escherichia coli signal peptidase complex with bound substrate: determinants in the mature peptide influencing signal peptide cleavage (2008) (15)
- Research in a time of enteroids and organoids: how the human gut model has transformed the study of enteric bacterial pathogens (2020) (15)
- Bioinformatics for immunomics (2010) (14)
- Pinpointing the putative heparin/sialic acid-binding residues in the 'sushi' domain 7 of factor H: a molecular modeling study. (1999) (14)
- Effect of trypsin treatment on the heparin- and receptor-binding properties of human plasma low-density lipoproteins. (1986) (14)
- Protocol for Protein Structure Modelling (2019) (14)
- Enhancing protein backbone angle prediction by using simpler models of deep neural networks (2020) (14)
- Prediction of interface residue based on the features of residue interaction network. (2017) (14)
- Mechanistic aspects of biological redox reactions involving NADH. Part 5.—AM1 transition-state studies for the pyruvate–L-lactate interconversion in L-lactate dehydrogenase (1994) (13)
- A multi-factor model for caspase degradome prediction (2009) (13)
- MPID-T2: a database for sequence-structure-function analyses of pMHC and TR/pMHC structures (2011) (13)
- An ab initio study of the binding of N2 to Na+ and K+ (1984) (12)
- Understanding TR Binding to pMHC Complexes: How Does a TR Scan Many pMHC Complexes yet Preferentially Bind to One (2011) (12)
- XdomView: protein domain and exon position visualization (2003) (12)
- Protannotator: a semiautomated pipeline for chromosome-wise functional annotation of the "missing" human proteome. (2014) (12)
- A multi-species comparative structural bioinformatics analysis of inherited mutations in α-D-Mannosidase reveals strong genotype-phenotype correlation (2009) (12)
- Challenges of the next decade for the Asia Pacific region: 2010 International Conference in Bioinformatics (InCoB 2010) (2010) (12)
- In silico approach to screen compounds active against parasitic nematodes of major socio-economic importance (2011) (12)
- Proliferation and Apoptosis Pathways and Factors in Oral Squamous Cell Carcinoma (2022) (11)
- Role of solvent accessibility for aggregation-prone patches in protein folding (2018) (11)
- Molecular similarity and diversity approaches in chemoinformatics (2011) (11)
- Deduction of functional peptide motifs in scorpion toxins (2006) (11)
- Exploration of charge states of balanol analogues acting as ATP-competitive inhibitors in kinases (2017) (11)
- Rational Structure-Based Drug Design (2019) (10)
- Metabolism of glycosylated very-low-density lipoproteins in human skin fibroblasts. (1986) (10)
- Biomarker information extraction tool (BIET) development using natural language processing and machine learning (2010) (10)
- Enzymic formation of p-hydroxybenzoate from p-hydroxycinnamate. (1971) (10)
- Extending Asia Pacific bioinformatics into new realms in the "-omics" era (2009) (10)
- The regulation of the biosynthesis of ubiquinone in the rat. (1975) (10)
- The Asia-Pacific regional perspective on bioinformatics (2001) (10)
- The biosynthesis of ubiquinone in isolated rat heart cells. (1979) (10)
- A site for direct integrin αvβ6·uPAR interaction from structural modelling and docking. (2014) (10)
- κ-Hefutoxin1, a Novel Toxin from the ScorpionHeterometrus fulvipes with Unique Structure and Function (2002) (10)
- Genomic characterization of Tv-ant-1, a Caenorhabditis elegans tag-61 homologue from the parasitic nematode Trichostrongylus vitrinus. (2007) (9)
- Discrete structural features among interface residue-level classes (2015) (9)
- Combining ethnobotany and informatics to discover knowledge from data (2011) (9)
- A computational analysis of the electrostatic potentials and relative bond strengths of hydrazine and some of its 1,1-dimethyl derivatives (1990) (9)
- Emerging strengths in Asia Pacific bioinformatics (2008) (9)
- iSwathX: an interactive web-based application for extension of DIA peptide reference libraries (2018) (9)
- The metabolism of phenolic acids in the rat. (1974) (9)
- Establishing bioinformatics research in the Asia Pacific (2006) (8)
- Towards a career in bioinformatics (2009) (8)
- APBioNet: the Asia-Pacific regional consortium for bioinformatics. (2002) (8)
- Divergent response of homologous ATP sites to stereospecific ligand fluorination for selectivity enhancement. (2017) (8)
- Structural Immunoinformatics: Understanding MHC-Peptide-TR Binding (2009) (8)
- InCoB celebrates its tenth anniversary as first joint conference with ISCB-Asia (2011) (8)
- The integrin alpha L beta 2 hybrid domain serves as a link for the propagation of activation signal from its stalk regions to the I-like domain. (2004) (7)
- The regulation of ubiquinone synthesis in fibroblasts: the effect of modulators of beta-hydroxy-beta-methylglutaryl-coenzyme A reductase activity. (1981) (7)
- Computational analysis of the receptor binding specificity of novel influenza A/H7N9 viruses (2018) (7)
- A practical guide to structure-based prediction of MHC-binding peptides. (2007) (7)
- Human Prestin: A Candidate PE1 Protein Lacking Stringent Mass Spectrometric Evidence? (2017) (6)
- MGAlign, a Reduced Search Space Approach to the Alignment of mRNA Sequences to Genomic Sequences (2003) (6)
- T cell epitopes (2013) (6)
- Structural bioinformatics analysis of variants on GPCR function. (2019) (6)
- Bioinformatics research in the Asia Pacific: a 2007 update (2008) (6)
- De Novo Peptide Sequencing: Deep Mining of High-Resolution Mass Spectrometry Data. (2017) (6)
- Computational B cell vaccine design (2013) (6)
- Novel structural features drive DNA binding properties of Cmr, a CRP family protein in TB complex mycobacteria (2017) (5)
- Stimulation of rat liver 4-hydroxybenzoate: polyprenyl transferase activity by a cytosolic protein factor; evidence for a polyprenyl pyrophosphate transport protein. (1984) (5)
- Chemical approaches to the re-structuring of proteins (1990) (5)
- INHIBITION OF THE BIOSYNTHESIS OF ISOPRENOID COMPOUNDS BY PHENOLIC ACIDS IN THE RAT BRAIN (1974) (5)
- Presence and biosynthesis of a polyprenol-type compound in Ascaris lumbricoides (human). (1972) (5)
- Molecular Dynamics Pinpoint the Global Fluorine Effect in Balanoid Binding to PKCε and PKA (2018) (5)
- Machine Learning Assisted Approach for Finding Novel High Activity Agonists of Human Ectopic Olfactory Receptors (2021) (5)
- High-Throughput Functional Annotation and Data Mining of Fungal Genomes to Identify Therapeutic Targets (2013) (5)
- Medicinal plants of New South Wales, Australia (2012) (5)
- Bacterial Antigens Reduced the Inhibition Effect of Capsaicin on Cal 27 Oral Cancer Cell Proliferation (2021) (5)
- Molecular modeling on the Web. (2001) (4)
- Diverse dynamics features of novel protein kinase C (PKC) isozymes determine the selectivity of a fluorinated balanol analogue for PKCε (2019) (4)
- Looking for Missing Proteins (2019) (4)
- Rapid regulation of apolipoprotein A-I secretion in HepG2 cells by a factor associated with bovine high-density lipoproteins. (1990) (4)
- Critical technologies for bioinformatics (2008) (4)
- GIW and InCoB, two premier bioinformatics conferences in Asia with a combined 40 years of history (2015) (4)
- Combined Bacterial Antigen Lipopolysaccharide and Lipoteichoic Acid Increase Cal 27 Oral Cancer Cell Proliferation (2021) (4)
- The S-Star Trial Bioinformatics Course (2003) (4)
- ML218 HCl Is More Efficient Than Capsaicin in Inhibiting Bacterial Antigen-Induced Cal 27 Oral Cancer Cell Proliferation (2021) (4)
- Structure-Based Drug Design Workflow (2019) (4)
- Graphs in bioinformatics (2010) (4)
- TranSeqAnnotator: large-scale analysis of transcriptomic data (2012) (4)
- Effect of prolactin on human red cell sodium transport (1980) (4)
- InCoB2010 - 9th International Conference on Bioinformatics at Tokyo, Japan, September 26-28, 2010 (2010) (4)
- Lipoprotein-mediated efflux of radiolabeled cholesterol from cells does not indicate net removal of cellular cholesterol mass. (1989) (4)
- The force field of carbon suboxide (1983) (4)
- Prediction of novel mouse TLR9 agonists using a random forest approach (2019) (3)
- A Systematic Bioinformatics Approach to Identify High Quality Mass Spectrometry Data and Functionally Annotate Proteins and Proteomes. (2017) (3)
- InCoB2013 introduces Systems Biology as a major conference theme (2013) (3)
- Addition of protease inhibitors to EDTA containing blood collection tubes does not deliver significant advantage for preservation of plasma for down-stream analysis (2016) (3)
- Characterization of temperature inducible promoters from a novel rolling circle replicating plasmid of Enterococcus faecium DJ1. (2012) (3)
- Intelligent Agent System for Bio-medical Literature Mining (2007) (3)
- Leveraging homologies for cross species plasma proteomics in ungulates using data-independent acquisition. (2021) (3)
- Compliant fields for water, ammonia and methane (1983) (3)
- InCoB2012 Conference: from biological data to knowledge to technological breakthroughs (2012) (3)
- The use of CNDO/force and compliance constant methods in evaluating quadratic potential functions of carbonyl and formyl fluorides (1983) (3)
- BIO-GATS: A Tool for Automated GPCR Template Selection Through a Biophysical Approach for Homology Modeling (2021) (3)
- 2016 update on APBioNet’s annual international conference on bioinformatics (InCoB) (2016) (2)
- T cell signalling (2013) (2)
- Metabolism of apolipoprotein E-containing human plasma lipoproteins by rat and human cells in culture. (1986) (2)
- InCoB2014: mining biological data from genomics for transforming industry and health (2014) (2)
- Compliant fields for formic acid and formamide (1983) (2)
- Semiempirical molecular-orbital studies on the problem of nonclassical resonance in the homoallylic cation (1980) (2)
- iSwathX 2.0 for Processing DDA Spectral Libraries for DIA Data Analysis (2020) (2)
- A two-stage computational approach to predict novel ligands for a chemosensory receptor (2020) (2)
- Studies on the effect of concanavalin A on the metabolism of low density lipoproteins in skin fibroblasts. (1987) (2)
- GIW and InCoB are advancing bioinformatics in the Asia-Pacific (2015) (2)
- Highly Efficient Propane-1,3-dithiol-Mediated Thiol-Disulfide Interchange: A Facile and Clean Methodology for S-S Reduction in Peptides. (1992) (2)
- In silico prediction of immunogenic T cell epitopes for HLA-DQ8 (2012) (2)
- Comparative Genomic Analysis of Glycoylation Pathways in Yeast, Plants and Higher eukaryotes (2006) (2)
- A Bioinformatics Approach to Mine the Microbial Proteomic Profile of COVID-19 Mass Spectrometry Data (2022) (2)
- TranSeqAnnotator: large-scale analysis of transcriptomic data (2012) (2)
- Biological Data Integration Using Network Models (2013) (2)
- International online education: the S-Star trial bioinformatics course (2012) (1)
- Structure-based clustering of major histocompatibility complex (MHC) proteins for broad-based T-cell vaccine design. (2014) (1)
- Scientific publications and databases (2013) (1)
- InCoB2014: bioinformatics to tackle the data to knowledge challenge (2014) (1)
- In silico analysis of expressed sequence tags (EST) from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with database searches (2007) (1)
- Simple re-instantiation of small databases using cloud computing (2013) (1)
- Helminth secretome database (HSD): a collection of helminth excretory/secretory proteins predicted from expressed sequence tags (ESTs) (2012) (1)
- Bioinformatic Analysis to Investigate Metaproteome Composition Using Trans‐Proteomic Pipeline (2022) (1)
- A Universal Day Zero Infectious Disease Testing Strategy Leveraging CRISPR-based Sample Depletion and Metagenomic Sequencing (2022) (1)
- Genome Databases and Browsers (2019) (1)
- InCoB2014: mining biological data from genomics for transforming industry and health (2014) (1)
- Host-Pathogen Interactions (2019) (1)
- MHC and T cell responses (2013) (1)
- Bioinformatics and systems biology research update from the 15th International Conference on Bioinformatics (InCoB2016) (2016) (1)
- Untangling biological networks using bioinformatics (2010) (1)
- PhoglyStruct: Prediction of phosphoglycerylated lysine residues using structural properties of amino acids (2018) (1)
- Computer-Aided Vaccine Design (2013) (1)
- APBioNet's annual International Conference on Bioinformatics (InCoB) returns to India in 2018 (2019) (1)
- An analysis of the transcriptome of Teladorsagia circumcincta: its biological and biotechnological implications (2012) (1)
- In silico methods for the analysis of metabolites and drug molecules (2010) (1)
- InCoB2014: bioinformatics to tackle the data to knowledge challenge (2014) (1)
- Compliant fields for molecular interactions: Water dimer and formic acid dimer (1985) (1)
- InCoB2014: Systems Biology update from the Asia-Pacific (2014) (1)
- 8 – Vaccine safety and quality assessments (2013) (1)
- GIW and InCoB are advancing bioinformatics in the Asia-Pacific (2015) (1)
- Drosophila melanogaster Exon Database (2004) (1)
- MVC Architecture in Bioinformatics web applications and its Java implementation (2005) (1)
- Sequence analysis of 222 KB of human genomic DNA containing the entire FH, FHR-1 and FHR-3 genes (2000) (1)
- Vaccine adjuvant informatics (2013) (1)
- A bioinformatics potpourri (2018) (1)
- Extracting Biomarker Information Applying Natural Language Processing and Machine Learning (2010) (1)
- Editorial: Bioinformatics and the Translation of Data-Driven Discoveries (2022) (1)
- GIW and InCoB, two premier bioinformatics conferences in Asia with a combined 40 years of history (2015) (1)
- Bioinformatics approaches for improving seminal plasma proteome analysis. (2019) (1)
- EnzymicFormation ofp-Hydroxybenzoate fromp-Hydroxycinnamate (1971) (1)
- Coherence analysis discriminates between retroviral integration patterns in CD34+ cells transduced under differing clinical trial conditions (2015) (1)
- Identification of Proteins From Proteomic Analysis (2019) (1)
- InCoB2012 Conference: from biological data to knowledge to technological breakthroughs (2012) (1)
- Crystal structure of Mycobacterium tuberculosis CRP-FNR family transcription factor Cmr (Rv1675c), truncated construct (2017) (0)
- Comprar Bioinformatics for Immunomics | Flower, Darren D.R. | 9781441905390 | Springer (2009) (0)
- InCoB 2007 Welcome Message (2007) (0)
- Classification of BNIP2-Cdc42GAP homology domain family (2004) (0)
- Preface (2019) (0)
- Discrete structural features among interface residue-level classes (2015) (0)
- Early life infection is associated with proinflammatory, atherogenic, and diabetogenic metabolomic and lipidomic profiles at 12 months of age (2022) (0)
- 153 – Coronin 1 is Necessary for M Cell Transcytosis in a Human Enteroid Model of the Follicle Associated Epithelium (2019) (0)
- Comprehensive benchmarking of de novo assembly methods for eukaryotic genomes (2020) (0)
- Role of solvent accessibility for aggregation-prone patches in protein folding (2018) (0)
- Crystal structure of Mycobacterium tuberculosis CRP-FNR family transcription factor Cmr (Rv1675c) (2017) (0)
- A Quest for Missing Proteins: update 2015 on Chromosome-Centric Human (2015) (0)
- S Das Gupta in Memoriam (2012) (0)
- TR Germline Bias (2013) (0)
- Pyro: A Comprehensive Pipeline for Eukaryotic Genome Assembly (2023) (0)
- Metaproteomic Analysis of an Oral Squamous Cell Carcinoma Dataset Suggests Diagnostic Potential of the Mycobiome (2023) (0)
- Clinically-actionable colorectal cancer plasma and tissue proteomic biosignatures (2018) (0)
- Head and Neck Cancer Immunotherapy: Molecular Biological Aspects of Preclinical and Clinical Research (2023) (0)
- Imaginative Order from Reasonable Chaos: Conformation-Driven Activity and Reactivity in Exploring Protein–Ligand Interactions (2018) (0)
- Establishing Bioinformatics Research in the Asia (2006) (0)
- APBioNet's annual International Conference on Bioinformatics (InCoB) returns to India in 2018 (2019) (0)
- WHEY ACIDIC PROTEIN (WAP) FROM THE TAMMAR WALLABY (MACROPUS EUGENII), THEORETICAL MODEL (2000) (0)
- Advances in translational bioinformatics and population genomics in the Asia-Pacific (2012) (0)
- Compliant fields for molecular interactions I: Lithium cation with carbonyl donors (1982) (0)
- TRPA1: A Potential Prognostic Indicator for Oral Squamous Cell Carcinoma (2021) (0)
- Analysis and comparison of γ-retroviral vector integration behaviour in human CD34+cells transduced under conditions employed in the French and English SCID-X1 clinical trials (2013) (0)
- Database on neurotoxins from snakes (2003) (0)
- Introduction to selected papers from GIW/InCoB 2015 (2015) (0)
- Aligning mRNA/EST data to geneomic sequences: a novel approach (2004) (0)
- Towards an Educational Grid for Promoting Bioinformatics Competency in the Asia Pacific (2005) (0)
- Customary medicinal knowledge base (CMKb) (2013) (0)
- Author Correction: Enhancing protein backbone angle prediction by using simpler models of deep neural networks (2021) (0)
- Quantification of Proteins From Proteomic Analysis (2019) (0)
- A novel multiplexed immunoassay identifies CEA, IL-8 and prolactin as prospective markers for Dukes’ stages A-D colorectal cancers (2015) (0)
- Editorial overview: Theory and simulation: demystifying GPCRs - structure, function and drug design. (2019) (0)
- Exhaustive benchmarking of de novo assembly methods for eukaryotic genomes (2023) (0)
- Internet On-Ramp Molecular Modeling on the Web (2001) (0)
- 789 - Enteric Pathogens Induce M Cell Transcytosis in a Human Enteroid Model of the Follicle Associated Epithelium (2018) (0)
- Immunoglobulins and B cell responses (2013) (0)
- Editorship : BMC genomics (2012) (0)
- Exploration of charge states of balanol analogues acting as ATP-competitive inhibitors in kinases (2017) (0)
- 2016 update on APBioNet’s annual international conference on bioinformatics (InCoB) (2016) (0)
- STRUCTURAL MODEL OF THE WILDTYPE HUMAN SOX9-DNA COMPLEX (1999) (0)
- Chemoinformatics module for CMKb, a custromary medicinal database (2008) (0)
- kappa-Hefutoxins: a novel Class of Potassium Channel Toxins from Scorpion venom (2002) (0)
- Comprar Immunoinformatics | Schönbach, Christian | 9780387729671 | Springer (2007) (0)
- TR recognition of MHC-peptide complexes (2013) (0)
- Antisense suppression of a cytokinin-binding protein from Petunia causes excessive branching and reduces adventitious shoot bud induction in vitro (2003) (0)
- MOESM6 of Prediction of novel mouse TLR9 agonists using a random forest approach (2019) (0)
- Radioiodine Uptake Measurements In Thyroid (1988) (0)
- APBioBox-an Asia Pacfic Bioinformatics Grid Software Suite (2003) (0)
- STRUCTURAL MODEL OF THE P170R HUMAN SOX9-DNA COMPLEX (1999) (0)
- Computational analysis of the receptor binding specificity of novel influenza A/H7N9 viruses (2018) (0)
- Whole genome sequences of nematodes of the order Strongylida (2007) (0)
- 4 – Database design (2013) (0)
- Comprar Practical Guide to Protein Bioinformatics: Sequence, Structure and Function | Shoba Ranganathan | 9781584884187 | Informa Healthcare (2007) (0)
- Chemogenomics approach to computer aided drug discovery (2015) (0)
- T cell activation [encyclopaedia entry] (2013) (0)
- Diverse dynamics features of novel protein kinase C (PKC) isozymes determine the selectivity of a fluorinated balanol analogue for PKCε (2019) (0)
- Integration of protein Interaction and Metabolic Data for Subcellular Localization Prediction (2008) (0)
- Interaction of normolipidemic very low density lipoproteins with receptors in human skin fibroblasts. (1985) (0)
- A bioinformatics potpourri (2018) (0)
- Substituent effects on carbonyl bond orders (1991) (0)
- Bioinformatics and systems biology research update from the 15th International Conference on Bioinformatics (InCoB2016) (2016) (0)
- Asia Pacific Bioinformatics Grid Software Development Project : AP BioBox; final report (2004) (0)
- A novel drug combination strategy that redesigns the pharmacological management of oral cancer. (2022) (0)
- SGS: splicing graph server (2005) (0)
- Studies on the effect of storage of normolipidemic plasma on the metabolism of very-low-density lipoprotein cholesterol in human skin fibroblasts. (1988) (0)
- Combating medicinal plant extinction and indigenous culture loss - an Australian Model (2009) (0)
- WHEY ACIDIC PROTEIN (WAP) FROM PIG (SUS SCROFA) (1999) (0)
- Adaptive immune system [encyclopaedia entry] (2013) (0)
- T cell activation (2013) (0)
- Infectious disease informatics (2013) (0)
- Homology Model of human Factor H SCRs 6 and 7 (2002) (0)
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