Sophia Ananiadou
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Greek computational linguist
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Why Is Sophia Ananiadou Influential?
(Suggest an Edit or Addition)According to Wikipedia, Sophia Ananiadou is a Greek-British computer scientist and computational linguist. She led the development of and directs the National Centre for Text Mining in the United Kingdom. She is also Professor in Computer Science in the Department of Computer Science at the University of Manchester.
Sophia Ananiadou's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- brat: a Web-based Tool for NLP-Assisted Text Annotation (2012) (1148)
- Automatic recognition of multi-word terms:. the C-value/NC-value method (2000) (897)
- Developing a Robust Part-of-Speech Tagger for Biomedical Text (2005) (544)
- On the definition of word (2004) (526)
- Distributional Semantics Resources for Biomedical Text Processing (2013) (484)
- Using text mining for study identification in systematic reviews: a systematic review of current approaches (2015) (459)
- Text Mining for Biology And Biomedicine (2005) (404)
- Text mining and its potential applications in systems biology. (2006) (359)
- Text mining and ontologies in biomedicine: Making sense of raw text (2005) (339)
- Event extraction for systems biology by text mining the literature. (2010) (250)
- Stochastic Gradient Descent Training for L1-regularized Log-linear Models with Cumulative Penalty (2009) (239)
- The C-value/NC-value Method of Automatic Recognition for Multi-Word Terms (1998) (219)
- The C-value/NC-value domain-independent method for multi-word term extraction (1999) (187)
- FACTA: a text search engine for finding associated biomedical concepts (2008) (182)
- Identifying Sections in Scientific Abstracts using Conditional Random Fields (2008) (174)
- Applications of text mining within systematic reviews (2011) (173)
- A Neural Layered Model for Nested Named Entity Recognition (2018) (173)
- A Methodology for Automatic Term Recognition (1994) (172)
- Extracting Nested Collocations (1996) (160)
- Reducing systematic review workload through certainty-based screening (2014) (141)
- Analysis of the effect of sentiment analysis on extracting adverse drug reactions from tweets and forum posts (2016) (136)
- Discovering and visualizing indirect associations between biomedical concepts (2011) (136)
- Construction of an annotated corpus to support biomedical information extraction (2009) (135)
- Event extraction across multiple levels of biological organization (2012) (124)
- Boosting automatic event extraction from the literature using domain adaptation and coreference resolution (2012) (123)
- Building an abbreviation dictionary using a term recognition approach (2006) (118)
- Supporting Systematic Reviews Using Text Mining (2009) (118)
- U-Compare: share and compare text mining tools with UIMA (2009) (117)
- Generating Natural Language specifications from UML class diagrams (2008) (115)
- Inter-sentence Relation Extraction with Document-level Graph Convolutional Neural Network (2019) (115)
- Large-Scale Event Extraction from Literature with Multi-Level Gene Normalization (2013) (113)
- Learning string similarity measures for gene/protein name dictionary look-up using logistic regression (2007) (112)
- Connecting the Dots: Document-level Neural Relation Extraction with Edge-oriented Graphs (2019) (110)
- Europe PMC: a full-text literature database for the life sciences and platform for innovation (2014) (95)
- Argo: an integrative, interactive, text mining-based workbench supporting curation (2012) (93)
- Enriching a biomedical event corpus with meta-knowledge annotation (2011) (88)
- Topic detection using paragraph vectors to support active learning in systematic reviews (2016) (84)
- Overview of the interactive task in BioCreative V (2015) (83)
- Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011 (2012) (81)
- BioCause: Annotating and analysing causality in the biomedical domain (2013) (81)
- Machine learning algorithms for systematic review: reducing workload in a preclinical review of animal studies and reducing human screening error (2018) (79)
- A Walk-based Model on Entity Graphs for Relation Extraction (2018) (78)
- How to make the most of NE dictionaries in statistical NER (2008) (76)
- Extracting semantically enriched events from biomedical literature (2012) (75)
- Enhancing automatic term recognition through recognition of variation (2004) (74)
- Identifying Terms by their Family and Friends (2000) (71)
- Prioritising references for systematic reviews with RobotAnalyst: A user study (2018) (71)
- PathText: a text mining integrator for biological pathway visualizations (2010) (70)
- Automatic Learning for Semantic Collocation (1992) (67)
- Disambiguating the species of biomedical named entities using natural language parsers (2010) (66)
- Terminology-driven mining of biomedical literature (2003) (64)
- The BioLexicon: a large-scale terminological resource for biomedical text mining (2011) (63)
- Adverse drug events and medication relation extraction in electronic health records with ensemble deep learning methods (2019) (63)
- Open-domain Anatomical Entity Mention Detection (2012) (63)
- Building a high-quality sense inventory for improved abbreviation disambiguation (2010) (62)
- Normalizing biomedical terms by minimizing ambiguity and variability (2008) (62)
- Event-based text mining for biology and functional genomics (2014) (61)
- Overview of the Cancer Genetics and Pathway Curation tasks of BioNLP Shared Task 2013 (2015) (61)
- Identification of research hypotheses and new knowledge from scientific literature (2018) (60)
- Anatomical entity mention recognition at literature scale (2013) (58)
- Fast Full Parsing by Linear-Chain Conditional Random Fields (2009) (58)
- UKPMC: a full text article resource for the life sciences (2010) (57)
- Overview of the Infectious Diseases (ID) task of BioNLP Shared Task 2011 (2011) (55)
- Introduction: named entity recognition in biomedicine (2004) (54)
- Negated bio-events: analysis and identification (2013) (53)
- Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013 (2013) (53)
- Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013 (2013) (52)
- An Application and Evaluation of the C/NC-value Approach for the Automatic term Recognition of Multi-Word units in Japanese (2000) (51)
- Text Mining the History of Medicine (2016) (51)
- Term extraction using a similarity-based approach (2001) (51)
- Enhancing Search: Events and Their Discourse Context (2013) (50)
- Automatic Discovery of Term Similarities Using Pattern Mining (2002) (50)
- Meta-Knowledge Annotation of Bio-Events (2010) (50)
- Supporting systematic reviews using LDA-based document representations (2015) (49)
- Categorising Modality in Biomedical Texts (2008) (48)
- U-Compare: A modular NLP workflow construction and evaluation system (2011) (47)
- Terminology-driven literature mining and knowledge acquisition in biomedicine (2002) (47)
- Identifying contextual information for multi-word term extraction (1999) (46)
- Enriching news events with meta-knowledge information (2017) (45)
- Mining metabolites: extracting the yeast metabolome from the literature (2010) (44)
- Identification of Manner in Bio-Events (2012) (43)
- A Discriminative Candidate Generator for String Transformations (2008) (42)
- Kleio: a knowledge-enriched information retrieval system for biology (2008) (42)
- An Improved Automatic Term Recognition Method for Spanish (2009) (42)
- A method for integrating and ranking the evidence for biochemical pathways by mining reactions from text (2013) (42)
- Facilitating the Analysis of Discourse Phenomena in an Interoperable NLP Platform (2013) (42)
- Automatic Acronym Acquisition and Term Variation Management within Domain-Specific Texts (2002) (41)
- Mining opinion polarity relations of citations (2007) (40)
- Boosting drug named entity recognition using an aggregate classifier (2015) (40)
- A Term Recognition Approach to Acronym Recognition (2006) (40)
- Mining semantically related terms from biomedical literature (2006) (39)
- Detecting experimental techniques and selecting relevant documents for protein-protein interactions from biomedical literature (2011) (38)
- Accelerating the annotation of sparse named entities by dynamic sentence selection (2008) (38)
- BioLexicon: A Lexical Resource for the Biology Domain (2008) (38)
- Smart Health and Wellbeing (2013) (38)
- Trucks: a model for automatic multiword term recognition (2001) (37)
- Wide coverage biomedical event extraction using multiple partially overlapping corpora (2013) (37)
- Thalia: semantic search engine for biomedical abstracts (2018) (37)
- ASCOT: a text mining-based web-service for efficient search and assisted creation of clinical trials (2012) (37)
- Text mining resources for the life sciences (2016) (36)
- DeepEventMine: end-to-end neural nested event extraction from biomedical texts (2020) (36)
- Using Workflows to Explore and Optimise Named Entity Recognition for Chemistry (2011) (36)
- SpanEmo: Casting Multi-label Emotion Classification as Span-prediction (2021) (34)
- Thesaurus or Logical Ontology, Which One Do We Need for Text Mining? (2005) (33)
- Semi-supervised learning of causal relations in biomedical scientific discourse (2014) (33)
- Customised OCR correction for historical medical text (2015) (32)
- Comparable Study of Event Extraction in Newswire and Biomedical Domains (2014) (32)
- An ensemble of neural models for nested adverse drug events and medication extraction with subwords (2019) (32)
- A Flexible Measure of Contextual Similarity for Biomedical Terms (2004) (32)
- Proximity-Based Frameworks for Generating Embeddings from Multi-Output Data (2012) (31)
- A semi-supervised approach using label propagation to support citation screening (2017) (31)
- Automatic Terminology Management in Biomedicine (2006) (30)
- NaCTeM EventMine for BioNLP 2013 CG and PC tasks (2013) (30)
- biochem4j: Integrated and extensible biochemical knowledge through graph databases (2017) (30)
- Using text mining techniques to extract phenotypic information from the PhenoCHF corpus (2015) (30)
- The ATRACT Workbench: Automatic Term Recognition and Clustering for Terms (2001) (29)
- Using Domain-Specific Verbs for Term Classification (2003) (29)
- Using uncertainty to link and rank evidence from biomedical literature for model curation (2017) (28)
- Optimising chemical named entity recognition with pre-processing analytics, knowledge-rich features and heuristics (2015) (28)
- SciLite: a platform for displaying text-mined annotations as a means to link research articles with biological data (2017) (28)
- Risk of bias reporting in the recent animal focal cerebral ischaemia literature (2017) (28)
- BioNLP: Proceedings of the 2012 Workshop on Biomedical Natural Language Processing (2012) (28)
- Research and Advanced Technology for Digital Libraries (2017) (27)
- Natural language processing applied to mental illness detection: a narrative review (2022) (27)
- Selecting Text Features for Gene Name Classification: from Documents to Terms (2003) (27)
- Evaluating a meta-knowledge annotation scheme for bio-events (2010) (27)
- Assessing the Use of Eclipse MDE Technologies in Open-Source Software Projects (2015) (27)
- Named Entity Recognition for Bacterial Type IV Secretion Systems (2011) (27)
- BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID (2016) (27)
- Annotation and detection of drug effects in text for pharmacovigilance (2018) (26)
- An Annotation Type System for a Data-Driven NLP Pipeline (2007) (26)
- MaSTerClass: a case-based reasoning system for the classification of biomedical terms (2005) (26)
- Mining Biomedical Abstracts: What's in a Term? (2004) (25)
- Improving the Extraction of Clinical Concepts from Clinical Records (2014) (25)
- Information retrieval and natural language processing (1997) (24)
- Linguistic Knowledge Generator (1992) (24)
- A three-way perspective on scientific discourse annotation for knowledge extraction (2012) (24)
- The English Language in the Digital Age (2012) (23)
- The National Centre for Text Mining: Aims and Objectives (2005) (23)
- Text mining meets workflow: linking U-Compare with Taverna (2010) (22)
- Text-mining-assisted biocuration workflows in Argo (2014) (22)
- Revisiting Unsupervised Relation Extraction (2020) (21)
- Improving reference prioritisation with PICO recognition (2019) (21)
- Terminology-based knowledge mining for new knowledge discovery (2006) (21)
- Size (and Domain) Matters: Evaluating Semantic Word Space Representations for Biomedical Text (2012) (21)
- Adaptable, high recall, event extraction system with minimal configuration (2015) (21)
- Mining term similarities from corpora (2004) (21)
- Building a Coreference-Annotated Corpus from the Domain of Biochemistry (2011) (21)
- Biosimilar vs originator insulins: Systematic review and meta‐analysis (2018) (21)
- Cited text span identification for scientific summarisation using pre-trained encoders (2020) (20)
- Building and Evaluating Resources for Biomedical Text Mining (2008) (19)
- Descriptive document clustering via discriminant learning in a co‐embedded space of multilevel similarities (2016) (19)
- Bootstrapping a Verb Lexicon for Biomedical Information Extraction (2009) (19)
- Transformer for Graphs: An Overview from Architecture Perspective (2022) (19)
- Erratum to: Using text mining for study identification in systematic reviews: a systematic review of current approaches (2015) (19)
- Supporting the annotation of chronic obstructive pulmonary disease (COPD) phenotypes with text mining workflows (2015) (19)
- The pace of modern culture (2020) (19)
- News search using discourse analytics (2013) (18)
- Building a semantically annotated corpus for congestive heart and renal failure from clinical records and the literature (2014) (18)
- Using a Random Forest Classifier to Compile Bilingual Dictionaries of Technical Terms from Comparable Corpora (2014) (17)
- Supporting the education evidence portal via text mining (2010) (17)
- Argo: enabling the development of bespoke workflows and services for disease annotation (2016) (17)
- U-Compare bio-event meta-service: compatible BioNLP event extraction services (2011) (17)
- Combining String and Context Similarity for Bilingual Term Alignment from Comparable Corpora (2014) (17)
- A Methodology for Terminology-based Knowledge Acquisition and Integration (2002) (17)
- PubMed-Scale Event Extraction for Post-Translational Modifications, Epigenetics and Protein Structural Relations (2012) (16)
- Improving classification of Adverse Drug Reactions through Using Sentiment Analysis and Transfer Learning (2019) (16)
- Filling the Gaps Between Tools and Users: A Tool Comparator, Using Protein-Protein Interactions as an Example (2007) (16)
- U-Compare: An Integrated Language Resource Evaluation Platform Including a Comprehensive UIMA Resource Library (2010) (16)
- Acquiring contextual information for term disambiguation (1998) (15)
- Anatomical Entity Recognition with a Hierarchical Framework Augmented by External Resources (2014) (15)
- Mapping Phenotypic Information in Heterogeneous Textual Sources to a Domain-Specific Terminological Resource (2015) (15)
- Distantly Supervised Relation Extraction with Sentence Reconstruction and Knowledge Base Priors (2021) (15)
- A Machine Learning Approach to Acronym Generation (2005) (15)
- Term sense disambiguation using a domain-specific thesaurus (1998) (15)
- A Discriminative Alignment Model for Abbreviation Recognition (2008) (15)
- Using automatically learnt verb selectional preferences for classification of biomedical terms (2004) (14)
- Mining the Biomedical Literature (2015) (14)
- Morpho-syntactic Clues for Terminological Processing in Serbian (2003) (14)
- Automatic extraction of angiogenesis bioprocess from text (2011) (14)
- Deploying and sharing U-Compare workflows as web services (2013) (14)
- Evaluation of Automatic Term Recognition of Nuclear Receptors from MEDLINE (2000) (14)
- Proceedings of the ACM Ninth International Workshop on Data and Text Mining in Biomedical Informatics (2012) (14)
- Building a Bio-Event Annotated Corpus for the Acquisition of Semantic Frames from Biomedical Corpora (2008) (14)
- Chemistry-specific Features and Heuristics for Developing a CRF-based Chemical Named Entity Recogniser (2013) (14)
- COPIOUS: A gold standard corpus of named entities towards extracting species occurrence from biodiversity literature (2019) (14)
- A Cross-Lingual Similarity Measure for Detecting Biomedical Term Translations (2015) (14)
- Processing biological literature with customizable Web services supporting interoperable formats (2014) (13)
- Text mining for efficient search and assisted creation of clinical trials (2011) (13)
- Semantic Search on Digital Document Repositories based on Text Mining Results (2009) (13)
- Analysing Entity Type Variation across Biomedical Subdomains (2012) (13)
- Proceedings of BioNLP 2011 Workshop (2011) (13)
- Towards Event Extraction from Full Texts on Infectious Diseases (2010) (13)
- APLenty: annotation tool for creating high-quality datasets using active and proactive learning (2018) (13)
- Constructing a biodiversity terminological inventory (2017) (13)
- Event Frame Extraction Based on a Gene Regulation Corpus (2008) (12)
- Proceedings of the BioNLP 2009 Workshop (2009) (12)
- Making UIMA Truly Interoperable with SPARQL (2013) (12)
- Inferring appropriate eligibility criteria in clinical trial protocols without labeled data (2012) (12)
- The Value of an in-Domain Lexicon in genomics QA (2010) (12)
- Supervised Learning of Term Similarities (2002) (12)
- Recognising Discourse Causality Triggers in the Biomedical Domain (2013) (12)
- UK Institutional Repository Search: Innovation and Discovery (2009) (12)
- BioLexicon: Towards a Reference Terminological Resource in the Biomedical Domain (2008) (12)
- A Text Mining Pipeline Using Active and Deep Learning Aimed at Curating Information in Computational Neuroscience (2018) (12)
- Meta-Knowledge Annotation at the Event Level: Comparison between Abstracts and Full Papers (2012) (12)
- Quantifying the Informativeness of Similarity Measurements (2017) (12)
- Extracting terminological expressions (1996) (12)
- Pre-trained language models with domain knowledge for biomedical extractive summarization (2022) (11)
- TRUCKS : a model for automati multi (2007) (11)
- Statistical measures for terminological extraction (1995) (11)
- Enrichment and Structuring of Archival Description Metadata (2011) (11)
- Self-Tuned Descriptive Document Clustering Using a Predictive Network (2018) (11)
- A linguistic approach to terminological context clustering (1999) (11)
- The GENIA Corpus: Annotation Levels and Applications (2017) (11)
- Automatic identification of suicide notes with a transformer-based deep learning model (2021) (11)
- Multi-topic Aspects in Clinical Text Classification (2007) (11)
- Introduction to Text Mining in Biology (2006) (10)
- Text Mining for Biomedicine (2009) (10)
- Eagles, Prelimenary Recommendations on Semantic Encoding. Interim Report (1998) (10)
- Lecture Notes in Artificial Intelligence (Subseries of Lecture Notes in Computer Science): Introduction (2005) (10)
- Sentiment analysis with knowledge resource and NLP tools (2009) (10)
- A mental state Knowledge-aware and Contrastive Network for early stress and depression detection on social media (2022) (10)
- A data and analysis resource for an experiment in text mining a collection of micro-blogs on a political topic (2012) (10)
- Automatic extraction of microorganisms and their habitats from free text using text mining workflows (2011) (10)
- Bilingual term alignment from comparable corpora in English discharge summary and Chinese discharge summary (2015) (10)
- The strategic impact of META-NET on the regional, national and international level (2014) (10)
- Proactive Learning for Named Entity Recognition (2017) (9)
- Learning to recognise named entities in tweets by exploiting weakly labelled data (2016) (9)
- Predicting Sign of Depression via Using Frozen Pre-trained Models and Random Forest Classifier (2021) (9)
- EPICURE: Ensemble Pretrained Models for Extracting Cancer Mutations from Literature (2021) (9)
- Proceedings of the 45th Annual Meeting of the ACL on Interactive Poster and Demonstration Sessions (2007) (9)
- Integrated NLP Evaluation System for Pluggable Evaluation Metrics with Extensive Interoperable Toolkit (2009) (9)
- Text Mining Supporting Search for Knowledge Discovery in Diabetes (2013) (9)
- NaCTeM-UoM @ CL-SciSumm 2019 (2019) (9)
- Divide-and-Conquer: Post-User Interaction Network for Fake News Detection on Social Media (2022) (9)
- Syntactically-informed word representations from graph neural network (2020) (9)
- Interoperability and Customisation of Annotation Schemata in Argo (2014) (9)
- Clinical text classification under the Open and Closed Topic Assumptions (2009) (8)
- Automation of citation screening in pre-clinical systematic reviews (2018) (8)
- Introduction to Text Mining for Biology and Biomedicine (2006) (8)
- Proceedings of the Second International Symposium for Semantic Mining in Biomedicine (2006) (8)
- EAGLES LE3-4244 Preliminary Recommendations on Lexical Semantic Encoding Final Report (1999) (8)
- Development and Analysis of NLP Pipelines in Argo (2013) (8)
- A Text Mining-Based Framework for Constructing an RDF-Compliant Biodiversity Knowledge Repository (2015) (8)
- Something Old, Something New: Identifying Knowledge Source in Bio-events (2013) (8)
- Terminological acquaintance: The importance of contextual information in terminology (2000) (8)
- Investigating Domain-Specific Information for Neural Coreference Resolution on Biomedical Texts (2018) (8)
- Terms are not alone: term choice and choice terms (1995) (8)
- Data Visualization with Structural Control of Global Cohort and Local Data Neighborhoods (2018) (8)
- Improving search through Event-based Biomedical Text Mining (2010) (8)
- Bridging the Gap Between Scope-based and Event-based Negation/Speculation Annotations: A Bridge Not Too Far (2012) (8)
- Clustering acronyms in biomedical text for disambiguation (2006) (8)
- Pathway Curation Support as an Information Extraction Task (2011) (8)
- Paladin: an annotation tool based on active and proactive learning (2021) (7)
- Term Clustering Using a Corpus-Based Similarity Measure (2002) (7)
- A New Corpus to Support Text Mining for the Curation of Metabolites in the ChEBI Database (2018) (7)
- A Neural Model for Aggregating Coreference Annotation in Crowdsourcing (2020) (7)
- Highly scalable Text Mining - parallel tagging application (2009) (7)
- A Web-based integrated knowledge mining aid system using term-oriented Natural Language Processing (1999) (7)
- The National Centre for Text Mining: a Vision for the Future (2007) (7)
- OSSMETER: Automated Measurement and Analysis of Open Source Software (2015) (6)
- A Specialised Verb Lexicon as the Basis of Fact Extraction in the Biomedical Domain (2010) (6)
- Sharable type system design for tool inter-operability and combinatorial comparison (2008) (6)
- Anatomical Entity Recognition with Open Biomedical Ontologies (2011) (6)
- A Strategy for Annotating Clinical Records with Phenotypic Information relating to the Chronic Obstructive Pulmonary Disease (2014) (6)
- Classifying Relations for Biomedical Named Entity Disambiguation (2009) (6)
- Annotating and detecting phenotypic information for chronic obstructive pulmonary disease (2019) (6)
- Improving clinical named entity recognition in Chinese using the graphical and phonetic feature (2019) (6)
- High-Precision Semantic Search by Generating and Testing Questions. (2010) (6)
- Extending an interoperable platform to facilitate the creation of multilingual and multimodal NLP applications (2013) (6)
- Normalisation with the BRAT rapid annotation tool (2012) (6)
- Classifying Technical Terms (1999) (6)
- Extracting Gene-Disease Relations from Text to Support Biomarker Discovery (2017) (6)
- Promoting Interoperability of Resources in META-SHARE (2011) (6)
- NaCTeM at SemEval-2016 Task 1: Inferring sentence-level semantic similarity from an ensemble of complementary lexical and sentence-level features (2016) (6)
- Collaborative Development and Evaluation of Text-processing Workflows in a UIMA-supported Web-based Workbench (2012) (6)
- GenerativeRE: Incorporating a Novel Copy Mechanism and Pretrained Model for Joint Entity and Relation Extraction (2021) (5)
- The C-value / Example-based approach to the automatic recognition of multi-word terms for cross-language terminology (1998) (5)
- Sublanguage studies as the basis for computer support for multilingual communication (1990) (5)
- GenCompareSum: a hybrid unsupervised summarization method using salience (2022) (5)
- Customisable Curation Workflows in Argo (2013) (5)
- Themes in biomedical natural language processing: BioNLP08 (2008) (5)
- A method for discovering and inferring appropriate eligibility criteria in clinical trial protocols without labeled data (2013) (5)
- A hybrid approach to recognising discourse causality in the biomedical domain (2013) (5)
- Masked Transformer for Neighhourhood-aware Click-Through Rate Prediction (2022) (5)
- Learning to Classify Biomedical Terms Through Literature Mining and Genetic Algorithms (2004) (5)
- Creating and Using Domain-specific Ontologies for Terminological Applications (2000) (5)
- Women’s health in The BMJ: a data science history (2020) (5)
- What causes a causal relation? Detecting Causal Triggers in Biomedical Scientific Discourse (2013) (5)
- Event Interpretation: A Step towards Event-Centred Text Minin (2010) (5)
- GRETEL: Graph Contrastive Topic Enhanced Language Model for Long Document Extractive Summarization (2022) (5)
- Improve Chinese Clinical Named Entity Recognition Performance by Using the Graphical and Phonetic Feature (2018) (5)
- Adapting the Cluster Ranking Supervised Model to Resolve Coreferences in the Drug Literature (2011) (5)
- Identifying Personalised Treatments and Clinical Trials for Precision Medicine using Semantic Search with Thalia (2017) (5)
- Text Mining for Semantic Search in Europe PubMed Central Labs (2016) (5)
- Improving Full Text Search with Text Mining Tools (2009) (5)
- Towards Interoperabilty of European Language Resources (2011) (5)
- LitPathExplorer: a confidence‐based visual text analytics tool for exploring literature‐enriched pathway models (2018) (5)
- ChatGPT as a Factual Inconsistency Evaluator for Abstractive Text Summarization (2023) (5)
- A hybrid approach to automatic term recognition (1996) (4)
- Readability Controllable Biomedical Document Summarization (2022) (4)
- A Hybrid Approach to Compiling Bilingual Dictionaries of Medical Terms from Parallel Corpora (2014) (4)
- Evaluating a Text Mining Based Educational Search Portal (2010) (4)
- A Text Mining Framework for Accelerating the Semantic Curation of Literature (2016) (4)
- On the Evaluations of ChatGPT and Emotion-enhanced Prompting for Mental Health Analysis (2023) (4)
- Towards Data and Goal Oriented Analysis: Tool Inter-operability and Combinatorial Comparison (2008) (4)
- Imbalanced Classification Using Dictionary-based Prototypes and Hierarchical Decision Rules for Entity Sense Disambiguation (2010) (4)
- Modelling Instance-Level Annotator Reliability for Natural Language Labelling Tasks (2019) (4)
- Distributed Document and Phrase Co-embeddings for Descriptive Clustering (2017) (4)
- The Treatment of Derivational Morphology in a Multilingual Transfer-based MT System (Eurotra) (1991) (4)
- Paths for uncertainty: Exploring the intricacies of uncertainty identification for news (2018) (4)
- Developing Multilingual Text Mining Workflows in UIMA and U-Compare (2012) (4)
- HYPHEN: A flexible, hybrid method to map phenotype concept mentions to terminological resources (2018) (4)
- Almost Total Recall: Semantic Category Disambiguation Using Large Lexical Resources and Approximate (2011) (4)
- Text Mining Services to Support E-Research (2007) (4)
- Biomedical Chinese-English CLIR Using an Extended CMeSH Resource to Expand Queries (2012) (4)
- Clustering terms using the C-value method for automatic term recognition (1999) (4)
- Dealing with Data Sparsity in Drug Named Entity Recognition (2013) (4)
- Mapping anatomical related entities to human body parts based on wikipedia in discharge summaries (2019) (4)
- A Search-based Neural Model for Biomedical Nested and Overlapping Event Detection (2019) (4)
- Coreference Resolution in Full Text Articles with BERT and Syntax-based Mention Filtering (2019) (4)
- BOOTStrep Annotation Scheme: Encoding Information for Text Mining (2007) (3)
- Re: The automation of systematic reviews (2013) (3)
- Investigating Text Simplification Evaluation (2021) (3)
- Term based literature mining from biomedical texts (2002) (3)
- Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM2016) (2016) (3)
- A comparative geolocation and text mining analysis of emotions and topics during the COVID-19 Pandemic in the UK. (2022) (3)
- Construction of a Biodiversity Knowledge Repository using a Text Mining-based Framework (2016) (3)
- Selected articles from the BioNLP Shared Task 2011 (2012) (3)
- Semantic Annotation for Improved Safety in Construction Work (2020) (3)
- Reducing Lexical Ambiguity in Serbo-Croatian by Using Genetic Algorithms (2003) (3)
- A terminology management workbench for Molecular Biology. (2001) (3)
- A Deep Learning Approach to Refine the Identification of High-Quality Clinical Research Articles From the Biomedical Literature: Protocol for Algorithm Development and Validation (2021) (3)
- Improving Textual Emotion Recognition Based on Intra- and Inter-Class Variation (2021) (3)
- Three BioNLP Tools Powered by a Biological Lexicon (2009) (3)
- Towards a terminological resource for biomedical text mining (2006) (3)
- Supporting Biological Pathway Curation Through Text Mining (2016) (3)
- Neighbour Interaction based Click-Through Rate Prediction via Graph-masked Transformer (2022) (3)
- Semantically enhanced search system for historical medical archives (2015) (3)
- Adding text mining workflows as web services to the BioCatalogue (2011) (3)
- Adding structural constraints to lexically based context matching techniques (1997) (3)
- Tuning Context Features with Genetic Algorithms (2002) (2)
- Clustering Related Terms with Definitions (2008) (2)
- Design and Implementation of a Terminology-based Literature Mining and Knowledge Structuring System (2004) (2)
- Emotion-aware and Intent-controlled Empathetic Response Generation using Hierarchical Transformer Network (2022) (2)
- Towards a Better Understanding of Discourse: Integrating Multiple Discourse Annotation Perspectives Using UIMA (2013) (2)
- Augmenting the Medical Subject Headings vocabulary with semantically rich variants to improve disease mention normalisation (2015) (2)
- Generalising semantic category disambiguation with large lexical resources for fun and profit (2014) (2)
- Three BioNLP Tools Powered by the BioLexicon (2009) (2)
- NaCTeM CTD Web Services (2013) (2)
- The Role of Text Simplification Operations in Evaluation (2021) (2)
- NaCTeM Systems for BioCreative III PPI Tasks. (2010) (2)
- "Mining events from the literature for bioinformatics applications" by S. Ananiadou, P. Thompson, and R. Nawaz; with Martin Vesely as coordinator (2013) (2)
- Current trends in biomedical natural language processing : the view from computational linguistics (2008) (2)
- Parallel Text Mining for Large Text Processing (2013) (2)
- One-shot to Weakly-Supervised Relation Classification using Language Models (2021) (2)
- Dynamic Context Matching for Knowledge Acquisition from Small Corpora (1995) (2)
- Hypothesis, analysis and synthesis, it's all Greek to me (2019) (2)
- An Integrated Term-Based Corpus Query System (2003) (2)
- Incorporating linguistic information for multi-word term extraction (1999) (2)
- Biomedical text mining for semantic search and knowledge discovery (2012) (2)
- Automatic Authorship Identification (2007) (2)
- Using Random Forest to recognise translation equivalents of biomedical terms across languages (2013) (2)
- On revolutions (2020) (2)
- Tools for sublanguage based semantic knowledge acquisition from corpora (1995) (2)
- Detecting and using document structure in scientific text (2012) (2)
- Discovering Potential Drugs by Extracting Biological Activities of Natural Products (2011) (2)
- Proceedings of BioNLP 2014 (2014) (2)
- Proximity-based Graph Embeddings for Multi-label Classification (2010) (2)
- Using a Random Forest Classifier to recognise translations of biomedical terms across languages (2013) (2)
- Proceedings of the 5th International Symposium on Semantic Mining in Biomedicine (SMBM 2012) (2012) (2)
- Deploying and sharing U-Compare workflows as web services (2013) (2)
- HYPHEN (2018) (2)
- Automatic classification of technical terms using the NC-value method for term recognition (1999) (2)
- Emotion fusion for mental illness detection from social media: A survey (2022) (2)
- A Narrative Literature Review of Natural Language Processing Applied to the Occupational Exposome (2022) (2)
- Text Mining Bridging the Gap between Knowledge and Text (2016) (2)
- New Resources and Perspectives for Biomedical Event Extraction (2012) (2)
- Quantifying risk factors in medical reports with a context-aware linear model (2019) (2)
- A task oriented extension of the Chinese MeSH Concepts Hierarchy (2010) (2)
- Building Trainable Taggers in a Web-based, UIMA-Supported NLP Workbench (2012) (1)
- The Meta-knowledge of Causality in Biomedical Scientific Discourse (2014) (1)
- Enriching the legacy literature with OCR corrections and text-mined semantic metadata (2014) (1)
- Enriching news events with meta-knowledge information (2016) (1)
- BioCause: Annotating and analysing causality in the biomedical domain (2013) (1)
- Named Entity Recognition for Cancer Immunology Research Using Distant Supervision (2022) (1)
- Towards a Linguistic Treatment of Compounds in a Machine Translation Environment (1996) (1)
- DISCOVERING ROBUST EMBEDDINGS IN (DIS)SIMILARITY SPACE FOR HIGH‐DIMENSIONAL LINGUISTIC FEATURES (2014) (1)
- UoM&MMU at TSAR-2022 Shared Task: Prompt Learning for Lexical Simplification (2022) (1)
- The use of sublanguages in machine translation (1990) (1)
- NaCTeM's BioC Modules and Resources for BioCreative IV (2013) (1)
- Examining and mitigating gender bias in text emotion detection task (2022) (1)
- Generalising semantic category disambiguation with large lexical resources for fun and profit (2014) (1)
- Extracting semantically enriched events from biomedical literature (2012) (1)
- Term identification using contextual cues (1997) (1)
- Ensemble Classification of Grants using LDA-based Features (2016) (1)
- A brief survey of some current operational systems (1987) (1)
- Biomedical resources for text mining Terminologies and ontologies in biomedicine: Can text mining help? (2005) (1)
- Locating Requests among Open Source Software Communication Messages (2014) (1)
- Incorporating Zoning Information into Argument Mining from Biomedical Literature (2022) (1)
- Integrating Annotation Tools into UIMA for Interoperability (2007) (1)
- HSEarch: Semantic Search System for Workplace Accident Reports (2021) (1)
- Semi-supervised learning of causal relations in biomedical scientific discourse (2014) (1)
- Identifying Content Types of Messages Related to Open Source Software Projects (2016) (1)
- Overview of the Cancer Genetics and Pathway Curation tasks of BioNLP Shared Task 2013 (2015) (1)
- XML tag information management system: a workbench for ontology-based knowledge acquisition and integration (2002) (1)
- Developing a knowledge base on the habitats and reproductive conditions of Dipterocarps through information extraction (2017) (1)
- Towards a sublanguage-based semantic clustering algorithm (1997) (1)
- Learning Disentangled Representations of Negation and Uncertainty (2022) (1)
- A computational linguistic approach to automatic term recognition (1994) (1)
- Computational Linguistics and Intelligent Text Processing (2007) (1)
- Cluster-Level Contrastive Learning for Emotion Recognition in Conversations (2023) (1)
- RELATE: Generating a linguistically inspired Knowledge Graph for fine-grained emotion classification (2022) (1)
- Knowledge-based processing in machine translation (1993) (1)
- Comparing neural models for nested and overlapping biomedical event detection (2022) (1)
- Hypothesis, analysis and synthesis: it’s all Greek to me! (2019) (1)
- Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011 (2012) (1)
- Semi-automatic curation of chronic obstructive pulmonary disease phenotypes using Argo. (2015) (1)
- Negated bio-events: analysis and identification (2013) (1)
- EXTRACTING SECONDARY BIO‐EVENT ARGUMENTS WITH EXTRACTION CONSTRAINTS (2011) (1)
- What is text mining (2008) (1)
- Machine Translation Trends in Europe and Japan (1998) (1)
- Zero-shot Temporal Relation Extraction with ChatGPT (2023) (1)
- The potential of text mining to reduce screening workload in systematic reviews: a retrospective evaluation (2013) (1)
- Proceedings of the BioNLP 2018 workshop (2018) (1)
- NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding (2020) (1)
- Event Extraction in pieces: Tackling the partial event identification problem on unseen corpora (2015) (1)
- Computational Linguistics and Intelligent Text Processing (2011) (1)
- A connectionist approach to term recognition (1998) (1)
- Wide coverage biomedical event extraction using multiple partially overlapping corpora (2013) (1)
- SemText: A semantically enriched information retrieval system for biology (2007) (1)
- Development of bespoke machine learning and biocuration workflows in a BioC-supporting text mining workbench. (2015) (1)
- Supporting the annotation of chronic obstructive pulmonary disease (COPD) phenotypes with text mining workflows (2015) (0)
- Epsilon [e]: Tool kit for knowledge acquisition based on a hierarchy of pseudotexts (1993) (0)
- DTMBIO'11 : proceedings of the ACM fifth International Workshop on Data and Text Mining in Biomedical Informatics, October 24, 2011, Glasgow, Scotland, UK (2011) (0)
- A Survey on Biomedical Text Summarization with Pre-trained Language Model (2023) (0)
- Shardlow, Matthew and Ju, Meizhi and Li, Maolin and O’Reilly, Christian and Iavarone, Elisabetta and McNaught, John and Ananiadou, Sophia (2018)A Text Mining Pipeline Using Active and Deep Learning Aimed at Curating In- formation (2019) (0)
- Text Mining Techniques for Building a Biolexicon (2007) (0)
- Supporting Discourse Phenomena in an Interoperable NLP Framework (2013) (0)
- Mining Biomedical Terminology from Literature (2006) (0)
- DTMBIO 2011: international workshop on data and textmining in biomedical informatics (2011) (0)
- DTMBIO 2012: international workshop on data and text mining in biomedical informatics (2012) (0)
- Report on awareness, mobilisation and dissemination actions (2013) (0)
- Visualisation: mediating the interchange of information from the verbal to the visual domain (1992) (0)
- Report on methodology and criteria followed for the selection of resources (2012) (0)
- Report on second selection of resources, revising selection in D2.1 (2012) (0)
- The treatment of derivational morphology in a multilingual transfer-based machine translation system: EUROTRA (1990) (0)
- Bridging text-mined biomolecular events to pathway models using approximate subgraph matching techniques (2015) (0)
- An ontology-based disambiguation of terms (2011) (0)
- ChatGPT as a Factual Inconsistency Evaluator for Text Summarization (2023) (0)
- Compositional Enrichment of Bio-Ontologies (2008) (0)
- Computational Linguistics and Intelligent Text Processing: Second International Conference, CICLing 2001 Mexico City, Mexico, February 18–24, 2001 Proceedings (2001) (0)
- Dynamic hypertext navigation using a conceptual graph representation (1996) (0)
- Machine translation: Unfulfilled promise? (1989) (0)
- TRIGGER : activates TYPE : positive _ regulation THEME : nitrate reductase operon : operon CAUSE : narL gene product : protein Figure 1 Typical structured representation of the bio-event contained in the above sentence (2013) (0)
- Chapter I Text Mining for Biomedicine (2016) (0)
- Event-based textmining for biology and functional genomics (2015) (0)
- Cited text span identification for scientific summarisation using pre-trained encoders (2020) (0)
- Ismb/eccb 2019 Proceedings Papers Committee (2019) (0)
- Proceedings of the Second International Symposium on Semantic Mining in Biomedicine (SMBM) (2006) (0)
- A data and analysis resource for an experiment in text mining a collection of micro-Âblogs on a political topic. (2012) (0)
- A term-based and citation network-based search system for COVID-19 (2021) (0)
- DTMBIO'11 welcome by chairs (2011) (0)
- Multilingual linguistic aspects of machine translation (1991) (0)
- Unlocking knowledge in biodiversity legacy literature through automatic semantic metadata extraction (2015) (0)
- Awareness, mobilisation and dissemination actions (2012) (0)
- Dealing with data sparsity in drug-NER (2013) (0)
- Term variation as an integrated part of automatic term recognition (2001) (0)
- BioNLP 2010: Year in review (2010) (0)
- Keynote: Supporting evidence-based medicine using text mining (2014) (0)
- Towards automatic term recognition (1995) (0)
- Investigating Approaches to Semantic Category Disambiguation Using Large Lexical Resources and Appro (2011) (0)
- Statistical approaches for collocation extraction and term recognition. (1995) (0)
- Community Platform for Pathway Model Building (2009) (0)
- Sustainability strategy and plans beyond the end of the project (2013) (0)
- Emotions and Topics Expressed on Twitter During the COVID-19 Pandemic in the United Kingdom: Comparative Geolocation and Text Mining Analysis (2022) (0)
- Present and future contributions of the Eurotra project to languages for special purposes (1986) (0)
- The pace of modern culture (2020) (0)
- Spotting and Discovering Terms through Natural Language Processing Christian Jacquemin (University of Paris 11) Cambridge, MA: The MIT Press, 2001, viii+378 pp; hardbound, ISBN 0-262-10085-1, $52.95, £36.50 (2002) (0)
- On revolutions (2020) (0)
- Spotting and Discovering Terms through Natural Language Processing by Christian Jacquemin (2002) (0)
- Polarity Relations of Citations (2006) (0)
- Mapping anatomical related entities to human body parts based on wikipedia in discharge summaries (2019) (0)
- Repository Aligning Pathology Assessment in a Learner-Centered Undergraduate Medical Curriculum (2017) (0)
- Natural Language Processing for Biomedicine (2021) (0)
- The strategic impact of META-NET on the regional, national and international level (2016) (0)
- Role of in silico tools and text mining in the risk assessment of selected alkaloids (2018) (0)
- Domain-specific Continued Pretraining of Language Models for Capturing Long Context in Mental Health (2023) (0)
- Text Classification and Prediction in the Legal Domain (2022) (0)
- Context information for the extraction of terms (1997) (0)
- Extending a Tool Resource Framework with U-Compare (2011) (0)
- Span-based Named Entity Recognition by Generating and Compressing Information (2023) (0)
- Term recognition for information retrieval and information extraction (1997) (0)
- Poster: Analysis of gene ranking algorithms with extraction of relevant biomedical concepts from PubMed publications (2011) (0)
- Adapting ChER for the recognition of chemical mentions in patents (2015) (0)
- Ontology based Semantic Annotation for Knowledge Extraction (2006) (0)
- Knowledge Graph Enrichment of a Semantic Search System for Construction Safety (2022) (0)
- S-490 Exposome methods in occupational epidemiology: Use of text mining for developing Job Exposure Matrices (2021) (0)
- Biological event recognition with textual induction (2009) (0)
- Systematic knowledge elicitation from natural language texts (1994) (0)
- A Genetic Algorithm Approach to Unsupervised Learning of Context Features (2002) (0)
- A sublanguage approach to automatic term recognition (1993) (0)
- BioVAE: a pre-trained latent variable language model for biomedical text mining (2021) (0)
- Connecting Text Mining and Pathways using the PathText Resource (2008) (0)
- Extracting Semantically Enriched Events from the Literature (2012) (0)
- Bilingual term alignment from comparable corpora in English discharge summary and Chinese discharge summary (2015) (0)
- 5Ws: What Went Wrong With Word embeddings (2017) (0)
- Treatment of compounds in a transfer-based MT system (1990) (0)
- Neural architectures for aggregating sequence labels from multiple annotators (2022) (0)
- AGRA: analysis of gene ranking algorithms (2011) (0)
- CitationSum: Citation-aware Graph Contrastive Learning for Scientific Paper Summarization (2023) (0)
- DTMBIO'12 welcome by chairs (2012) (0)
- A Text Mining Pipeline Using Active and Deep Learning Aimed at Curating Information in Computational Neuroscience (2018) (0)
- Working Paper 63 (2018) (0)
- An Integrated System for Ontology-based Knowledge Structuring and Discovery (2002) (0)
- Data and text mining Learning string similarity measures for gene / protein name dictionary look-up using logistic regression (2007) (0)
- Thalia User manual (2018) (0)
- Adverse Drug Events and Medication Relation Extraction in EHRs with Ensemble Deep Learning Methods (2019) (0)
- Report on first selection of resources (2011) (0)
- Contextualized medication event extraction with levitated markers. (2023) (0)
- Supporting Frame Analysis using Text Mining (2009) (0)
- Cross-Platform Text Mining and Natural Language Processing Interoperability - Proceedings of the LREC2016 conference (2016) (0)
- Proceedings of BioNLP 15 (2015) (0)
- Towards interaction during transfer (1991) (0)
- LBMT, KBMT, SBMT and EBMT: An attempt at integration (1993) (0)
- Adaptable, high recall, event extraction system with minimal configuration (2015) (0)
- Comparing neural models for nested and overlapping biomedical event detection (2022) (0)
- Book review (2004) (0)
- Role of in silico tools and text mining in the safety assessment of selected plant coumarins (2017) (0)
- The Impact of Knowledge Engineering on the Training of Terminologists (1988) (0)
- A Novel Automated Approach to Mutation-Cancer Relation Extraction by Incorporating Heterogeneous Knowledge (2022) (0)
- Nawaz, Raheel and Thompson, Paul and Ananiadou, Sophia (2010)Evalu- ating a meta-knowledge annotation scheme for bio-events. In: Workshop on Negation and Speculation in Natural Language Processing (NeSp-ACL (2019) (0)
- ASCOT: assisting search and creation of clinical trials (2012) (0)
- ASSIST: Education Evidence Portal (2009) (0)
- Towards Event-based Discourse Analysis of Biomedical Text (2013) (0)
- A visualisation architecture based on the systematicity of language (1992) (0)
- BiLSTM Classifier Bilateral optic neuropathy due ethambutol isoniazid and treatment N iterations Document sentences Sentence Encoding Layer Inference LayerGraph (2019) (0)
- 2017 Reviewer Acknowledgment (2018) (0)
- Time-sensitive inventory of medical terminology (2016) (0)
- Pathway Curation (PC) task at BioNLP Shared Task 2013 Task Proposal (2012) (0)
- 2010 TCBB Reviewers List (2011) (0)
- stav: text annotation visualiser (2012) (0)
- Facilitating and promoting web annotation with Argo (2016) (0)
- Classifying suicide-related content and emotions on Twitter using Graph Convolutional Neural Networks (2022) (0)
- PathText: Text Mining Tools Integrated with Biological Pathway (2008) (0)
- A natural language approach to information retrieval (1997) (0)
- A text mining-based approach to graph database curation in support of metabolic pathway reconstruction (2017) (0)
- Introduction (Thematic Session: Text Mining in Biomedicine) (2004) (0)
- C-value for Authorship Identification (2007) (0)
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