Stephen Spiro
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Physics
Stephen Spiro's Degrees
- PhD Physics University of California, Berkeley
- Masters Physics Stanford University
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(Suggest an Edit or Addition)Stephen Spiro's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover. (2006) (547)
- Functional, biochemical and genetic diversity of prokaryotic nitrate reductases (2001) (414)
- FNR and its role in oxygen-regulated gene expression in Escherichia coli. (1990) (320)
- A non-haem iron centre in the transcription factor NorR senses nitric oxide (2005) (279)
- FNR and its role in oxygen-regulated gene expression in Escherichia coli (1990) (223)
- The yjeB (nsrR) Gene of Escherichia coli Encodes a Nitric Oxide-Sensitive Transcriptional Regulator (2006) (216)
- Regulators of bacterial responses to nitric oxide. (2007) (195)
- Adaptive responses to oxygen limitation in Escherichia coli. (1991) (179)
- Soil and sediment bacteria capable of aerobic nitrate respiration (1995) (172)
- The FNR Modulon and FNR-Regulated Gene Expression (1996) (169)
- FNR‐dependent repression of the ndh gene of Escherichia coli and metal ion requirement for FNR‐regulated gene expression (1989) (138)
- NsrR targets in the Escherichia coli genome: new insights into DNA sequence requirements for binding and a role for NsrR in the regulation of motility (2009) (136)
- The NsrR Regulon of Escherichia coli K-12 Includes Genes Encoding the Hybrid Cluster Protein and the Periplasmic, Respiratory Nitrite Reductase (2007) (135)
- Nitric oxide in bacteria: synthesis and consumption. (1999) (133)
- Regulation and over-expression of the fnr gene of Escherichia coli. (1987) (128)
- The NorR Protein of Escherichia coli Activates Expression of the Flavorubredoxin Gene norV in Response to Reactive Nitrogen Species (2002) (119)
- The purification of ammonia monooxygenase from Paracoccus denitrficans (1996) (115)
- A combination of cytochrome c nitrite reductase (NrfA) and flavorubredoxin (NorV) protects Salmonella enterica serovar Typhimurium against killing by NO in anoxic environments. (2008) (110)
- Nitrous oxide production and consumption: regulation of gene expression by gas-sensitive transcription factors (2012) (104)
- Inactivation of the FNR protein of Escherichia coli by targeted mutagenesis in the N‐terminal region (1988) (104)
- Detection of genes for periplasmic nitrate reductase in nitrate respiring bacteria and in community DNA. (1999) (100)
- Two Conserved Glutamates in the Bacterial Nitric Oxide Reductase Are Essential for Activity but Not Assembly of the Enzyme (2001) (96)
- Nitrite and nitric oxide reduction in Paracoccus denitrificans is under the control of NNR, a regulatory protein that belongs to the FNR family of transcriptional activators (1995) (94)
- A low-redox potential heme in the dinuclear center of bacterial nitric oxide reductase: implications for the evolution of energy-conserving heme-copper oxidases. (1999) (91)
- Purification of hydroxylamine oxidase from Thiosphaera pantotropha (1993) (91)
- Activation of the lac Operon of Escherichia coli by a mutant FNR protein (1987) (90)
- Interconversion of the DNA‐binding specificities of two related transcription regulators, CRP and FNR (1990) (84)
- Nitric Oxide Is a Signal for NNR-Mediated Transcription Activation in Paracoccus denitrificans (1999) (77)
- The diversity of redox proteins involved in bacterial heterotrophic nitrification and aerobic denitrification. (1998) (75)
- Vibrio fischeri flavohaemoglobin protects against nitric oxide during initiation of the squid–Vibrio symbiosis (2010) (74)
- The FNR family of transcriptional regulators (2004) (74)
- Characterization of a nitrate-respiring bacterial community using the nitrate reductase gene (narG) as a functional marker. (2003) (65)
- The identification of a periplasmic nitrate reductase in Paracoccus denitrificans (1993) (61)
- DNA Binding Activity of the Escherichia coli Nitric Oxide Sensor NorR Suggests a Conserved Target Sequence in Diverse Proteobacteria (2004) (61)
- Effect of carbon substrate and aeration on nitrate reduction and expression of the periplasmic and membrane-bound nitrate reductases in carbon-limited continuous cultures of Paracoccus denitrificans Pd1222. (1997) (53)
- Detection of genes for membrane-bound nitrate reductase in nitrate-respiring bacteria and in community DNA. (2000) (52)
- Heterologous NNR-Mediated Nitric Oxide Signaling inEscherichia coli (2000) (50)
- Analysis of the Nitric Oxide-sensing Non-heme Iron Center in the NorR Regulatory Protein* (2008) (48)
- Point mutations in the DNA- and cNMP-binding domains of the homologue of the cAMP receptor protein (CRP) in Mycobacterium bovis BCG: implications for the inactivation of a global regulator and strain attenuation. (2005) (48)
- The ferric uptake regulator of Pseudomonas aeruginosa has no essential cysteine residues and does not contain a structural zinc ion. (2002) (48)
- Mechanism of transcriptional regulation by the Escherichia coli nitric oxide sensor NorR. (2006) (44)
- Escherichia coli cytochrome c nitrite reductase NrfA. (2008) (44)
- Nitric oxide-sensing mechanisms in Escherichia coli. (2006) (42)
- The biochemical characterization of a novel non-haem-iron hydroxylamine oxidase from Paracoccus denitrificans GB17. (1996) (42)
- Isolation of intact FNR protein (Mr 30 000) of Escherichia coli (1990) (40)
- Construction of a whole-cell gene reporter for the fluorescent bioassay of nitrate. (2004) (39)
- Escherichia coli NsrR Regulates a Pathway for the Oxidation of 3-Nitrotyramine to 4-Hydroxy-3-Nitrophenylacetate (2008) (39)
- Heterologous expression of heterotrophic nitrification genes. (1997) (38)
- Detoxification of nitric oxide by the flavorubredoxin of Salmonella enterica serovar Typhimurium. (2005) (37)
- Identification of an assimilatory nitrate reductase in mutants of Paracoccus denitrificans GB17 deficient in nitrate respiration (1997) (36)
- Transcription factor NNR from Paracoccus denitrificans is a sensor of both nitric oxide and oxygen: isolation of nnr* alleles encoding effector-independent proteins and evidence for a haem-based sensing mechanism. (2006) (36)
- Influence of metal ions and organic carbons on denitrification activity of the halotolerant bacterium, Paracoccus pantotrophus P16 a strain from shrimp pond (2009) (34)
- Transcription Factor FnrP from Paracoccus denitrificans Contains an Iron-Sulfur Cluster and Is Activated by Anoxia: Identification of Essential Cysteine Residues (2002) (33)
- Genome-wide identification of binding sites for the nitric oxide-sensitive transcriptional regulator NsrR. (2008) (33)
- Spectral Properties of Bacterial Nitric-oxide Reductase (2002) (31)
- Characterization of the expression and activity of the periplasmic nitrate reductase of Paracoccus pantotrophus in chemostat cultures. (2003) (26)
- Down-Regulation of the Escherichia coli K-12 nrf Promoter by Binding of the NsrR Nitric Oxide-Sensing Transcription Repressor to an Upstream Site (2010) (25)
- Stability of a 24‐meric homopolymer: Comparative studies of assembly‐defective mutants of Rhodobacter capsulatus bacterioferritin and the native protein (2003) (25)
- The nitric oxide regulated nor promoter of Paracoccus denitrificans. (2000) (21)
- Cooperative and allosterically controlled nucleotide binding regulates the DNA binding activity of NrdR (2013) (20)
- Sensory Mechanisms in Bacteria Molecular Aspects of Signal Recognition (2010) (20)
- Genome-wide analysis of the response to nitric oxide in uropathogenic Escherichia coli CFT073 (2015) (19)
- Protein-template-driven formation of polynuclear iron species. (2004) (19)
- Anaerobic Growth of Paracoccus denitrificans Requires Cobalamin: Characterization ofcobK and cobJ Genes (1999) (19)
- An FNR-dependent promoter from Escherichia coli is active and anaerobically inducible in Paracoccus denitrificans. (1992) (19)
- Hydroxylamine oxidation in heterotrophic nitrate-reducing soil bacteria and purification of a hydroxylamine-cytochrome c oxidoreductase from a Pseudomonas species (1996) (19)
- Characterization of the nitric oxide-reactive transcriptional activator NorR. (2008) (18)
- DNA binding properties of the Escherichia coli nitric oxide sensor NorR: towards an understanding of the regulation of flavorubredoxin expression. (2005) (18)
- Identification of periplasmic nitrate reductase Mo(V) EPR signals in intact cells of Paracoccus denitrificans. (1995) (16)
- Finely Tuned Regulation of the Aromatic Amine Degradation Pathway in Escherichia coli (2013) (16)
- Non-heme iron sensors of reactive oxygen and nitrogen species. (2012) (16)
- Isolation and characterisation of a strain of Pseudomonas putida that can express a periplasmic nitrate reductase (1995) (15)
- Metalloregulatory proteins and nitric oxide signalling in bacteria. (2008) (15)
- Altered voltage sensitivity of mutant OmpC porin channels (1996) (14)
- Environmental and Genetic Determinants of Biofilm Formation in Paracoccus denitrificans (2017) (13)
- Sensing and Responding to Reactive Oxygen and Nitrogen Species (2011) (9)
- An alternative route to nitric oxide resistance (2010) (8)
- Inefficient translation of nsrR constrains behaviour of the NsrR regulon in Escherichia coli. (2015) (8)
- Regulation of Gene Expression by Oxygen in Escherichia coli (1990) (8)
- Hydroxylamine oxidation in heterotrophic nitrate-reducing soil bacteria and purification of a hydroxylamine-cytochromec oxidoreductase from aPseudomonas species (2004) (7)
- Isolation, characterisation and expression of the bacterioferritin gene of Rhodobacter capsulatus (1996) (7)
- A proposal for the DNA-binding specificity of the FNR protein of Escherichia coli (1988) (6)
- Regulation of fnr gene expression in Escherichia coli and over-production of the FNR protein (1987) (6)
- Isolation, characterisation and expression of the bacterioferritin gene of Rhodobacter capsulatus. (1996) (5)
- Respiratory inhibitors activate an Fnr-like regulatory protein in Paracoccus denitrificans: implications for the regulation of the denitrification pathway. (1994) (5)
- The bacterial nitrate reductases (1998) (5)
- Genome-wide mapping of the binding sites of proteins that interact with DNA. (2012) (4)
- Spectral properties of bacterial nitric oxide reductase (2002) (4)
- Another target for NO. (2011) (4)
- Nitric oxide stress in Escherichia coli and Salmonella. (2011) (4)
- P010. The nitric oxide response of Escherichia coli (2006) (3)
- Heterotrophic nitrification in Paracoccus denitrificans. (1998) (3)
- Genome-wide analysis of the response to nitric oxide in uropathogenic Escherichia coli CFT 073 (2015) (2)
- Editorial Board (2012) (2)
- CHAPTER 13: Regulation of Denitrification (2016) (2)
- Iron-sulphur cluster-based sensors. (2010) (1)
- Faculty Opinions recommendation of Discovery of a Novel Nitric Oxide Binding Protein and Nitric-Oxide-Responsive Signaling Pathway in Pseudomonas aeruginosa. (2017) (1)
- Interactions of heme and other metal ion complexes with the bacterial Fe‐uptake regulatory protein and with bacterioferritin (2008) (1)
- Faculty Opinions recommendation of Redox control of the DNA damage-inducible protein DinG helicase activity via its iron-sulfur cluster. (2009) (0)
- Faculty Opinions recommendation of Algal photosynthesis converts nitric oxide into nitrous oxide. (2020) (0)
- Faculty Opinions recommendation of Calling on a million minds for community annotation in WikiProteins. (2008) (0)
- Faculty Opinions recommendation of Identification of a quinone-sensitive redox switch in the ArcB sensor kinase. (2004) (0)
- Faculty Opinions recommendation of Insights into signal transduction involving PAS domain oxygen-sensing heme proteins from the X-ray crystal structure of Escherichia coli Dos heme domain (Ec DosH). (2004) (0)
- homologs, ppGpp and RegAB regulate dissimilatory nitrogen metabolism in 4 Paracoccus denitrificans (0)
- Faculty Opinions recommendation of Engineered bacteriophages for treatment of a patient with a disseminated drug-resistant Mycobacterium abscessus. (2019) (0)
- Faculty Opinions recommendation of Mechanistic insight into the nitrosylation of the [4Fe-4S] cluster of WhiB-like proteins. (2011) (0)
- DksA, ppGpp, and RegAB Regulate Nitrate Respiration in Paracoccus denitrificans (2023) (0)
- Ferguson Identification of an assimilatory nitrate reductase in mutants of Paracoccus denitrificans GB 17 deficient in nitrate respiration (0)
- Editorial Board (2013) (0)
- Faculty Opinions recommendation of Anaerobic endosymbiont generates energy for ciliate host by denitrification. (0)
- 9:20 Determining the Effect of Various Parameters on Tensile Properties of Carbon Nanotubes Srikar Yalam and Ali Aliev 9:30 Temperature-driven Polymer Artificial Muscles for Morphing Structures (2022) (0)
- Faculty Opinions recommendation of Rapid ultrasensitive detection platform for antimicrobial susceptibility testing. (2019) (0)
- Faculty of 1000 evaluation for Deleting the IF1-like ζ subunit from Paracoccus denitrificans ATP synthase is not sufficient to activate ATP hydrolysis. (2018) (0)
- Faculty Opinions recommendation of Phenotypic landscape of a bacterial cell. (2011) (0)
- Faculty Opinions recommendation of Molecular mechanism of anaerobic ammonium oxidation. (2011) (0)
- Transcriptional regulation of denitrification genes in Paracoccus denitrificans. (1995) (0)
- Faculty Opinions recommendation of Nitric oxide regulation of cyclic di-GMP synthesis and hydrolysis in Shewanella woodyi. (2012) (0)
- Faculty Opinions recommendation of Oxygen and nitrogen production by an ammonia-oxidizing archaeon. (2022) (0)
- Faculty Opinions recommendation of Engineering ligand-specific biosensors for aromatic amino acids and neurochemicals. (2021) (0)
- Faculty Opinions recommendation of Redefining fundamental concepts of transcription initiation in bacteria. (2020) (0)
- Faculty Opinions recommendation of A transcriptional response to singlet oxygen, a toxic byproduct of photosynthesis. (2005) (0)
- CRU Sulphur 2019 – AI in sulfur recovery – Integration of analyzers to achieve tighter control (2019) (0)
- Faculty Opinions recommendation of DNA-mediated redox signaling for transcriptional activation of SoxR. (2009) (0)
- Faculty Opinions recommendation of CGFS-type monothiol glutaredoxins from the cyanobacterium Synechocystis PCC6803 and other evolutionary distant model organisms possess a glutathione-ligated [2Fe-2S] cluster. (2007) (0)
- Faculty Opinions recommendation of Studies of the distribution of Escherichia coli cAMP-receptor protein and RNA polymerase along the E. coli chromosome. (2005) (0)
- Faculty Opinions recommendation of Adaptive response of Yersinia pestis to extracellular effectors of innate immunity during bubonic plague. (2006) (0)
- Faculty Opinions recommendation of Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain. (2004) (0)
- An alternative route to nitric oxide resistancemmi (2010) (0)
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