Stuart C. Ray
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American academic and physician
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Why Is Stuart C. Ray Influential?
(Suggest an Edit or Addition)According to Wikipedia, Stuart C. Ray is an American physician. He is Vice Chair of Medicine for Data Integrity and Analytics, Associate Director of the Infectious Diseases Fellowship Training Program at the Johns Hopkins School of Medicine, and a Professor in the Department of Medicine, Division of Infectious Diseases. Ray also holds appointments in Viral Oncology and the Division of Health Sciences Informatics. He is affiliated with the Institute for Computational Medicine at Johns Hopkins and is licensed to practice medicine in Maryland.
Stuart C. Ray's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Full-Length Human Immunodeficiency Virus Type 1 Genomes from Subtype C-Infected Seroconverters in India, with Evidence of Intersubtype Recombination (1999) (2454)
- Determinants of Viral Clearance and Persistence during Acute Hepatitis C Virus Infection (2001) (1261)
- Immune evasion by hepatitis C virus NS3/4A protease-mediated cleavage of the Toll-like receptor 3 adaptor protein TRIF. (2005) (1156)
- Protection against persistence of hepatitis C (2002) (471)
- Residual Human Immunodeficiency Virus Type 1 Viremia in Some Patients on Antiretroviral Therapy Is Dominated by a Small Number of Invariant Clones Rarely Found in Circulating CD4+ T Cells (2006) (403)
- Intermittent HIV-1 viremia (Blips) and drug resistance in patients receiving HAART. (2005) (389)
- Genetic epidemiology of hepatitis C virus throughout egypt. (2000) (385)
- Spontaneous control of primary hepatitis C virus infection and immunity against persistent reinfection. (2010) (348)
- Cellular immune selection with hepatitis C virus persistence in humans (2005) (324)
- Human immunodeficiency virus-related microbial translocation and progression of hepatitis C. (2008) (278)
- Comprehensive analyses of CD8+ T cell responses during longitudinal study of acute human hepatitis C (2005) (255)
- Selection pressure from neutralizing antibodies drives sequence evolution during acute infection with hepatitis C virus. (2009) (243)
- Prospective evaluation of community-acquired acute-phase hepatitis C virus infection. (2005) (238)
- HIV-1 drug resistance profiles in children and adults with viral load of <50 copies/ml receiving combination therapy. (2001) (229)
- Genotypic analysis of HIV-1 drug resistance at the limit of detection: virus production without evolution in treated adults with undetectable HIV loads. (2004) (227)
- Clearance of hepatitis C infection is associated with the early appearance of broad neutralizing antibody responses (2014) (223)
- Acute Hepatitis C Virus Structural Gene Sequences as Predictors of Persistent Viremia: Hypervariable Region 1 as a Decoy (1999) (217)
- Humoral immune response in acute hepatitis C virus infection. (2005) (208)
- Divergent and convergent evolution after a common-source outbreak of hepatitis C virus (2005) (204)
- A stable latent reservoir for HIV-1 in resting CD4(+) T lymphocytes in infected children. (2000) (182)
- Cross-Genotype Immunity to Hepatitis C Virus (2004) (177)
- G→A Hypermutation in Protease and Reverse Transcriptase Regions of Human Immunodeficiency Virus Type 1 Residing in Resting CD4+ T Cells In Vivo (2005) (173)
- Neutralizing Antibodies Do Not Mediate Suppression of Human Immunodeficiency Virus Type 1 in Elite Suppressors or Selection of Plasma Virus Variants in Patients on Highly Active Antiretroviral Therapy (2006) (172)
- Expanded cellular clones carrying replication-competent HIV-1 persist, wax, and wane (2018) (169)
- Acute hepatitis C (2008) (166)
- Persistence of Wild-Type Virus and Lack of Temporal Structure in the Latent Reservoir for Human Immunodeficiency Virus Type 1 in Pediatric Patients with Extensive Antiretroviral Exposure (2002) (135)
- Needlestick transmission of hepatitis C. (2002) (133)
- High-Programmed Death-1 Levels on Hepatitis C Virus-Specific T Cells during Acute Infection Are Associated with Viral Persistence and Require Preservation of Cognate Antigen during Chronic Infection1 (2008) (129)
- The Role of Viral Introductions in Sustaining Community-Based HIV Epidemics in Rural Uganda: Evidence from Spatial Clustering, Phylogenetics, and Egocentric Transmission Models (2014) (125)
- Prospective Characterization of Full-Length Hepatitis C Virus NS5A Quasispecies during Induction and Combination Antiviral Therapy (2000) (124)
- Control of HIV-1 in Elite Suppressors despite Ongoing Replication and Evolution in Plasma Virus (2010) (122)
- Determinants of the quantity of hepatitis C virus RNA. (2000) (116)
- Analysis of genetic linkage of HIV from couples enrolled in the HIV Prevention Trials Network 052 trial. (2011) (116)
- Continued Production of Drug-Sensitive Human Immunodeficiency Virus Type 1 in Children on Combination Antiretroviral Therapy Who Have Undetectable Viral Loads (2004) (110)
- Transmission of Human Immunodeficiency Virus Type 1 from a Patient Who Developed AIDS to an Elite Suppressor (2008) (104)
- Broadly neutralizing antibodies with few somatic mutations and hepatitis C virus clearance. (2017) (99)
- Comprehensive genetic and epigenetic analysis of occult hepatitis B from liver tissue samples. (2008) (89)
- Use of laser capture microdissection to map hepatitis C virus-positive hepatocytes in human liver. (2013) (82)
- Spontaneous clearance of primary acute hepatitis C virus infection correlated with high initial viral RNA level and rapid HVR1 evolution (2012) (80)
- Acceleration of Hepatitis C Virus Envelope Evolution in Humans Is Consistent with Progressive Humoral Immune Selection during the Transition from Acute to Chronic Infection (2010) (78)
- Naturally selected hepatitis C virus polymorphisms confer broad neutralizing antibody resistance. (2015) (75)
- Hypervariable Region 1 Sequence Stability during Hepatitis C Virus Replication in Chimpanzees (2000) (73)
- Convergent evolution within the V3 loop domain of human immunodeficiency virus type 1 in association with disease progression (1995) (72)
- Genome Sequencing and Analysis of Geographically Diverse Clinical Isolates of Herpes Simplex Virus 2 (2015) (67)
- Broadly Neutralizing Antibody Mediated Clearance of Human Hepatitis C Virus Infection. (2018) (66)
- Early archiving and predominance of nonnucleoside reverse transcriptase inhibitor-resistant HIV-1 among recently infected infants born in the United States. (2007) (66)
- Hepatitis C virus infection of neuroepithelioma cell lines. (2010) (64)
- Slow human immunodeficiency virus type 1 evolution in viral reservoirs in infants treated with effective antiretroviral therapy. (2007) (62)
- Healthy donor T-cell responses to common cold coronaviruses and SARS-CoV-2. (2020) (59)
- Kupffer cells are depleted with HIV immunodeficiency and partially recovered with antiretroviral immune reconstitution (2009) (57)
- Identification of Ongoing Human Immunodeficiency Virus Type 1 (HIV-1) Replication in Residual Viremia during Recombinant HIV-1 Poxvirus Immunizations in Patients with Clinically Undetectable Viral Loads on Durable Suppressive Highly Active Antiretroviral Therapy (2009) (53)
- Molecular Epidemiology of HIV-1 Subtypes in Southern China (2005) (53)
- PCR Detection of Adenovirus in a Bone Marrow Transplant Recipient: Hemorrhagic Cystitis as a Presenting Manifestation of Disseminated Disease (1999) (51)
- Inferring Viral Dynamics in Chronically HCV Infected Patients from the Spatial Distribution of Infected Hepatocytes (2014) (48)
- Human Immunodeficiency Virus Seroconversion and Evolution of the Hepatitis C Virus Quasispecies (2001) (47)
- High diversity of hepatitis C viral quasispecies is associated with early virological response in patients undergoing antiviral therapy (2009) (47)
- CMPK2 and BCL-G are associated with type 1 interferon–induced HIV restriction in humans (2018) (46)
- A sensitive genotyping assay for detection of drug resistance mutations in reverse transcriptase of HIV-1 subtypes B and C in samples stored as dried blood spots or frozen RNA extracts. (2006) (46)
- Durable SARS-CoV-2 B cell immunity after mild or severe disease (2020) (43)
- Synergistic anti-HCV broadly neutralizing human monoclonal antibodies with independent mechanisms (2017) (43)
- A Novel Assay Allows Genotyping of the Latent Reservoir for Human Immunodeficiency Virus Type 1 in the Resting CD4+ T Cells of Viremic Patients (2005) (42)
- Identification of nevirapine-resistant HIV-1 in the latent reservoir after single-dose nevirapine to prevent mother-to-child transmission of HIV-1. (2009) (42)
- Dynamics of SEN virus infection among injection drug users. (2001) (42)
- Evolution of the HIV-1 nef gene in HLA-B*57 Positive Elite Suppressors (2010) (42)
- Presence in India of HIV type 1 similar to North American strains. (1994) (40)
- Extra-epitopic hepatitis C virus polymorphisms confer resistance to broadly neutralizing antibodies by modulating binding to scavenger receptor B1 (2017) (40)
- Assessment of Hepatitis C Virus Sequence Complexity by Electrophoretic Mobilities of Both Single-and Double-Stranded DNAs (1998) (40)
- Global Diversity within and between Human Herpesvirus 1 and 2 Glycoproteins (2015) (39)
- IgM autoantibodies recognizing ACE2 are associated with severe COVID-19 (2020) (34)
- Hepatitis C virus epitope exposure and neutralization by antibodies is affected by time and temperature. (2012) (33)
- Analysis of HIV diversity using a high-resolution melting assay. (2010) (33)
- CD4+ T cell depletion in an untreated HIV type 1-infected human leukocyte antigen-B*5801-positive patient with an undetectable viral load. (2008) (33)
- Accurate Representation of the Hepatitis C Virus Quasispecies in 5.2-Kilobase Amplicons (2004) (32)
- Progression of Fibrosis during Chronic Hepatitis C Is Associated with Rapid Virus Evolution (2007) (32)
- Genomic diversity of SARS-CoV-2 during early introduction into the Baltimore–Washington metropolitan area (2021) (29)
- Immunogenicity and Cross-Reactivity of a Representative Ancestral Sequence in Hepatitis C Virus Infection (2012) (29)
- Analyses of HIV-1 drug-resistance profiles among infected adolescents experiencing delayed antiretroviral treatment switch after initial nonsuppressive highly active antiretroviral therapy. (2008) (26)
- Epidemiology of hepatitis C virus infection & liver disease among injection drug users (IDUs) in Chennai, India (2010) (26)
- Predominance of defective proviral sequences in an HIV + long-term non-progressor. (1996) (26)
- Plasma deconvolution identifies broadly neutralizing antibodies associated with hepatitis C virus clearance. (2019) (26)
- Durable SARS-CoV-2 B cell immunity after mild or severe disease. (2021) (25)
- Constraints on Viral Evolution during Chronic Hepatitis C Virus Infection Arising from a Common-Source Exposure (2012) (24)
- Acute Hepatitis C Virus Infection Induces Consistent Changes in Circulating MicroRNAs That Are Associated with Nonlytic Hepatocyte Release (2015) (24)
- Maternal neutralizing antibody and transmission of hepatitis C virus to infants. (2008) (24)
- A Hepatitis C Virus Envelope Polymorphism Confers Resistance to Neutralization by Polyclonal Sera and Broadly Neutralizing Monoclonal Antibodies (2016) (23)
- Hepatitis C virus resistance to broadly neutralizing antibodies measured using replication-competent virus and pseudoparticles. (2016) (23)
- Computational Reconstruction of Bole1a, a Representative Synthetic Hepatitis C Virus Subtype 1a Genome (2012) (22)
- Hepatitis C Virus Immune Escape via Exploitation of a Hole in the T Cell Repertoire1 (2008) (22)
- Characterization of a polyclonal cytolytic T lymphocyte response to human immunodeficiency virus in persons without clinical progression. (1997) (22)
- No evidence of SARS-CoV-2 reverse transcription and integration as the origin of chimeric transcripts in patient tissues (2021) (21)
- The transhepatic endotoxin gradient is present despite liver cirrhosis and is attenuated after transjugular portosystemic shunt (TIPS). (2011) (21)
- CD4+ T-Cell-Dependent Reduction in Hepatitis C Virus-Specific Neutralizing Antibody Responses After Coinfection With Human Immunodeficiency Virus. (2015) (20)
- Genomic Diversity of SARS-CoV-2 During Early Introduction into the United States National Capital Region (2020) (19)
- Laser captured hepatocytes show association of butyrylcholinesterase gene loss and fibrosis progression in hepatitis C‐infected drug users (2012) (17)
- Sex and the genetic diversity of HIV-1 (2000) (17)
- Characterization of novel recombinant HIV-1 genomes using the branching index. (2003) (17)
- An Update on SARS-CoV-2 Diversity in the United States National Capital Region: Evolution of Novel and Variants of Concern. (2021) (16)
- Antiretroviral therapy, interferon sensitivity, and virologic setpoint in human immunodeficiency virus/hepatitis C virus coinfected patients (2014) (16)
- Human immunodeficiency virus type 1 env and p17gag sequence variation in polymerase chain reaction-positive, seronegative injection drug users. (1995) (15)
- Genetic Divergence of Hepatitis C Virus: The Role of HIV-Related Immunosuppression (2008) (14)
- Molecular epidemiology of HIV type 1 in Singapore and identification of novel CRF01_AE/B recombinant forms. (2011) (13)
- Complex patterns of Hepatitis-C virus longitudinal clustering in a high-risk population. (2018) (13)
- HIV-1 evolution following transmission to an HLA-B*5801-positive patient. (2009) (10)
- Evolution of human immunodeficiency virus type 1 in relation to disease progression in children. (1998) (10)
- Autologous strain-specific cytolytic T lymphocyte responses directed against human immunodeficiency virus type 1 Env. (1998) (10)
- Rapid and sensitive detection of viral nucleic acids using silicon microchips. (2018) (10)
- An Update on Severe Acute Respiratory Syndrome Coronavirus 2 Diversity in the US National Capital Region: Evolution of Novel and Variants of Concern (2021) (10)
- Recrudescence of treated neurosyphilis in a patient with human immunodeficiency virus. (1999) (9)
- Ecchymoses and eschars at sites of injection (1997) (7)
- Correlates of hepatitis C viral clustering among people who inject drugs in Baltimore. (2020) (7)
- Intracellular HIV-1 RNA and CD4+ T-cell activation in patients starting antiretrovirals (2017) (7)
- Factors associated with phylogenetic clustering of hepatitis C among people who inject drugs in Baltimore (2020) (7)
- Plasma virome and the risk of blood-borne infection in persons with substance use disorder (2021) (6)
- IgM anti-ACE2 autoantibodies in severe COVID-19 activate complement and perturb vascular endothelial function (2022) (6)
- Generative optical modeling of whole blood for detecting platelets in lens-free images. (2020) (5)
- 156 – Hepatitis C (2015) (4)
- Interleukin‐18 and tumor necrosis factor‐α are elevated in solid organ transplant recipients with possible cytomegalovirus end‐organ disease (2021) (4)
- An Optical Model of Whole Blood for Detecting Platelets in Lens-Free Images (2019) (4)
- Hepatitis C virus NS3 serine protease variability and evolution are strongly constrained by the need for structural and functional conservation (2002) (4)
- Spatiotemporal Phylodynamics of Hepatitis C Among People Who Inject Drugs in India (2021) (4)
- Severe pruritus after completing pegylated interferon for hepatitis C. (2008) (3)
- Diversity of hepatitis C virus infection among HIV-infected people who inject drugs in India (2019) (3)
- B cell overexpression of FCRL5 and PD-1 is associated with low antibody titers in HCV infection (2022) (3)
- Repeated exposure to heterologous hepatitis C viruses associates with enhanced neutralizing antibody breadth and potency (2022) (3)
- New Therapies for Treating Hepatitis C Virus: Impact on Laboratory Testing Recommendations and Clinical Management. (2017) (2)
- Inconsistent temporal patterns of genetic variation of HCV among high-risk subjects may impact inference of transmission networks. (2019) (2)
- Severe acute respiratory coronavirus virus 2 (SARS-CoV-2) exposure investigations using genomic sequencing among healthcare workers and patients in a large academic center (2022) (2)
- Molecular epidemiology of GB type C virus among individuals exposed to hepatitis C virus in Cameroon (2013) (2)
- Joint Holographic Detection and Reconstruction (2019) (1)
- Decreased Activated CD4+ T Cell Repertoire Diversity After Antiretroviral Therapy in HIV-1/HCV Coinfection Correlates with CD4+ T Cell Recovery. (2021) (1)
- Cognate Antigen during Chronic Infection Persistence and Require Preservation of Acute Infection Are Associated with Viral Hepatitis C Virus-Specific T Cells during High-Programmed Death-1 Levels on Sette (2008) (1)
- Building Leadership Capacity for Mission Execution in a Large Academic Department of Medicine. (2019) (1)
- Impact of Point-of-Care Diagnostics on Clinical Decision-making in Low- and Middle-Income Countries. (2018) (1)
- A22 Phylogenetic clustering of hepatitis C virus infection among people who inject drugs in Baltimore (2019) (1)
- It's 10 pm; Do You Know Where Your Data Are? Data Provenance, Curation, and Storage. (2017) (0)
- The Brief Case: The Fly Who Cried Wohlf (2022) (0)
- Towards real-time urinalysis with holographic lens-free imaging (2022) (0)
- Characterization of hepatitis C virus quasispecies using heteroduplex analysis (1997) (0)
- Porcine Model of Extra-Corporeal Membrane Oxygenation (Ecmo) in the Uncontrolled Non-Heart Beating Donor (Nhbd); the Effect on Liver Viability (2009) (0)
- Closing the Brief Case: The Fly Who Cried Wohlf (2022) (0)
- Studies on gross anatomical organization of different components of female genetalia of Black Bengal goat. (2009) (0)
- of Both Single-and Double-Stranded DNAs Complexity by Electrophoretic Mobilities Assessment of Hepatitis C Virus Sequence (2014) (0)
- Corrigendum: Convergent antibody responses are associated with broad neutralization of hepatitis C virus (2023) (0)
- 952An Outbreak of Hepatitis C Virus Associated with Alleged Narcotic Diversion (2014) (0)
- 686. Elevations in TNFα and IL-18 are Associated with Increased Risk of Probable Cytomegalovirus Tissue Invasive Disease in Solid Organ Transplant Recipients (2020) (0)
- Hepatitis C Virus Infection Representative Ancestral Sequence in Immunogenicity and Cross-Reactivity of a (2012) (0)
- A23 Population level diversification of hepatitis C viral strains over time among people who inject drugs in Baltimore, MD (2019) (0)
- This information is current as Cognate Antigen during Chronic Infection Persistence and Require Preservation of Acute Infection Are Associated with Viral Hepatitis C Virus-Specific T Cells during High-Programmed Death-1 Levels on (2013) (0)
- Lens Free Holographic Imaging for Urinary Tract Infection Screening (2022) (0)
- HCV genotype 1a representative sequence elicits broad CD8+ T cell responses (113.10) (2012) (0)
- Single Cell Laser Capture Microdissection Reveals the Hepatitis C Viral Landscape in the Human Liver (2012) (0)
- Genetic Linkage of Hepatitis B Virus in Peripheral Blood Leukocytes Provides Evidence for Contamination (2010) (0)
- Maternal Neutralizing Antibody and Transmission of HCV to her Infant (2009) (0)
- Convergent antibody responses are associated with broad neutralization of hepatitis C virus (2023) (0)
- Hepatitis C Virus Genetic Diversity and Drug Mutational Analysis in Cameroon: 1992 to 2013 (2016) (0)
- Letter to the Editor: Genetic Linkage of Hepatitis B Virus in Peripheral Blood Leukocytes Provides Evidence for Contamination (2010) (0)
- Convergent antibody responses associated with broad neutralization of hepatitis C virus and clearance of infection (2021) (0)
- Contributors (2015) (0)
- Porcine Model of Extra-Corporeal Membrane Oxygenation (ECMO) in the Uncontrolled Non-Heart Beating Donor; Assessing Tissue Injury (2010) (0)
- Users beware! Biological variation in complete blood counts over short time intervals (2019) (0)
- Assessing Associations Between COVID-19 Symptomology and Adverse Outcomes After Piloting Crowdsourced Data Collection: Cross-sectional Survey Study (2022) (0)
- Factors associated with resistance to SARS-CoV-2 infection discovered using large-scale medical record data and machine learning (2023) (0)
- First report of human infection with Staphylococcus aureus subspecies anaerobius (1997) (0)
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