Susan Celniker | Academic Influence

Susan Celniker's AcademicInfluence.com Rankings

Susan Celniker

Biology

#5341

World Rank

#7798

Historical Rank

#1862

USA Rank

Molecular Biology

#1759

World Rank

#1788

Historical Rank

#221

USA Rank

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Biology

Susan Celniker's Degrees

PhD Molecular Biology University of California, Berkeley
Bachelors Biology University of California, Santa Cruz

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Why Is Susan Celniker Influential?

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According to Wikipedia, Susan E. Celniker is an American biologist, a staff scientist at Lawrence Berkeley National Laboratory and an adjunct professor Comparative Biochemistry department at UC Berkeley. She is the co-director of the Berkeley Drosophila Genome Project.

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Susan Celniker's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

The genome sequence of Drosophila melanogaster. (2000) (6125)
Evolution of genes and genomes on the Drosophila phylogeny (2007) (1992)
Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE (2010) (1211)
Comparative genomics of the eukaryotes. (2000) (1031)
Tools for neuroanatomy and neurogenetics in Drosophila (2008) (874)
Unlocking the secrets of the genome (2009) (832)
The Developmental Transcriptome of Drosophila melanogaster (2010) (766)
Genome-wide analysis of drosophila circular RNAs reveals their structural and sequence properties and age-dependent neural accumulation. (2014) (760)
Systematic determination of patterns of gene expression during Drosophila embryogenesis (2002) (727)
Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome (2002) (664)
Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures (2007) (639)
A Protein Complex Network of Drosophila melanogaster (2011) (605)
The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective (2002) (558)
Diversity and dynamics of the Drosophila transcriptome (2014) (558)
Transcription Factors Bind Thousands of Active and Inactive Regions in the Drosophila Blastoderm (2008) (500)
Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes (2008) (489)
Global analysis of patterns of gene expression during Drosophila embryogenesis (2007) (439)
Finishing a whole-genome shotgun: Release 3 of the Drosophila melanogaster euchromatic genome sequence (2002) (426)
Annotation of the Drosophila melanogaster euchromatic genome: a systematic review (2002) (376)
Amplification of PVT1 Contributes to the Pathophysiology of Ovarian and Breast Cancer (2007) (350)
The Release 6 reference sequence of the Drosophila melanogaster genome (2015) (310)
The abdominal region of the bithorax complex (1985) (302)
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin (2007) (279)
Comparative Analysis of the Transcriptome across Distant Species (2014) (268)
A Quantitative Spatiotemporal Atlas of Gene Expression in the Drosophila Blastoderm (2008) (262)
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly (2002) (260)
Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura (2004) (249)
An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. (1999) (246)
The transcriptional diversity of 25 Drosophila cell lines. (2011) (241)
Genome-wide analysis of promoter architecture in Drosophila melanogaster. (2011) (228)
Global patterns of tissue-specific alternative polyadenylation in Drosophila. (2012) (224)
The Drosophila gene collection: identification of putative full-length cDNAs for 70% of D. melanogaster genes. (2002) (211)
The molecular genetics of the bithorax complex of Drosophila: characterization of the products of the Abdominal-B domain. (1989) (204)
A Drosophila full-length cDNA resource (2002) (200)
Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster (2005) (197)
The molecular genetics of the bithorax complex of Drosophila: cis‐regulation in the Abdominal‐B domain. (1990) (197)
Deletion mutations affecting autonomously replicating sequence ARS1 of Saccharomyces cerevisiae. (1984) (192)
De novo Identification of DNA Modifications Enabled by Genome-Guided Nanopore Signal Processing (2017) (187)
An Extracellular Interactome of Immunoglobulin and LRR Proteins Reveals Receptor-Ligand Networks (2013) (180)
Dynamic reprogramming of chromatin accessibility during Drosophila embryo development (2011) (177)
Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes. (2007) (158)
Complete sequence of the bithorax complex of Drosophila. (1995) (155)
Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome (2002) (154)
A BAC-based physical map of the major autosomes of Drosophila melanogaster. (2000) (153)
Genome-wide Identification of Zero Nucleotide Recursive Splicing in Drosophila (2014) (148)
Benchmarking tools for the alignment of functional noncoding DNA (2004) (145)
DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila (2012) (144)
Spatial expression of transcription factors in Drosophila embryonic organ development (2013) (135)
Comparative validation of the D. melanogaster modENCODE transcriptome annotation (2014) (134)
Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster. (2005) (133)
Long-read, whole-genome shotgun sequence data for five model organisms (2014) (132)
The ModERN Resource: Genome-Wide Binding Profiles for Hundreds of Drosophila and Caenorhabditis elegans Transcription Factors (2017) (121)
Stability-driven nonnegative matrix factorization to interpret spatial gene expression and build local gene networks (2016) (103)
Regulation of early endosomal entry by the Drosophila tumor suppressors Rabenosyn and Vps45. (2008) (98)
Systematic image-driven analysis of the spatial Drosophila embryonic expression landscape (2010) (93)
Drosophila Histone Demethylase KDM5 Regulates Social Behavior through Immune Control and Gut Microbiota Maintenance. (2019) (92)
Determination of gene expression patterns using high-throughput RNA in situ hybridization to whole-mount Drosophila embryos (2009) (90)
Improved repeat identification and masking in Dipterans. (2007) (88)
DNA copy number evolution in Drosophila cell lines (2014) (85)
The Drosophila melanogaster genome. (2003) (84)
Influence of early life exposure, host genetics and diet on the mouse gut microbiome and metabolome (2016) (84)
Automated protein-DNA interaction screening of Drosophila regulatory elements (2011) (82)
Genomic organization of the Drosophila telomere retrotransposable elements. (2006) (81)
Transcription factor networks in Drosophila melanogaster. (2014) (80)
Development of the indirect flight muscle attachment sites in Drosophila: role of the PS integrins and the stripe gene. (1996) (79)
Yeast DNA replication in vitro: Initiation and elongation events mimic in vivo processes (1982) (78)
Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants (2013) (77)
Regulation of alternative splicing in Drosophila by 56 RNA binding proteins (2015) (76)
Drosophila telomeric retrotransposons derived from an ancestral element that was recruited to replace telomerase. (2007) (73)
Quantitative Analysis of the Drosophila Segmentation Regulatory Network Using Pattern Generating Potentials (2010) (69)
A Whole-Genome Assembly of Drosophila (2000) (63)
Posterior patterning genes and the identification of a unique body region in the brine shrimp Artemia franciscana (2003) (63)
RNA editing in Drosophila melanogaster: New targets and functional consequences. (2006) (62)
Identification of a Drosophila muscle development gene with structural homology to mammalian early growth response transcription factors. (1995) (61)
Competitive Repair by Naturally Dispersed Repetitive DNA during Non-Allelic Homologous Recombination (2010) (59)
Genome-guided transcript assembly from integrative analysis of RNA sequence data (2014) (54)
Computational Identification of Diverse Mechanisms Underlying Transcription Factor-DNA Occupancy (2013) (52)
Y Chromosome and Other Heterochromatic Sequences of the Drosophila Melanogaster Genome: How Far can we go? (2003) (51)
The Drosophila genome. (2000) (49)
Lessons from modENCODE. (2015) (45)
Functional Evolution of cis-Regulatory Modules at a Homeotic Gene in Drosophila (2009) (44)
Genetic and metabolic links between the murine microbiome and memory (2020) (44)
A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. (2005) (41)
Diversity and dynamics of the Drosophila (2014) (41)
Identification of genetic factors that modify motor performance and body weight using Collaborative Cross mice (2015) (40)
Characterization of MtnE, the fifth metallothionein member in Drosophila (2011) (39)
Evolution of the homeobox complex in the Diptera (2003) (35)
Diverse Hormone Response Networks in 41 Independent Drosophila Cell Lines (2016) (33)
Transabdominal, a dominant mutant of the Bithorax Complex, produces a sexually dimorphic segmental transformation in Drosophila. (1987) (33)
Development of expression-ready constructs for generation of proteomic libraries. (2011) (30)
Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila (2015) (28)
Muscle development in the four-winged Drosophila and the role of the Ultrabithorax gene (1994) (28)
Identification and analysis of U5 snRNA variants in Drosophila. (2005) (28)
An important class of intron retention events in human erythroblasts is regulated by cryptic exons proposed to function as splicing decoys (2018) (25)
Selective time-dependent changes in activity and cell-specific gene expression in human postmortem brain (2021) (23)
THE BIOLOGY OF GENOMES (2010) (23)
Chromatin looping mediates boundary element promoter interactions. (2007) (20)
Refining interaction search through signed iterative Random Forests (2018) (20)
Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP) (2005) (19)
High-throughput plasmid cDNA library screening (2006) (19)
Sequence analysis of the cis-regulatory regions of the bithorax complex of Drosophila (1995) (18)
Molecular basis of transabdominal--a sexually dimorphic mutant of the bithorax complex of Drosophila. (1993) (18)
Automating fruit fly Drosophila embryo injection for high throughput transgenic studies. (2008) (18)
Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy (2018) (18)
Diverse tumour susceptibility in Collaborative Cross mice: identification of a new mouse model for human gastric tumourigenesis (2019) (17)
Navigating and mining modENCODE data. (2014) (16)
Sequence analysis of the cis-regulatory regions of the bithorax complex of Drosophila. (1995) (16)
Comparative Analysis of Spatial Patterns of Gene Expression in Drosophila melanogaster Imaginal Discs (2007) (15)
Gut microbiome partially mediates and coordinates the effects of genetics on anxiety-like behavior in Collaborative Cross mice (2021) (12)
A new platform for ultra-high dose rate radiobiological research using the BELLA PW laser proton beamline (2022) (12)
Constructing a Quantitative Spatio-temporal Atlas of Gene Expression in the Drosophila Blastoderm (2007) (11)
The transposable elements of the Drosophila melanogaster (2002) (10)
Correction: Benchmarking tools for the alignment of functional noncoding DNA (2004) (10)
Phylogenetic and Genomewide Analyses Suggest a Functional Relationship Between kayak, the Drosophila Fos Homolog, and fig, a Predicted Protein Phosphatase 2C Nested Within a kayak Intron (2007) (8)
The modENCODE Consortium modENCODE Drosophila Identification of Functional Elements and Regulatory Circuits (2011) (7)
OpenHiCAMM: High-Content Screening Software for Complex Microscope Imaging Workflows (2018) (5)
Reveal Motives for Charitable Donations Neural Responses to Taxation and Voluntary Giving (2007) (5)
Deletion mutations affecting autonomously replicating sequence ARS1 of Saccharomyces cerevisiae (1984) (5)
Complete Genome Sequence of Lactobacillus plantarum Oregon-R-modENCODE Strain BDGP2 Isolated from Drosophila melanogaster Gut (2017) (4)
Correction: Transcription Factors Bind Thousands of Active and Inactive Regions in the Drosophila Blastoderm (2008) (4)
Two neuronal peptides encoded from a single transcript regulate mitochondrial complex III in Drosophila (2020) (4)
Initial de novo Assemblies of the D. melanogaster genome using long-read PacBio sequencing (2014) (4)
An integrated host-microbiome response to atrazine exposure mediates toxicity in Drosophila (2021) (4)
Creation of a minimal tiling path of genomic clones for Drosophila: provision of a common resource. (2004) (3)
Role and impact of the gut microbiota in a Drosophila model for parkinsonism (2019) (3)
Complete Genome Sequence of Bacillus kochii Oregon-R-modENCODE Strain BDGP4, Isolated from Drosophila melanogaster Gut (2017) (2)
Improved mosquito genome points to population-control strategies (2018) (2)
Complete Genome Sequence of Enterococcus durans Oregon-R-modENCODE Strain BDGP3, a Lactic Acid Bacterium Found in the Drosophila melanogaster Gut (2017) (2)
Complete Genome Sequence of the Citrobacter freundii Type Strain (2020) (2)
Next-generation large-scale binary protein interaction network for Drosophila (2022) (2)
Thirdhand cigarette smoke leads to age‐dependent and persistent alterations in the cecal microbiome of mice (2021) (2)
THE ABDOMINAL REGION O FT HE BITHORAX COMPLEX (1985) (2)
Complete Genome Sequence of Acetobacter pomorum Oregon-R-modENCODE Strain BDGP5, an Acetic Acid Bacterium Found in the Drosophila melanogaster Gut (2017) (1)
Deletion Mutations Affecting Autonomously Replicating Sequence (1)
Virtual embryos as tools for 3d gene expression analyses (2007) (1)
Complete Genome Sequence of Agrobacterium sp. Strain 33MFTa1.1, Isolated from Thlaspi arvense Roots (2019) (1)
In memoriam: Edward B. Lewis (1918-2004). (2004) (1)
Complete Genome Sequence of Acetobacter tropicalis Oregon-R-modENCODE Strain BDGP1, an Acetic Acid Bacterium Found in the Drosophila melanogaster Gut (2017) (1)
Chromosomal Sequence of Lactobacillus brevis Oregon-R-modENCODE Strain BDGP6, a Lactic Acid Bacterium Isolated from the Gut of Drosophila melanogaster (2020) (1)
No difference in 4‐nitroquinoline induced tumorigenesis between germ‐free and colonized mice (2019) (1)
Spatial expression of transcription factors in Drosophilaembryonic organ development (2013) (1)
Correction to: DNA copy number evolution in Drosophila cell lines (2019) (1)
ENCSR959DQE (2019) (0)
ENCSR423HDZ (2019) (0)
ENCSR724PYN (2019) (0)
ENCSR548UHS (2019) (0)
ENCSR301XPT (2019) (0)
ENCSR680MSH (2019) (0)
determinants reveals a multitude of novel recognition motifs and binding zinc finger proteins 2-His 2 Cys Drosophila Global analysis of Material Supplemental (2014) (0)
ENCSR877VRF (2019) (0)
SF3B1 Gene Expression in Erythroid Cells Is Regulated By Intron Retention Via a Posttranscriptional Mechanism Involving Cryptic Exons Proposed to Function As Splicing Decoys (2017) (0)
Frontiers in RNA biology: Advances from a small fly Drosophila melanogaster (2016) (0)
ENCSR474HMU (2019) (0)
ENCSR719OKP (2019) (0)
ENCSR458SVD (2019) (0)
ENCSR762GGY (2019) (0)
ENCSR444QYK (2019) (0)
ENCSR944BOU (2019) (0)
ENCSR307BVX (2019) (0)
ENCSR289CYF (2019) (0)
ENCSR895WGR (2019) (0)
ENCSR504SWK (2019) (0)
ENCSR093MEH (2019) (0)
ENCSR394ZMQ (2019) (0)
ENCSR326QRM (2019) (0)
Correction: Quantitative Analysis of the Drosophila Segmentation Regulatory Network Using Pattern Generating Potentials (2013) (0)
ENCSR907YCU (2019) (0)
ENCSR755YRY (2019) (0)
ENCSR931EER (2019) (0)
ENCSR573JSS (2019) (0)
ENCSR519XWV (2019) (0)
Examples of interesting observations from this project (2011) (0)
ENCSR364XCF (2019) (0)
ENCSR560GZO (2019) (0)
ENCSR202ZVO (2019) (0)
ENCSR439FGE (2019) (0)
Title Regulation of alternative splicing in Drosophila by 56 RNA binding proteins (2015) (0)
ENCSR066FUL (2019) (0)
5917 Characterisation of a unique body region to cooperate with Hox genes to define the identity of the posterior genital (0)
ENCSR244XGY (2019) (0)
ENCSR554IWH (2019) (0)
ENCSR047LTG (2019) (0)
Molecular and functional characterization of the Drosophila melanogaster conserved smORFome (2022) (0)
ENCSR212SHB (2019) (0)
ENCSR319QUN (2019) (0)
ENCSR770BZR (2019) (0)
ENCSR067WTH (2019) (0)
Linking the microbiome to memory (2020) (0)
ENCSR251SMB (2019) (0)
Labeling proteins within Drosophila embryos by combining FRET reporters, position-specific genomic integration, and GAL4-reponsive expression (2019) (0)
ENCSR754KEV (2019) (0)
ENCSR822QGF (2019) (0)
De novo assembly of the Drosophila Melanogaster fruit fly genome by long-read sequencing (2014) (0)
ENCSR413JFV (2019) (0)
ENCSR412CLT (2019) (0)
ENCSR133CZI (2019) (0)
ENCSR534NDG (2019) (0)
ENCSR470MJJ (2019) (0)
ENCSR051GNG (2019) (0)
ENCSR377PTA (2019) (0)
ENCSR149RUM (2019) (0)
ENCSR355TOK (2019) (0)
ENCSR523IFB (2019) (0)
ENCSR625CVN (2019) (0)
ENCSR595PMA (2019) (0)
ENCSR629FXI (2019) (0)
ENCSR712BIW (2019) (0)
ENCSR317MVV (2019) (0)
ENCSR383RTF (2019) (0)
ENCSR495ZCJ (2019) (0)
ENCSR163IYI (2019) (0)
ENCSR479MNS (2019) (0)
ENCSR561NVP (2019) (0)
ENCSR963KDE (2019) (0)
ENCSR098GAO (2019) (0)
ENCSR457KBG (2019) (0)
ENCSR755ASK (2019) (0)
ENCSR180YUC (2019) (0)
ENCSR316ITY (2019) (0)
ENCSR629RYK (2019) (0)
ENCSR535NRZ (2019) (0)
ENCSR090TYL (2019) (0)
ENCSR237ZFL (2019) (0)
ENCSR315VLR (2019) (0)
ENCSR859TDD (2019) (0)
ENCSR822QNW (2019) (0)
Decoding embryonic cis-regulatory modules at Drosophila Hox genes (2009) (0)
A better Drosophila Melanogaster genome by long-read sequencing (2014) (0)
ENCSR891PPB (2019) (0)
ENCSR243BLT (2019) (0)
ENCSR911OFF (2019) (0)
DNA copy number evolution in Drosophila cell lines (2014) (0)
Gut microbiome partially mediates and coordinates the effects of genetics on anxiety-like behavior in Collaborative Cross mice (2021) (0)
Inactivation of multiple human pathogens by Fathhome's dry sanitizer device: Rapid and eco-friendly ozone-based disinfection (2022) (0)
Genetic and metabolic links between the murine microbiome and memory (2020) (0)
ENCSR035SVG (2019) (0)
A modERN resource: identification of Drosophila transcription factor candidate target genes using RNAi (2023) (0)
Improved mosquito genome points to population-control strategies (2018) (0)
Correction to: Genetic and metabolic links between the murine microbiome and memory (2020) (0)
Diversity and dynamics of the Drosophila transcriptome Please share how this access benefits you. Your story matters (2014) (0)
ENCSR621TQN (2019) (0)
ENCSR491CMU (2019) (0)
ENCSR353ROS (2019) (0)
ENCSR439IYF (2019) (0)
ENCSR843VZK (2019) (0)
Correction to: DNA copy number evolution in Drosophila cell lines (2019) (0)
ENCSR172RNV (2019) (0)
ENCSR971HUE (2019) (0)
ENCSR348YVC (2019) (0)
ENCSR305BSX (2019) (0)
ENCSR960HOL (2019) (0)
ENCSR308HUY (2019) (0)
ENCSR732YIY (2019) (0)
ENCSR321KYP (2019) (0)
ENCSR693ONK (2019) (0)
ENCSR540XNF (2019) (0)
ENCSR872UEL (2019) (0)
Erratum: An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster. The Adh region (Genetics 153 (179-219)) (1999) (0)
ENCSR671UJC (2019) (0)
Host genetics and gut microbiota cooperatively contribute to azoxymethane-induced acute toxicity in Collaborative Cross mice (2021) (0)
Su2040 – Diverse Tumor Susceptibility in Collaborative Cross Mice: Identification of a New Model for Human Gastric Tumorigenesis (2019) (0)
Correction to: Genetic and metabolic links between the murine microbiome and memory (2020) (0)
Lawrence Berkeley National Laboratory Recent Work Title Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila Permalink (2015) (0)
ENCSR520WRX (2019) (0)
cell lines Drosophila The transcriptional diversity of 25 Material Supplemental (2010) (0)
ENCSR848RQY (2019) (0)
ENCSR193PSI (2019) (0)
ENCSR215VHC (2019) (0)
Susan Celniker: Foundational Resources To Study a Dynamic Genome (2016) (0)
ENCSR815BUC (2019) (0)
ENCSR495ORA (2019) (0)
ENCSR725USC (2019) (0)
ENCSR875SQZ (2019) (0)
ENCSR543DTG (2019) (0)
ENCSR322GTE (2019) (0)
ENCSR370ETJ (2019) (0)
ENCSR086ONA (2019) (0)
Drosophila by the dozen (2007) (0)
ENCSR945KDK (2019) (0)
ENCSR122DKJ (2019) (0)
ENCSR725NVH (2019) (0)
ENCSR323XVD (2019) (0)
ENCSR068JQB (2019) (0)
ENCSR382NOE (2019) (0)
ENCSR805BLA (2019) (0)
ENCSR733GMN (2019) (0)
ENCSR994LDP (2019) (0)
ENCSR793UCQ (2019) (0)
ENCSR822ASI (2019) (0)

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What Schools Are Affiliated With Susan Celniker?

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