Takashi Gojobori | Academic Influence

Takashi Gojobori's AcademicInfluence.com Rankings

Takashi Gojobori

Biology

#548

World Rank

#965

Historical Rank

Molecular Biology

#97

World Rank

#100

Historical Rank

Genetics

#126

World Rank

#163

Historical Rank

biology Degrees

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Biology

Takashi Gojobori's Degrees

PhD Biological Sciences University of Tokyo

Why Is Takashi Gojobori Influential?

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According to Wikipedia, is a Japanese molecular biologist, Vice-Director of the National Institute of Genetics and the DNA Data Bank of Japan at NIG, in Mishima, Japan. Gojobori is a Distinguished Professor at King Abdullah University of Science and Technology in Thuwal, Saudi Arabia. He is a Professor of Bioscience and Acting Director at the Computational Bioscience Research Center at KAUST.

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Takashi Gojobori's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. (1986) (4854)
The Transcriptional Landscape of the Mammalian Genome (2005) (3394)
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs (2002) (1543)
Codon usage tabulated from international DNA sequence databases: status for the year 2000 (2000) (1227)
Big data: The future of biocuration (2008) (749)
The dynamic genome of Hydra (2010) (744)
Functional annotation of a full-length mouse cDNA collection (2001) (682)
Molecular cloning and expression of a member of the aquaporin family with permeability to glycerol and urea in addition to water expressed at the basolateral membrane of kidney collecting duct cells. (1994) (572)
Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis (2002) (569)
The genome sequence and structure of rice chromosome 1 (2002) (561)
Mapping Human Genetic Diversity in Asia (2009) (559)
Classification, nomenclature, and database development for hepatitis C virus (HCV) and related viruses: proposals for standardization (1998) (538)
Pseudogenes as a paradigm of neutral evolution (1981) (499)
Biased biological functions of horizontally transferred genes in prokaryotic genomes (2004) (481)
A method for detecting positive selection at single amino acid sites. (1999) (470)
Codon usage tabulated from the GenBank Genetic Sequence Data. (1988) (459)
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line (2009) (441)
The genome of Chenopodium quinoa (2016) (440)
Endogenous non-retroviral RNA virus elements in mammalian genomes (2010) (401)
Large-scale search for genes on which positive selection may operate. (1996) (386)
Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones (2004) (346)
Complete nucleotide sequence of an infectious clone of human T-cell leukemia virus type II: an open reading frame for the protease gene. (1985) (338)
The Rice Annotation Project Database (RAP-DB): 2008 update* (2007) (337)
A comparison of the molecular clock of hepatitis C virus in the United States and Japan predicts that hepatocellular carcinoma incidence in the United States will increase over the next two decades (2002) (336)
Phylogenetic analysis of the complete genome of 18 Norwalk-like viruses. (2002) (327)
Codon usage tabulated from the GenBank genetic sequence data. (1991) (309)
Monophyletic origin and unique dispersal patterns of domestic fowls. (1996) (307)
FGFR-related gene nou-darake restricts brain tissues to the head region of planarians (2002) (257)
Patterns of nucleotide substitution in pseudogenes and functional genes (2005) (253)
The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information (2005) (247)
Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. (2007) (246)
Systems medicine and integrated care to combat chronic noncommunicable diseases (2011) (230)
Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens. (2003) (222)
Host-independent evolution and a genetic classification of the hepadnavirus family based on nucleotide sequences. (1989) (221)
A web‐based interactive developmental table for the ascidian Ciona intestinalis, including 3D real‐image embryo reconstructions: I. From fertilized egg to hatching larva (2007) (219)
Molecular clock of viral evolution, and the neutral theory. (1990) (218)
Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes. (1999) (217)
A Large Variation in the Rates of Synonymous Substitution for RNA Viruses and Its Relationship to a Diversity of Viral Infection and Transmission Modes (2004) (199)
Molecular phylogeny and evolution of primate mitochondrial DNA. (1988) (191)
Long-range neural and gap junction protein-mediated cues control polarity during planarian regeneration. (2010) (191)
Codon usage tabulated from the international DNA sequence databases (1997) (188)
The evolutionary position of nematodes (2002) (186)
Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular L1 subfamilies in ancestral primates (2003) (185)
Diversity of preferred nucleotide sequences around the translation initiation codon in eukaryote genomes (2007) (183)
CIBEX: center for information biology gene expression database. (2003) (173)
The Origin and Evolution of Porcine Reproductive and Respiratory Syndrome Viruses (2005) (172)
Leptin and Obesity: Role and Clinical Implication (2021) (169)
Origin and evolutionary process of the CNS elucidated by comparative genomics analysis of planarian ESTs (2003) (166)
Sequence of a novel simian immunodeficiency virus from a wild-caught African mandrill (1989) (165)
The First Symbiont-Free Genome Sequence of Marine Red Alga, Susabi-nori (Pyropia yezoensis) (2013) (164)
CORRIGENDUM: Innexin gap junctions in nerve cells coordinate spontaneous contractile behavior in Hydra polyps (2014) (159)
Molecular cloning and characterization of a novel glycoprotein, gp34, that is specifically induced by the human T-cell leukemia virus type I transactivator p40tax (1991) (154)
DNA Data Bank of Japan (DDBJ) for genome scale research in life science (2002) (152)
Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA (2001) (149)
Dissecting planarian central nervous system regeneration by the expression of neural‐specific genes (2002) (144)
Transcriptional Interferences in cis Natural Antisense Transcripts of Humans and Mice (2007) (132)
Whole genome association study of rheumatoid arthritis using 27 039 microsatellites. (2005) (131)
Evolutionary aspects of gobioid fishes based upon a phylogenetic analysis of mitochondrial cytochrome B genes. (2000) (127)
Condon usage tabulated from the international DNA sequence databases (1996) (125)
Dynamic evolution of translation initiation mechanisms in prokaryotes (2010) (121)
Evolution of complex structures: minicollagens shape the cnidarian nematocyst. (2008) (121)
Constrained evolution with respect to gene overlap of hepatitis B virus (2009) (121)
The expression of neural-specific genes reveals the structural and molecular complexity of the planarian central nervous system (2002) (120)
Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna (2013) (117)
Rates of synonymous substitution and base composition of nuclear genes in Drosophila. (1992) (116)
SNP profile within the human major histocompatibility complex reveals an extreme and interrupted level of nucleotide diversity. (2000) (116)
Rapid evolution of goat and sheep globin genes following gene duplication. (1983) (115)
Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence (2003) (114)
Estimation of average number of nucleotide substitutions when the rate of substitution varies with nucleotide (2005) (113)
The apocarotenoid metabolite zaxinone regulates growth and strigolactone biosynthesis in rice (2019) (113)
Theoretical Bases for Karyotype Evolution. 1. The Minimum-Interaction Hypothesis (1986) (110)
Rapid Evolution of Major Histocompatibility Complex Class I Genes in Primates Generates New Disease Alleles in Humans via Hitchhiking Diversity (2006) (109)
Rate of Evolution in Brain-Expressed Genes in Humans and Other Primates (2006) (108)
Human cytomegalovirus glycoprotein N (gpUL73-gN) genomic variants: identification of a novel subgroup, geographical distribution and evidence of positive selective pressure. (2003) (106)
The origin and evolution of Ebola and Marburg viruses. (1997) (106)
SARS-CoV-2 infections and COVID-19 mortalities strongly correlate with ACE1 I/D genotype (2020) (105)
Rates of evolution of the retroviral oncogene of Moloney murine sarcoma virus and of its cellular homologues. (1985) (104)
Evolutionary mechanisms and population dynamics of the third variable envelope region of HIV within single hosts. (1997) (103)
Statistical analysis of nucleotide sequences of the hemagglutinin gene of human influenza A viruses. (1994) (102)
DNA Data Bank of Japan (DDBJ) in XML (2003) (101)
Evolutionary origin of pathogenic determinants in enterotoxigenic Escherichia coli and Vibrio cholerae O1 (1987) (99)
Codon usage tabulated from the international DNA sequence databases; its status 1999 (1999) (98)
DDBJ launches a new archive database with analytical tools for next-generation sequence data (2009) (97)
DBJ in the stream of various biological data (2004) (96)
Detection of apoptosis during planarian regeneration by the expression of apoptosis-related genes and TUNEL assay. (2004) (96)
Reevaluation of Amino Acid Variability of the Human Immunodeficiency Virus Type 1 gp120 Envelope Glycoprotein and Prediction of New Discontinuous Epitopes (2000) (96)
Comparative analysis of gene expression for convergent evolution of camera eye between octopus and human. (2004) (93)
Evolutionary relationship of hepatitis C, pesti‐, flavi‐, plantviruses, and newly discovered GB hepatitis agents (1996) (93)
Precise switching of DNA replication timing in the GC content transition area in the human major histocompatibility complex (1997) (92)
DDBJ with new system and face (2007) (87)
The evolutionary emergence of cell type-specific genes inferred from the gene expression analysis of Hydra (2007) (86)
Intragenic recombinations in rotaviruses (1998) (85)
ADAPTSITE: detecting natural selection at single amino acid sites (2001) (84)
Evolution of vitamin B6 (pyridoxine) metabolism by gain and loss of genes. (2005) (83)
The temporal sequence of the mammalian neocortical neurogenetic program drives mediolateral pattern in the chick pallium. (2012) (81)
Binary classification of protein molecules into intrinsically disordered and ordered segments (2011) (80)
Search for the evolutionary origin of a brain: planarian brain characterized by microarray. (2003) (79)
Challenges and Opportunities of Airborne Metagenomics (2015) (78)
No Evidence for Temperature-Dependence of the COVID-19 Epidemic (2020) (78)
Evolution of gap junctions: the missing link? (2004) (78)
An evolutionary origin and selection process of goldfish. (2009) (78)
Mitochondrial DNA polymorphism among five Asian populations. (1988) (77)
Degeneration after sexual differentiation in hydra and its relevance to the evolution of aging. (2006) (77)
The genome stability in Corynebacterium species due to lack of the recombinational repair system. (2003) (76)
Evolution of nicotinic acetylcholine receptor subunits. (1998) (76)
Neural network in planarian revealed by an antibody against planarian synaptotagmin homologue. (1999) (75)
Correct and incorrect vertebrate phylogenies obtained by the entire mitochondrial DNA sequences. (1999) (75)
Towards BioDBcore: a community-defined information specification for biological databases (2011) (71)
DNA Data Bank of Japan (DDBJ) in collaboration with mass sequencing teams (2000) (70)
Induction of a noggin-like gene by ectopic DV interaction during planarian regeneration. (2002) (69)
Eye-like ocelloids are built from different endosymbiotically acquired components (2015) (69)
Nematogalectin, a nematocyst protein with GlyXY and galectin domains, demonstrates nematocyte-specific alternative splicing in Hydra (2010) (69)
Comparative genomics of bidirectional gene pairs and its implications for the evolution of a transcriptional regulation system. (2005) (69)
Phylogenetic and virulence analysis of tick-borne encephalitis viruses from Japan and far-Eastern Russia. (1999) (68)
Strong Positive Selection and Recombination Drive the Antigenic Variation of the PilE Protein of the Human Pathogen Neisseria meningitidis (2004) (68)
Codon and base biases after the initiation codon of the open reading frames in the Escherichia coli genome and their influence on the translation efficiency. (2001) (67)
Where is the origin of the Japanese gamecocks? (2003) (66)
The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts* (2007) (66)
Alternative splicing in human transcriptome: functional and structural influence on proteins. (2006) (65)
Low Concentrations of Vitamin C Reduce the Synthesis of Extracellular Polymers and Destabilize Bacterial Biofilms (2017) (63)
Confirmation of hepatitis C virus transmission through needlestick accidents by molecular evolutionary analysis. (1994) (63)
Comparative Genome Analysis of Three Eukaryotic Parasites with Differing Abilities To Transform Leukocytes Reveals Key Mediators of Theileria-Induced Leukocyte Transformation (2012) (62)
Evolutionary significance of intra-genome duplications on human chromosomes. (1997) (62)
Comparative study of flux redistribution of metabolic pathway in glutamate production by two coryneform bacteria. (2005) (62)
Codon substitution in evolution and the "saturation" of synonymous changes. (1983) (61)
Evolutionary origin of human and simian immunodeficiency viruses. (1990) (60)
Infectious Endogenous Retroviruses in Cats and Emergence of Recombinant Viruses (2012) (60)
DDBJ progress report (2010) (59)
Genome Biology and Evolution (2010) (59)
The mitochondrial genome of the pufferfish, Fugu rubripes, and ordinal teleostean relationships. (2002) (58)
Establishment of a phylogenetic survey system for AIDS-related lentiviruses and demonstration of a new HIV-2 subgroup. (1990) (58)
Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes. (2007) (58)
Towards BioDBcore: a community-defined information specification for biological databases (2010) (57)
Marine metagenomics as a source for bioprospecting. (2015) (57)
Concerted evolution of the immunoglobulin VH gene family. (1984) (55)
Brachyury‐downstream gene sets in a chordate, Ciona intestinalis: integrating notochord specification, morphogenesis and chordate evolution (2008) (55)
Genetic polymorphism of the swine major histocompatibility complex (SLA) class I genes, SLA-1, -2 and -3 (2003) (55)
Codon usage tabulated from the international DNA sequence databases (1998) (55)
Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities (2021) (55)
Reduction of synonymous substitutions in the core protein gene of hepatitis C virus (2004) (52)
Genome plasticity as a paradigm of eubacteria evolution (2009) (52)
Chinese spring wheat (Triticum aestivum L.) chloroplast genome: Complete sequence and contig clones (2000) (51)
Molecular evolutionary analyses implicate injection treatment for schistosomiasis in the initial hepatitis C epidemics in Japan. (2005) (51)
DDBJ in preparation for overview of research activities behind data submissions (2005) (51)
The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments (2011) (51)
DTiGEMS+: drug–target interaction prediction using graph embedding, graph mining, and similarity-based techniques (2020) (51)
Gene organization of the quail major histocompatibility complex (MhcCoja) class I gene region (1999) (50)
Organization and nucleotide sequence of a densovirus genome imply a host-dependent evolution of the parvoviruses (1987) (50)
Hepatitis C virus types 7, 8 and 9 should be classified as type 6 subtypes. (1996) (50)
H-DBAS: Alternative splicing database of completely sequenced and manually annotated full-length cDNAs based on H-Invitational (2006) (49)
Multiple Plastids Collected by the Dinoflagellate Dinophysis mitra through Kleptoplastidy (2011) (49)
Determination of HLA class II alleles by genotyping in a Manchu population in the northern part of China and its relationship with Han and Japanese populations. (1995) (49)
Highly conserved upstream sequences for transcription factor genes and implications for the regulatory network. (2004) (47)
The Emerging Facets of Non-Cancerous Warburg Effect (2017) (47)
Ascidian tyrosinase gene: Its unique structure and expression in the developing brain (1997) (46)
Molecular evolutionary virology: its application to hepatitis C virus. (1994) (46)
CovMT: an interactive SARS-CoV-2 mutation tracker, with a focus on critical variants (2021) (45)
Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56 419 completely sequenced and manually annotated full-length cDNAs (2006) (45)
H-DBAS: human-transcriptome database for alternative splicing: update 2010 (2009) (44)
Finding Nemo’s Genes: A chromosome‐scale reference assembly of the genome of the orange clownfish Amphiprion percula (2018) (43)
Marine Metagenome as A Resource for Novel Enzymes (2015) (43)
Evolution of Pacific Ocean and the Sea of Japan populations of the gobiid species, Pterogobius elapoides and Pterogobius zonoleucus, based on molecular and morphological analyses. (2008) (43)
Major histocompatibility complex class II alleles in Kazak and Han populations in the Silk Route of northwestern China. (1997) (43)
Distribution and Effects of Nonsense Polymorphisms in Human Genes (2008) (42)
Differences in the evolutionary pattern of feline panleukopenia virus and canine parvovirus. (1998) (42)
Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees (2007) (41)
H-InvDB in 2009: extended database and data mining resources for human genes and transcripts (2009) (41)
Cloning and functional analysis of ascidian Mitf in vivo: insights into the origin of vertebrate pigment cells (2003) (41)
DDBJ in collaboration with mass-sequencing teams on annotation (2004) (41)
The evolutionary relationship between gene duplication and alternative splicing. (2008) (40)
Phylogenetic relationships among Japanese, rhesus, Formosan, and crab-eating monkeys, inferred from restriction-enzyme analysis of mitochondrial DNAs. (1988) (40)
The evolutionary origin of long-crowing chicken: its evolutionary relationship with fighting cocks disclosed by the mtDNA sequence analysis. (2004) (40)
African origin of GB virus C/hepatitis G virus 1 (1998) (40)
Recombinational hotspot specific to female meiosis in the mouse major histocompatibility complex (2004) (40)
Midline governs axon pathfinding by coordinating expression of two major guidance systems. (2009) (40)
Statistical methods for estimating sequence divergence. (1990) (39)
DNA Data Bank of Japan in the age of information biology (1997) (39)
Molecular evolution of the human immunodeficiency and related viruses. (1988) (39)
Maser: one-stop platform for NGS big data from analysis to visualization (2018) (39)
In silico chromosome staining: Reconstruction of Giemsa bands from the whole human genome sequence (2002) (39)
Innexin gap junctions in nerve cells coordinate spontaneous contractile behavior in Hydra polyps (2014) (39)
DNA Data Bank of Japan at work on genome sequence data (1998) (39)
Comparative analysis of the base biases at the gene terminal portions in seven eukaryote genomes. (2003) (39)
Evolution of bioluminescence in marine planktonic copepods. (2012) (38)
cimp1, a novel astacin family metalloproteinase gene from East African cichlids, is differentially expressed between species during growth. (2005) (38)
Development of an accurate classification system of proteins into structured and unstructured regions that uncovers novel structural domains: its application to human transcription factors (2009) (38)
Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus (2011) (37)
DDBJ dealing with mass data produced by the second generation sequencer (2008) (37)
Comparative genomic analysis of translation initiation mechanisms for genes lacking the Shine–Dalgarno sequence in prokaryotes (2017) (36)
Japanese domesticated chickens have been derived from Shamo traditional fighting cocks. (2004) (36)
I. Analysis with restriction enzymes of six base pair recognition (1984) (36)
Relationships between serotypes and genotypes of hepatitis B virus: genetic classification of HBV by use of surface genes. (1995) (35)
HLA genes and haplotypes in Ryukyuans suggest recent gene flow to the Okinawa Islands. (1999) (35)
Different evolutionary histories in two subgenomic regions of the major histocompatibility complex. (1999) (35)
Classification of hepatitis C virus into major types and subtypes based on molecular evolutionary analysis. (1995) (35)
Metagenomic studies of the Red Sea. (2016) (35)
Function and Evolutionary Origin of Unicellular Camera-Type Eye Structure (2015) (33)
Slow Evolutionary Rate of GB Virus C/Hepatitis G Virus (1999) (33)
A Non-sulfated Chondroitin Stabilizes Membrane Tubulation in Cnidarian Organelles* (2010) (33)
Global Ramifications of Dust and Sandstorm Microbiota (2018) (32)
The evolutionary rate of a protein is influenced by features of the interacting partners. (2006) (32)
Microarray analysis of embryonic retinoic acid target genes in the ascidian Ciona intestinalis (2003) (32)
Low conservation and species-specific evolution of alternative splicing in humans and mice: comparative genomics analysis using well-annotated full-length cDNAs (2008) (32)
Evolution of pathogenic viruses with special reference to the rates of synonymous and nonsynonymous substitutions. (1994) (31)
Major histocompatibility complex class II alleles in an Uygur population in the Silk Route of Northwest China. (2008) (31)
Machine learning and deep learning methods that use omics data for metastasis prediction (2021) (31)
Extensive nucleotide variability within a 370 kb sequence from the central region of the major histocompatibility complex. (1999) (31)
Early Detection of G + C Differences in Bacterial Species Inferred from the Comparative Analysis of the Two Completely Sequenced Helicobacter pylori Strains (2001) (31)
The GTOP database in 2009: updated content and novel features to expand and deepen insights into protein structures and functions (2008) (30)
Tissue- and stage-dependent dosage compensation on the neo-X chromosome in Drosophila pseudoobscura. (2014) (30)
FARNA: knowledgebase of inferred functions of non-coding RNA transcripts (2016) (30)
[Molecular evolution of viruses]. (1992) (30)
Origins of Japanese flowering cherry (Prunus subgenus Cerasus) cultivars revealed using nuclear SSR markers (2014) (30)
Evolutionary process of amino acid biosynthesis in Corynebacterium at the whole genome level. (2004) (30)
Dynamic Evolution of Endogenous Retrovirus-Derived Genes Expressed in Bovine Conceptuses during the Period of Placentation (2013) (30)
Molecular evolution and phylogeny of the human AIDS viruses LAV, HTLV-III, and ARV (2005) (30)
Formal design and implementation of an improved DDBJ DNA database with a new schema and object-oriented library (1998) (29)
Genome and Transcriptome Analysis of the Food-Yeast Candida utilis (2012) (29)
Cilium evolution: identification of a novel protein, nematocilin, in the mechanosensory cilium of Hydra nematocytes. (2008) (29)
Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria. (2007) (29)
Molecular hierarchy in neurons differentiated from mouse ES cells containing a single human chromosome 21. (2004) (29)
H-InvDB in 2013: an omics study platform for human functional gene and transcript discovery (2012) (28)
Differential evolutionary rates of duplicated genes in protein interaction network. (2006) (28)
A Large Variation in the Rates of Synonymous Substitution for RNA Viruses and Its Relationship to a Diversity of Viral Infection and Transmission Modes (2004) (28)
A simple method for estimating the intensity of purifying selection in protein-coding genes. (1999) (28)
magp4 gene may contribute to the diversification of cichlid morphs and their speciation. (2006) (28)
Molecular evolution of hemagglutinin genes of H1N1 swine and human influenza A viruses (2005) (28)
Genetic Relationships among Japanese, Northern Han, Hui, Uygur, Kazakh, Greek, Saudi Arabian, and Italian Populations Based on Allelic Frequencies at Four VNTR (D1S80, D4S43, COL2A1, D17S5) and One STR (ACTBP2) Loci (1998) (27)
Local function of urokinase receptor at the adhesion contact sites of a metastatic tumor cell. (1990) (27)
DDBJ working on evaluation and classification of bacterial genes in INSDC (2006) (27)
Metabolic Architecture of the Deep Ocean Microbiome (2019) (27)
Phylogenetic analysis of Vietnamese isolates of feline immunodeficiency virus: genetic diversity of subtype C (2003) (27)
Structure and developmental expression of the ascidian TRP gene: Insights into the evolution of pigment cell–specific gene expression (1999) (27)
Multiple class I loci expressed by the quail Mhc (1999) (26)
Differential sensitivity of hepatitis C virus quasispecies to interferon-α therapy (1994) (26)
Compensatory change of interacting amino acids in the coevolution of transcriptional coactivator MBF1 and TATA-box-binding protein. (2007) (26)
Codon usage tabulated from the GenBank genetic sequence data. (1992) (26)
Positively selected amino acid sites in the entire coding region of hepatitis C virus subtype 1b. (2001) (26)
Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. (2005) (26)
NRSub: a non-redundant data base for the Bacillus subtilis genome. (1994) (26)
Genetic Stability of Human T Lymphotropic Virus Type I despite Antiviral Pressures by CTLs1 (2007) (25)
Comparative genome and transcriptome analysis of diatom, Skeletonema costatum, reveals evolution of genes for harmful algal bloom (2018) (25)
An alternative, zeaxanthin epoxidase-independent abscisic acid biosynthetic pathway in plants. (2021) (25)
Specific expression of Gsta4 in mouse cochlear melanocytes: a novel role for hearing and melanocyte differentiation (2009) (25)
Investigation of protein functions through data-mining on integrated human transcriptome database, H-Invitational database (H-InvDB). (2005) (24)
Distinct clustering of mitochondrial DNA types among Japanese, Caucasians and Negroes (1986) (24)
Cancer‐related mutations in BRCA1‐BRCT cause long‐range structural changes in protein–protein binding sites: A molecular dynamics study (2006) (24)
Nucleotide Substitution Rates of HIV-1 (1998) (24)
Functional interrogation of Plasmodium genus metabolism identifies species- and stage-specific differences in nutrient essentiality and drug targeting (2018) (24)
Atherosclerosis Linked to Aberrant Amino Acid Metabolism and Immunosuppressive Amino Acid Catabolizing Enzymes (2020) (24)
Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts (2015) (24)
Functional Pangenome Analysis Shows Key Features of E Protein Are Preserved in SARS and SARS-CoV-2 (2020) (23)
A genome-wide survey of the genes for planar polarity signaling or convergent extension-related genes in Ciona intestinalis and phylogenetic comparisons of evolutionary conserved signaling components. (2003) (23)
Radical amino acid change versus positive selection in the evolution of viral envelope proteins. (2006) (23)
Mitochondrial DNA polymorphism in Japanese (2004) (23)
Proteomic signatures and aberrations of mouse embryonic stem cells containing a single human chromosome 21 in neuronal differentiation: An in vitro model of down syndrome (2004) (23)
Relative contributions of germline gene variation and somatic mutation to immunoglobulin diversity in the mouse. (1986) (23)
Comparison of Gene Expression Profile of Epiretinal Membranes Obtained from Eyes with Proliferative Vitreoretinopathy to That of Secondary Epiretinal Membranes (2013) (22)
Different Endosymbiotic Interactions in Two Hydra Species Reflect the Evolutionary History of Endosymbiosis (2016) (22)
Evolutionary Implications of Mitochondrial DNA Polymorphism in Human Populations (1987) (22)
Identification of neurotransmitter receptor genes under significantly relaxed selective constraint by orthologous gene comparisons between humans and rodents. (2002) (22)
Exploration and grading of possible genes from 183 bacterial strains by a common protocol to identification of new genes: Gene Trek in Prokaryote Space (GTPS). (2006) (22)
Regionalized nervous system in Hydra and the mechanism of its development. (2019) (22)
Evolution of metabolic networks by gain and loss of enzymatic reaction in eukaryotes. (2006) (21)
Molecular evolution of serine protease and its inhibitor with special reference to domain evolution. (1994) (21)
Monitoring of the toxic dinoflagellate Alexandrium catenella in Osaka Bay, Japan using a massively parallel sequencing (MPS)-based technique. (2019) (21)
Dynamic Evolution of Genomes and the Concept of Genome Space (1999) (21)
Evolution of heteromorphic sex chromosomes in the order Aulopiformes. (2000) (20)
Comparative miRNAs analysis of Two contrasting broccoli inbred lines with divergent head-forming capacity under temperature stress (2015) (20)
SenWave: Monitoring the Global Sentiments under the COVID-19 Pandemic (2020) (20)
The bioinformatics challenges in comparative analysis of cereal genomes—an overview (2004) (20)
The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms (2004) (20)
Single-cell technologies in environmental omics. (2016) (20)
Molecular characterization of the Pb recombination hotspot in the mouse major histocompatibility complex class II region. (2002) (20)
A low rate of nucleotide changes in Escherichia coli K‐12 estimated from a comparison of the genome sequences between two different substrains (1999) (20)
DNA Data Bank of Japan dealing with large-scale data submission (1999) (19)
Splice2Deep: An ensemble of deep convolutional neural networks for improved splice site prediction in genomic DNA (2020) (19)
Evolutionarily conserved transcription factor Apontic controls the G1/S progression by inducing cyclin E during eye development (2014) (19)
Clone identification in Japanese flowering cherry (Prunus subgenus Cerasus) cultivars using nuclear SSR markers (2012) (19)
Computational analysis and functional expression of ancestral copepod luciferase. (2013) (19)
Gene expression profile of fibrovascular membranes from patients with proliferative diabetic retinopathy (2009) (19)
Angiotensin–Converting Enzyme (ACE) 1 Gene Polymorphism and Phenotypic Expression of COVID-19 Symptoms (2021) (19)
Evolutionary pathways of N2 neuraminidases of swine and human influenza A viruses: origin of the neuraminidase genes of two reassortants (H1N2) isolated from pigs. (1991) (19)
Dopamine Receptor Genes and Evolutionary Differentiation in the Domestication of Fighting Cocks and Long-Crowing Chickens (2014) (19)
Methods for incorporating the hypermutability of CpG dinucleotides in detecting natural selection operating at the amino acid sequence level. (2009) (19)
In silico exploration of Red Sea Bacillus genomes for natural product biosynthetic gene clusters (2018) (19)
Databases of the marine metagenomics. (2016) (19)
Evolutionary origin of numerous kringles in human and simian apolipoprotein(a) (1991) (18)
Evolutionary pattern of gene homogenization between primate-specific paralogs after human and macaque speciation using the 4-2-4 method. (2010) (18)
Significant differences between the G+C content of synonymous codons in orthologous genes and the genomic G+C content. (1999) (18)
The transcript repeat element: the human Alu sequence as a component of gene networks influencing cancer (2010) (18)
Isolation and characterization of cDNA clones for Japanese quail (Coturnix japonica) major histocompatibility complex (MhcCoja) class I molecules (2004) (18)
Molecular evolution of human T-cell leukemia virus (1990) (17)
Bacterial features in the genome of Methanococcus jannaschii in terms of gene composition and biased base composition in ORFs and their surrounding regions. (1997) (17)
Codonusagetabulated fromtheGenBankgenetic sequence data (1991) (17)
Evolutionary Transitions of MicroRNA-Target Pairs (2016) (17)
Up‐regulation of human T lymphotropic virus type 1 (HTLV‐1) tax/rex mRNA in infected lung tissues (2000) (17)
Evolutionary origin of a Kunitz-type trypsin inhibitor domain inserted in the amyloid β precursor protein of Alzheimer's disease (1992) (17)
Evolution of protein-protein interaction network. (2007) (17)
Ontology-based prediction of cancer driver genes (2019) (17)
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Adaptive divergence with gene flow in incipient speciation of Miscanthus floridulus/sinensis complex (Poaceae). (2014) (16)
Comparative molecular analysis of HTLV-I proviral DNA in HTLV-I infected members of a family with a discordant HTLV-I-associated myelopathy in monozygotic twins. (2000) (16)
How can human and simian immunodeficiency viruses utilize chemokine receptors as their coreceptors? (2000) (16)
TOWARDS COORDINATED INTERNATIONAL SUPPORT OF CORE DATA RESOURCES FOR THE LIFE SCIENCES (2017) (16)
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DNA Profiling Methods and Tools: A Review (2017) (16)
Rapid evolution of SARS-CoV-2 challenges human defenses (2021) (15)
The Promoter Signatures in Rice LEA Genes Can Be Used to Build a Co-expressing LEA Gene Network (2008) (15)
Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome. (2007) (15)
Evolutionary history of dog rabies in Brazil. (2011) (15)
Intragenic Variation of Synonymous Substitution Rates Is Caused by Nonrandom Mutations at Methylated CpG (2001) (15)
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The Search for the Origin of Cnidarian Nematocysts in Dinoflagellates (2008) (14)
DESM: portal for microbial knowledge exploration systems (2015) (14)
A New Database (GCD) on Genome Composition for Eukaryote and Prokaryote Genome Sequences and Their Initial Analyses (2012) (14)
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Optimized ancestral state reconstruction using Sankoff parsimony (2009) (13)
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A prioritization analysis of disease association by data-mining of functional annotation of human genes. (2012) (13)
SEMANTIC MEDIAWIKI: A USER-ORIENTED SYSTEM FOR INTEGRATED CONTENT AND METADATA MANAGEMENT SYSTEM (2005) (13)
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Different evolutionary histories of kringle and protease domains in serine proteases: A typical example of domain evolution (1995) (13)
The X Files: “The Mystery of X Chromosome Instability in Alzheimer’s Disease” (2020) (13)
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Estimation of ancestral gene set of bilaterian animals and its implication to dynamic change of gene content in bilaterian evolution. (2005) (12)
Identification of a ribonuclease H gene in both Mycoplasma genitalium and Mycoplasma pneumoniae by a new method for exhaustive identification of ORFs in the complete genome sequences (1999) (12)
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Molecular evolution of myelin proteolipid protein. (1997) (12)
Building a bio-based industry in the Middle East through harnessing the potential of the Red Sea biodiversity (2017) (12)
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MetaCancer: A deep learning-based pan-cancer metastasis prediction model developed using multi-omics data (2021) (11)
Functional conservation of the promoter regions of vertebrate tyrosinase genes. (2001) (11)
Corrigendum: The genome of Chenopodium quinoa (2017) (11)
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Pigment cell-specific expression of the tyrosinase gene in ascidians has a different regulatory mechanism from vertebrates. (2000) (11)
Rapid Evolution of Plastic-degrading Enzymes Prevalent in the Global Ocean (2020) (11)
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Protein polymorphism and fluctuation of environments. (1979) (11)
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In silico screening for candidate chassis strains of free fatty acid-producing cyanobacteria (2017) (10)
DTi2Vec: Drug–target interaction prediction using network embedding and ensemble learning (2021) (10)
The origin of nucleus: rebuild from the prokaryotic ancestors of ribosome export factors. (2008) (10)
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Construction of molecular evolutionary phylogenetic trees from DNA sequences based on minimum complexity principle. (1995) (10)
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Accelerated pseudogenization on the neo-X chromosome in Drosophila miranda (2016) (10)
Viva Europa, a Land of Excellence in Research and Innovation for Health and Wellbeing (2017) (10)
A comprehensive survey of human polymorphisms at conserved splice dinucleotides and its evolutionary relationship with alternative splicing (2010) (10)
Functional pangenome analysis points to protein E, a pathogenicity determinant in SARS, as a therapeutic target for COVID-19 complications (2020) (10)
Inferring the direction of evolutionary changes of genomic base composition. (1999) (9)
Pigment cell lineage-specific expression activity of the ascidian tyrosinase-related gene. (2004) (9)
Basin-scale seasonal changes in marine free-living bacterioplankton community in the Ofunato Bay. (2018) (9)
Patterns of nucleotide substitutions and implications for the immunological diversity of human immunodeficiency virus (1989) (9)
Functional pangenome analysis suggests inhibition of the protein E as a readily available therapy for COVID-2019 (2020) (9)
Speciation of two gobioid species, Pterogobius elapoides and Pterogobius zonoleucus revealed by multi-locus nuclear and mitochondrial DNA analyses. (2016) (9)
Corrigendum: Biased biological functions of horizontally transfered genes in prokaryotic genomes (2004) (9)
Two-step evolution of endosymbiosis between hydra and algae. (2016) (9)
Nucleotide sequence and molecular evolution of mouse retrovirus-like IAP elements. (1987) (8)
Metagenome-based diversity analyses suggest a strong locality signal for bacterial communities associated with oyster aquaculture farms in Ofunato Bay. (2018) (8)
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Seawater desalination based drinking water: microbial characterization during distribution with and without residual chlorine (2021) (8)
Whole-Genome Sequencing of 84 Japanese Eels Reveals Evidence against Panmixia and Support for Sympatric Speciation (2018) (8)
Sequencing effort dictates gene discovery in marine microbial metagenomes (2020) (8)
What is the right sequencing approach? Solo VS extended family analysis in consanguineous populations (2020) (8)
Patterns of nucleotide substitutions inferred from the phylogenies of the class I major histocompatibility complex genes (1992) (8)
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Mutation pattern of human immunodeficiency virus gene. (1991) (8)
Correction: Comparison of Gene Expression Profile of Epiretinal Membranes Obtained from Eyes with Proliferative Vitreoretinopathy to That of Secondary Epiretinal Membranes (2013) (8)
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Re-infection with a different SARS-CoV-2 clade and prolonged viral shedding in a hematopoietic stem cell transplantation patient (2021) (8)
Genomic annotation of 15,809 ESTs identified from pooled early gestation human eyes. (2006) (8)
Notes on the Maximum Likelihood Estimation of Haplotype Frequencies (2004) (7)
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Affinity2Vec: drug-target binding affinity prediction through representation learning, graph mining, and machine learning (2022) (7)
Molecular evolutionary rates of oncogenes (2005) (7)
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Integrated Metabolic Modeling, Culturing, and Transcriptomics Explain Enhanced Virulence of Vibrio cholerae during Coinfection with Enterotoxigenic Escherichia coli (2020) (7)
Father‐to‐Mother‐to‐Infant Transmission of HIV‐1: Clonally Transmitted Isolate of Infant Mutates More Rapidly than That of the Mother and Rapidly Loses Reactivity with Neutralizing Antibody (1997) (7)
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A Survey of Methods and Tools for Large-Scale DNA Mixture Profiling (2019) (7)
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Sexual transmission of Hepatitis C virus (1994) (6)
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Coevolution of Axon Guidance Molecule Slit and Its Receptor Robo (2014) (6)
Topology Selection in Unrooted Molecular Phylogenetic Tree By Minimum Model-Based Complexity Method (1998) (6)
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YAMATO and ASUKA: DNA database management system (1995) (6)
Six strains of human immunodeficiency virus type 1 isolated in Japan and their molecular phylogeny (1992) (6)
Gene-by-Gene or Localized Dosage Compensation on the Neo-X Chromosome in Drosophila miranda (2018) (6)
Two different classes of co-occurring motif pairs found by a novel visualization method in human promoter regions (2008) (6)
DIVERSITY IN HUMAN MHC GENES AMONG ETHNIC GROUPS WORLDWIDE (1996) (5)
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Transmission dynamics of SARS-CoV-2 on the Diamond Princess uncovered using viral genome sequence analysis (2021) (5)
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Codon usage tabulated from the GenBank genetic sequence data. (1986) (5)
Genome sequencing and identification of cellulase genes in Bacillus paralicheniformis strains from the Red Sea (2021) (5)
The non-redundant Bacillus subtilis (NRSub) database: update 1998 (1998) (5)
ODEN-A Computer System for Molecular Evolutionary Analysis and Database Search of DNA and Amino Acid Sequences (1991) (5)
Inference of Molecular Phylogenetic Tree Based on Minimum Model-Based Complexity Method (1997) (5)
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Validation of the application of gel beads-based single-cell genome sequencing platform to soil and seawater (2022) (4)
SAKURA: A New Data Submission System of DDBJ to Meet Users' Needs in the Age of Mass Production of DNA Sequences (1996) (4)
Identification of a dual orange/far-red and blue light photoreceptor from an oceanic green picoplankton (2021) (4)
Development of a time-series shotgun metagenomics database for monitoring microbial communities at the Pacific coast of Japan (2021) (4)
Homology of kringle structures in urokinase and tissue-type plasminogen activator: the phylogeny with the related serine proteases. (1985) (4)
Detection of Processed Pseudogenes Based on cDNA Mapping to the Human Genome (2003) (4)
Predicting Bone Metastasis Using Gene Expression-Based Machine Learning Models (2021) (4)
COVID-19 and beyond: a call for action and audacious solidarity to all the citizens and nations, it is humanity’s fight (2020) (4)
DES-ROD: Exploring Literature to Develop New Links between RNA Oxidation and Human Diseases (2020) (4)
The NRSub database: update 1997 (1997) (4)
Levothyroxine Treatment and the Risk of Cardiac Arrhythmias – Focus on the Patient Submitted to Thyroid Surgery (2021) (4)
Nucleotide diversity within the human major histocompatibility complex: function of hitch-hiking effect, duplications, indels and recombination (2000) (3)
Eukaryotic nuclear structure explains the evolutionary rate difference of ribosome export factors. (2008) (3)
A sequence homology between the pX genes of HTLV‐I/II and the murine IL‐3 gene (1986) (3)
Toward Unification of Taxonomy Databases in a Distributed Environment (1994) (3)
Prediction of Protein-Destabilizing Polymorphisms by Manual Curation with Protein Structure (2012) (3)
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Massively parallel single-cell genome sequencing enables high-resolution analysis of soil and marine microbiome (2020) (3)
Role of C-Reactive Protein in Diabetic Inflammation (2022) (3)
Detection of SARS-CoV-2 variants requires urgent global coordination (2021) (3)
A cautionary signal from the Red Sea on the impact of increased dust activity on marine microbiota (2022) (3)
Evolution of memory system‐related genes (2021) (3)
A single neuron subset governs a single coactive neuron circuit in Hydra vulgaris, representing a possible ancestral feature of neural evolution (2021) (3)
Opening a new era of “Ecological Genetics and Genomics” (2016) (2)
Metagenomic Methods: From Seawater to the Database (2019) (2)
Computational Studies of Auto-Active van der Waals Interaction Molecules on Ultra-Thin Black-Phosphorus Film (2023) (2)
Marine Picoplankton Metagenomes from Eleven Vertical Profiles Obtained by the Malaspina Expedition in the Tropical and Subtropical Oceans (2023) (2)
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H-InvDB release 6, a comprehensive annotation resource for human genes and transcripts (2009) (2)
Homology between P-transposable element of Drosophila melanogaster and bacterial transposase gene of Tn3 (1985) (2)
Correction: Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones (2004) (2)
A Peculiar Binding Characterization of DNA (RNA) Nucleobases at MoOS-Based Janus Biosensor: Dissimilar Facets Role on Selectivity and Sensitivity (2022) (2)
Development and Validation of Reverse Transcriptase Loop-Mediated Isothermal Amplification (RT-LAMP) as a Simple and Rapid Diagnostic Tool for SARS-CoV-2 Detection (2022) (2)
Visualization of Sequence and Biological Data in DNA Data Bank of Japan (1997) (2)
Mining of Knowledge Related to Factors Involved in the Aberrant Growth of Plankton (2019) (2)
Inter-RNA homology and possible roles of small RNAs (2005) (2)
From shallow to deep: some lessons learned from application of machine learning for recognition of functional genomic elements in human genome (2022) (2)
DeepSVP: integration of genotype and phenotype for structural variant prioritization using deep learning (2021) (2)
DNA Sequence Analysis (2009) (2)
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network (2021) (2)
TP Atlas: integration and dissemination of advances in Targeted Proteins Research Program (TPRP)—structural biology project phase II in Japan (2012) (2)
Bidirectional Gene Pairs in the Human Genome (2013) (2)
Processed Pseudogenes and Their Functional Resurrection in the Human and Mouse Genomes (2008) (2)
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Splice2Deep: An ensemble of deep convolutional neural networks for improved splice site prediction in genomic DNA. (2020) (2)
Seasonal and annual changes in the microbial communities of Ofunato Bay, Japan, based on metagenomics (2021) (2)
DES-Tcell is a knowledgebase for exploring immunology-related literature (2021) (1)
Comparative Whole Genome Sequence Analysis of Corynebacteria (2006) (1)
Gene cluster analysis method reliably identifies horizontally transferred genes and reveals their involvement in operon formation (2006) (1)
Marine Metagenomic Sequence Counts of Reads Assigned to Taxa Consistently Proportionate to Read Counts Obtained for per g of Seawater Sample (2019) (1)
The genome of Chenopodium quinoa (vol 542, pg 307, 2017) (2017) (1)
Molecular evolutionary phylogenetic trees based on minimum description length principle (1995) (1)
Correction: Coevolution of Axon Guidance Molecule Slit and Its Receptor Robo (2014) (1)
Characteristic distribution of bases and codons around the initiation and termination codons in whole reading frames in bacteria and yeast genomes. (1997) (1)
YAYOI: Taxonomy Database System over International Computer Networks (1994) (1)
Metagenomic analysis provides functional insights into seasonal change of a non-cyanobacterial prokaryotic community in temperate coastal waters (2021) (1)
Development of New DDBJ DNA Sequence Database with Data Annotation Tool Yamato II (1996) (1)
MetastaSite: Predicting metastasis to different sites using deep learning with gene expression data (2022) (1)
[Molecular evolution of kringles and minikringles found in serine proteases and their inhibitors]. (1987) (1)
Indigenous Arabs have an intermediate frequency of a Neanderthal‐derived COVID‐19 risk haplotype compared with other world populations (2020) (1)
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Genome Network Project: An Integrated Genomic Platform (2009) (1)
Metagenome-based diversity analyses suggest strong locality signal for bacterial communities associated with oyster farms in the Ofunato Bay (2017) (1)
Diabetes and Treatments (2020) (1)
Abundant deep ocean heterotrophic bacteria are culturable (2022) (1)
Evolution of pathogenic viruses with special reference to the rates of synonymous and nonsynonymous substitutions (1994) (1)
A C + + computational environment for biomolecular sequence management (2005) (1)
Building a bio-based industry in the Middle East through harnessing the potential of the Red Sea biodiversity (2017) (1)
Type 2 Diabetes Mellitus and its comorbidity, Alzheimer’s disease: Identifying critical microRNA using machine learning (2023) (1)
In silico exploration of Red Sea Bacillus genomes for natural product biosynthetic gene clusters (2018) (1)
A Preliminary Metagenome Analysis Based on a Combination of Protein Domains (2019) (1)
KAUST Metagenomic Analysis Platform (KMAP), enabling access to massive analytics of re-annotated metagenomic data (2020) (1)
Evolution of nested genes with special reference to cuticle proteins inDrosophila melanogaster (1989) (1)
Estimating the Number of Mouse Genes and the Duplicated Regions within the Mouse Genome (2000) (1)
Integration of Droplet Microfluidic Tools for Single-cell Functional Metagenomics: An Engineering Head Start (2021) (1)
THE EVOLUTIONARY ORIGIN AND PROCESS OF THE CENTRAL NERVOUS SYSTEM : COMPARATIVE GENOMICS APPROACH (2013) (1)
Evolutionary origin of sex-related genes in the mouse brain. (2007) (1)
Transcriptome analysis of the phosphate starvation response sheds light on strigolactone biosynthesis in rice. (2023) (1)
Point Accepted Mutation (2002) (1)
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[Large-scale analysis by full-length cDNA sequences]. (2003) (0)
OncoRTT: Predicting novel oncology-related therapeutic targets using BERT embeddings and omics features (2023) (0)
A Prototype of PubMed Central Japan (2003) (0)
Foreword: Networks and evolution of molecular information (1997) (0)
[Genome biology and DNA data bank]. (1997) (0)
Improvement in the Accuracy of Gene Prediction in Human cDNA Sequences (2003) (0)
Part VI. Summary (1999) (0)
Finding of a novel orthologous group of bacteriorhodopsin characteristic to microbial plant-pathogens or symbionts (2017) (0)
[Evolution based upon genetic information]. (1994) (0)
COVID-19 and beyond: a call for action and audacious solidarity to all the citizens and nations, it is humanity’s fight [version 1; peer review: 3 approved with reservations] (2021) (0)
[Integrated database (2): Data oriented approach to genome network informatics]. (2004) (0)
Issue Information (2022) (0)
Issue Information (2018) (0)
The apocarotenoid metabolite zaxinone regulates growth and strigolactone biosynthesis in rice (2019) (0)
Toward the Genomic-Information Society (2017) (0)
DES-Amyloidoses “Amyloidoses through the looking-glass”: A knowledgebase developed for exploring and linking information related to human amyloid-related diseases (2022) (0)
Issue Information (2015) (0)
A Biological Taxonomy Database System an World-Wide Web (1996) (0)
Comparative miRNAs analysis of Two contrasting broccoli inbred lines with divergent head-forming capacity under temperature stress (2015) (0)
Genome sequencing and identification of cellulase genes in Bacillus paralicheniformis strains from the Red Sea (2021) (0)
Emergence of the layer structure in the mammalian neocortex associated with a change in stem cell dynamics (2009) (0)
Exploiting machine learning models to identify novel Alzheimer’s disease biomarkers and potential targets (2023) (0)
Periodic survey by metagenomic analysis on the marine microbial communities in an enclosed bay locating at Sanriku coast off northern Japan in the Pacific Ocean (2017) (0)
Analysis of marine metagenomic sequence focusing on blue-light photoreceptors (2017) (0)
Biomedical computing in the Arab world (2021) (0)
A comparative analysis of mammalian genomics: Prokaryote and eukaroyte perspectives (2005) (0)
Molecular Evolutionary Classification of Hepatitis C Viruses and their Divergence Times (1994) (0)
Evolutionary features of genomes as disclosed by comparative analysis of complete genome sequences (abstract only) (2000) (0)
Issue Information (2017) (0)
From shallow to deep: some lessons learned from application of machine learning for recognition of functional genomic elements in human genome (2022) (0)
Novel gene cluster analysis method identifies horizontally transferred genes with high reliability and reveals their involvement in operon formation (2005) (0)
Issue Information (2019) (0)
Detecting Linkage between a Trait and a Marker in a Random Mating Population without Pedigree Record (2009) (0)
A cautionary signal from the Red Sea on the impact of increased dust activity on marine microbiota (2022) (0)
Genetic Variability of Major Histocompatibility Complex in Human Populations (1993) (0)
An interactive COVID-19 virus Mutation Tracker (CovMT) with a particular focus on critical mutations in the Receptor Binding Domain (RBD) region of the Spike protein (2021) (0)
Issue Information (2018) (0)
Mining biosynthetic gene clusters in Virgibacillus genomes (2019) (0)
Issue Information (2015) (0)
Prediction of Protein Sub-cellular Localization using Information from Texts and Sequences. (2008) (0)
An open chat with…Takashi Gojobori (2021) (0)
Naturally occuring mutations of HTLV-1 proviral genome within HAM/TSP patients and asymptomatic carriers; the influence of proviral load, host genotype and disease state. (1999) (0)
Influences of Diurnal Sampling Bias on Fixed-Point Monitoring of Plankton Biodiversity Determined Using a Massively Parallel Sequencing-Based Technique (2019) (0)
In Memory of Vladimir B. Bajic (1952-2019). (2021) (0)
Molecular evolution of AIDS viruses. (1988) (0)
Minimum description principle applied to construction of molecular phylogenetic tree. (1995) (0)
S-VAR: A tool and strategy to leverage NGS variants to identify potential drug target (2015) (0)
Evolution of dorsal telencephalic structure associated with changes in neural progenitor regulation (2010) (0)
M olecular B iology and E volution (2013) (0)
Analysis of Crime Data and Finding Frequent Patterns using Hadoop and Data Analytic Techniques (2019) (0)
[Molecular evolution of viruses]. (1996) (0)
Early diagnosis of cancer from liquid biopsies via Raman spectroscopy combined with decision algorithms (Conference Presentation) (2023) (0)
Editor’s Report for Genome Biology and Evolution, 2013 (2013) (0)
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[Genome network]. (2005) (0)
Marine Metagenomics: Technological Aspects and Applications (2019) (0)
Lactate-mediated neural plasticity genes emerged during the evolution of memory systems (2022) (0)
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Computational network analysis of host genetic risk variants of severe COVID-19 (2023) (0)
Human Genome Project: Japanese Perspective (2001) (0)
1P563 Consistent dynamic phenomena in amyloidogenic forms of transthyretin : a molecular dynamics study(27. Molecular dynamics simulation,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) (2006) (0)
[Evolution of molecules involved with neural transmission: in the case of catecholamine receptors and G protein alpha subunits]. (2001) (0)
Novel Glycoprotein, gp34, That Is Specifically Induced by the Human T-Cell Leukemia Virus Type I Transactivator p4Otax (2004) (0)
Introduction to the Special Series (2011) (0)
COVID-19 and beyond: a call for action and audacious solidarity to all the citizens and nations, it is humanity’s fight [version 1; peer review: awaiting peer review] (2020) (0)
Comparative Marine Matagenomics in the Red Sea (2016) (0)
[Mini review] metagenomic studies of the Red Sea (2015) (0)
Issue Information (2017) (0)
Building and Searching DNA Data Base on a Relational Model (1992) (0)
Significant variants of type 2 diabetes in the Arabian Region through an Integration of exome databases (2021) (0)
Acquisition of metagenomic sequences from seawater and analysis of archaea (2016) (0)
High-resolution Introgressive Region Map Reveals Spatiotemporal Genome Evolution in Asian Rice Domestication (2019) (0)
The three domesticated varieties examined in this study. (2014) (0)
during the Period of Placentation (2013) (0)
Origins of Japanese flowering cherry (Prunus subgenus Cerasus) cultivars revealed using nuclear SSR markers (2014) (0)
Synergy of Small Antiviral Molecules on a Black-Phosphorus Nanocarrier: Machine Learning and Quantum Chemical Simulation Insights (2023) (0)
Issue Information (2016) (0)
Evolutionary pathways of N 2 neuraminidases of swine and human influenza A viruses : origin of the neuraminidase genes of two reassortants ( H 1 N 2 ) isolated from pigs (2007) (0)
User Ranking Based Social Network Platform for Cloud Environment (2015) (0)
PATTERNS OF AMINO ACID SUBSTITUTIONS IN THE THIRD VARIABLE ENVELOPE REGION OF HIV WITHIN SINGLE HOSTS (1995) (0)
Environmental distribution analysis of prokaryotic glycoside hydrolases using metagenomes (2016) (0)
Molecular Phylogenetic Trees are Inferred by Using Minimum Model-Based Complexity (1997) (0)
Genome-Scale Detection of Tandemly-Duplicated Gene Structures (2003) (0)
Human genome network platform: a resource for TFRN analysis. (2014) (0)
Unveiling of a novel bifunctional photoreceptor, Dualchrome1, isolated from a cosmopolitan green alga (2020) (0)
Extensive single-cell genomics reveals bacterial diversity and diverse phage host ranges in the area in and around the Red Sea (2022) (0)
1P001 Cancer-related Mutations in BRCA1-BRCT Cause Structural Changes in Protein-Protein Binding Sites : A Molecular Dynamics Study (2005) (0)
COVID-19 and Beyond: A Call for Action and Audacious Solidarity to All the Citizens and Nations, It Is Humanity’s Fight (2020) (0)
3P283 Effects of alternative splicing on protein 3D structures (2004) (0)
Issue information (2018) (0)
Author Correction: Identification of a dual orange/far-red and blue light photoreceptor from an oceanic green picoplankton (2021) (0)
Genome Biology and Evolution (2009) (0)
Rise and fall of the global conversation and shifting sentiments during the COVID-19 pandemic (2021) (0)
Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts (2015) (0)
Positive selection causes purifying selection (reply) (1982) (0)
Alignment of the amino acid sequences corresponding to DRD4 exon 1 for the four Phasianid groups. (2014) (0)
Prediction of miRNAs and their target genes (2005) (0)
Intragenic variation of synonymous substitution rates and its evolutionary implication (1999) (0)
Author Correction: DES-Tcell is a knowledgebase for exploring immunology-related literature (2021) (0)
Issue Information (2018) (0)
Systems-biology guided identification of metabolic genes implicated in the activation of T-cells (2016) (0)
Issue Information (2018) (0)
Selection pressure on human STR loci and its relevance in repeat expansion disease (2016) (0)
1M1100 Analysis of neural Immunoglobulin superfamily cell adhesion molecules in Planarian (2002) (0)
Amphiprion percula isolate:AP_NGBR_F1_2018 Genome sequencing and assembly (2018) (0)
Evolutionary Study of Long Term MemoryAssociated Genes Including Lactate Mediated Neural Plasticity genes (2019) (0)
Publisher Correction: KAUST Metagenomic Analysis Platform (KMAP), enabling access to massive analytics of re-annotated metagenomic data (2021) (0)
Issue Information (2018) (0)
Analysis of the primitive neural IgCAMs in planarian (2003) (0)
A single neuron subset governs a single coactive neuron circuit in Hydra vulgaris, representing a prototypic feature of neural evolution (2020) (0)
Single Cell Genomics in Marine Omics (2014) (0)
Editorial Board (2014) (0)
Distribution of bacteriorhodopsin in prokaryotes by horizontal gene transfer (2015) (0)
Comparative genome and transcriptome analysis of diatom, Skeletonema costatum, reveals evolution of genes for harmful algal bloom (2018) (0)
Behavioral and neurotranscriptomic synchronization v1 (2019) (0)
Horizontal Gene Transfer (2002) (0)
Zuckerkandl Prize (2001) (0)
キイロショウジョウバエP因子のORFsとバクテリア・トランスポゾンTn3のTnpAとの相同性〔英文〕 (1985) (0)
Balancing excellence and utility (2015) (0)
In Memory of Vladimir B. Bajic (1952–2019) (2019) (0)
Inferring the direction of evolutionary changes of genomic base composition: Erratum (1999) (0)
Expressed Sequence Tag Analysis of Epiretinal Membranes from Patients with Proliferative Vitreoretinopathy (2011) (0)
Issue Information (2019) (0)
HGM2008 plenary abstracts: genome informatics to genome biology (2009) (0)
Evolutionary pattern of genes revealed by intragenic variation of synonymous substitution rates (1998) (0)
Evolutionary change of the GC content after speciation (1999) (0)
In silico screening for candidate chassis strains of free fatty acid-producing cyanobacteria (2017) (0)
A trial of metagenome analysis of micro flora in the aquatic environment with DNA micro Array (2009) (0)
Chenopodium suecicum isolate:BYU_1480 Genome sequencing and assembly (2016) (0)
Analysis of Horizontal Gene Transfer and Clustering of Microbial ORFs by Use of a GRID Environment (2003) (0)
Issue Information (2018) (0)
International Symposium 'Evolution 2000'. A symposium dedicated to the memory of Dr. Susumu Ohno, Tokyo, Japan, March 5-7, 2000. (2000) (0)
Characterization of microbiologically influenced corrosion in pipelines by using metagenomics (2019) (0)
What is the right sequencing approach? Solo VS extended family analysis in consanguineous populations (2020) (0)
Genomic Exploration of the RNA Continent (2011) (0)
Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities (2021) (0)
[Genomic evolution of pathogenic bacteria and horizontal gene transfer]. (2002) (0)
A LARGE-SCALE SEARCH FOR THE WITHIN-GENE REGIONS WHERE POSITIVE SELECTION MAY OPERATE (1995) (0)
Integrated Metabolic Modeling, Culturing, and Transcriptomics Explain Enhanced Virulence of <named-content content-type='genus-species'>Vibrio cholerae</named-content> during Coinfection with Enterotoxigenic <named-content content-type='genus-species'>Escherichia coli</named-content> (2020) (0)
Concerted evolution of the immunoglobulin VH multigene family. (1985) (0)
Molecular Phylogeny and Evolution of Primate Mitochondrial DNA 1 (1998) (0)
The Application of Model-based Complexity Inference Method to Molecular Evolution Analysis (1998) (0)
Issue Information (2017) (0)
DDBJ Activities: Contribution to the Research in Information Biology (2009) (0)
MOLECULAR EVOLUTION OF POU-HOMEO PROTEIN AS A MOSAIC PROTEIN (1995) (0)
H-InvDB: A Comprehensive Annotation Resource For Human Transcriptome (2010) (0)
[Molecular evolutionary analysis of hepatitis C virus--detection of positive selective sites]. (2004) (0)
gLdraw: A General Tool for a Comparison of Chromosome Maps (2001) (0)
Development of HIV Infectious Diseases Integrated Database (2004) (0)
Evolutionary Patterns of Recently Emerged Animal (2011) (0)
Author Correction: Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network (2022) (0)
Molecular Cloning andCharacterization ofa NovelGlycoprotein, gp34, ThatIsSpecifically Induced bytheHumanT-Cell Leukemia Virus TypeITransactivator p4Otax (1991) (0)
Comprehensive evolutionary analysis and nomenclature of plant G3BPs (2022) (0)
Obituary - Susumu Ohno 1928-2000 (2000) (0)
Integration of Gene Expression Profiles into the Visualized Data Management System (2006) (0)
Big Data Analysis of Human Genome Variations (2016) (0)
Issue Information (2018) (0)
Integrated metabolic modeling, culturing and transcriptomics explains enhanced virulence of V. cholerae during co-infection with ETEC (2019) (0)
Expressed Sequence Tag Analysis of Fibrovascular Membranes from Patients with Proliferative Diabetic Retinopathy (2009) (0)
Title: A large variation in the rates of synonymous substitution for RNA (2004) (0)
Evolution of small molecule neurotransmission in animals (2018) (0)
Monitoring harmful microalgal species and their appearance in Tokyo Bay, Japan, using metabarcoding (2022) (0)
Permeable observations of multifactor database for transcription network (2005) (0)

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