Tim Peto

Q: What Schools Are Affiliated With Tim Peto

Tim Peto is affiliated with the following schools: University of Oxford, University of Wales

Tim Peto's AcademicInfluence.com Rankings

Tim Peto

Medical

#1811

World Rank

#2187

Historical Rank

Epidemiology

#288

World Rank

#305

Historical Rank

medical Degrees

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Medical

Tim Peto's Degrees

PhD Epidemiology University of Oxford

Why Is Tim Peto Influential?

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According to Wikipedia, Timothy Edward Alexander Peto is a professor of medicine at the University of Oxford. He is the co-leader for the Infection Theme of the Oxford Biomedical Research Centre, and a National Institute for Health and Care Research Senior Investigator.

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Tim Peto's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Artesunate versus quinine in the treatment of severe falciparum malaria in African children (AQUAMAT): an open-label, randomised trial (2010) (841)
Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity (2020) (819)
Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England (2021) (806)
U.K. Controlled trial of intrapleural streptokinase for pleural infection. (2005) (737)
Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study (2013) (718)
Antibody Status and Incidence of SARS-CoV-2 Infection in Health Care Workers (2020) (706)
Prospective Evaluation of Criteria for Microbiological Diagnosis of Prosthetic-Joint Infection at Revision Arthroplasty (1998) (686)
Transforming clinical microbiology with bacterial genome sequencing (2012) (666)
SARS-CoV-2 evolution during treatment of chronic infection (2021) (647)
Clonal relationships between invasive and carriage Streptococcus pneumoniae and serotype- and clone-specific differences in invasive disease potential. (2003) (640)
Enhanced T-cell immunogenicity of plasmid DNA vaccines boosted by recombinant modified vaccinia virus Ankara in humans (2003) (607)
Iron and infection. (1988) (601)
Diverse sources of C. difficile infection identified on whole-genome sequencing. (2013) (584)
Cognitive behaviour therapy for the chronic fatigue syndrome: a randomised controlled trial (1996) (506)
Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B.1.617.2) compared with alpha (B.1.1.7) variants of concern: a cohort study (2021) (488)
Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study (2015) (480)
Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis (2015) (419)
Temporal and geographic stability of the serogroup-specific invasive disease potential of Streptococcus pneumoniae in children. (2004) (359)
The role of whole genome sequencing in antimicrobial susceptibility testing of bacteria: report from the EUCAST Subcommittee. (2017) (346)
Performance characteristics of five immunoassays for SARS-CoV-2: a head-to-head benchmark comparison (2020) (331)
Within-host evolution of bacterial pathogens (2016) (313)
Effect of Delta variant on viral burden and vaccine effectiveness against new SARS-CoV-2 infections in the UK (2021) (312)
alpha+-Thalassemia protects children against disease caused by other infections as well as malaria. (1997) (307)
Prediction of Staphylococcus aureus Antimicrobial Resistance by Whole-Genome Sequencing (2014) (301)
Prediction of Susceptibility to First‐Line Tuberculosis Drugs by DNA Sequencing (2018) (295)
Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B.1.1.7 (2021) (285)
Same-Day Diagnostic and Surveillance Data for Tuberculosis via Whole-Genome Sequencing of Direct Respiratory Samples (2016) (280)
Capsular serotype-specific attack rates and duration of carriage of Streptococcus pneumoniae in a population of children. (2006) (272)
Corticosteroids for bacterial meningitis in adults in sub-Saharan Africa. (2007) (270)
Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data (2013) (270)
A Candida auris Outbreak and Its Control in an Intensive Care Setting (2018) (259)
Negative epistasis between the malaria-protective effects of α+-thalassemia and the sickle cell trait (2005) (259)
Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease (2012) (259)
A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance (2012) (258)
Effects of control interventions on Clostridium difficile infection in England: an observational study (2017) (252)
Fidaxomicin Versus Vancomycin for Clostridium difficile Infection: Meta-analysis of Pivotal Randomized Controlled Trials (2012) (250)
Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131 (2015) (250)
FREQUENCY OF SEVERE NEUTROPENIA ASSOCIATED WITH AMODIAQUINE PROPHYLAXIS AGAINST MALARIA (1986) (241)
Characterisation of Clostridium difficile Hospital Ward–Based Transmission Using Extensive Epidemiological Data and Molecular Typing (2012) (238)
Gonorrhoea treatment failure caused by a Neisseria gonorrhoeae strain with combined ceftriaxone and high-level azithromycin resistance, England, February 2018 (2018) (237)
Pneumococcal Conjugate and Plain Polysaccharide Vaccines Have Divergent Effects on Antigen-Specific B Cells (2012) (233)
Adjunctive dexamethasone in bacterial meningitis: a meta-analysis of individual patient data (2010) (225)
SARS-CoV-2 within-host diversity and transmission (2021) (219)
Multilocus Sequence Typing of Clostridium difficile (2009) (219)
Antibody testing for COVID-19: A report from the National COVID Scientific Advisory Panel (2020) (218)
Impact of vaccination on new SARS-CoV-2 infections in the United Kingdom (2021) (211)
The antibiotic course has had its day (2017) (210)
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission (2012) (209)
Mortality after Staphylococcus aureus bacteraemia in two hospitals in Oxfordshire, 1997-2003: cohort study (2006) (209)
Relationship Between Bacterial Strain Type, Host Biomarkers, and Mortality in Clostridium difficile Infection (2013) (206)
Nested Russian Doll-Like Genetic Mobility Drives Rapid Dissemination of the Carbapenem Resistance Gene blaKPC (2015) (205)
Physical, cognitive, and mental health impacts of COVID-19 after hospitalisation (PHOSP-COVID): a UK multicentre, prospective cohort study (2021) (201)
Identifying lineage effects when controlling for population structure improves power in bacterial association studies (2015) (201)
Predictors of First Recurrence of Clostridium difficile Infection: Implications for Initial Management (2012) (196)
Antibody responses to SARS-CoV-2 vaccines in 45,965 adults from the general population of the United Kingdom (2021) (196)
The Hospital Water Environment as a Reservoir for Carbapenem-Resistant Organisms Causing Hospital-Acquired Infections—A Systematic Review of the Literature (2017) (194)
Assessment of Mycobacterium tuberculosis transmission in Oxfordshire, UK, 2007–12, with whole pathogen genome sequences: an observational study (2014) (194)
Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study (2020) (187)
Effect of Covid-19 Vaccination on Transmission of Alpha and Delta Variants (2022) (184)
Within-Host Evolution of Staphylococcus aureus during Asymptomatic Carriage (2013) (180)
Prevention of cerebral malaria in children in Papua New Guinea by southeast Asian ovalocytosis band 3. (1999) (169)
Diagnosis of viral infections of the central nervous system: clinical interpretation of PCR results (1997) (168)
Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis (2016) (166)
Calculation of liver-to-blood inocula, parasite growth rates, and preerythrocytic vaccine efficacy, from serial quantitative polymerase chain reaction studies of volunteers challenged with malaria sporozoites. (2005) (164)
High incidence of malaria in α-thalassaemic children (1996) (163)
Clinical Clostridium difficile: Clonality and Pathogenicity Locus Diversity (2011) (159)
Hyperinvasive Neonatal Group B Streptococcus Has Arisen from a Bovine Ancestor (2004) (150)
Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes (2019) (147)
Evolutionary History of the Clostridium difficile Pathogenicity Locus (2013) (146)
WGS to predict antibiotic MICs for Neisseria gonorrhoeae (2017) (144)
Transferable Antibiotic Resistance Elements in Haemophilus influenzae Share a Common Evolutionary Origin with a Diverse Family of Syntenic Genomic Islands (2004) (141)
The interaction between Plasmodium falciparum and P. vivax in children on Espiritu Santo island, Vanuatu. (1996) (140)
Plasmid Classification in an Era of Whole-Genome Sequencing: Application in Studies of Antibiotic Resistance Epidemiology (2017) (138)
Impact of Delta on viral burden and vaccine effectiveness against new SARS-CoV-2 infections in the UK (2021) (135)
Whole-Genome Sequencing Shows That Patient-to-Patient Transmission Rarely Accounts for Acquisition of Staphylococcus aureus in an Intensive Care Unit (2013) (135)
The Duration, Dynamics, and Determinants of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Antibody Responses in Individual Healthcare Workers (2021) (134)
Whole-genome sequencing to determine transmission of Neisseria gonorrhoeae: an observational study. (2016) (133)
Cross-reactive cytotoxic T lymphocytes against a HIV-1 p24 epitope in slow progressors with B*57 (2002) (133)
Transmission of Staphylococcus aureus between health-care workers, the environment, and patients in an intensive care unit: a longitudinal cohort study based on whole-genome sequencing (2017) (133)
Relation between lymphopenia and bacteraemia in UK adults with medical emergencies (2004) (131)
Asymptomatic Clostridium difficile Colonisation and Onward Transmission (2013) (130)
Deferoxamine inhibition of malaria is independent of host iron status (1988) (127)
Microbiological lung surveillance in mechanically ventilated patients, using non-directed bronchial lavage and quantitative culture. (1993) (126)
Mobile elements drive recombination hotspots in the core genome of Staphylococcus aureus (2014) (125)
Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae at a Single Institution: Insights into Endemicity from Whole-Genome Sequencing (2015) (125)
Clarifying the evidence on SARS-CoV-2 antigen rapid tests in public health responses to COVID-19 (2021) (124)
Hybrid Vibrio vulnificus (2005) (121)
Analysis of the human alpha-globin gene cluster reveals a highly informative genetic locus. (1986) (118)
Molecular Diagnosis of Orthopedic-Device-Related Infection Directly from Sonication Fluid by Metagenomic Sequencing (2017) (117)
Genome Sequencing of an Extended Series of NDM-Producing Klebsiella pneumoniae Isolates from Neonatal Infections in a Nepali Hospital Characterizes the Extent of Community- versus Hospital-Associated Transmission in an Endemic Setting (2014) (116)
Insidious Risk of Severe Mycobacterium chimaera Infection in Cardiac Surgery Patients (2017) (115)
The duration, dynamics and determinants of SARS-CoV-2 antibody responses in individual healthcare workers (2020) (114)
Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event (2012) (109)
Mortality risks associated with emergency admissions during weekends and public holidays: an analysis of electronic health records (2017) (109)
Enhanced invasiveness of bovine-derived neonatal sequence type 17 group B streptococcus is independent of capsular serotype. (2006) (106)
COVID-19: Rapid antigen detection for SARS-CoV-2 by lateral flow assay: A national systematic evaluation of sensitivity and specificity for mass-testing (2021) (106)
COVID-19: Rapid antigen detection for SARS-CoV-2 by lateral flow assay: A national systematic evaluation of sensitivity and specificity for mass-testing (2021) (106)
Evaluation of antibody testing for SARS-Cov-2 using ELISA and lateral flow immunoassays (2020) (104)
A randomized study comparing combined pneumococcal conjugate and polysaccharide vaccination schedules in adults. (2011) (101)
Safety of DNA and modified vaccinia virus Ankara vaccines against liver-stage P. falciparum malaria in non-immune volunteers. (2003) (100)
A cluster of multidrug-resistant Mycobacterium tuberculosis among patients arriving in Europe from the Horn of Africa: a molecular epidemiological study (2018) (100)
Metagenomic Nanopore Sequencing of Influenza Virus Direct from Clinical Respiratory Samples (2019) (99)
Community prevalence of SARS-CoV-2 in England from April to November, 2020: results from the ONS Coronavirus Infection Survey (2020) (96)
High incidence of malaria in alpha-thalassaemic children. (1996) (95)
Reduction of invasive pneumococcal disease 3 years after the introduction of the 13-valent conjugate vaccine in the Oxfordshire region of England. (2014) (94)
Trends over time in Escherichia coli bloodstream infections, urinary tract infections, and antibiotic susceptibilities in Oxfordshire, UK, 1998-2016: a study of electronic health records. (2018) (93)
UGT1A1 variation and gallstone formation in sickle cell disease. (2005) (93)
The impact of SARS-CoV-2 vaccination on Alpha and Delta variant transmission (2021) (92)
Maternal anti-D concentrations and outcome in rhesus haemolytic disease of the newborn. (1982) (91)
Antibody responses and correlates of protection in the general population after two doses of the ChAdOx1 or BNT162b2 vaccines (2022) (91)
Safety of recombinant fowlpox strain FP9 and modified vaccinia virus Ankara vaccines against liver-stage P. falciparum malaria in non-immune volunteers. (2006) (90)
Extended Sequence Typing of Campylobacter spp., United Kingdom (2008) (89)
Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices (2018) (88)
Increasing burden of community-acquired pneumonia leading to hospitalisation, 1998–2014 (2016) (86)
Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing. (2013) (85)
Evaluation of atovaquone in the treatment of patients with uncomplicated Plasmodium falciparum malaria. (1995) (84)
Detection of Mixed Infection from Bacterial Whole Genome Sequence Data Allows Assessment of Its Role in Clostridium difficile Transmission (2013) (83)
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infectivity by Viral Load, S Gene Variants and Demographic Factors, and the Utility of Lateral Flow Devices to Prevent Transmission (2021) (82)
Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data (2017) (81)
Mycobacterial DNA Extraction for Whole-Genome Sequencing from Early Positive Liquid (MGIT) Cultures (2015) (81)
DNA Sequencing Predicts 1st-Line Tuberculosis Drug Susceptibility Profiles (2018) (76)
Plasmodium vivax: a cause of malnutrition in young children. (1997) (76)
Extensive Within-Host Diversity in Fecally Carried Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli Isolates: Implications for Transmission Analyses (2015) (72)
Genomic diversity affects the accuracy of bacterial single-nucleotide polymorphism–calling pipelines (2020) (71)
Contact investigations for outbreaks of Mycobacterium tuberculosis: advances through whole genome sequencing. (2013) (70)
Systemic mycosis due to Penicillium marneffei in a patient with antibody to human immunodeficiency virus. (1988) (70)
Acquisition of Streptococcus pneumoniae and Nonspecific Morbidity in Infants and Their Families: A Cohort Study (2005) (70)
Severe infections emerge from commensal bacteria by adaptive evolution (2017) (69)
Anti-spike antibody response to natural SARS-CoV-2 infection in the general population (2021) (69)
Bacteraemia prediction in emergency medical admissions: role of C reactive protein (2005) (69)
Covert dissemination of carbapenemase-producing Klebsiella pneumoniae (KPC) in a successfully controlled outbreak: long- and short-read whole-genome sequencing demonstrate multiple genetic modes of transmission (2017) (69)
Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe (2019) (69)
Epidemiology of Clostridium difficile in infants in Oxfordshire, UK: Risk factors for colonization and carriage, and genetic overlap with regional C. difficile infection strains (2017) (68)
Comparison of Multilocus Variable-Number Tandem-Repeat Analysis and Whole-Genome Sequencing for Investigation of Clostridium difficile Transmission (2013) (67)
Evaluation of Whole-Genome Sequencing for Mycobacterial Species Identification and Drug Susceptibility Testing in a Clinical Setting: a Large-Scale Prospective Assessment of Performance against Line Probe Assays and Phenotyping (2017) (65)
Decline of meticillin-resistant Staphylococcus aureus in Oxfordshire hospitals is strain-specific and preceded infection-control intensification (2011) (64)
Population structure of group B streptococcus from a low-incidence region for invasive neonatal disease. (2005) (64)
Multiple origins of the sickle mutation: evidence from beta S globin gene cluster polymorphisms. (1983) (64)
Routine versus clinically driven laboratory monitoring of HIV antiretroviral therapy in Africa (DART): a randomised non-inferiority trial. (2010) (64)
Antiretroviral therapy alone versus antiretroviral therapy with a kick and kill approach, on measures of the HIV reservoir in participants with recent HIV infection (the RIVER trial): a phase 2, randomised trial (2020) (64)
Quantitative SARS-CoV-2 anti-spike responses to Pfizer–BioNTech and Oxford–AstraZeneca vaccines by previous infection status (2021) (63)
MRSA bacteraemia in patients on arrival in hospital: a cohort study in Oxfordshire 1997-2003 (2005) (63)
Emergence and spread of predominantly community-onset Clostridium difficile PCR ribotype 244 infection in Australia, 2010 to 2012. (2015) (63)
Increased infections, but not viral burden, with a new SARS-CoV-2 variant (2021) (63)
The evolution of genetic structure in the marine pathogen, Vibrio vulnificus. (2007) (63)
Clostridium difficile Mixed Infection and Reinfection (2011) (61)
Safe intravenous antibiotic therapy at home: experience of a UK based programme. (1996) (61)
Whole-Genome Sequencing Demonstrates That Fidaxomicin Is Superior to Vancomycin for Preventing Reinfection and Relapse of Infection With Clostridium difficile (2013) (60)
A Modified RNA-Seq Approach for Whole Genome Sequencing of RNA Viruses from Faecal and Blood Samples (2013) (60)
Antibodies to SARS-CoV-2 are associated with protection against reinfection (2020) (60)
Nucleoside reverse-transcriptase inhibitor cross-resistance and outcomes from second-line antiretroviral therapy in the public health approach: an observational analysis within the randomised, open-label, EARNEST trial (2017) (60)
Rapid triage for COVID-19 using routine clinical data for patients attending hospital: development and prospective validation of an artificial intelligence screening test (2020) (59)
Adverse Effects of Antimalarials (1993) (59)
Whole genome sequencing for M/XDR tuberculosis surveillance and for resistance testing. (2017) (58)
Regular Review: Iron and infection (1988) (57)
SARS-CoV-2 RNA detected in blood products from patients with COVID-19 is not associated with infectious virus (2020) (56)
Impact of vaccination on SARS-CoV-2 cases in the community: a population-based study using the UK COVID-19 Infection Survey (2021) (56)
Dynamics of MDR Enterobacter cloacae outbreaks in a neonatal unit in Nepal: insights using wider sampling frames and next-generation sequencing (2015) (56)
Quantitative SARS-CoV-2 anti-spike responses to Pfizer-BioNTech and Oxford-AstraZeneca vaccines by previous infection status (2021) (54)
Daily testing for contacts of individuals with SARS-CoV-2 infection and attendance and SARS-CoV-2 transmission in English secondary schools and colleges: an open-label, cluster-randomised trial (2021) (54)
Direct measurement of the male recombination fraction in the human beta-globin hot spot. (2002) (54)
An observational cohort study on the incidence of SARS-CoV-2 infection and B.1.1.7 variant infection in healthcare workers by antibody and vaccination status (2021) (54)
COVID-19: Rapid Antigen detection for SARS-CoV-2 by lateral flow assay: a national systematic evaluation for mass-testing (2021) (53)
Interaction of malaria with a common form of severe thalassemia in an Asian population (2009) (53)
A Quantitative Evaluation of MIRU-VNTR Typing Against Whole-Genome Sequencing for Identifying Mycobacterium tuberculosis Transmission: A Prospective Observational Cohort Study (2018) (52)
Age-related changes in adaptation to severe anemia in childhood in developing countries (2007) (52)
Application of machine learning techniques to tuberculosis drug resistance analysis (2018) (52)
Ordering the mob: Insights into replicon and MOB typing schemes from analysis of a curated dataset of publicly available plasmids (2017) (52)
Validating a 14-Drug Microtiter Plate Containing Bedaquiline and Delamanid for Large-Scale Research Susceptibility Testing of Mycobacterium tuberculosis (2018) (52)
The antimalarial effect of iron chelators: studies in animal models and in humans with mild falciparum malaria. (1992) (51)
Two Distinct Patterns of Clostridium difficile Diversity Across Europe Indicating Contrasting Routes of Spread (2018) (51)
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples (2019) (50)
A Role for Tetracycline Selection in Recent Evolution of Agriculture-Associated Clostridium difficile PCR Ribotype 078 (2019) (50)
Increasing incidence of Escherichia coli bacteraemia is driven by an increase in antibiotic-resistant isolates: electronic database study in Oxfordshire 1999-2011. (2012) (50)
Tuberculosis is changing. (2017) (49)
Epidemiological studies of large resistance plasmids in Haemophilus. (2000) (49)
OMICRON-ASSOCIATED CHANGES IN SARS-COV-2 SYMPTOMS IN THE UNITED KINGDOM (2022) (48)
Absence of malaria-specific mortality in children in an area of hyperendemic malaria. (1997) (48)
Ct threshold values, a proxy for viral load in community SARS-CoV-2 cases, demonstrate wide variation across populations and over time (2020) (47)
Detection of Viral Pathogens With Multiplex Nanopore MinION Sequencing: Be Careful With Cross-Talk (2018) (47)
Stage-dependent effect of deferoxamine on growth of Plasmodium falciparum in vitro. (1990) (47)
Accuracy of Different Bioinformatics Methods in Detecting Antibiotic Resistance and Virulence Factors from Staphylococcus aureus Whole-Genome Sequences (2018) (47)
SARS-CoV-2 RNA detected in blood products from patients with COVID-19 is not associated with infectious virus. (2020) (47)
Dynamics of acquisition and loss of carriage of Staphylococcus aureus strains in the community: The effect of clonal complex☆☆☆ (2014) (46)
Multiple-Strain Colonization in Nasal Carriers of Staphylococcus aureus (2014) (46)
The prevalence of age-related maculopathy (ARM) in an urban Norwegian population: the Oslo Macular study. (2003) (46)
Epidemiological data and genome sequencing reveals that nosocomial transmission of SARS-CoV-2 is underestimated and mostly mediated by a small number of highly infectious individuals (2021) (44)
High Rate of HIV Resuppression After Viral Failure on First-line Antiretroviral Therapy in the Absence of Switch to Second-line Therapy (2013) (44)
Large scale screening for haemoglobin disorders in southern Vietnam: implications for avoidance and management (2010) (43)
An Observational Cohort Study on the Incidence of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection and B.1.1.7 Variant Infection in Healthcare Workers by Antibody and Vaccination Status (2021) (43)
SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex (2019) (42)
Contribution to Clostridium Difficile Transmission of Symptomatic Patients With Toxigenic Strains Who Are Fecal Toxin Negative (2017) (41)
Reduced soluble transferrin receptor concentrations in acute malaria in Vanuatu. (1999) (41)
Chromosomal Integration of the Klebsiella pneumoniae Carbapenemase Gene, blaKPC, in Klebsiella Species Is Elusive but Not Rare (2016) (41)
Shared SARS-CoV-2 diversity suggests localised transmission of minority variants (2020) (41)
Invasive pneumococcal disease: epidemiology in children and adults prior to implementation of the conjugate vaccine in the Oxfordshire region, England. (2008) (40)
Reduction in invasive pneumococcal disease following implementation of the conjugate vaccine in the Oxfordshire region, England. (2011) (39)
Testing for HIV: concise guidance. (2009) (38)
An efficient record linkage scheme using graphical analysis for identifier error detection (2011) (38)
Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies (2021) (37)
Diagnosis of SARS-CoV-2 Infection with LamPORE, a High-Throughput Platform Combining Loop-Mediated Isothermal Amplification and Nanopore Sequencing (2020) (37)
Molecular Epidemiology of Clostridium difficile Strains in Children Compared with That of Strains Circulating in Adults with Clostridium difficile-Associated Infection (2011) (37)
Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England (2013) (37)
SARS-CoV-2 RNA detected in blood samples from patients with COVID-19 is not associated with infectious virus (2020) (36)
Impact of waterborne outbreak of cryptosporidiosis on AIDS and renal transplant patients (1990) (35)
Healthcare-associated outbreak of meticillin-resistant Staphylococcus aureus bacteraemia: role of a cryptic variant of an epidemic clone (2014) (35)
The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis (2022) (34)
Analysis of the human a-globin gene cluster reveals a highly informative genetic locus ( haplotype / genetic linkage / recombinatlon / polymorphism ) (34)
The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis (2022) (34)
Adaptation to anemia in hemoglobin E-ß thalassemia. (2010) (33)
Comparison of Control of Clostridium difficile Infection in Six English Hospitals Using Whole-Genome Sequencing (2017) (32)
A curated dataset of complete Enterobacteriaceae plasmids compiled from the NCBI nucleotide database (2017) (32)
Whole-Genome Sequencing for Predicting Clarithromycin Resistance in Mycobacterium abscessus (2018) (32)
Machine learning for the prediction of antibacterial susceptibility in Mycobacterium tuberculosis (2014) (31)
Niche and local geography shape the pangenome of wastewater- and livestock-associated Enterobacteriaceae (2020) (31)
Lopinavir plus nucleoside reverse-transcriptase inhibitors, lopinavir plus raltegravir, or lopinavir monotherapy for second-line treatment of HIV (EARNEST): 144-week follow-up results from a randomised controlled trial (2018) (30)
Artificial intelligence driven assessment of routinely collected healthcare data is an effective screening test for COVID-19 in patients presenting to hospital (2020) (30)
Reducing demand for antibiotic prescriptions: evidence from an online survey of the general public on the interaction between preferences, beliefs and information, United Kingdom, 2015 (2018) (30)
The impact of SARS-CoV-2 vaccines on antibody responses in the general population in the United Kingdom (2021) (30)
Positive replication and linkage disequilibrium mapping of the chromosome 21q22.1 malaria susceptibility locus (2007) (30)
The relative importance of large problems far away versus small problems closer to home: insights into limiting the spread of antimicrobial resistance in England (2017) (29)
Rapid antibiotic resistance predictions from genome sequence data for S. aureus and M. tuberculosis (2015) (29)
Thalassemia in Sri Lanka: a progress report. (2004) (28)
Robust Prediction of Resistance to Trimethoprim in Staphylococcus aureus. (2018) (27)
QINGHAOSU, MEFLOQUINE, AND PYRIMETHAMINE-SULFADOXINE IN FALCIPARUM MALARIA (1985) (27)
Tracking the Emergence of SARS-CoV-2 Alpha Variant in the United Kingdom (2021) (27)
Causes and Timing of Mortality and Morbidity Among Late Presenters Starting Antiretroviral Therapy in the REALITY Trial (2018) (27)
Some Synonymous and Nonsynonymous gyrA Mutations in Mycobacterium tuberculosis Lead to Systematic False-Positive Fluoroquinolone Resistance Results with the Hain GenoType MTBDRsl Assays (2017) (27)
Viral load in community SARS-CoV-2 cases varies widely and temporally (2020) (27)
Differential occupational risks to healthcare workers from SARS-CoV-2: A prospective observational study (2020) (26)
The evolutionary and clinical implications of the uneven distribution of the frequency of the inherited haemoglobin variants over short geographical distances (2017) (25)
Are There Better Methods of Monitoring MRSA Control than Bacteraemia Surveillance? An Observational Database Study (2008) (25)
Randomised controlled trial of oxygen therapy and high-flow nasal therapy in African children with pneumonia (2021) (25)
Investigation of the impact of the NICE guidelines regarding antibiotic prophylaxis during invasive dental procedures on the incidence of infective endocarditis in England: an electronic health records study (2020) (25)
Illumina short-read and MinION long-read WGS to characterize the molecular epidemiology of an NDM-1 Serratia marcescens outbreak in Romania (2017) (24)
Clostridium difficile trehalose metabolism variants are common and not associated with adverse patient outcomes when variably present in the same lineage (2019) (24)
Late Presentation With HIV in Africa: Phenotypes, Risk, and Risk Stratification in the REALITY Trial (2018) (24)
Genomic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients (2020) (24)
Decreased tryptophan availability but normal post-synaptic 5-HT2c receptor sensitivity in chronic fatigue syndrome (2001) (24)
Reconciling the Potentially Irreconcilable? Genotypic and Phenotypic Amoxicillin-Clavulanate Resistance in Escherichia coli (2019) (24)
An eight year experience of conservative management for aortic graft sepsis. (1994) (23)
Patient and Strain Characteristics Associated With Clostridium difficile Transmission and Adverse Outcomes (2018) (23)
Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation (2017) (23)
Multi-site and nasal swabbing for carriage of Staphylococcus aureus: what does a single nose swab predict? (2017) (23)
Hospital exposure in a UK population, and its association with bacteraemia. (2007) (23)
Can rapid integrated polymerase chain reaction-based diagnostics for gastrointestinal pathogens improve routine hospital infection control practice? A diagnostic study. (2014) (22)
Identification of host–pathogen-disease relationships using a scalable multiplex serology platform in UK Biobank (2019) (21)
DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis (2019) (21)
Stringent thresholds in SARS-CoV-2 IgG assays lead to under-detection of mild infections (2021) (21)
Reducing expectations for antibiotics in primary care: a randomised experiment to test the response to fear-based messages about antimicrobial resistance (2020) (20)
A Study of Three Cases of Familial Related Agenesis of the Corpus Callosum (2000) (20)
‘Caveat emptor’: the cautionary tale of endocarditis and the potential pitfalls of clinical coding data—an electronic health records study (2019) (20)
Invasive pneumococcal disease in Oxford, 1985–2001: a retrospective case series (2003) (20)
Statistical methodology in the analysis of relationships between DNA polymorphisms and disease: putative association of Ha-ras-I hypervariable alleles and cancer. (1988) (20)
Genomic dynamics of species and mobile genetic elements in a prolonged blaIMP-4-associated carbapenemase outbreak in an Australian hospital (2020) (20)
DNA extraction from primary liquid blood cultures for bloodstream infection diagnosis using whole genome sequencing (2018) (19)
Prevalence of MRSA in emergency and elective patients admitted to a vascular surgical unit: implications for antibiotic prophylaxis. (2006) (19)
Ten-year longitudinal molecular epidemiology study of Escherichia coli and Klebsiella species bloodstream infections in Oxfordshire, UK (2021) (19)
Within-host genomics of SARS-CoV-2 (2020) (19)
GenomegaMap: Within-Species Genome-Wide dN/dS Estimation from over 10,000 Genomes (2019) (19)
Intervention planning for Antibiotic Review Kit (ARK): a digital and behavioural intervention to safely review and reduce antibiotic prescriptions in acute and general medicine (2019) (19)
Is MRSA admission bacteraemia community-acquired? A case control study. (2008) (18)
Genomic network analysis of environmental and livestock F-type plasmid populations (2021) (17)
Revisiting the Design of Phase III Clinical Trials of Antimalarial Drugs for Uncomplicated Plasmodium falciparum Malaria (2008) (17)
Short-Term Genome Stability of Serial Clostridium difficile Ribotype 027 Isolates in an Experimental Gut Model and Recurrent Human Disease (2013) (17)
The 'just-in-case venflon': effect of surveillance and feedback on prevalence of peripherally inserted intravascular devices. (2006) (17)
Risk factors for Klebsiella pneumoniae carbapenemase (KPC) gene acquisition and clinical outcomes across multiple bacterial species (2020) (17)
Surrogate markers in HIV disease. (1996) (17)
Iron metabolism in murine erythroleukaemic cells (1983) (17)
Genomic network analysis of environmental and livestock F-type plasmid populations (2021) (17)
Identifying Mixed Mycobacterium tuberculosis Infection and Laboratory Cross-Contamination during Mycobacterial Sequencing Programs (2018) (16)
A data compendium associating the genomes of 12,289 Mycobacterium tuberculosis isolates with quantitative resistance phenotypes to 13 antibiotics (2022) (16)
Diversity of antibiotic resistance integrative and conjugative elements among haemophili. (2007) (16)
Genomic Epidemiology of Complex, Multispecies, Plasmid-Borne blaKPC Carbapenemase in Enterobacterales in the United Kingdom from 2009 to 2014 (2020) (16)
Complete Genome Sequence of KPC-Producing Klebsiella pneumoniae Strain CAV1193 (2016) (16)
Genomic diversity affects the accuracy of bacterial SNP calling pipelines (2019) (15)
The Spatial Morphology of Intraluminal Thrombus Influences Type II Endoleak after Endovascular Repair of Abdominal Aortic Aneurysms (2020) (15)
Cognitive behaviour therapy for the chronic fatigue syndrome. (1996) (15)
Investigation of prevalence of MRS A in referrals to neurosurgery: implications for antibiotic prophylaxis (2002) (15)
Automated detection of bacterial growth on 96-well plates for high-throughput drug susceptibility testing of Mycobacterium tuberculosis. (2018) (15)
British HIV Association/British Association for Sexual Health and HIV/British Infection Association adult HIV testing guidelines 2020 (2020) (14)
BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness (2017) (14)
Surveillance of Infection Severity: A Registry Study of Laboratory Diagnosed Clostridium difficile (2012) (14)
Multi-Label Random Forest Model for Tuberculosis Drug Resistance Classification and Mutation Ranking (2020) (14)
Ten Years of Population-Level Genomic Escherichia coli and Klebsiella pneumoniae Serotype Surveillance Informs Vaccine Development for Invasive Infections (2020) (14)
A genomic epidemiological study shows that prevalence of antimicrobial resistance in Enterobacterales is associated with the livestock host, as well as antimicrobial usage (2021) (14)
Stringent thresholds for SARS-CoV-2 IgG assays result in under-detection of cases reporting loss of taste/smell (2020) (14)
Hash-Based Core Genome Multilocus Sequence Typing for Clostridium difficile (2019) (13)
Immediate versus deferred zidovudine (AZT) in asymptomatic or mildly symptomatic HIV infected adults. (2000) (13)
Antimicrobial resistance determinants are associated with Staphylococcus aureus bacteraemia and adaptation to the healthcare environment: a bacterial genome-wide association study (2021) (13)
Prediction of pyrazinamide resistance in Mycobacterium tuberculosis using structure-based machine learning approaches (2019) (13)
Zidovudine (AZT) versus AZT plus didanosine (ddI) versus AZT plus zalcitabine (ddC) in HIV infected adults. (2000) (13)
Epidemiology of Mycobacterium abscessus in England: an observational study (2021) (13)
Hemoglobin E‐β‐Thalassemia: Progress Report from the International Study Group (2005) (13)
Adaptation and implementation of the ARK (Antibiotic Review Kit) Intervention to safely and substantially reduce antibiotic use in hospitals: A feasibility study. (2019) (13)
Nested Russian Doll-like Genetic Mobility Drives (2015) (13)
Regarding "Clostridium difficile ribotype does not predict severe infection". (2013) (12)
Absence of Atypical Pathogens in Pleural Infection. (2015) (12)
Impact of vaccination on new SARS-CoV-2 infections in the UK (2021) (12)
Nanopore metagenomic sequencing to investigate nosocomial transmission of human metapneumovirus from a unique genetic group among haematology patients in the United Kingdom. (2020) (12)
Analysis ofthehumana-globin genecluster reveals ahighly informative genetic locus (1986) (12)
Optimized use of Oxford Nanopore flowcells for hybrid assemblies (2020) (12)
Control of Artifactual Variation in Reported Intersample Relatedness during Clinical Use of a Mycobacterium tuberculosis Sequencing Pipeline (2018) (11)
Nanopore metagenomic sequencing of influenza virus directly from respiratory samples: diagnosis, drug resistance and nosocomial transmission, United Kingdom, 2018/19 influenza season (2020) (11)
‘Feral’ and ‘wild’-type methicillin-resistant Staphylococcus aureus in the United Kingdom (2009) (11)
DNA Thermo-Protection Facilitates Whole-Genome Sequencing of Mycobacteria Direct from Clinical Samples (2020) (11)
A cluster randomised trial of the impact of a policy of daily testing for contacts of COVID-19 cases on attendance and COVID-19 transmission in English secondary schools and colleges (2021) (11)
SARS-CoV-2 antibody prevalence, titres and neutralising activity in an antenatal cohort, United Kingdom, 14 April to 15 June 2020 (2020) (11)
Fairness of financial penalties to improve control of Clostridium difficile (2008) (11)
Corticofugal actions on the lateral cervical nucleus of the cat (1980) (10)
Long‐term follow‐up of randomized trials of immediate versus deferred zidovudine in symptom‐free HIV infection (1998) (10)
Molecular diagnosis of orthopaedic device infection direct from sonication fluid by metagenomic sequencing (2017) (10)
Route and Duration of antibiotic therapy in acute cellulitis: A systematic review and meta-analysis of the effectiveness and harms of antibiotic treatment. (2020) (10)
Symptoms and SARS-CoV-2 positivity in the general population in the UK (2021) (10)
Hemoglobin E-beta-thalassemia: Progress report from the International Study Group. (2005) (9)
UGT 1 A 1 variation and gallstone formation in sickle cell disease (2005) (9)
Evaluation of methods for detecting human reads in microbial sequencing datasets (2020) (9)
Case of cryptic malaria. (2004) (9)
Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis (2016) (9)
Ahaptoglobinaemia in Melanesia: DNA and malarial antibody studies. (1987) (9)
When enough is enough: how the decision was made to stop the FEAST trial: data and safety monitoring in an African trial of Fluid Expansion As Supportive Therapy (FEAST) for critically ill children (2013) (8)
Metalware-associated orthopaedic infections caused by Staphylococcus lugdunensis: An emerging pathogen (2017) (8)
A data compendium of Mycobacterium tuberculosis antibiotic resistance (2021) (8)
Predictors of recurrence, early treatment failure and death from Staphylococcus aureus bacteraemia: observational analyses within the ARREST trial. (2019) (8)
Antibiotic use and clinical outcomes in the acute setting under management by an infectious diseases acute physician versus other clinical teams: a cohort study (2016) (8)
Preferences for Medical Consultations from Online Providers: Evidence from a Discrete Choice Experiment in the United Kingdom (2021) (7)
Toxicity of antimalarial drugs. (1989) (7)
Evolution of Protease Inhibitor Resistance in Human Immunodeficiency Virus Type 1 Infected Patients Failing Protease Inhibitor Monotherapy as Second-line Therapy in Low-income Countries: An Observational Analysis Within the EARNEST Randomized Trial (2018) (7)
Genome-wide association studies of global Mycobacterium tuberculosis resistance to 13 antimicrobials in 10,228 genomes identify new resistance mechanisms (2022) (7)
Antibiotic Review Kit for Hospitals (ARK-Hospital): study protocol for a stepped-wedge cluster-randomised controlled trial (2019) (7)
A randomized trial comparing regimens of four reverse transcriptase inhibitors given together or cyclically in HIV-1 infection - The Quattro Trial (1999) (7)
A role for tetracycline selection in the evolution of Clostridium difficile PCR-ribotype 078 (2018) (7)
Adaptation to anemia in hemoglobin E-β thalassemia (Blood (2010) 116, 24 (5368-5370)) (2011) (7)
Why do hospital prescribers continue antibiotics when it is safe to stop? Results of a choice experiment survey (2020) (7)
Risk factors for Clostridium difficile acquisition in infants: importance of study design. (2013) (7)
Whole genome sequencing for predicting Mycobacterium abscessus drug susceptibility (2018) (6)
HLA GENES AND LONGEVITY (1987) (6)
Human and Porcine Transmission of Clostridioides difficile Ribotype 078, Europe (2021) (6)
Real-time analysis of nanopore-based metagenomic sequencing from orthopaedic device infection (2017) (6)
Improved Performance Predicting Clarithromycin Resistance in Mycobacterium abscessus on an Independent Data Set (2019) (6)
Meta-analysis and systematic review of antibiotic trials. (1999) (5)
The mobilome associated with Gram-negative bloodstream infections: A large-scale observational hybrid sequencing based study (2022) (5)
Author response: Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study (2020) (5)
Molecular epidemiology of Escherichia coli and Klebsiella species bloodstream infections in Oxfordshire (UK) 2008-2018 (2021) (5)
MinION Nanopore Sequencing of Multiple Displacement Amplified Mycobacteria DNA Direct from Sputum (2018) (5)
Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission (2022) (5)
HIV-1-specific CD8 T cell responses in a pediatric slow progressor infected as a premature neonate. (2002) (5)
SARS-CoV-2 anti-spike IgG antibody responses after second dose of ChAdOx1 or BNT162b2 in the UK general population (2021) (5)
Immediate versus deferred zidovudine (AZT) in asymptomatic or mildly symptomatic HIV infected adults. (2000) (5)
Selective culture enrichment and sequencing of feces to enhance detection of antimicrobial resistance genes in third-generation cephalosporin resistant Enterobacteriaceae (2019) (5)
Incidence and predictors of hospital readmission in children presenting with severe anaemia in Uganda and Malawi: a secondary analysis of TRACT trial data (2021) (4)
Correlates of protection against SARS-CoV-2 Omicron variant and anti-spike antibody responses after a third/booster vaccination or breakthrough infection in the UK general population (2022) (4)
BashTheBug: a crowd of volunteers reproducibly and accurately measure the minimum inhibitory concentrations of 13 antitubercular drugs from photographs of 96-well broth microdilution plates (2021) (4)
Mycobacterium tuberculosis transmission in Birmingham, UK, 2009–19: An observational study (2022) (4)
Using linked electronic health records to report healthcare-associated infections (2018) (4)
Automated detection of Mycobacterial growth on 96-well plates for rapid and accurate Tuberculosis drug susceptibility testing (2017) (4)
Severe infections emerge from the microbiome by adaptive evolution (2017) (4)
Prolonged CD8+ T-cell expansions after adoptive transfer of syngeneic lymphocytes between HIV-discordant identical twins. (1998) (4)
Nanopore sequencing for Mycobacterium tuberculosis drug susceptibility testing and outbreak investigation (2022) (4)
Impact of hospital antibiotic use on patient-level risk of death among 36,124,372 acute and medical admissions in England. (2021) (4)
The 2021 WHO Catalogue of Mycobacterium Tuberculosis Complex Mutations Associated with Drug Resistance: A New Global Standard for Molecular Diagnostics (2021) (4)
Metrics for Public Health Perspective Surveillance of Bacterial Antibiotic Resistance in Low- and Middle-Income Countries (2020) (3)
Flanker: a tool for comparative genomics of gene flanking regions (2021) (3)
WGS to determine the extent of Clostridioides difficile transmission in a high incidence setting in North Wales in 2015 (2018) (3)
Evaluation of Nanopore sequencing for Mycobacterium tuberculosis drug susceptibility testing and outbreak investigation: a genomic analysis (2022) (3)
Rapid turnaround multiplex sequencing of SARS-CoV-2: comparing tiling amplicon protocol performance (2022) (3)
Monitoring populations at increased risk for SARS-CoV-2 infection in the community (2021) (3)
Trends in Escherichia coli bloodstream infection, urinary tract infections and antibiotic susceptibilities in Oxfordshire, 1998-2016: an observational study (2017) (3)
Modelling the effectiveness and social costs of daily lateral flow antigen tests versus quarantine in preventing onward transmission of COVID-19 from traced contacts (2021) (3)
Omicron-Associated Changes in Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Symptoms in the United Kingdom (2022) (3)
Adaptation to anemia in hemoglobin E-beta thalassemia (vol 116, pg 5368, 2011) (2011) (3)
Allele-specific DNA identity patterns (1987) (3)
DOXYCYCLINE PROPHYLAXIS IN MALARIA (1987) (3)
Risk Factors Associated with Carbapenemase-Producing Enterobacterales (CPE) Positivity in the Hospital Wastewater Environment (2020) (3)
Post-tropical screening. Is of little value... (1993) (3)
A crowd of BashTheBug volunteers reproducibly and accurately measure the minimum inhibitory concentrations of 13 antitubercular drugs from photographs of 96-well broth microdilution plates (2022) (3)
Anti-spike antibody response to natural SARS-CoV-2 infection in the general population (2021) (3)
Erratum: Artesunate versus quinine in the treatment of severe falciparum malaria in African children (AQUAMAT): an open-label, randomised trial (The Lancet (2010) 376(9753) (1647–1657) (S0140673610619241) (10.1016/S0140-6736(10)61924-1)) (2011) (3)
Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction (2022) (3)
10 Iron and infection (1989) (3)
Transmission of Staphylococcus aureus between healthcare workers, the environment and patients in an intensive care unit: a whole-genome sequencing based longitudinal cohort study (2017) (2)
Scalable Pathogen Pipeline Platform (SP^3): Enabling Unified Genomic Data Analysis with Elastic Cloud Computing (2019) (2)
An Open-Source Azure Solution for Scalable Genomics Workflows (2018) (2)
EFFECTS OF IRON AND DESFERRIOXAMINE ON THE GROWTH OF PLASMODIUM FALCIPARUM IN VITRO (1987) (2)
High fluoroquinolone resistance proportions among multidrug-resistant tuberculosis driven by dominant L2 Mycobacterium tuberculosis clones in the Mumbai Metropolitan Region (2022) (2)
Using hospital network-based surveillance for antimicrobial resistance as a more robust alternative to self-reporting (2019) (2)
Mortality risks associated with empirical antibiotic activity in Escherichia coli bacteraemia: an analysis of electronic health records (2022) (2)
Awareness of Appropriate Antibiotic Use in Primary Care for Influenza-Like Illness: Evidence of Improvement from UK Population-Based Surveys (2020) (2)
Genomic epidemiology of a complex, multi-species plasmid-borne blaKPC carbapenemase outbreak in Enterobacterales in the UK, 2009-2014 (2019) (2)
Antimicrobial resistance genes and clonal success in Escherichia coli isolates causing bloodstream infection. (2021) (2)
Hospital and community transmission of Clostridium difficile: a whole genome sequencing study (2012) (2)
Symptoms and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Positivity in the General Population in the United Kingdom (2021) (2)
Symptoms and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Positivity in the General Population in the United Kingdom (2021) (2)
Comparison of Staphylococcus aureus Acquisition and Transmission Rates in 3 Wards Using spa Typing (2012) (2)
Patient engagement with antibiotic messaging in secondary care: a qualitative feasibility study of the ‘review and revise’ experience (2020) (2)
Enhancing epidemiological investigation of nosocomial SARS-CoV-2 infection with whole genome sequencing: A retrospective cohort study across four hospitals in the UK. (2021) (2)
Validation of a 14-drug microtitre plate that includes delamanid and bedaquiline for susceptibility testing of M. tuberculosis (2018) (2)
Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: An exploratory study across Cambodia, Kenya, and the UK (2021) (2)
Zidovudine (AZT) versus AZT plus didanosine (ddI) versus AZT plus zalcitabine (ddC) in HIV infected adults. (2000) (2)
Whole blood versus red cell concentrates for children with severe anaemia: a secondary analysis of the Transfusion and Treatment of African Children (TRACT) trial (2022) (2)
Mycobacterium abscessus Genomic Clusters Span Geography and Patient Groups (2021) (2)
A critical analysis of recent data on zidovudine therapy: use in asymptomatic HIV infection and early HIV disease, dosing and resistance issues. (1990) (2)
Selective culture enrichment and sequencing of faeces to enhance detection of antimicrobial resistance genes (2019) (2)
A novel multi SNP based method for the identification of subspecies and associated lineages and sub-lineages of the Mycobacterium tuberculosis complex by whole genome sequencing (2017) (2)
Nanopore metagenomic sequencing of full length human metapneumovirus (HMPV) within a unique sub-lineage (2018) (2)
Infectious disease training: challenges and opportunities. (2002) (2)
Discordance between different bioinformatic methods for identifying resistance genes from short-read genomic data, with a focus on Escherichia coli (2021) (1)
Genomic network analysis of an environmental and livestock IncF plasmid population (2020) (1)
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission (2012) (1)
Cognitive behaviour therapy for the chronic fatigue syndrome - Reply (1996) (1)
Clostridium difficile in England: can we stop washing our hands? - Authors' reply. (2017) (1)
Daily contact testing schools and colleges trial (2021) (1)
Molecular epidemiology and antimicrobial resistance phenotype of paediatric bloodstream infections caused by Gram-negative bacteria (2022) (1)
Mycobacterium Tuberculosis Transmission in Birmingham, UK, 2009-19: A Prospective Observational Study (2021) (1)
An ecological comparison of hospital-level antibiotic use and mortality in 36,124,372 acute/general medicine inpatients in England (2020) (1)
Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England (2013) (1)
A whole-genome sequencing approach to targeting Mycobacterium tuberculosis outbreak management (2012) (1)
HIV Infection, the Brain and Behaviour: Major Psychiatric Disorder without Cognitive Impairment before or after the Episode (1992) (1)
Author response: Severe infections emerge from commensal bacteria by adaptive evolution (2017) (1)
An end-to-end heterogeneous graph attention network for Mycobacterium tuberculosis drug-resistance prediction (2021) (1)
Feasibility of a complex behaviour change intervention insecondary care to safely and substantially reduce antibioticuse (2017) (1)
Performance of antigen lateral flow devices in the UK during the alpha, delta, and omicron waves of the SARS-CoV-2 pandemic: a diagnostic and observational study (2023) (1)
Letter to the editor in response to a letter by Deeks regarding Peto T; UK COVID-19 lateral flow oversight team: COVID-19: Rapid antigen detection for SARS-CoV-2 by lateral flow assay (2021) (1)
SARS-CoV-2 RNA detected in blood products from patients with COVID-19 is not associated with infectious virus [version 2; peer review: 1 approved] (2020) (1)
Intelligent Electronic Health Systems (2018) (1)
Combining Charlson and Elixhauser scores with varying lookback predicated mortality better than using individual scores. (2020) (1)
Improving patient flow during infectious disease outbreaks using machine learning for real-time prediction of patient readiness for discharge (2021) (1)
Reply to Walk et al. (2013) (1)
A Quantitative Evaluation ofMIRU-VNTR Typing AgainstWhole-Genome Sequencing for Identifying Mycobacterium tuberculosis Transmission: A Prospective Observational Cohort Study (2019) (1)
gene cluster revealed by large scale whole genome sequencing (2012) (1)
Iron plays a central role in a number of essential biochemical reactions . Since iron deprivation in microbial cultures is regularly associated with inhibition ofgrowth, (2003) (0)
Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: A study across three settings in Cambodia, Kenya, and the UK (2020) (0)
Corrigendum (2013) (0)
BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness (2017) (0)
Staphylococcus aureus in critical care - Authors' reply. (2017) (0)
When do big problems far away become smaller than the problems closer to home (2019) (0)
HIV/AIDS (2020) (0)
4 Intelligent Electronic Health Systems (2015) (0)
SARS-CoV-2 RNA detected in blood products from patients with COVID-19 is not associated with infectious virus. Wellcome Open Research, 5, [181]. (2021) (0)
Incoming HIV virion-derived Gag Spacer Peptide 2 (p1) is a target of effective CD8+ T cell antiviral responses. (2021) (0)
Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices (2018) (0)
SARS-CoV-2 antibody trajectories after a single COVID-19 vaccination with and without prior infection (2022) (0)
Author's response to reviews Title: An efficient record linkage scheme using graphical analysis for identifier error detection Authors: (2010) (0)
Corrigendum: Automated detection of bacterial growth on 96-well plates for high-throughput drug susceptibility testing of Mycobacterium tuberculosis. (2019) (0)
Whole-Genome Sequencing Demonstrates That Fidaxomicin Is Superior to Vancomycin for Preventing Reinfection and Relapse of Infection With Clostridium dif ﬁ cile (2014) (0)
(2017). Covert dissemination of carbapenemase-producing Klebsiella pneumoniae (KPC) in a successfully controlled outbreak: long- and short-read whole-genome sequencing demonstrate multiple genetic modes of transmission. Antimicrobial Chemotherapy (11), (2017) (0)
Mortality risks associated with empirical antibiotic activity in E. coli bacteraemia: an analysis of electronic health records (2022) (0)
University of Dundee A Role for Tetracycline Selection in Recent Evolution of Agriculture-Associated Clostridium difficile PCR Ribotype 078 Dingle, (2019) (0)
Running title : Multiple genetic levels of bla KPC mobility 3 (2015) (0)
MassCode characterisation and optimisation (2014) (0)
ViewBovine: A Microservices-Powered Web Application to Support Interactive Investigation of Bovine Tuberculosis Infection Pathways (2020) (0)
Mycobacterium bovis (BCG) infection in an immunocompromised child [version 1; peer review: awaiting peer review] (2020) (0)
METAGENOMIC SEQUENCING FOR ORTHOPAEDIC DEVICE-RELATED INFECTION (2017) (0)
SARS-CoV-2 evolution during treatment of chronic infection (2021) (0)
Antimicrobial resistance surveillance: can we estimate resistance in bloodstream infections from other types of specimen? (2020) (0)
Performance of antigen lateral flow devices in the United Kingdom during the Alpha, Delta, and Omicron waves of the SARS-CoV-2 pandemic (2022) (0)
Antimicrobial resistance in commensal opportunistic pathogens isolated from non-sterile sites can be an effective proxy for surveillance in bloodstream infections (2021) (0)
Risk Factors Associated with Carbapenemase-Producing <italic toggle='yes'>Enterobacterales</italic> (CPE) Positivity in the Hospital Wastewater Environment (2020) (0)
Therapeutic aspects of retroviral disease. (1992) (0)
The challenge of limited vaccine supplies: impact of prior infection on anti-spike IgG antibody trajectories after a single COVID-19 vaccination (2021) (0)
Mycobacterium bovis (BCG) infection in an immunocompromised child [version 1; peer review: 2 approved] (2020) (0)
Clinical decision-making (2020) (0)
Subject Section Application of machine learning techniques to tuberculosis drug resistance analysis (2018) (0)
The quality of vital signs measurements and value preferences in electronic medical records varies by hospital, specialty, and patient demographics (2023) (0)
Trends in Escherichia coli bloodstream infection, urinary tract infections and 1 antibiotic susceptibilities in Oxfordshire, 1998-2016: an observational electronic 2 (2018) (0)
Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis (2023) (0)
Exploring the extent of uncatalogued genetic variation in antimicrobial resistance gene families in Escherichia coli (2023) (0)
Authors' reply (1996) (0)
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples (2019) (0)
Decision making on the route and duration of antibiotic therapy in acute cellulitis: A systematic review and meta-analyses considering the effectiveness and harms of antibiotic treatment. Running title: Antibiotic treatment decision making for acute cellulitis (2020) (0)
Adult bacterial meningitis in Malawi: A randomised controlled trail of steroid adjuvant therapy and a comparison of intravenous and intramuscular ceftriaxone (2008) (0)
Report from the EUCAST Subcommittee on the Role of Whole Genome Sequencing ( WGS ) in Antimicrobial Susceptibility Testing of Bacteria . Version 1 , 2016 (2016) (0)
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples (2019) (0)
SARS-CoV-2 RNA detected in blood products from patients with COVID-19 is not associated with infectious virus [version 1; peer review: 1 approved with reservations] (2020) (0)
Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli (2017) (0)
Ten-year longitudinal molecular epidemiology study of Escherichia coli and Klebsiella species bloodstream infections in Oxfordshire, UK (2021) (0)
Assessment of an institutional guideline for vancomycin dosing and identification of predictive factors associated with dose and drug trough levels. (2022) (0)
Assessment of a vancomycin dosing guideline and identification of predictive factors associated with dose and drug trough levels (2022) (0)
SARS-CoV-2 genomics beyond the consensus sequence: evidence for circulating mixed viral populations (2020) (0)
Training in general (internal) medicine alone. (2001) (0)
Author response: Ct threshold values, a proxy for viral load in community SARS-CoV-2 cases, demonstrate wide variation across populations and over time (2021) (0)
Transfusion associated graft versus host disease (1999) (0)
Severity of illness and the weekend effect – Authors' reply (2017) (0)
Patient engagement with antibiotic messaging in secondary care: a qualitative feasibility study of the & revise’ experience. (2020) (0)
Molecular epidemiology of paediatric bloodstream infections caused by Gram-negative bacteria in Oxfordshire, UK (2021) (0)
Phase 1 blinded investigation (2014) (0)
"Complete the antibiotic course to avoid resistance”; non-evidence-based dogma which has run its course? (2017) (0)
Metabolic Changes Due to HIV Infection in Human Brain in Vivo: A 31P Magnetic Resonance Spectroscopy Study (1991) (0)
The impact of number and frequency of nasal swabs on prevalence of persistent Staphylococcus aureus carriage (2012) (0)
Phenotypically distinct human sequence is widespread in publicly archived microbial reads: an evaluation of methods for its detection (2019) (0)
Laboratory manager questionnaire (2014) (0)
The efficacy of polysaccharide pneumococcal vaccine revisited: Meta-analysis of randomised trials and re-evaluation of the case-control studies (2000) (0)
Risk factors for meningitis or pneumonia in a cohort of children with invasive pneumococcal disease (2002) (0)
Carriers of Staphylococcus aureus Multiple-Strain Colonization in Nasal (2014) (0)
Detection of respiratory viruses by Nanopore Metagenomic sequencing (2018) (0)
Aids clinical trials (1997) (0)
Risk of WHO 4 events and death by current CD4 on ART in the DART trial: the impact of CD4-dependent reporting bias. (2010) (0)
Short-term genomic stability of Clostridium difficile within patients and a gut model (2011) (0)
Nanopore detection of Influenza virus direct from respiratory samples. (2018) (0)
Laboratory standard operating procedures for MassCode polymerase chain reaction for enteric samples (2014) (0)
GENOTYPIC PREDICTION OF ANTI-MICROBIAL SUSCEPTIBILITIES IN STAPHYLOCOCCUS AUREUS (2013) (0)
Infection control team questionnaire (2014) (0)
Genomic epidemiology of complex, multi-species, plasmid-borne bla KPC 1 carbapenemase in Enterobacterales in the UK, 2009-2014 (2020) (0)
Elective ventilation ofpotential organ donors (1995) (0)
Reply to Mills and Linkin. (2014) (0)
Impact of gastrointestinal infections on infection control practice (2014) (0)
IRON-METABOLISM IN TRANSFORMED ERYTHROID-CELLS (1980) (0)
Author Correction: Comparability of automated drusen volume measurements in age-related macular degeneration: a MACUSTAR study report (2022) (0)
Difficulties in assigning AIDS endpoints in clinical trials in resource limited settings: Lessons from DART. (2009) (0)
Epidemiology of paediatric invasive pneumococcal disease in Oxford (2002) (0)
Augmenting public health TB surveillance with genotyping: the Irish mycobacteria reference laboratory (IMRL) experience (2015) (0)
Combined analysis of MassCode and Luminex assay results (2014) (0)
Detecting changes in population trends in infection surveillance using community SARS-CoV-2 prevalence as an exemplar (2022) (0)
Fidaxomicin Versus Vancomycin for Clostridium dif ﬁ cile Infection: Meta-analysis of Pivotal Randomized Controlled Trials for the Study 003/004 Teams (2012) (0)
Corticosteroids for bacterial meningitis - Reply (2008) (0)
Shingles in general practice. (1989) (0)
Prevalence and molecular basis of alpha-thalassaemia in a malaria endemic region of Vietnam (2007) (0)
Viral load—not yet the holy grail (1997) (0)
Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis-response. (2017) (0)
Blinded investigation of phase 1 samples using the Luminex assay (2014) (0)
Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia (2019) (0)
Herpes Simplex and Varicella Zoster Virus Infection in the Elderly (1986) (0)
Dynamics of acquisition and loss of nasal Staphylococcus aureus strains in the community (2012) (0)
Human Immunodeficiency Virus (HIV) (2007) (0)
Use of zidovudine. (1989) (0)
Whole-genome sequencing to determine the extent of Clostridium (2018) (0)
EVICR.net Reading Centre Network (2012) (0)
Case Report: Disseminated, rifampicin resistant Mycobacterium bovis (BCG) infection in an immunocompromised child (2020) (0)
Proceedings: Stimulation of the sensorimotor cortex indicates an inhibitory influence of area 3a on the lateral cervical nucleus of the cat. (1974) (0)
Improving the representativeness of UKs national COVID-19 Infection Survey through spatio-temporal regression and post-stratification (2023) (0)
Lessons from the Concorde trial. (1994) (0)
Pharmaceutical compositions containing substituted 3-hydroxypyridin-4-ones (1992) (0)
Whole genome sequencing in diagnostic microbiology (2016) (0)
Differential diagnostics of aggressive conduct disorder (1990) (0)
Hydroxypyridin-4-ones pour le traitement d'infections parasitaires (1993) (0)
The Search for a Malaria Vaccine: Clinical Trials of DNA-MVA and other Prime-Boost Approaches (2003) (0)
David “DJ” Weatherall (2019) (0)
Patent Number : 5 , 256 , 676 ( 45 ) Date of Patent : ( 54 ) 3-HYDROXY-PYRIDIN-4-ONES USEFUL FORTREATING PARASITIC INFECTIONS (2017) (0)
The design and analysis of HIV clinical trials (1996) (0)
Use of 3-hydroxypyridin-4-ones as selective therapeutics (1993) (0)
Clinical Treatment and Trials (2014) (0)

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