Torsten Seemann
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Computer Science Biology
Torsten Seemann's Degrees
- Bachelors Bioinformatics University of Melbourne
- PhD Genomics Monash University
Why Is Torsten Seemann Influential?
(Suggest an Edit or Addition)Torsten Seemann's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Prokka: rapid prokaryotic genome annotation (2014) (9422)
- SNP-sites: rapid efficient extraction of SNPs from multi-FASTA alignments (2016) (729)
- Colistin Resistance in Acinetobacter baumannii Is Mediated by Complete Loss of Lipopolysaccharide Production (2010) (627)
- Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis. (2008) (519)
- Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer. (2007) (367)
- Genome reduction in Leptospira borgpetersenii reflects limited transmission potential (2006) (336)
- Evolution of Multidrug Resistance during Staphylococcus aureus Infection Involves Mutation of the Essential Two Component Regulator WalKR (2011) (307)
- Genome Sequence of the Saprophyte Leptospira biflexa Provides Insights into the Evolution of Leptospira and the Pathogenesis of Leptospirosis (2008) (299)
- Isolation and rapid sharing of the 2019 novel coronavirus (SARS‐CoV‐2) from the first patient diagnosed with COVID‐19 in Australia (2020) (280)
- Genome analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of the etiologic agent of tuberculosis (2013) (206)
- Two Novel Point Mutations in Clinical Staphylococcus aureus Reduce Linezolid Susceptibility and Switch on the Stringent Response to Promote Persistent Infection (2010) (203)
- Genomic Insights to Control the Emergence of Vancomycin-Resistant Enterococci (2013) (200)
- A Major Role for Mammals in the Ecology of Mycobacterium ulcerans (2010) (187)
- Prospective Whole-Genome Sequencing Enhances National Surveillance of Listeria monocytogenes (2015) (174)
- Global spread of three multidrug-resistant lineages of Staphylococcus epidermidis (2018) (172)
- Human blood MAIT cell subsets defined using MR1 tetramers (2018) (166)
- Tracking the COVID-19 pandemic in Australia using genomics (2020) (165)
- Colistin-Resistant, Lipopolysaccharide-Deficient Acinetobacter baumannii Responds to Lipopolysaccharide Loss through Increased Expression of Genes Involved in the Synthesis and Transport of Lipoproteins, Phospholipids, and Poly-β-1,6-N-Acetylglucosamine (2011) (159)
- Increasing tolerance of hospital Enterococcus faecium to handwash alcohols (2016) (150)
- Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2. (2021) (145)
- On the origin of Mycobacterium ulcerans, the causative agent of Buruli ulcer (2012) (138)
- Comparative Analysis of the First Complete Enterococcus faecium Genome (2012) (127)
- Pathogenesis of leptospirosis: the influence of genomics. (2011) (123)
- Emergence of a ribotype 244 strain of Clostridium difficile associated with severe disease and related to the epidemic ribotype 027 strain. (2014) (115)
- Necrotic Enteritis-Derived Clostridium perfringens Strain with Three Closely Related Independently Conjugative Toxin and Antibiotic Resistance Plasmids (2011) (112)
- A sustained hospital outbreak of vancomycin-resistant Enterococcus faecium bacteremia due to emergence of vanB E. faecium sequence type 203. (2010) (102)
- Isolation of an antimicrobial compound produced by bacteria associated with reef-building corals (2016) (99)
- Outbreak Investigation Using High-Throughput Genome Sequencing within a Diagnostic Microbiology Laboratory (2013) (91)
- Convergent Adaptation in the Dominant Global Hospital Clone ST239 of Methicillin-Resistant Staphylococcus aureus (2015) (89)
- Analysis of the Small RNA Transcriptional Response in Multidrug-Resistant Staphylococcus aureus after Antimicrobial Exposure (2013) (85)
- The Dominant Australian Community-Acquired Methicillin-Resistant Staphylococcus aureus Clone ST93-IV [2B] Is Highly Virulent and Genetically Distinct (2011) (84)
- Single Nucleotide Polymorphism Typing of Mycobacterium ulcerans Reveals Focal Transmission of Buruli Ulcer in a Highly Endemic Region of Ghana (2010) (83)
- Key experimental evidence of chromosomal DNA transfer among selected tuberculosis-causing mycobacteria (2016) (82)
- Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus (2007) (77)
- Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis (2020) (77)
- Shiga toxin-producing Escherichia coli strains negative for locus of enterocyte effacement. (2009) (77)
- PAT-seq: a method to study the integration of 3′-UTR dynamics with gene expression in the eukaryotic transcriptome (2015) (72)
- Genome Sequences and Phylogenetic Analysis of K88- and F18-Positive Porcine Enterotoxigenic Escherichia coli (2011) (70)
- Fis Is Essential for Capsule Production in Pasteurella multocida and Regulates Expression of Other Important Virulence Factors (2010) (66)
- Pseudomonas aeruginosa AES-1 Exhibits Increased Virulence Gene Expression during Chronic Infection of Cystic Fibrosis Lung (2011) (65)
- Complete Genome Sequence of Staphylococcus aureus Strain JKD6008, an ST239 Clone of Methicillin-Resistant Staphylococcus aureus with Intermediate-Level Vancomycin Resistance (2010) (65)
- Co-circulation of multidrug-resistant Shigella among men who have sex with men, Australia. (2019) (63)
- Community-driven development for computational biology at Sprints, Hackathons and Codefests (2014) (63)
- Binding of Clostridium perfringens to collagen correlates with the ability to cause necrotic enteritis in chickens. (2015) (62)
- Genomic Evidence for a Globally Distributed, Bimodal Population in the Ovine Footrot Pathogen Dichelobacter nodosus (2014) (60)
- Bridging of Neisseria gonorrhoeae lineages across sexual networks in the HIV pre-exposure prophylaxis era (2019) (59)
- Exploring the Zoonotic Potential of Mycobacterium avium Subspecies paratuberculosis through Comparative Genomics (2011) (58)
- Deciphering the genetic basis for polyketide variation among mycobacteria producing mycolactones (2008) (58)
- Genomic epidemiology and antimicrobial resistance of Neisseria gonorrhoeae in New Zealand (2017) (56)
- Shiga Toxin–producing Escherichia coli Strains Negative for Locus of Enterocyte Effacement (2009) (56)
- In silico prediction of (2014) (55)
- Unstable chromosome rearrangements in Staphylococcus aureus cause phenotype switching associated with persistent infections (2019) (54)
- Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch (2021) (53)
- Decreased Vancomycin Susceptibility in Staphylococcus aureus Caused by IS256 Tempering of WalKR Expression (2013) (53)
- Structure, Function, and Biosynthetic Origin of Octapeptin Antibiotics Active against Extensively Drug-Resistant Gram-Negative Bacteria. (2018) (52)
- Attachment and Invasion of Neisseria meningitidis to Host Cells Is Related to Surface Hydrophobicity, Bacterial Cell Size and Capsule (2013) (52)
- Resequencing the Mycobacterium avium subsp. paratuberculosis K10 Genome: Improved Annotation and Revised Genome Sequence (2010) (52)
- TcsL Is an Essential Virulence Factor in Clostridium sordellii ATCC 9714 (2011) (52)
- Comparative analysis of the complete genome of an epidemic hospital sequence type 203 clone of vancomycin-resistant Enterococcus faecium (2013) (50)
- Temporal development of the oral microbiome and prediction of early childhood caries (2019) (49)
- Translating genomics into practice for real-time surveillance and response to carbapenemase-producing Enterobacteriaceae: evidence from a complex multi-institutional KPC outbreak (2018) (48)
- Pathogenomics of Pasteurella multocida. (2012) (46)
- Complete Genome Sequence of Staphylococcus aureus Strain JKD6159, a Unique Australian Clone of ST93-IV Community Methicillin-Resistant Staphylococcus aureus (2010) (46)
- Validation of a single-step, single-tube reverse transcription loop-mediated isothermal amplification assay for rapid detection of SARS-CoV-2 RNA (2020) (44)
- Hyperexpression of α-hemolysin explains enhanced virulence of sequence type 93 community-associated methicillin-resistant Staphylococcus aureus (2014) (44)
- Serological Evaluation of Mycobacterium ulcerans Antigens Identified by Comparative Genomics (2010) (43)
- Genomics for Molecular Epidemiology and Detecting Transmission of Carbapenemase-Producing Enterobacterales in Victoria, Australia, 2012 to 2016 (2019) (42)
- Whole genome analysis reveals the diversity and evolutionary relationships between necrotic enteritis-causing strains of Clostridium perfringens (2018) (42)
- Genome Analysis and Phylogenetic Relatedness of Gallibacterium anatis Strains from Poultry (2013) (41)
- Convergent Evolution Driven by Rifampin Exacerbates the Global Burden of Drug-Resistant Staphylococcus aureus (2018) (41)
- Evaluation of 238 antigens of Leptospira borgpetersenii serovar Hardjo for protection against kidney colonisation. (2013) (40)
- Rapid Emergence and Evolution of Staphylococcus aureus Clones Harboring fusC-Containing Staphylococcal Cassette Chromosome Elements (2016) (40)
- Mitochondrial Genome Sequence of the Scabies Mite Provides Insight into the Genetic Diversity of Individual Scabies Infections (2016) (39)
- Emergence of endemic MLST non-typeable vancomycin-resistant Enterococcus faecium. (2016) (39)
- Whole-genome sequencing reveals transmission of gonococcal antibiotic resistance among men who have sex with men: an observational study (2017) (39)
- Complete Genome Sequence of the Frog Pathogen Mycobacterium ulcerans Ecovar Liflandii (2012) (38)
- Genomics-informed responses in the elimination of COVID-19 in Victoria, Australia: an observational, genomic epidemiological study (2021) (37)
- Ten recommendations for creating usable bioinformatics command line software (2013) (36)
- Comparison of classical multi-locus sequence typing software for next-generation sequencing data (2017) (36)
- Evolutionary origins of the emergent ST796 clone of vancomycin resistant Enterococcus faecium (2017) (35)
- Mycolactone Gene Expression Is Controlled by Strong SigA-Like Promoters with Utility in Studies of Mycobacterium ulcerans and Buruli Ulcer (2009) (35)
- Population Genomics and Phylogeography of an Australian Dairy Factory Derived Lytic Bacteriophage (2012) (35)
- A large outbreak of Campylobacter jejuni infection in a university college caused by chicken liver pâté, Australia, 2013 (2016) (35)
- Emergence of High-Level Colistin Resistance in an Acinetobacter baumannii Clinical Isolate Mediated by Inactivation of the Global Regulator H-NS (2018) (34)
- Natural Variation Identifies ICARUS1, a Universal Gene Required for Cell Proliferation and Growth at High Temperatures in Arabidopsis thaliana (2015) (34)
- Transcriptional Profiling of a Yeast Colony Provides New Insight into the Heterogeneity of Multicellular Fungal Communities (2012) (34)
- Comparative Genomic Analysis of Asian Haemorrhagic Septicaemia-Associated Strains of Pasteurella multocida Identifies More than 90 Haemorrhagic Septicaemia-Specific Genes (2015) (33)
- Porphyromonas gingivalis Uses Specific Domain Rearrangements and Allelic Exchange to Generate Diversity in Surface Virulence Factors (2017) (32)
- Adaptive Change Inferred from Genomic Population Analysis of the ST93 Epidemic Clone of Community-Associated Methicillin-Resistant Staphylococcus aureus (2014) (32)
- Functional Analysis of a Bacitracin Resistance Determinant Located on ICECp1, a Novel Tn916-Like Element from a Conjugative Plasmid in Clostridium perfringens (2015) (32)
- Complete Genome Sequence of the Avian Pathogenic Escherichia coli Strain APEC O78 (2013) (32)
- Genomic exploration of sequential clinical isolates reveals a distinctive molecular signature of persistent Staphylococcus aureus bacteraemia (2018) (32)
- A phylogenomic framework for assessing the global emergence and evolution of clonal complex 398 methicillin-resistant Staphylococcus aureus (2017) (30)
- Zinc-binding to the cytoplasmic PAS domain regulates the essential WalK histidine kinase of Staphylococcus aureus (2018) (30)
- NGMASTER: in silico multi-antigen sequence typing for Neisseria gonorrhoeae (2016) (30)
- Multiple Introductions and Recent Spread of the Emerging Human Pathogen Mycobacterium ulcerans across Africa (2017) (29)
- Comprehensive antibiotic-linked mutation assessment by resistance mutation sequencing (RM-seq) (2018) (28)
- Best practice data life cycle approaches for the life sciences (2017) (27)
- Genomic Insights into a Sustained National Outbreak of Yersinia pseudotuberculosis (2016) (26)
- Prolonged Outbreak of Multidrug-Resistant Shigella sonnei Harboring blaCTX-M-27 in Victoria, Australia (2020) (26)
- Whole Genome Comparisons Suggest Random Distribution of Mycobacterium ulcerans Genotypes in a Buruli Ulcer Endemic Region of Ghana (2015) (26)
- Leptospiral LruA Is Required for Virulence and Modulates an Interaction with Mammalian Apolipoprotein AI (2013) (25)
- Genomic resources and draft assemblies of the human and porcine varieties of scabies mites, Sarcoptes scabiei var. hominis and var. suis (2016) (25)
- The Lipoprotein LpqW Is Essential for the Mannosylation of Periplasmic Glycolipids in Corynebacteria* (2012) (24)
- Possible healthcare-associated transmission as a cause of secondary infection and population structure of Staphylococcus aureus isolates from two wound treatment centres in Ghana (2016) (24)
- Large tandem chromosome expansions facilitate niche adaptation during persistent infection with drug-resistant Staphylococcus aureus (2015) (24)
- The changing landscape of vancomycin-resistant Enterococcus faecium in Australia: a population-level genomic study (2018) (24)
- Complete Genome Sequence of Gallibacterium anatis Strain UMN179, Isolated from a Laying Hen with Peritonitis (2011) (23)
- Genomic analysis of ST88 community-acquired methicillin resistant Staphylococcus aureus in Ghana (2017) (22)
- Seven Salmonella Typhimurium Outbreaks in Australia Linked by Trace-Back and Whole Genome Sequencing. (2018) (22)
- Mobile phones and computer keyboards: unlikely reservoirs of multidrug-resistant organisms in the tertiary intensive care unit. (2018) (22)
- Validation of a single-step, single-tube reverse transcription-loop-mediated isothermal amplification assay for rapid detection of SARS-CoV-2 RNA (2020) (21)
- Comparative Genomics Shows That Mycobacterium ulcerans Migration and Expansion Preceded the Rise of Buruli Ulcer in Southeastern Australia (2018) (21)
- Vancomycin-resistant Enterococcus faecium sequence type 796 - rapid international dissemination of a new epidemic clone (2018) (20)
- Emergence of multidrug resistance in locally-acquired human infections with Salmonella Typhimurium in Australia owing to a new clade harbouring blaCTX-M-9. (2017) (20)
- Incorporating Whole-Genome Sequencing into Public Health Surveillance: Lessons from Prospective Sequencing of Salmonella Typhimurium in Australia. (2018) (19)
- Bioinformatic prediction of the exportome of Babesia bovis and identification of novel proteins in parasite-infected red blood cells. (2013) (19)
- Functional analysis of the first complete genome sequence of a multidrug resistant sequence type 2 Staphylococcus epidermidis (2016) (19)
- Capacity To Utilize Raffinose Dictates Pneumococcal Disease Phenotype (2019) (19)
- Regulation of the 18 kDa heat shock protein in Mycobacterium ulcerans: an alpha‐crystallin orthologue that promotes biofilm formation (2010) (19)
- Determination of the small RNA GcvB regulon in the Gram-negative bacterial pathogen Pasteurella multocida and identification of the GcvB seed binding region (2018) (18)
- In silico prediction of Gallibacterium anatis pan-immunogens (2014) (18)
- A Genomic Island in Salmonella enterica ssp. salamae Provides New Insights on the Genealogy of the Locus of Enterocyte Effacement (2012) (18)
- Correspondence: Spontaneous secondary mutations confound analysis of the essential two-component system WalKR in Staphylococcus aureus (2016) (17)
- Target-Specific Assay for Rapid and Quantitative Detection of Mycobacterium chimaera DNA (2017) (17)
- Mining the Methylome Reveals Extensive Diversity in Staphylococcus epidermidis Restriction Modification (2019) (17)
- Genome sequence comparisons of serial multi-drug-resistant Mycobacterium tuberculosis isolates over 21 years of infection in a single patient (2015) (17)
- The Use of High-Throughput DNA Sequencing in the Investigation of Antigenic Variation: Application to Neisseria Species (2014) (16)
- Comprehensive Genomic Investigation of Adaptive Mutations Driving the Low-Level Oxacillin Resistance Phenotype in Staphylococcus aureus (2020) (16)
- Sharing Is Caring: International Sharing of Data Enhances Genomic Surveillance of Listeria monocytogenes. (2016) (15)
- Key parameters for genomics-based real-time detection and tracking of multidrug-resistant bacteria: a systematic analysis. (2021) (15)
- Reconstruction of the Genomes of Drug-Resistant Pathogens for Outbreak Investigation through Metagenomic Sequencing (2019) (15)
- Genome analysis Prokka: rapid prokaryotic genome annotation (2014) (15)
- VAGUE: a graphical user interface for the Velvet assembler (2013) (15)
- Best practice data life cycle approaches for the life sciences. (2017) (15)
- Sphingobacterium cellulitidis sp. nov., isolated from clinical and environmental sources. (2017) (14)
- Isolation of Salmonella enterica Serovar Kentucky Strain ST 198 and Its H2S-Negative Variant from a Patient: Implications for Diagnosis (2014) (13)
- A Genomic Approach to Resolving Relapse versus Reinfection among Four Cases of Buruli Ulcer (2015) (13)
- Bionitio: demonstrating and facilitating best practices for bioinformatics command-line software (2019) (12)
- Methicillin Resistant Staphylococcus aureus Transmission in a Ghanaian Burn Unit: The Importance of Active Surveillance in Resource-Limited Settings (2017) (11)
- A Supervised Statistical Learning Approach for Accurate Legionella pneumophila Source Attribution during Outbreaks (2017) (11)
- Remodeling of pSK1 Family Plasmids and Enhanced Chlorhexidine Tolerance in a Dominant Hospital Lineage of Methicillin-Resistant Staphylococcus aureus (2019) (10)
- SARS-CoV-2 infection results in immune responses in the respiratory tract and peripheral blood that suggest mechanisms of disease severity (2022) (10)
- Biosynthesis and Ether-Bridge Formation in Nargenicin Macrolides. (2019) (10)
- De novo genome assembly (2016) (9)
- The First Isolation and Whole Genome Sequencing of Murray Valley Encephalitis Virus from Cerebrospinal Fluid of a Patient with Encephalitis (2018) (9)
- Emergence and divergence of major lineages of Shiga-toxin-producing Escherichia coli in Australia (2019) (9)
- Incursions of Candida auris into Australia, 2018 (2020) (9)
- Case Report: Confirmation by Metagenomic Sequencing of Visceral Leishmaniasis in an Immunosuppressed Returned Traveler. (2020) (8)
- AusTrakka: Fast-tracking nationalized genomics surveillance in response to the COVID-19 pandemic (2022) (7)
- Niche-specific genome degradation and convergent evolution shaping Staphylococcus aureus adaptation during severe infections (2022) (7)
- Genomic Epidemiology and Antimicrobial Resistance Mechanisms of Imported Typhoid in Australia (2021) (7)
- Sprints, Hackathons and Codefests as community gluons in computational biology (2013) (7)
- Tuberculosis in Australia's tropical north: a population-based genomic epidemiological study (2021) (6)
- Genomic insights into a sustained national outbreak of Yersinia pseudotuberculosis. (2017) (6)
- Optimising genomic approaches for identifying vancomycin-resistant Enterococcus faecium transmission in healthcare settings (2022) (6)
- Correction: Whole Genome Comparisons Suggest Random Distribution of Mycobacterium ulcerans Genotypes in a Buruli Ulcer Endemic Region of Ghana (2015) (6)
- Daptomycin Resistance Occurs Predominantly in vanA-Type Vancomycin-Resistant Enterococcus faecium in Australasia and Is Associated With Heterogeneous and Novel Mutations (2021) (6)
- Comparative Transcriptomic and Functional Assessments of Linezolid-Responsive Small RNA Genes in Staphylococcus aureus (2020) (5)
- Search and Contain: Impact of an Integrated Genomic and Epidemiological Surveillance and Response Program for Control of Carbapenemase-producing Enterobacterales (2020) (5)
- Wave 2 strains of atypical Vibrio cholerae El Tor caused the 2009–2011 cholera outbreak in Papua New Guinea (2019) (5)
- Comparison Of Multi-locus Sequence Typing software For next generation sequencing data (2017) (5)
- Multi-site implementation of whole genome sequencing for hospital infection control: A prospective genomic epidemiological analysis (2022) (5)
- An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance (2023) (5)
- The Organization of Leptospira at a Genomic Level (2006) (5)
- Complete microbial genomes for public health in Australia and Southwest Pacific (2019) (5)
- Complete Genome Sequence of Leptospira interrogans Serovar Bratislava, Strain PigK151 (2015) (5)
- Complete microbial genomes for public health in Australia and the Southwest Pacific (2020) (4)
- A nonclonal outbreak of vancomycin-sensitive Enterococcus faecalis bacteremia in a neonatal intensive care unit (2019) (3)
- GFF3toEMBL: Preparing annotated assemblies for submission to EMBL (2016) (3)
- Genomic investigation of Staphylococcus aureus recovered from Gambian women and newborns following an oral dose of intra-partum azithromycin (2019) (3)
- Genomic diversity of antimicrobial resistance in non-typhoidal Salmonella in Victoria, Australia (2021) (3)
- Real-time genomic and epidemiological investigation of a multi-institution outbreak of KPC-producing Enterobacteriaceae: a translational study (2017) (3)
- Biosynthesis and Ether‐Bridge Formation in Nargenicin Macrolides (2019) (2)
- Galaxy Genome Annotation project: Integrating Galaxy and GMOD for genome annotation (2018) (2)
- On the origin of Mycobacterium ulcerans, the causative agent of Buruli ulcer (2012) (2)
- Accessible Platform for High-Throughput COVID-19 Molecular Diagnostics and Genome Sequencing Using a Repurposed 3D Printer for RNA Extraction (2021) (2)
- Viral genomics to inform infection control response in occupational COVID-19 transmission (2020) (2)
- COVID-19: Integrating genomic and epidemiological data to inform public health interventions and policy in Tasmania, Australia (2021) (2)
- The changing landscape of VREfm in Victoria, Australia: a State-wide genomic snapshot (2018) (2)
- Immune responses in COVID-19 respiratory tract and blood reveal mechanisms of disease severity (2021) (2)
- Systematic analysis of key parameters for genomics-based real-time detection and tracking of multidrug-resistant bacteria (2020) (2)
- Victorian Bioinformatics Consortium: Providing Essential Support for Victorian Science (2006) (2)
- Second SARS‐CoV‐2 infections twelve months after initial infections in Australia, confirmed by genomic analysis (2021) (2)
- Comment on: Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data. (2017) (1)
- Genomics-Informed Responses in the Elimination of COVID-19 in Australia (2021) (1)
- Decreased Vancomycin Susceptibility in Staphylococcus aureus caused by IS 256 Tempering of 1 WalKR Expression 2 3 (2013) (1)
- De novo transcriptome assembly for the spiny mouse (Acomys cahirinus) (2017) (1)
- Whole genome analysis reveals the diversity and evolutionary relationships between necrotic enteritis-causing strains of Clostridium perfringens (2018) (1)
- State-wide genomic epidemiology investigations of COVID-19 in healthcare workers in 2020 Victoria, Australia: Qualitative thematic analysis to provide insights for future pandemic preparedness (2022) (1)
- Improved Genome Sequence of Australian Methicillin-Resistant Staphylococcus aureus Strain JKD6159 (2023) (1)
- SaffronTree: Fast, reference-free pseudo-phylogenomic trees from reads or contigs (2017) (1)
- Vancomycin-resistant Enterococcus faecium sequence type 796 - rapid international dissemination of a new epidemic clone (2018) (1)
- State-wide Genomic Epidemiology Investigations of COVID-19 Infections in Healthcare Workers: Insights for Future Pandemic Preparedness (2021) (1)
- Refutation: Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus. (2016) (1)
- Draft Genome Sequences of Two Strains of a Newly Described Species, Sphingobacterium cellulitidis (2017) (1)
- Genome reconstruction and characterisation of extensively drug-resistant bacterial pathogens through direct metagenomic sequencing of human faeces (2017) (1)
- MammoSapiens: eResearch of the lactation program. (2008) (1)
- MammoSapiens: eResearch of the lactation program. Building online facilities for collaborative molecular and evolutionary analysis of lactation and other biological systems from gene sequences and gene expression data. (2008) (1)
- Bridging the gap between bioinformatics and the clinical and public health microbiology laboratory: An ISO-accredited genomics workflow for antimicrobial resistance (2022) (1)
- Genomic Exploration of Within-Host Microevolution Reveals a Distinctive Molecular Signature of Persistent Staphylococcus aureus Bacteraemia (2018) (1)
- Genomic exploration of sequential clinical isolates reveals a distinctive molecular signature of persistent Staphylococcus aureus bacteraemia (2018) (1)
- Defective Severe Acute Respiratory Syndrome Coronavirus 2 Immune Responses in an Immunocompromised Individual With Prolonged Viral Replication (2021) (1)
- Bridging of Neisseria Gonorrhoeae Across Diverse Sexual Networks in the HIV Pre-Exposure Prophylaxis (PrEP) Era: A Clinical and Molecular Epidemiological Study (2019) (1)
- The ΦBT1 large serine recombinase catalyzes DNA integration at pseudo-attB sites in the genus Nocardia (2018) (1)
- Genomic Evidence of In-Flight SARS-CoV-2 Transmission, India to Australia, April 2021 (2022) (1)
- Comparative analysis of the complete genome of an epidemic hospital sequence type 203 clone of vancomycin-resistant Enterococcus faecium (2013) (1)
- In silico prediction of Gallibacterium anatis pan - (2014) (1)
- Zinc-binding to the cytoplasmic PAS domain regulates the essential WalK histidine kinase of Staphylococcus aureus (2019) (1)
- Genome Sequences and Phylogenetic Analysis of K 88-and F 18-Positive 1 Porcine Enterotoxigenic Escherichia coli 2 3 (2011) (1)
- Correction: A Genomic Island in Salmonella enterica ssp. salamae Provides New Insights on the Genealogy of the Locus of Enterocyte Effacement (2012) (0)
- Correction for Kennan et al., “Genomic Evidence for a Globally Distributed, Bimodal Population in the Ovine Footrot Pathogen Dichelobacter nodosus” (2019) (0)
- Mycobacterium tuberculosis on the evolution of marinum Mycobacterium Insights from the complete genome sequence of Material Supplemental (2008) (0)
- CLOCK GENERATOR FOR ALL-BIOLOGICAL PURIFICATION (1998) (0)
- NastyBugs : A simple method for extracting antimicrobial resistance information from metagenomes (2017) (0)
- Building online facilities for collaborative molecular and evolutionary analysis of lactation and other biological systems from gene sequences and gene expression data (2008) (0)
- Hyperexpression of α-hemolysin explains enhanced virulence of sequence type 93 community-associated methicillin-resistant Staphylococcus aureus (2014) (0)
- A target-specific assay for rapid and quantitative detection of Mycobacterium chimaera DNA in environmental and clinical specimens (2017) (0)
- Integrative omics identifies conserved and pathogen-specific responses of sepsis-causing bacteria (2023) (0)
- MULTIPLE LINEAGES OF MULTIRESISTANT SHIGELLA IN AUSTRALIA (2019) (0)
- Remodelling of pSK1 Family Plasmids and Enhanced Chlorhexidine Tolerance in Methicillin-Resistant Staphylococcus aureus (2018) (0)
- Title : Remodelling of pSK 1 Family Plasmids and Enhanced Chlorhexidine Tolerance in a 1 Dominant Hospital Lineage of Methicillin-Resistant Staphylococcus aureus 2 Running Title : Evolutionary Dynamics of pSK 1 3 (2019) (0)
- Global spread of three multidrug-resistant lineages of Staphylococcus epidermidis (2018) (0)
- Implications for Diagnosis S-Negative Variant from a Patient: 2 Kentucky Strain ST 198 and Its H Isolation of Salmonella enterica Serovar (2014) (0)
- D68 during Period of Increased Influenza-Like Illness, Maryland, USA, 2021 (2022) (0)
- O07.1 Multiple lineages of multiresistant shigella in australia (2019) (0)
- DRUG RESISTANCE AND GENETIC PROFILE OF BACTERIAL SPECIES ASSOCIATED WITH BURULI ULCER WOUND INFECTIONS IN TWO DISTRICTS OF GHANA (2017) (0)
- Phylogenomic investigation of an outbreak of fluoroquinolone-resistant Salmonella enterica subsp. enterica serovar Paratyphi A in Phnom Penh, Cambodia (2023) (0)
- Introduction to de novo genome assembly (2017) (0)
- AusTrakka: Fast-tracking nationalized genomics surveillance in response to the COVID-19 pandemic (2022) (0)
- Functional genomics reveals extensive diversity in Staphylococcus epidermidis restriction modification systems compared to Staphylococcus aureus (2019) (0)
- Vancomycin-Resistant Enterococci Genomic Insights to Control the Emergence of 2013 (2013) (0)
- Galaxy in public health – the microbial genomics virtual laboratory (2015) (0)
- Details on the four patients with recurrent BU. (2015) (0)
- Functional Genomic, Phenomic, and Proteomic Analysis of Salmonella Sofia (2011) (0)
- O19.2 Bridging of neisseria gonorrhoeae across diverse sexual networks in the HIV PrEP era (2019) (0)
- Comprehensive antibiotic-linked mutation assessment by resistance mutation sequencing (RM-seq) (2018) (0)
- 170323 Reworked WalKR paper with figures (2023) (0)
- Convergent Evolution Driven by Rifampin Exacerbates the Global Burden of Drug-Resistant <named-content content-type='genus-species'>Staphylococcus aureus</named-content> (2018) (0)
- The two-component regulator WalKR provides an essential link between cell wall homeostasis with DNA replication in Staphylococcus aureus (2023) (0)
- A supervised statistical learning approach for accurate 1 Legionella pneumophila source attribution during outbreaks 2 3 4 (2017) (0)
- Bioinformatic investigation of discordant sequence data for SARS-CoV-2: insights for robust genomic analysis during pandemic surveillance (2023) (0)
- Comparing bacterial isolates (2016) (0)
- Navigating the research data life cycle (2016) (0)
- Next-generation sequencing for the characterisation of bacterial respiratory pathogens (2016) (0)
- Genomic characterisation reveals a dominant lineage of SARS-CoV-2 in Papua New Guinea (2022) (0)
- Abstracts of the Eighth EDCTP Forum, 6–9 November 2016 (2017) (0)
- TipToft: detecting plasmids contained in uncorrected long read sequencing data (2019) (0)
- Complete genomes: the long and the short of it (2016) (0)
- Pasteurella multocida - ReadingSample (2016) (0)
- Isolation of Salmonella enterica serovar Kentucky ST 198 strain and its H2S-negative variant from a (2014) (0)
- Search and Contain: Centralised Prospective Genomic and Epidemiological Surveillance for the Identification and Control of Carbapenemase-Producing Enterobacterales Transmission (2019) (0)
- High performance Legionella pneumophila source attribution using genomics-based machine learning classification (2023) (0)
- Correction: Mycolactone Gene Expression Is Controlled by Strong SigA-Like Promoters with Utility in Studies of Mycobacterium ulcerans and Buruli Ulcer (2010) (0)
- the causative agent of Buruli ulcer Mycobacterium ulcerans of evolution and niche adaptation inferred from the genome (2007) (0)
- Comparative analysis of pathogenic leptospira genomes (2006) (0)
- Figure 7: Bayesian evolutionary analysis indicates each of the phylogenetic clades corresponding to the genomic clusters emerged prior to the detection of KPC in Victoria. (2018) (0)
- Flow chart outlining the patients contributing isolates to this analysis. (2015) (0)
- Complete Genome Sequence of the Frog Pathogen Mycobacterium (2012) (0)
- Optimising genomic approaches for identifying vancomycin-resistant Enterococcus faecium transmission in healthcare settings (2022) (0)
- Healthcare Worker Hand-Held Devices as Vectors for Multidrug-Resistant Organisms in Intensive Care Patients (2016) (0)
- Enterotoxigenic Escherichia coli Analysis of K 88-and F 18-Positive Porcine Genome Sequences and Phylogenetic (2011) (0)
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What Schools Are Affiliated With Torsten Seemann?
Torsten Seemann is affiliated with the following schools:
