Wen-Hsiung Li
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Taiwanese-American scientist
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Wen-Hsiung Libiology Degrees
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#1318
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#2233
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#671
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Genetics
#174
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#215
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#99
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Biology
Wen-Hsiung Li's Degrees
- Bachelors Agriculture National Taiwan University
Why Is Wen-Hsiung Li Influential?
(Suggest an Edit or Addition)According to Wikipedia, Wen-Hsiung Li is a Taiwanese-American scientist working in the fields of molecular evolution, population genetics, and genomics. He is currently the James Watson Professor of Ecology and Evolution at the University of Chicago and a Principal Investigator at the Institute of Information Science and Genomics Research Center, Academia Sinica, Taiwan.
Wen-Hsiung Li's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Fundamentals of molecular evolution (1990) (1568)
- Comparative Analysis of the Receptor-Like Kinase Family in Arabidopsis and Rice (2004) (968)
- Role of duplicate genes in genetic robustness against null mutations (2003) (840)
- Unbiased estimation of the rates of synonymous and nonsynonymous substitution (2006) (686)
- An evolutionary perspective on synonymous codon usage in unicellular organisms (1986) (647)
- Uncovering Small RNA-Mediated Responses to Phosphate Deficiency in Arabidopsis by Deep Sequencing1[W][OA] (2009) (636)
- Mutation rates differ among regions of the mammalian genome (1989) (606)
- Human polymorphism at microRNAs and microRNA target sites (2007) (557)
- Pseudogenes as a paradigm of neutral evolution (1981) (499)
- Evolutionary analyses of the human genome (2001) (426)
- Dating the Monocot–Dicot Divergence and the Origin of Core Eudicots Using Whole Chloroplast Genomes (2004) (426)
- Extent of gene duplication in the genomes of Drosophila, nematode, and yeast. (2002) (414)
- Rates of Nucleotide Substitution in Angiosperm Mitochondrial DNA Sequences and Dates of Divergence Between Brassica and Other Angiosperm Lineages (1999) (386)
- Sequence, structure, receptor-binding domains and internal repeats of human apolipoprotein B-100 (1986) (380)
- Expression divergence between duplicate genes. (2005) (342)
- Mammalian housekeeping genes evolve more slowly than tissue-specific genes. (2004) (340)
- The molecular clock runs more slowly in man than in apes and monkeys (1987) (330)
- Is the guinea-pig a rodent? (1991) (315)
- Extremely high genetic diversity in a single tumor points to prevalence of non-Darwinian cell evolution (2015) (308)
- Patterns of nucleotide substitution in pseudogenes and functional genes (2005) (253)
- Strong male-driven evolution of DNA sequences in humans and apes (2002) (245)
- The K(A)/K(S) ratio test for assessing the protein-coding potential of genomic regions: an empirical and simulation study. (2002) (234)
- Fundamentals of Molecular Evolution, 2nd Edition (2000) (233)
- Simultaneous amino acid substitutions at antigenic sites drive influenza A hemagglutinin evolution (2007) (225)
- Divergence in the spatial pattern of gene expression between human duplicate genes. (2003) (225)
- Male-driven evolution of DNA sequences (1993) (219)
- Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications (2005) (217)
- Transcription Factor Families Have Much Higher Expansion Rates in Plants than in Animals1 (2005) (207)
- Evolution of DNA Sequences (1985) (196)
- Signalling pathway for RKIP and Let‐7 regulates and predicts metastatic breast cancer (2011) (189)
- Larger genetic differences within africans than between Africans and Eurasians. (2002) (188)
- Duplicate genes increase gene expression diversity within and between species (2004) (188)
- Structure of Apolipoprotein B‐100 of Human Low Density Lipoproteins (1989) (182)
- Chromosome-wide SNPs reveal an ancient origin for Plasmodium falciparum (2002) (164)
- A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection. (2007) (164)
- MicroRNA regulation of human protein protein interaction network. (2007) (162)
- Low nucleotide diversity in chimpanzees and bonobos. (2003) (160)
- Natural selection on cis and trans regulation in yeasts. (2010) (158)
- Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons (2005) (157)
- Different evolutionary patterns between young duplicate genes in the human genome (2003) (152)
- Coordinated histone modifications are associated with gene expression variation within and between species. (2011) (150)
- Molecular evolution of trichromacy in primates (1998) (150)
- Evidence from opsin genes rejects nocturnality in ancestral primates. (2005) (146)
- Characterizing Regulatory and Functional Differentiation between Maize Mesophyll and Bundle Sheath Cells by Transcriptomic Analysis1[W][OA] (2012) (139)
- Patterns of segmental duplication in the human genome. (2004) (139)
- Evolutionary diversification of DNA methyltransferases in eukaryotic genomes. (2005) (136)
- Patterns of expansion and expression divergence in the plant polygalacturonase gene family (2006) (135)
- Slow molecular clocks in Old World monkeys, apes, and humans. (2002) (129)
- An evaluation of the molecular clock hypothesis using mammalian DNA sequences (2007) (127)
- The size distribution of insertions and deletions in human and rodent pseudogenes suggests the logarithmic gap penalty for sequence alignment (1995) (123)
- DNA replication timing and selection shape the landscape of nucleotide variation in cancer genomes (2012) (122)
- CpG island density and its correlations with genomic features in mammalian genomes (2008) (121)
- Rates of synonymous substitution in plant nuclear genes (1989) (118)
- What Amino Acid Properties Affect Protein Evolution? (1998) (116)
- Gene essentiality, gene duplicability and protein connectivity in human and mouse. (2007) (116)
- Molecular evolution meets the genomics revolution (2003) (115)
- Opsin gene and photopigment polymorphism in a prosimian primate (2002) (111)
- Nucleotide Diversity in Gorillas (2004) (110)
- Organismal complexity, protein complexity, and gene duplicability (2003) (105)
- RNA landscape of evolution for optimal exon and intron discrimination (2008) (104)
- Signatures of domain shuffling in the human genome. (2002) (103)
- Down-Regulation of Cytokinin Oxidase 2 Expression Increases Tiller Number and Improves Rice Yield (2015) (102)
- Proportion of solvent-exposed amino acids in a protein and rate of protein evolution. (2007) (102)
- Inconsistency of the Maximum-parsimony Method: the Case of Five Taxa With a Molecular Clock (1993) (99)
- Multidimensional scaling for large genomic data sets (2008) (99)
- Lowly expressed human microRNA genes evolve rapidly. (2009) (99)
- Molecular evolution of bat color vision genes. (2003) (99)
- Deletions in processed pseudogenes accumulate faster in rodents than in humans (1989) (98)
- On the rate of DNA sequence evolution inDrosophila (1989) (97)
- Statistical methods for identifying yeast cell cycle transcription factors. (2005) (94)
- Antroquinonol from ethanolic extract of mycelium of Antrodia cinnamomea protects hepatic cells from ethanol-induced oxidative stress through Nrf-2 activation. (2011) (93)
- Phylogenetic analysis based on rRNA sequences supports the archaebacterial rather than the eocyte tree (1989) (93)
- Quantitative characterization of the transcriptional regulatory network in the yeast cell cycle (2004) (93)
- Rate of protein evolution versus fitness effect of gene deletion. (2003) (92)
- Intragenic Spatial Patterns of Codon Usage Bias in Prokaryotic and Eukaryotic Genomes (2004) (92)
- Alternative mRNA Splicing and Differential Promoter Utilization Determine Tissue-specific Expression of the Apolipoprotein B mRNA-editing Protein (Apobec1) Gene in Mice. (1995) (91)
- Positional distribution of transcription factor binding sites in Arabidopsis thaliana (2016) (87)
- Evolution of the Hominoid Semenogelin Genes, the Major Proteins of Ejaculated Semen (2003) (86)
- A new measure of the robustness of biochemical networks (2005) (86)
- The Chicken Frizzle Feather Is Due to an α-Keratin (KRT75) Mutation That Causes a Defective Rachis (2012) (86)
- Role of positive selection in the retention of duplicate genes in mammalian genomes (2006) (86)
- Exome Sequencing of Oral Squamous Cell Carcinoma Reveals Molecular Subgroups and Novel Therapeutic Opportunities (2017) (85)
- Human TRIM71 and its nematode homologue are targets of let-7 microRNA and its zebrafish orthologue is essential for development. (2007) (84)
- Origins, lineage-specific expansions, and multiple losses of tyrosine kinases in eukaryotes. (2004) (82)
- Human SNPs reveal no evidence of frequent positive selection. (2005) (82)
- Protein function, connectivity, and duplicability in yeast. (2006) (80)
- A study of the phylogeny of Brassica rapa, B. nigra, Raphanus sativus, and their related genera using noncoding regions of chloroplast DNA. (2002) (80)
- Assembling a cellulase cocktail and a cellodextrin transporter into a yeast host for CBP ethanol production (2013) (79)
- Studying tumorigenesis through network evolution and somatic mutational perturbations in the cancer interactome. (2014) (79)
- The nonsynonymous/synonymous substitution rate ratio versus the radical/conservative replacement rate ratio in the evolution of mammalian genes. (2007) (79)
- Inheritance of gene expression level and selective constraints on trans- and cis-regulatory changes in yeast. (2013) (79)
- Prediction of splice sites with dependency graphs and their expanded bayesian networks (2005) (77)
- Evolution of the yeast protein interaction network (2003) (76)
- Evolutionary Persistence of Functional Compensation by Duplicate Genes in Arabidopsis (2009) (76)
- Expansion of hexose transporter genes was associated with the evolution of aerobic fermentation in yeasts. (2011) (76)
- Comparative methods for the analysis of gene-expression evolution: an example using yeast functional genomic data. (2005) (74)
- Gene expression evolves faster in narrowly than in broadly expressed mammalian genes. (2005) (72)
- Molecular Genetics of Spectral Tuning in New World Monkey Color Vision (1998) (71)
- Transcriptome dynamics of developing maize leaves and genomewide prediction of cis elements and their cognate transcription factors (2015) (69)
- Anatomical and transcriptional dynamics of maize embryonic leaves during seed germination (2013) (69)
- Genome-Wide Patterns of Genetic Variation in Two Domestic Chickens (2013) (69)
- Functional characterization of cellulases identified from the cow rumen fungus Neocallimastix patriciarum W5 by transcriptomic and secretomic analyses (2011) (68)
- A Gene Gravity Model for the Evolution of Cancer Genomes: A Study of 3,000 Cancer Genomes across 9 Cancer Types (2015) (67)
- Overlapping genes in the human and mouse genomes (2008) (67)
- Alternatively and constitutively spliced exons are subject to different evolutionary forces. (2006) (66)
- Understanding the origins of AIDS viruses (1988) (65)
- Mixed culture fermentation from lignocellulosic materials using thermophilic lignocellulose-degrading anaerobes (2011) (64)
- Genomic and transcriptomic analyses of the medicinal fungus Antrodia cinnamomea for its metabolite biosynthesis and sexual development (2014) (64)
- The rises and falls of opsin genes in 59 ray-finned fish genomes and their implications for environmental adaptation (2017) (64)
- Functional Compensation of Primary and Secondary Metabolites by Duplicate Genes in Arabidopsis thaliana (2010) (63)
- Human-specific insertions and deletions inferred from mammalian genome sequences. (2006) (63)
- A highly efficient β-glucosidase from the buffalo rumen fungus Neocallimastix patriciarum W5 (2012) (63)
- Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle (2006) (62)
- The genetic basis of evolutionary change in gene expression levels (2010) (61)
- DNA Polymorphism and Selection at the Melanocortin‐1 Receptor Gene in Normally Pigmented Southern African Individuals (2003) (61)
- Protein Under-Wrapping Causes Dosage Sensitivity and Decreases Gene Duplicability (2007) (59)
- External factors accelerate expression divergence between duplicate genes. (2007) (59)
- Genomic Organization, Transcriptomic Analysis, and Functional Characterization of Avian α- and β-Keratins in Diverse Feather Forms (2014) (58)
- Topographical mapping of α- and β-keratins on developing chicken skin integuments: Functional interaction and evolutionary perspectives (2015) (58)
- Directional mutational pressure affects the amino acid composition and hydrophobicity of proteins in bacteria (2004) (58)
- Ubiquitin genes as a paradigm of concerted evolution of tandem repeats (2005) (57)
- Comment on "Chromosomal Speciation and Molecular Divergence-Accelerated Evolution in Rearranged Chromosomes" (2003) (57)
- True navigation and magnetic maps in spiny lobsters (52)
- Effects of GC Content and Mutational Pressure on the Lengths of Exons and Coding Sequences (2003) (52)
- Identifying gene regulatory modules of heat shock response in yeast (2008) (51)
- Allelic Variation in the Squirrel Monkey X-Linked Color Vision Gene: Biogeographical and Behavioral Correlates (2002) (49)
- Features and trend of loss of promoter-associated CpG islands in the human and mouse genomes. (2007) (49)
- Comprehensive analysis of microRNAs in breast cancer (2012) (49)
- Evolution of 5' untranslated region length and gene expression reprogramming in yeasts. (2012) (49)
- Experimental Evolution of Yeast for High-Temperature Tolerance (2018) (49)
- Evolutionary conservation of histone modifications in mammals. (2012) (48)
- LIKELIHOOD ANALYSIS OF MITOCHONDRIAL RESTRICTION‐CLEAVAGE PATTERNS FOR THE HUMAN‐CHIMPANZEE‐GORILLA TRICHOTOMY (1987) (48)
- Metabolic engineering a yeast to produce astaxanthin. (2017) (48)
- Identifying a large number of high-yield genes in rice by pedigree analysis, whole-genome sequencing, and CRISPR-Cas9 gene knockout (2018) (48)
- Large-scale identification and functional analysis of NLR genes in blast resistance in the Tetep rice genome sequence (2019) (47)
- MicroRNA 3' end nucleotide modification patterns and arm selection preference in liver tissues (2012) (47)
- The prognostic significance of RUNX2 and miR-10a/10b and their inter-relationship in breast cancer (2014) (46)
- Human adaptive evolution at Myostatin (GDF8), a regulator of muscle growth. (2006) (46)
- How strong is the mutagenicity of recombination in mammals? (2005) (46)
- Integrating an algal β-carotene hydroxylase gene into a designed carotenoid-biosynthesis pathway increases carotenoid production in yeast. (2015) (46)
- Systematic identification of yeast cell cycle transcription factors using multiple data sources (2008) (46)
- Expression evolution in yeast genes of single-input modules is mainly due to changes in trans-acting factors. (2007) (45)
- The spatial distribution of cis regulatory elements in yeast promoters and its implications for transcriptional regulation (2010) (44)
- Comparison of three methods for estimating rates of synonymous and nonsynonymous nucleotide substitutions. (2004) (43)
- A general tendency for conservation of protein length across eukaryotic kingdoms. (2004) (43)
- Effect of Migration on Genetic Distance (1976) (43)
- PGASO: A synthetic biology tool for engineering a cellulolytic yeast (2012) (42)
- Large numbers of vertebrates began rapid population decline in the late 19th century (2016) (42)
- Reorganization of adjacent gene relationships in yeast genomes by whole-genome duplication and gene deletion. (2006) (42)
- Expression Divergence of Chemosensory Genes between Drosophila sechellia and Its Sibling Species and Its Implications for Host Shift (2015) (42)
- The genome and occlusion bodies of marine Penaeus monodon nudivirus (PmNV, also known as MBV and PemoNPV) suggest that it should be assigned to a new nudivirus genus that is distinct from the terrestrial nudiviruses (2014) (41)
- Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes (2019) (41)
- Metabolite profiles for Antrodia cinnamomea fruiting bodies harvested at different culture ages and from different wood substrates. (2011) (41)
- The molecular clock ticks regularly in muroid rodents and hamsters (1992) (41)
- DNA polymorphism in a worldwide sample of human X chromosomes. (2002) (40)
- Transcriptomes of Mouse Olfactory Epithelium Reveal Sexual Differences in Odorant Detection (2012) (40)
- Gene number expansion and contraction in vertebrate genomes with respect to invertebrate genomes. (2008) (40)
- Adverse interactions between micro-RNAs and target genes from different species (2010) (40)
- Constructing a yeast to express the largest cellulosome complex on the cell surface (2020) (39)
- SplitPocket: identification of protein functional surfaces and characterization of their spatial patterns (2009) (39)
- Patterns of Gene Duplication in Saccharomyces cerevisiae and Caenorhabditis elegans (2002) (39)
- A Novel puf-A Gene Predicted from Evolutionary Analysis Is Involved in the Development of Eyes and Primordial Germ-Cells (2009) (38)
- Gene clustering pattern, promoter architecture, and gene expression stability in eukaryotic genomes (2011) (38)
- Transcriptomic analyses of regenerating adult feathers in chicken (2015) (38)
- Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data (2007) (38)
- Codon-usage bias versus gene conversion in the evolution of yeast duplicate genes (2006) (38)
- Phosphorylated and nonphosphorylated serine and threonine residues evolve at different rates in mammals. (2010) (37)
- News & Views: The chimpanzee and us (2005) (36)
- Roles of trans and cis variation in yeast intraspecies evolution of gene expression. (2009) (36)
- Systematic screening of glycosylation- and trafficking-associated gene knockouts in Saccharomyces cerevisiae identifies mutants with improved heterologous exocellulase activity and host secretion (2013) (36)
- Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade (2017) (35)
- Dynamic modeling of cis-regulatory circuits and gene expression prediction via cross-gene identification (2005) (35)
- Multiple Regulatory Modules Are Required for Scale‐to‐Feather Conversion (2018) (34)
- Engineering the oleaginous red yeast Rhodotorula glutinis for simultaneous β-carotene and cellulase production (2018) (33)
- Gene Family Size Conservation Is a Good Indicator of Evolutionary Rates (2010) (33)
- Recombination has little effect on the rate of sequence divergence in pseudoautosomal boundary 1 among humans and great apes. (2003) (32)
- Detection of gene duplications and block duplications in eukaryotic genomes (2004) (32)
- Assembler for de novo assembly of large genomes (2013) (31)
- MYBS: a comprehensive web server for mining transcription factor binding sites in yeast (2007) (31)
- Classification of protein functional surfaces using structural characteristics (2012) (30)
- Higher Gene Duplicabilities for Metabolic Proteins Than for Nonmetabolic Proteins in Yeast and E. coli (2004) (30)
- STATISTICAL TESTS OF DNA PHYLOGENIES (1995) (30)
- Genetic and Molecular Basis of Feather Diversity in Birds (2018) (29)
- Whole genome transcriptome polymorphisms in Arabidopsis thaliana (2008) (29)
- Male-to-Female Ratios of Mutation Rate in Higher Primates Estimated from Intron Sequences (1996) (29)
- Increasing MicroRNA target prediction confidence by the relative R(2) method. (2009) (29)
- Nucleotide Variation and Haplotype Diversity in a 10-kb Noncoding Region in Three Continental Human Populations (2006) (28)
- The relationships among microRNA regulation, intrinsically disordered regions, and other indicators of protein evolutionary rate. (2011) (28)
- What is the Bootstrap Technique (1994) (28)
- Establishment of the metabolite profile for an Antrodia cinnamomea health food product and investigation of its chemoprevention activity. (2013) (28)
- Neutral mutation hypothesis test (1991) (27)
- Functional promiscuity of squirrel monkey growth hormone receptor toward both primate and nonprimate growth hormones. (2002) (27)
- Estimating the intensity of male-driven evolution in rodents by using X-linked and Y-linked Ube 1 genes and pseudogenes (2004) (27)
- Transcriptional profiling of adult Drosophila antennae by high-throughput sequencing (2013) (27)
- Elevated auxin biosynthesis and transport underlie high vein density in C4 leaves (2017) (26)
- MicroRNA-Like Small RNAs Prediction in the Development of Antrodia cinnamomea (2015) (26)
- Frequent gene conversion between human red and green opsin genes (1998) (25)
- Identification of protein functional surfaces by the concept of a split pocket (2009) (24)
- Discovering gapped binding sites of yeast transcription factors (2008) (23)
- Genome-wide prediction of CRISPR/Cas9 targets in Kluyveromyces marxianus and its application to obtain a stable haploid strain (2018) (23)
- fPOP: footprinting functional pockets of proteins by comparative spatial patterns (2009) (23)
- Radical amino acid change versus positive selection in the evolution of viral envelope proteins. (2006) (23)
- Development of cellulosic ethanol production process via co-culturing of artificial cellulosomal Bacillus and kefir yeast (2012) (23)
- Are GC-rich isochores vanishing in mammals? (2006) (23)
- Method for identifying transcription factor binding sites in yeast (2006) (23)
- Many human RNA viruses show extraordinarily stringent selective constraints on protein evolution (2019) (22)
- Unexpected Conservation of the X-Linked Color Vision Gene in Nocturnal Prosimians: Evidence from Two Bush Babies (1997) (22)
- Functional evolution of cardiac microRNAs in heart development and functions. (2014) (22)
- Coalescent theory and its application in population genetics (1999) (22)
- Contrasting rates of nucleotide substitution in the X-Linked and Y-Linked zinc finger genes (1994) (22)
- Identification of essential amino acid changes in paired domain evolution using a novel combination of evolutionary analysis and in vitro and in vivo studies. (2002) (22)
- Functional compensation by duplicated genes in mouse. (2009) (21)
- Dynamic association rules for gene expression data analysis (2015) (21)
- Maize and millet transcription factors annotated using comparative genomic and transcriptomic data (2014) (21)
- Genetically distinct coelacanth population off the northern Tanzanian coast (2011) (21)
- On the Robust Circuit Design Schemes of Biochemical Networks: Steady-State Approach (2007) (20)
- On the Adaptive Design Rules of Biochemical Networks in Evolution (2007) (20)
- ETOPE: evolutionary test of predicted exons (2003) (20)
- Sulfate Activation Enzymes: Phylogeny and Association with Pyrophosphatase (2008) (20)
- Frequency spectra of neutral and deleterious alleles in a finite population (1980) (19)
- Substitution rates in hepatitis delta virus (1995) (19)
- Fast evolution of core promoters in primate genomes. (2008) (18)
- Uncovering MicroRNA Regulatory Hubs that Modulate Plasma Cell Differentiation (2015) (18)
- Molecular Evolution of Genes (1987) (17)
- A thermo- and toxin-tolerant kefir yeast for biorefinery and biofuel production (2014) (17)
- Blast Fungal Genomes Show Frequent Chromosomal Changes, Gene Gains and Losses, and Effector Gene Turnover. (2019) (17)
- Protein complexity, gene duplicability and gene dispensability in the yeast genome. (2007) (17)
- Origin and Molecular Evolution of the X-linked Duplicate Color Vision Genes in Howler Monkeys (1997) (17)
- Molecular evolution of recombination hotspots and highly recombining pseudoautosomal regions in hominoids. (2005) (17)
- Identifying Primate ACE2 Variants That Confer Resistance to SARS-CoV-2 (2021) (15)
- Evolution of protein inhibitors of serine proteinases: Positive Darwinian selection or compositional effects? (2005) (15)
- Integrating RNA-seq and ChIP-seq data to characterize long non-coding RNAs in Drosophila melanogaster (2016) (15)
- GS-Aligner: a novel tool for aligning genomic sequences using bit-level operations. (2003) (15)
- News and views: the chimpanzee and us. (2005) (15)
- A systematic approach to detecting transcription factors in response to environmental stresses (2007) (15)
- Potential problems in estimating the male-to-female mutation rate ratio from DNA sequence data (1993) (15)
- Roles of cis- and trans-changes in the regulatory evolution of genes in the gluconeogenic pathway in yeast. (2008) (14)
- Sequences and Evolution of Human and Squirrel Monkey Blue Opsin Genes (1997) (13)
- Prediction of human miRNAs using tissue-selective motifs in 3′ UTRs (2008) (13)
- Behavioral and brain- transcriptomic synchronization between the two opponents of a fighting pair of the fish Betta splendens (2020) (13)
- Parallel evolution between aromatase and androgen receptor in the animal kingdom. (2009) (13)
- Regulatory Differences in Natal Down Development between Altricial Zebra Finch and Precocial Chicken. (2016) (12)
- Identifying Cis-Regulatory Changes Involved in the Evolution of Aerobic Fermentation in Yeasts (2013) (12)
- Developmental constraint on gene duplicability in fruit flies and nematodes. (2004) (12)
- Constructing a cellulosic yeast host with an efficient cellulase cocktail (2018) (12)
- Insights into the regulation of C4 leaf development from comparative transcriptomic analysis. (2016) (11)
- The evolution of aerobic fermentation in Schizosaccharomyces pombe was associated with regulatory reprogramming but not nucleosome reorganization. (2011) (11)
- Different age distribution patterns of human, nematode, and Arabidopsis duplicate genes. (2004) (11)
- Evolutionary approach to predicting the binding site residues of a protein from its primary sequence (2011) (11)
- Structure of Apolipoprotein B100 of Human Low Density Lipoproteins (2005) (11)
- A Statistical Test of Phylogenies Estimated from Sequence Data (1998) (11)
- Biomimetic strategy for constructing Clostridium thermocellum cellulosomal operons in Bacillus subtilis (2018) (11)
- Maize ANT1 modulates vascular development, chloroplast development, photosynthesis, and plant growth (2020) (10)
- Polymorphism and evolution of the Rh blood groups (1981) (10)
- Assembling the Setaria italica L. Beauv. genome into nine chromosomes and insights into regions affecting growth and drought tolerance (2016) (10)
- Stochastic models in population genetics (1977) (9)
- Identification and evolutionary analysis of long non-coding RNAs in zebra finch (2017) (9)
- Regulatory Divergence among Beta-Keratin Genes during Bird Evolution. (2016) (9)
- A simple method using PyrosequencingTM to identify de novo SNPs in pooled DNA samples (2010) (9)
- Patterns of internal gene duplication in the course of metazoan evolution. (2007) (9)
- Nucleotide Substitution: Rate of (2006) (8)
- Estimation of Population Parameters and Detection of Natural Selection from DNA Sequences (1994) (8)
- Apolipoprotein variation among different species (1991) (8)
- The Influence of Adjacent Nucleotides on the Pattern of Nucleotide Substitution in Mitochondrial Introns of Angiosperms (2002) (8)
- Improved variance estimators for one- and two-parameter models of nucleotide substitution. (2008) (8)
- Chromosomal-level genome assembly of the semi-dwarf rice Taichung Native 1, an initiator of Green Revolution. (2021) (7)
- Cloning and sequencing of bovine apolipoprotein E complementary DNA and molecular evolution of apolipoproteins E, C-I, and C-II (1991) (7)
- Omics Applications to Biofuel Research (2010) (6)
- Revealing the Anti-Tumor Effect of Artificial miRNA p-27-5p on Human Breast Carcinoma Cell Line T-47D (2012) (6)
- Constructing a human complex type N-linked glycosylation pathway in Kluyveromyces marxianus (2020) (6)
- Maize Golden2-like transcription factors boost rice chloroplast development, photosynthesis, and grain yield (2021) (6)
- Predicting the probability of H3K4me3 occupation at a base pair from the genome sequence context (2013) (6)
- Reconstructing a Network of Stress-Response Regulators via Dynamic System Modeling of Gene Regulation (2008) (6)
- Statistical models for studying DNA sequence evolution (1995) (6)
- GAMYB TF modulates bHLH142 and is homeostatically regulated by TDR TF during rice anther tapetal and pollen development. (2021) (5)
- Evolutionary Genetics of Primate Color Vision (2000) (5)
- Gains and Losses of Transcription Factor Binding Sites in Saccharomyces cerevisiae and Saccharomyces paradoxus (2015) (5)
- Whole-Genome Duplication Facilitated the Evolution of C4 Photosynthesis in Gynandropsis gynandra (2021) (5)
- Genomic Analysis of Mycobacterium tuberculosis Isolates and Construction of a Beijing Lineage Reference Genome (2020) (5)
- Three TF Co-expression Modules Regulate Pressure-Overload Cardiac Hypertrophy in Male Mice (2017) (5)
- A simulation study on Nei and Li's model for estimating DNA divergence from restriction enzyme maps (2005) (5)
- Feather Evolution from Precocial to Altricial Birds. (2019) (5)
- Dating the age of the last common ancestor of all living organisms with a protein clock (2002) (5)
- PSC: protein surface classification (2012) (4)
- Characterizing an engineered carotenoid-producing yeast as an anti-stress chassis for building cell factories (2019) (4)
- Correction for Ling et al., Extremely high genetic diversity in a single tumor points to prevalence of non-Darwinian cell evolution (2016) (4)
- Contribution of Transcription Factor Binding Site Motif Variants to Condition-Specific Gene Expression Patterns in Budding Yeast (2012) (4)
- Signaling Pathway for RKIP and Let-7 Regulates and Predicts Metastatic Breast Cancer (2011) (4)
- Patterns of gene deletion following genome duplication in yeast (2005) (4)
- Gene Trees and Species Trees (2006) (4)
- Archaebacterial or eocyte tree? (1990) (3)
- Predicting Transcription Factor Binding Sites and Their Cognate Transcription Factors Using Gene Expression Data. (2017) (3)
- Discovering unknown human and mouse transcription factor binding sites and their characteristics from ChIP-seq data (2021) (3)
- Domain Duplication and Gene Elongation (2006) (2)
- Stochastic Models in Population Genetics. (1977) (2)
- Total number of individuals affected by deleterious mutant genes in a finite population (1975) (2)
- Assessment of Compositional Heterogeneity Within and Between Eukaryotic Genomes (2000) (2)
- The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications (2005) (2)
- Regulators of early maize leaf development inferred from transcriptomes of laser capture microdissection (LCM)-isolated embryonic leaf cells (2022) (2)
- Historical profiling of maize duplicate genes sheds light on the evolution of C4 photosynthesis in grasses. (2013) (2)
- Palindrome Patterns in Genomes (2004) (1)
- GAMYB modulates bHLH142 and is homeostatically regulated by TDR during rice anther tapetal and pollen development (2020) (1)
- Variance of genetic distance and correlation of heterozygosity between populations under the pressure of stepwise mutation (1979) (1)
- Simultaneous detection of miRNA and mRNA at the single‐cell level in plant tissues (2022) (1)
- Comparative Genomics and Evolutionary Genetics of Yeast Carbon Metabolism (2014) (1)
- Tryptophan plays an important role in yeast’s tolerance to isobutanol (2021) (1)
- Episodic Molecular Evolution of Some Protein Hormones in Primates and Its Implications for Primate Adaptation (2007) (1)
- Trevolver: simulating non-reversible DNA sequence evolution in trinucleotide context on a bifurcating tree (2019) (1)
- Two genomic regions of a sodium azide induced rice mutant confer broad-spectrum and durable resistance to blast disease (2022) (1)
- Angiosperm origins: comment and reply (1989) (1)
- Effect of changes in population size on the correlation between mutation rate and heterozygosity (1979) (1)
- Evolution of Olfactory Receptor Genes in East Asian Loaches (2009) (1)
- Maximum Likelihood Estimation of Population Parameters (2002) (1)
- Retention of Cryptic Genes in Microbial Populations 1 (1998) (1)
- Yu, N. et al. Low nucleotide diversity in chimpanzees and bonobos. Genetics 164, 1511-1518 (2003) (1)
- correction: Chromosome-wide SNPs reveal an ancient origin for Plasmodium falciparum (2002) (1)
- Lactobacillus plantarum isolated from kefir enhances immune responses and survival of white shrimp (Penaeus vannamei) challenged with Vibrio alginolyticus. (2023) (1)
- Safety Assessment of 3S, 3’S Astaxanthin Derived from Metabolically Engineered K. marxianus (2022) (1)
- Homologous, Orthologous and Paralogous Genes (2006) (1)
- Advances in Biosignal Transduction (2017) (0)
- Palindrome-like Patterns in Genomes (2004) (0)
- GEMtf-Database of Time-course Expression Profiles of Maize Transcription Factors by Using Biclustering Algorithm (0)
- Structure and Evolution of the Apolipoprotein and Lipase Gene Families (1992) (0)
- Behavioral and neurotranscriptomic synchronization v1 (2019) (0)
- ESTIMATION OF THE NUMBERS OF SYNONYMOUS AND NONSYNONYMOUS SUBSTITUTIONS BETWEEN PROTEIN CODING GENES (1986) (0)
- Genomic signatures for the origin, adaptation and diversification of mangroves (2017) (0)
- Engineering the oleaginous red yeast Rhodotorula glutinis for simultaneous β-carotene and cellulase production (2018) (0)
- Auxin regulatory module evolution during C4 plant evolution (2016) (0)
- Macintosh-based computer Web-based primer design for single nucleotide polymorphism analysis (0)
- On the Inference of Regulatory Elements, Circuits, and Modules (2005) (0)
- Apolipoprotein A-Ii Gene Structure: Evolutionary Implications (1985) (0)
- Alignment of genomic sequences using bit-level operations. (2003) (0)
- Expression of Concern: Protein Under-Wrapping Causes Dosage Sensitivity and Decreases Gene Duplicability (2015) (0)
- Evolutionary change of restriction sites under unequal rates of nucleotide substitution among the three positions of codons (2005) (0)
- Gene Duplication: Evolution (2006) (0)
- Integrating RNA-seq and ChIP-seq data to characterize long non-coding RNAs in Drosophila melanogaster (2016) (0)
- Evolution of Glucagon Genes 1 (1998) (0)
- Mathematical properties of some measures of evolutionary distance. (2007) (0)
- Angiosperm origins (1989) (0)
- Books Received (2000) (0)
- Regulatory Differences in Natal Down Development between Altricial and Precocial Birds (2017) (0)
- Genome Assembly and Evolutionary Analysis of the Mandarin Duck Aix galericulata Reveal Strong Genome Conservation among Ducks (2022) (0)
- Transcriptomic analyses of regenerating adult feathers in chicken (2015) (0)
- Great Apes Divergence in Pseudoautosomal Boundary 1 Among Humans and Recombination Has Little Effect on the Rate of Sequence Material Supplemental (2003) (0)
- Chicken HOXC8 and HOXC10 genes may play a role in the altered skull morphology associated with the Crest phenotype. (2023) (0)
- Positive selection causes purifying selection (reply) (1982) (0)
- Adventures of a Mathematician in Evolutionary Biology (2021) (0)
- Cloning and Sequencing of Bovine Apolipoprotein A-I cDNA and Molecular Evolution of Apolipoproteins A-I and B-loo 1 Calm 0 ‘ h Uigin , * Lawrence Chart , * pt and (1998) (0)
- Molecular Evolution and the Phenotype@@@Molecular Evolution. (1997) (0)
- Genome-wide prediction of CRISPR/Cas9 targets in Kluyveromyces marxianus and its application to obtain a stable haploid strain (2018) (0)
- ly: biosynthesis, The apo ipoprotein multigene fam structure, structure-function relationships, and evolution (1988) (0)
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