Yasukazu Nakamura
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Computer Science
Yasukazu Nakamura's Degrees
- PhD Computer Science University of Tokyo
- Masters Computer Science University of Tokyo
- Bachelors Computer Science University of Tokyo
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(Suggest an Edit or Addition)Yasukazu Nakamura's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- The tomato genome sequence provides insights into fleshy fruit evolution (2012) (2615)
- Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions (supplement). (1996) (1917)
- Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions. (1996) (1638)
- Codon usage tabulated from international DNA sequence databases: status for the year 2000 (2000) (1227)
- Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases (2003) (1067)
- Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti. (2000) (870)
- Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110. (2002) (828)
- Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120. (2001) (707)
- Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome (2017) (684)
- Genome Structure of the Legume, Lotus japonicus (2008) (639)
- The International Nucleotide Sequence Database Collaboration (2010) (570)
- Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA. A primitive form of plant mitochondrial genome. (1992) (563)
- DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication (2017) (557)
- Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis. (2000) (556)
- Biochemical and genetic analysis of the effects of amylose-extender mutation in rice endosperm. (2001) (517)
- Complete structure of the chloroplast genome of Arabidopsis thaliana. (1999) (505)
- Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation (2014) (454)
- A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis. (2006) (391)
- The International Nucleotide Sequence Database Collaboration (2011) (381)
- Mapping of a gene responsible for the difference in amylopectin structure between japonica-type and indica-type rice varieties (2002) (374)
- Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1. (2002) (342)
- Monitoring of methyl jasmonate-responsive genes in Arabidopsis by cDNA macroarray: self-activation of jasmonic acid biosynthesis and crosstalk with other phytohormone signaling pathways. (2001) (300)
- Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids. (2003) (299)
- Complete Genomic Structure of the Bloom-forming Toxic Cyanobacterium Microcystis aeruginosa NIES-843 (2008) (257)
- The Sulfate Transporter SST1 Is Crucial for Symbiotic Nitrogen Fixation in Lotus japonicus Root Nodules (2005) (215)
- Role of the putative membrane-bound endo-1,4-beta-glucanase KORRIGAN in cell elongation and cellulose synthesis in Arabidopsis thaliana. (2001) (213)
- Expression Profiling-Based Identification of CO2-Responsive Genes Regulated by CCM1 Controlling a Carbon-Concentrating Mechanism in Chlamydomonas reinhardtii1 (2004) (209)
- Autoregulation of RNase III operon by mRNA processing. (1989) (190)
- Codon usage tabulated from the international DNA sequence databases (1997) (188)
- CyanoBase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. strain PCC6803 (1998) (184)
- CyanoBase: the cyanobacteria genome database update 2010 (2009) (183)
- A Large-scale Protein–protein Interaction Analysis in Synechocystis sp. PCC6803 (2007) (176)
- A Cluster of Genes Encodes the Two Types of Chalcone Isomerase Involved in the Biosynthesis of General Flavonoids and Legume-Specific 5-Deoxy(iso)flavonoids in Lotus japonicus 1 (2003) (174)
- A large scale structural analysis of cDNAs in a unicellular green alga, Chlamydomonas reinhardtii. I. Generation of 3433 non-redundant expressed sequence tags. (1999) (173)
- Generation of 10,154 expressed sequence tags from a leafy gametophyte of a marine red alga, Porphyra yezoensis. (2000) (170)
- Transient regulation of protein synthesis in Escherichia coli upon shift-up of growth temperature (1978) (170)
- The International Nucleotide Sequence Database Collaboration (2015) (167)
- Complete Genomic Structure of the Cultivated Rice Endophyte Azospirillum sp. B510 (2010) (162)
- DFAST and DAGA: web-based integrated genome annotation tools and resources (2016) (157)
- Gain-of-function phenotypes of chemically synthetic CLAVATA3/ESR-related (CLE) peptides in Arabidopsis thaliana and Oryza sativa. (2007) (153)
- A large scale analysis of cDNA in Arabidopsis thaliana: generation of 12,028 non-redundant expressed sequence tags from normalized and size-selected cDNA libraries. (2000) (153)
- Complete structure of the chloroplast genome of a legume, Lotus japonicus. (2000) (151)
- Comprehensive structural analysis of the genome of red clover (Trifolium pratense L.). (2005) (150)
- Structural analysis of a Lotus japonicus genome. I. Sequence features and mapping of fifty-six TAC clones which cover the 5.4 mb regions of the genome. (2001) (142)
- Conserved motifs in prokaryotic and eukaryotic polypeptide release factors: tRNA-protein mimicry hypothesis. (1996) (138)
- Characterization of the Soybean Genome Using EST-derived Microsatellite Markers (2008) (133)
- Identification of the prfC gene, which encodes peptide-chain-release factor 3 of Escherichia coli. (1994) (131)
- Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803. (2003) (128)
- Autocatalytic differentiation of epigenetic modifications within the Arabidopsis genome (2010) (127)
- Condon usage tabulated from the international DNA sequence databases (1996) (125)
- Generation of expressed sequence tags from low-CO2 and high-CO2 adapted cells of Chlamydomonas reinhardtii. (2000) (124)
- A rare tRNA-Arg(CCU) that regulates Ty1 element ribosomal frameshifting is essential for Ty1 retrotransposition in Saccharomyces cerevisiae. (1993) (122)
- The International Nucleotide Sequence Database Collaboration (2012) (120)
- Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. (2000) (114)
- The stretch of C-terminal acidic amino acids of translational release factor eRF1 is a primary binding site for eRF3 of fission yeast. (1998) (113)
- Development of a Bacterial Cell Enrichment Method and its Application to the Community Analysis in Soybean Stems (2009) (106)
- COMPARISON OF RNA EXPRESSION PROFILES BETWEEN THE TWO GENERATIONS OF PORPHYRA YEZOENSIS (RHODOPHYTA), BASED ON EXPRESSED SEQUENCE TAG FREQUENCY ANALYSIS (2003) (106)
- Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin (2019) (104)
- Arginine regulon of Escherichia coli K-12. A study of repressor-operator interactions and of in vitro binding affinities versus in vivo repression. (1992) (101)
- Host plant genome overcomes the lack of a bacterial gene for symbiotic nitrogen fixation (2009) (98)
- Codon usage tabulated from the international DNA sequence databases; its status 1999 (1999) (98)
- SNP Discovery and Linkage Map Construction in Cultivated Tomato (2010) (97)
- DDBJ launches a new archive database with analytical tools for next-generation sequence data (2009) (97)
- An interspecific linkage map of SSR and intronic polymorphism markers in tomato (2010) (97)
- Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. (2000) (94)
- Generation of 7137 non-redundant expressed sequence tags from a legume, Lotus japonicus. (2000) (93)
- Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti (supplement). (2000) (92)
- The integral membrane protein SEN1 is required for symbiotic nitrogen fixation in Lotus japonicus nodules. (2012) (92)
- CyanoBase: a large-scale update on its 20th anniversary (2016) (90)
- Genome-wide association study and genomic prediction in citrus: Potential of genomics-assisted breeding for fruit quality traits (2017) (88)
- Effects of rifampicin resistant rpoB mutations on antitermination and interaction with nusA in Escherichia coli. (1988) (83)
- C-terminal interaction of translational release factors eRF1 and eRF3 of fission yeast: G-domain uncoupled binding and the role of conserved amino acids. (1999) (82)
- A Large Scale Analysis of Protein–Protein Interactions in the Nitrogen-fixing Bacterium Mesorhizobium loti (2008) (82)
- DNA data bank of Japan (DDBJ) progress report (2015) (80)
- Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110 (supplement). (2002) (78)
- Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically assigned P1 clones. (1997) (77)
- Single amino acid substitution in prokaryote polypeptide release factor 2 permits it to terminate translation at all three stop codons. (1998) (75)
- DNA Data Bank of Japan (2016) (74)
- Characteristics of the Lotus Japonicus Gene Repertoire Deduced from Large-Scale Expressed Sequence Tag (EST) Analysis (2004) (71)
- DDBJ Read Annotation Pipeline: A Cloud Computing-Based Pipeline for High-Throughput Analysis of Next-Generation Sequencing Data (2013) (69)
- Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. (2006) (69)
- Conditionally lethal amber mutations in the leader peptidase gene of Escherichia coli (1989) (67)
- Functional specificity of amino acid at position 246 in the tRNA mimicry domain of bacterial release factor 2. (1996) (66)
- Gene clusters for ribosomal proteins in the mitochondrial genome of a liverwort, Marchantia polymorpha. (1992) (65)
- Comparison of the transcript profiles from the root and the nodulating root of the model legume Lotus japonicus by serial analysis of gene expression. (2005) (64)
- Genome Sequencing and Genome Resources in Model Legumes (2007) (63)
- Hybrid Origins of Citrus Varieties Inferred from DNA Marker Analysis of Nuclear and Organelle Genomes (2016) (62)
- CyanoBase and RhizoBase: databases of manually curated annotations for cyanobacterial and rhizobial genomes (2013) (61)
- Chromosomal location and structure of the operon encoding peptide-chain-release factor 2 of Escherichia coli. (1988) (60)
- Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence features of the regions of 1,381,565 bp covered by twenty one physically assigned P1 and TAC clones. (1998) (60)
- The nucleotide sequence of the cloned nusA gene and its flanking region of Escherichia coli. (1984) (60)
- Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids (supplement). (2003) (60)
- The genomic standards consortium: bringing standards to life for microbial ecology (2011) (59)
- DDBJ progress report (2010) (59)
- The DDBJ Japanese Genotype-phenotype Archive for genetic and phenotypic human data (2014) (59)
- Complete Genome Sequence of Bradyrhizobium sp. S23321: Insights into Symbiosis Evolution in Soil Oligotrophs (2012) (58)
- The Naming of Names: Guidelines for Gene Nomenclature in Marchantia (2015) (56)
- Codon usage tabulated from the international DNA sequence databases (1998) (55)
- Genome-wide analysis of intraspecific DNA polymorphism in 'Micro-Tom', a model cultivar of tomato (Solanum lycopersicum). (2014) (55)
- The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments (2011) (51)
- Sequence analysis of a 685-kb genomic region on chromosome 3p22-p21.3 that is homozygously deleted in a lung carcinoma cell line. (1997) (50)
- Conditionally lethal and recessive UGA-suppressor mutations in the prfB gene encoding peptide chain release factor 2 of Escherichia coli (1988) (48)
- Transfer RNA genes in the mitochondrial genome from a liverwort, Marchantia polymorpha: the absence of chloroplast-like tRNAs. (1992) (47)
- CyanoBase, the genome database for Synechocystis sp. strain PCC6803: status for the year 2000 (2000) (47)
- Nucleotide sequence of a cDNA encoding starch-branching enzyme, or q-enzyme I, from rice endosperm. (1992) (47)
- Structural analysis of a Lotus japonicus genome. II. Sequence features and mapping of sixty-five TAC clones which cover the 6.5-mb regions of the genome. (2002) (45)
- Group I introns in the liverwort mitochondrial genome: the gene coding for subunit 1 of cytochrome oxidase shares five intron positions with its fungal counterparts. (1993) (45)
- Regulatory defects of a conditionally lethal nusAts mutant of Escherichia coli. Positive and negative modulator roles of NusA protein in vivo. (1986) (45)
- Chromosomal location of a structural gene for the RNA polymerase sigma factor in Escherichia coli. (1977) (44)
- Construction of Signature-tagged Mutant Library in Mesorhizobium loti as a Powerful Tool for Functional Genomics (2008) (43)
- Draft Sequencing of the Heterozygous Diploid Genome of Satsuma (Citrus unshiu Marc.) Using a Hybrid Assembly Approach (2017) (43)
- DNA Data Bank of Japan: 30th anniversary (2017) (42)
- Multiple control of Escherichia coli lysyl-tRNA synthetase expression involves a transcriptional repressor and a translational enhancer element. (1993) (42)
- DDBJ progress report: a new submission system for leading to a correct annotation (2013) (42)
- OryzaGenome: Genome Diversity Database of Wild Oryza Species (2015) (41)
- Autogenous suppression of an opal mutation in the gene encoding peptide chain release factor 2. (1990) (41)
- Genome-wide Analyses of the Structural Gene Families Involved in the Legume-specific 5-Deoxyisoflavonoid Biosynthesis of Lotus japonicus (2007) (40)
- DDBJ new system and service refactoring (2012) (40)
- Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1 (supplement). (2002) (40)
- Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence features of the regions of 1,191,918 bp covered by seventeen physically assigned P1 clones. (1997) (39)
- In vivo evidence that the nusA and infB genes of E. coli are part of the same multi‐gene operon which encodes at least four proteins. (1985) (39)
- Complete genome sequence and analysis of Lactobacillus hokkaidonensis LOOC260T, a psychrotrophic lactic acid bacterium isolated from silage (2015) (39)
- Structural analysis of a Lotus japonicus genome. V. Sequence features and mapping of sixty-four TAC clones which cover the 6.4 mb regions of the genome. (2003) (38)
- Altered translation initiation factor 2 in the cold‐sensitive ssyG mutant affects protein export in Escherichia coli. (1986) (37)
- Toward richer metadata for microbial sequences: replacing strain-level NCBI taxonomy taxids with BioProject, BioSample and Assembly records (2014) (36)
- Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence features of the regions of 3,076,755 bp covered by sixty P1 and TAC clones. (2000) (35)
- Survey of the genetic information carried in the genome of Eucalyptus camaldulensis (2011) (35)
- The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium* (2010) (35)
- Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones. (2000) (34)
- Influence of Bacillus subtilis C-3102 on microbiota in a dynamic in vitro model of the gastrointestinal tract simulating human conditions. (2012) (34)
- Effect of NusA protein on expression of the nusA,infB operon in E. coli. (1985) (34)
- Suppression of temperature-sensitive defects of polypeptide release factors RF-1 and RF-2 by mutations or by an excess of RF-3 in Escherichia coli. (1996) (34)
- Escherichia coli release factor 3: resolving the paradox of a typical G protein structure and atypical function with guanine nucleotides. (1998) (34)
- Evidence for a positive regulation of RNA polymerase synthesis in Escherichia coli. (1975) (33)
- Gene organization of human NOTCH4 and (CTG)n polymorphism in this human counterpart gene of mouse proto-oncogene Int3. (1997) (33)
- Regulation of translation termination: conserved structural motifs in bacterial and eukaryotic polypeptide release factors. (1995) (33)
- Detection of genes in Escherichia coli sequences determined by genome projects and prediction of protein production levels, based on multivariate diversity in codon usage (1996) (32)
- Indirect regulation of translational termination efficiency at highly expressed genes and recoding sites by the factor recycling function of Escherichia coli release factor RF3 (1999) (32)
- Distinctive features of plant organs characterized by global analysis of gene expression in Arabidopsis. (2004) (32)
- Lactobacillus paragasseri sp. nov., a sister taxon of Lactobacillus gasseri, based on whole-genome sequence analyses. (2018) (31)
- Plant Genome DataBase Japan (PGDBj): A Portal Website for the Integration of Plant Genome-Related Databases (2014) (31)
- Ty element-induced temperature-sensitive mutations of Saccharomyces cerevisiae. (1992) (31)
- Extension of CyanoBase. CyanoMutants: repository of mutant information on Synechocystis sp. strain PCC6803 (1999) (31)
- Activation tagging approach in a model legume, Lotus japonicus (2005) (30)
- Sequence and functional analysis of mutations in the gene encoding peptide-chain-release factor 2 of Escherichia coli. (1991) (30)
- Regulation of basal level expression of the tryptophan operon of Escherichia coli. (1989) (30)
- Large-scale genome analysis of bovine commensal Escherichia coli reveals that bovine-adapted E. coli lineages are serving as evolutionary sources of the emergence of human intestinal pathogenic strains (2019) (28)
- Structural analysis of a Lotus japonicus genome. IV. Sequence features and mapping of seventy-three TAC clones which cover the 7.5 mb regions of the genome. (2003) (27)
- Loss of cytochrome cM stimulates cyanobacterial heterotrophic growth in the dark. (2015) (25)
- Establishment of publicly available cDNA material and information resource of Chlamydomonas reinhardtii (Chlorophyta) to facilitate gene function analysis (2004) (25)
- E. coli NusA protein binds in vitro to an RNA sequence immediately upstream of the boxA signal of bacteriophage lambda. (1985) (25)
- Loss of overproduction of polypeptide release factor 3 influences expression of the tryptophanase operon of Escherichia coli (1996) (24)
- Human pseudoautosomal boundary-like sequences: expression and involvement in evolutionary formation of the present-day pseudoautosomal boundary of human sex chromosomes. (1996) (24)
- Genetic interaction between the beta' subunit of RNA polymerase and the arginine-rich domain of Escherichia coli nusA protein (1991) (24)
- Induction of sigma factor synthesis in Escherichia coli by the N gene product of bacteriophage lambda. (1976) (24)
- Codon-anticodon assignment and detection of codon usage trends in seven microbial genomes. (1997) (24)
- The sugary-type isoamylase gene from rice and Aegilops tauschii: characterization and comparison with maize and arabidopsis. (2003) (23)
- Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence features of the regions of 1,044,062 bp covered by thirteen physically assigned P1 clones. (1997) (23)
- nusA amber mutation that causes temperature-sensitive growth of Escherichia coli (1988) (23)
- Commonalities and Differences among Symbiosis Islands of Three Mesorhizobium loti Strains (2013) (22)
- The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications (2011) (22)
- Structural analysis of a Lotus japonicus genome. III. Sequence features and mapping of sixty-two TAC clones which cover the 6.7 Mb regions of the genome. (2003) (21)
- Glutamine synthetase gene expression at elevated hydrostatic pressure in a deep-sea piezophilic Shewanella violacea. (2000) (21)
- Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools. (2016) (20)
- Transient Regulation ofProtein Synthesis inEscherichia coli UponShift-Up ofGrowthTemperature (1978) (20)
- Regulation of lrp gene expression by H-NS and Lrp proteins in Escherichia coli: dominant negative mutations in lrp. (1995) (20)
- Functional mapping of ribosome-contact sites in the ribosome recycling factor: a structural view from a tRNA mimic. (2001) (20)
- Sequences of the genes encoding argininosuccinate synthetase in Escherichia coli and Saccharomyces cerevisiae: comparison with methanogenic archaebacteria and mammals. (1990) (19)
- Differential regulation of two genes encoding lysyl‐tRNA synthetases in Escherichia coli: lysU‐constitutive mutations compensate for a lysS null mutation (1992) (19)
- Characterization of a 1200-kb genomic segment of chromosome 3p22-p21.3. (1999) (19)
- Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones. (1998) (19)
- High pressure represses expression of the malB operon in Escherichia coli. (1996) (19)
- Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence features of the regions of 1,456,315 bp covered by nineteen physically assigned P1 and TAC clones. (1998) (19)
- Expression Profiling-Based Identification of CO 2 -Responsive Genes Regulated by CCM1 Controlling a Carbon-Concentrating Mechanism in Chlamydomonas reinhardtii (2004) (18)
- Promoter trapping in Lotus japonicus reveals novel root and nodule GUS expression domains. (2005) (18)
- Growth complementation of influenza virus temperature-sensitive mutants in mouse cells which express the RNA polymerase and nucleoprotein genes. (1991) (18)
- Mudi, a web tool for identifying mutations by bioinformatics analysis of whole‐genome sequence (2014) (17)
- Localization of the structural gene for the ' subunit of RNA polymerase in Escherichia coli. (1973) (17)
- Regulation of lysyl-tRNA synthetase expression by histone-like protein H-NS of Escherichia coli (1994) (16)
- Comparative characterization of release factor RF-3 genes of Escherichia coli, Salmonella typhimurium, and Dichelobacter nodosus (1995) (16)
- Comprehensive cloning of Schizosaccharomyces pombe genes encoding translation elongation factors. (1997) (16)
- Structural analysis of Arabidopsis thaliana chromosome 5. IX. Sequence features of the regions of 1,011,550 bp covered by seventeen P1 and TAC clones. (1999) (15)
- Potential of Oryza officinalis to augment the cold tolerance genetic mechanisms of Oryza sativa by network complementation (2018) (15)
- SecY, a multispanning integral membrane protein, contains a potential leader peptidase cleavage site (1990) (14)
- Complete Genome Sequence of Bifidobacterium longum 105-A, a Strain with High Transformation Efficiency (2014) (14)
- Genome-wide expression-monitoring of jasmonate-responsive genes of Arabidopsis using cDNA arrays. (2000) (14)
- Genomic DNA sequence of a rice gene coding for a pullulanase-type of starch debranching enzyme. (1998) (13)
- Molecular cloning and sequence of theBacillus stearothermophilus translational initiation factor IF2 gene (1986) (13)
- A genomic approach to selecting robust and versatile SNP sets from next-generation sequencing data for genome-wide association study in citrus cultivars (2016) (12)
- Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering. (2016) (12)
- Biological databases at DNA Data Bank of Japan in the era of next-generation sequencing technologies. (2010) (12)
- Analysis of gene expression in Arabidopsis thaliana by array hybridization with genomic DNA fragments aligned along chromosomal regions. (2002) (12)
- Complete Genome Sequence of Aurantimicrobium minutum Type Strain KNCT, a Planktonic Ultramicrobacterium Isolated from River Water (2016) (11)
- Genome sequence and overview of Oligoflexus tunisiensis Shr3T in the eighth class Oligoflexia of the phylum Proteobacteria (2016) (11)
- Linkage localization of the starch branching enzyme I (Q-enzyme I) gene in rice (1994) (11)
- Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence features of the regions of 1,013,767 bp covered by sixteen physically assigned P1 and TAC clones. (1998) (11)
- SABRE2: a database connecting plant EST/full-length cDNA clones with Arabidopsis information. (2014) (10)
- Utility of mitochondrial‐encoded cytochrome c oxidase I gene for phylogenetic analysis and species identification of the planktonic diatom genus Skeletonema (2017) (10)
- Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence features of the regions of 1,367,185 bp covered by 19 physically assigned P1 and TAC clones. (1998) (10)
- Evidence for autoregulation of the nusA-infB operon of Escherichia coli. (1985) (10)
- Draft Genome Sequence of Weissella oryzae SG25T, Isolated from Fermented Rice Grains (2014) (10)
- Properties of peptide chain release factor 2 from Streptomyces coelicolor A3(2): conserved primary structure but no frameshift regulation (1995) (10)
- Cloning and overexpression of polypeptide release factor 1 of Thermus thermophilus. (1997) (10)
- Corrigendum: Biased biological functions of horizontally transfered genes in prokaryotic genomes (2004) (9)
- Plant Genome DataBase Japan (PGDBj). (2017) (9)
- Localization of nusA-suppressing amino acid substitutions in the conserved regions of the beta' subunit of Escherichia coli RNA polymerase. (1996) (9)
- Gene encoding a putative zinc finger protein in Synechocystis PCC6803. (1991) (8)
- Sll0939 is induced by Slr0967 in the cyanobacterium Synechocystis sp. PCC6803 and is essential for growth under various stress conditions. (2014) (8)
- Complete Genome Sequence of Cyanobacterium Leptolyngbya sp. NIES-3755 (2016) (7)
- Complete nucleotide sequence of the mitochondrial DNA from a liverwort,Marchantia polymorpha (1992) (7)
- Generating Publication-Ready Prokaryotic Genome Annotations with DFAST. (2019) (7)
- Draft Genome Sequence of the Nitrogen-Fixing and Hormogonia-Inducing Cyanobacterium Nostoc cycadae Strain WK-1, Isolated from the Coralloid Roots of Cycas revoluta (2018) (6)
- [System for expressed sequence tags (EST) analysis]. (2004) (6)
- Lactobacillus salitolerans sp. nov., a novel lactic acid bacterium isolated from spent mushroom substrates. (2019) (6)
- Localization ofnusA-suppressing amino acid substitutions in the conserved regions of theβ′ subunit ofEscherichia coli RNA polymerase (1996) (6)
- Effect of a bifunctional imidoester on dissociation of 70S ribosomes in Escherichia coli. (1973) (6)
- Genome Structure of the Cyanobacterium Synechocystis sp. (1996) (6)
- OryzaGenome2.1: Database of Diverse Genotypes in Wild Oryza Species (2021) (6)
- AnAms1.0: A high-quality chromosome-scale assembly of a domestic cat Felis catus of American Shorthair breed (2020) (5)
- Reclassification of Clostridium diolis Biebl and Spröer 2003 as a later heterotypic synonym of Clostridium beijerinckii Donker 1926 (Approved Lists 1980) emend. Keis et al. 2001. (2020) (5)
- Lactobacillus buchneri subsp. silagei subsp. nov., isolated from rice grain silage. (2020) (5)
- Evolution of Organellar Genomes (1991) (5)
- Escherichia coli proteins involved in regulation of transcription termination: function, structure, and expression of the nusA and nusB genes. (1986) (5)
- Monitoring of 12-oxo-Phytodienoic Acid (OPDA)-Induced Expression Changes in Arabidopsis by cDNA Macroarray (2003) (5)
- Overexpression and purification of recombinant eRF1 proteins of rabbit and Tetrahymena thermophila. (1999) (5)
- Molecular cloning and sequence of the Bacillus stearothermophilus translational initiation factor IF 2 gene (5)
- H2DB: a heritability database across multiple species by annotating trait-associated genomic loci (2012) (4)
- Repeated translocation of a supergene underlying rapid sex chromosome turnover in Takifugu pufferfish (2021) (4)
- The Arabidopsis TAC Position Viewer: a high-resolution map of transformation-competent artificial chromosome (TAC) clones aligned with the Arabidopsis thaliana Columbia-0 genome. (2015) (4)
- Complete sequence and structure of the genome of the harmful algal bloom-forming cyanobacterium Planktothrix agardhii NIES-204T and detailed analysis of secondary metabolite gene clusters. (2020) (4)
- Reclassification of Paenibacillus thermophilus Zhou et al. 2013 as a later heterotypic synonym of Paenibacillus macerans (Schardinger 1905) Ash et al. 1994. (2019) (3)
- A large scale genome analysis of Lotus japonicus (2001) (3)
- Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade (2021) (3)
- Complete Genome Sequence of a Coastal Cyanobacterium, Synechococcus sp. Strain NIES-970 (2017) (3)
- Complete genome structure of Mesorhizobium loti strain MAFF303099. (2002) (3)
- 2 . 10 Evolution of Organellar Genomes (3)
- CyanoBase: The Genome Database for Synechocystis sp. strain PCC6803 (1996) (2)
- Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Workshop at the Pacific Symposium on Biocomputing 2010 (2010) (2)
- Murine monoclonal antibodies which recognize active sites of Escherichia coli NusA protein and epitope mapping by gene fusion. (1989) (2)
- Fop (frequency of optimal codon usage): WWW service with its distribution analysis (1995) (2)
- A model for the domestication and diversification processes of modern citrus cultivars in Japan (2018) (2)
- Mitochondrial genome of Garcinia mangostana L. variety Mesta (2022) (2)
- [The model legume Lotus japonicus]. (2002) (2)
- Genome evolution of a non-parasitic secondary heterotroph, the diatom Nitzschia putrida (2021) (2)
- Overproduction and purification of lysyl-tRNA synthetase encoded by the herC gene of E coli. (1992) (2)
- LARGE SCALE cDNA SEQUENCING OF Arabidopsis thaliana (1999) (2)
- DNApod: DNA polymorphism annotation database from next-generation sequence read archives (2017) (2)
- DDBJ Sequence Read Archive / DDBJ Omics Archive (2010) (2)
- Estimation of Protein-production levels in Escherichia coli Genes on the basis of Multivariate Diversity in Codon Usage (1995) (1)
- Genome-wide association study and genomic prediction in citrus: Potential of genomics-assisted breeding for fruit quality traits (2017) (1)
- Structural and Comparative Genome Analysis of Lotus japonicus (2008) (1)
- Progress in Lotus japonicus genome sequencing project (2003) (1)
- Estimation of protein-production levels for ORFs found by E. coli and yeast genome projects, basing on levels of "optimal codon" usage, in connection with feasibility of their protein coding ability and with assignment to foreign-type genes (1994) (1)
- A High-throughput Gene Discovery System for Arabidopsis Genome Sequencing Project (1999) (1)
- Plant and Cell Physiology's 2018 Database Issue and Beyond. (2018) (1)
- Global Gene Expression Analysis of the Lotus japonicus Nodulation Process by SAGE, and Generation of Novel 3' cDNA Fragments (2003) (1)
- Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri (2017) (1)
- Evolutionary molecular engineering in Japan (1996) (1)
- Sequence analysis of a total of three megabases of DNA in two regions of chromosome 8p. (1999) (1)
- Annotation and Presentation Systems for Arabidopsis Genome Sequencing Project at Kazusa DNA Research Institute (1998) (1)
- Large-Scale Sequence Analyses in the Arabidopsis thaliana Genome Sequencing Project: Status 2000 (2000) (1)
- Whole-exome sequencing of 79 xenografts as a potential approach for the identification of genetic variants associated with sensitivity to cytotoxic anticancer drugs (2020) (1)
- Genome Sequence of a Rubber tree Hevea brasiliensis (2014) (1)
- Draft Genome Sequence of Lactobacillus oryzae Strain SG293T (2014) (1)
- Chapter 13 - Mutagenesis and transformation of starch biosynthesis of rice and the production of novel starches (2014) (1)
- Methods for analyzing next-generation sequencing data: VIII. Post-assembly analysis (2016) (0)
- GENOME WIDE EXPRESSION MONITORING OF JASMONATE-RESPONSIVE GENES OF ARABIDOPSIS USING cDNA MACROARRAY REVEALED SELF-ACTIVATION OF A SERIES OF JASMONATE BIOSYNTHESIS GENES AND CRPSS TALK WITH OTHER SIGNALING PATHWAYS (2001) (0)
- Significant differences in the frequency of transcriptional units, types and numbers of repetitive elements, GC content, and the number of CpG islands between a 1010-kb G-band genomic segment on chromosome 9q31.3 and a 1200-kb R-band genomic segment on chromosome 3p21.3. (1999) (0)
- Insights into Land Plant Evolution Garnered from the <em>Marchantia polymorpha</em> Genome (2019) (0)
- THE Arabidopsis GENOME PROJECT III. SEQUENCE ANALYSIS OF CHROMOSOME III AND V (1998) (0)
- Comprehensive gene expression analysis of ARABIDOPSIS 5th chromosome long arm region by genome DNA array (2001) (0)
- Genome Analysis of a Flowering Plant, Arabidopsis thaliana (2003) (0)
- Plant and Cell Physiology's 2018 Database Issue and Beyond. (2018) (0)
- CyanoBase and RhizoBase: enhancements and current status 2003 (2003) (0)
- P265 Essential role of Card9 in innate IFN-γ production and Th17 differentiation in the host defense against cryptococcal infection (2013) (0)
- GENOME SEQUENCE ANALYSIS OF CYANOBACTERIA, Anabaena sp. PCC7120,"Synechococcus elongatus" Toray, Gloeobacter violaceus PCC7421 (2001) (0)
- FROM A SITE OF HIGH-THROUGHPUT GENOME SEQUENCE ANALYSES OF PHOTOAUTOTROPHIC AND RELATED ORGANISMS (2001) (0)
- LARGE-SCALE STRUCTURAL ANALYSIS OF cDNAs IN MODEL PLANT SPECIES (2001) (0)
- 1 Establishment of a Tea Custom Array Based on EST Data Obtained with Next-generation Sequencing (2014) (0)
- ANALYSIS FOR GIANT GC CONTENT MOSAIC DOMAINS AND ITS BOUNDARIES IN THE HUMAN GENOME (1995) (0)
- A sensitive and efficient homology search method to find proteincoding regions using "protein-coding region DNA database" (1993) (0)
- [Genome analysis and resource development of Lotus japonicus]. (2006) (0)
- CELL WALL ANALYSIS OF TEMPERATURE SENSITIVE MUTANT acwl OF A. thaliana (1999) (0)
- NCBI will no longer make taxonomy identifiers for individual influenza strains on January 15, 2018 (2017) (0)
- Genome sequence and overview of Oligoflexus tunisiensis Shr3T in the eighth class Oligoflexia of the phylum Proteobacteria (2016) (0)
- The Arabidopsis Genome Project; Current Status of Sequencing and Re-annotation (2000) (0)
- GENOME ANALYSIS OF A FILAMENTOUS CYANOBACTERIUM, Anabaena sp. PCC7120 (2000) (0)
- Genes of terrestrial cyanobacteria which are expected to be useful in space environments. (2018) (0)
- Methods for analyzing next-generation sequencing data X. Registration to DDBJ through Mass Submission System (2017) (0)
- Structural and Functional Genome Analysis of Lotus japonicus and Mesorhizobium loti (2005) (0)
- Arabidopsis GENOME SEQUENCING PROJECT I. PHYSICAL MAP CONSTRUCTION AND DNA SEQUENCING STRATEGY (1997) (0)
- Towards a Unified Genome Database of Nitrogen Fixation and Photosynthesis Organisms (2001) (0)
- PROGRESS IN Arabidopsis thaliana GENOME SEQUENCING PROJECT (1999) (0)
- GENOME-WIDE EXPRESSION MONITORING OF JASMONATE-RESPONSIVE GENES OF ARABIDOPSIS USING A cDNA ARRAY (2000) (0)
- DNApod: Implementation of Virtual Machine for DNApod Workflow and Genotype Imputation (2016) (0)
- Methods for analyzing next-generation sequencing data IX.Genome annotation, visualization, and registration to DDBJ (2017) (0)
- 2-OXOGLUTARATE-DEPENDENT DIOXYGENASES INVOLVED IN FLAVONOL SYNTHESIS IN LOTUS JAPONICUS (2006) (0)
- Assessment of Species-specific Diversity of Genes in Codon Usage (1995) (0)
- EST analyses of Arabidopsis thaliana, Lotus japonicus, Chlamydomonas reinhardtii, and Porphyra yezoensis (2000) (0)
- ENTIRE GENETIC INFORMATION IN Synechocystis sp.strain PCC6803 GENOME (1997) (0)
- Arabidopsis genome sequencing project II. Construction of Arabidopsis thaliana genome data opening system (1997) (0)
- Genome-Wide Analysis of Intraspecific DNA Polymorphism in ‘Micro-Tom’, a Model Cultivar of Tomato ( Solanum lycopersicum ) (2014) (0)
- [Strategies for structural anaysis of genomes]. (2004) (0)
- DNA array technology and gene expression analysis in Arabidopsis thaliana (2000) (0)
- Overexpression and purification of polypeptide release factor eRF1 of Tetrahymena thermophila (1998) (0)
- Gain-of-function phenotypes of chemically synthetic CLAVATA3/ESR-related (CLE) peptides in Arabidopsis thaliana and Oryza sativa (Plant and Cell Physiology 48 12, (1821-1825)) (2008) (0)
- A MEMBRANE-BOUND ENDO-1,4-β-GLUCANASE IS REQUIRED FOR CELLULOSE BIOSYNTHESIS IN ARABIDOPSIS : (2001) (0)
- Draft genome sequence analysis of the extreme environment grown cyanobacterium, Nostoc sp. HK-01 (NIES-2109) (2017) (0)
- DDBJ Data Analysis Challenge: a machine learning competition to predict Arabidopsis chromatin feature annotations from DNA sequences. (2020) (0)
- CONSTRUCTION OF A GENOME INFORMATION PRESENTATION SYSTEM : Arabidopsis Genome Displayer (1999) (0)
- KusakiDB v1.0: a novel approach for validation and completeness of protein orthologous groups (2020) (0)
- Insights into nodule physiology and metabolism from transcriptomics, metabolomics, bioinformatics, and genetics (2006) (0)
- CHARACTERIZATION OF HUMAN PSEUDOAUTOSOMAL BOUNDARY-LIKE SEQUENCES (PABLS) FOUND NEAR THE BOUNDARY OF LONG-RANGE G+C% MOSAIC DOMAINS IN THE HUMAN GENOME (1995) (0)
- DEVELOPMENT AND UTILIZATION OF HIGH DENSITY GENE FILTER OF Synechocystis sp. PCC6803 GENOME (1999) (0)
- DEVELOPMENT OF HIGH DENSITY GENE FILTER OF Synechocystis sp. PCC6803 GENOME (1998) (0)
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What Schools Are Affiliated With Yasukazu Nakamura?
Yasukazu Nakamura is affiliated with the following schools:
