Yuji Nagata

Q: What Schools Are Affiliated With Yuji Nagata

Yuji Nagata is affiliated with the following schools: Tohoku University, Kyushu University, University of Tokyo, Kyoto University

Yuji Nagata's AcademicInfluence.com Rankings

Yuji Nagata

Physics

#8922

World Rank

#11246

Historical Rank

Particle Physics

#481

World Rank

#503

Historical Rank

physics Degrees

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Physics

Yuji Nagata's Degrees

PhD Physics University of Tokyo
Masters Physics University of Tokyo
Bachelors Physics University of Tokyo

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Yuji Nagata's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Design and Experimental Application of a Novel Non-Degenerate Universal Primer Set that Amplifies Prokaryotic 16S rRNA Genes with a Low Possibility to Amplify Eukaryotic rRNA Genes (2013) (310)
Redesigning dehalogenase access tunnels as a strategy for degrading an anthropogenic substrate. (2009) (242)
GenomeMatcher: A graphical user interface for DNA sequence comparison (2008) (214)
Aerobic degradation of lindane (γ-hexachlorocyclohexane) in bacteria and its biochemical and molecular basis (2007) (180)
Complete analysis of genes and enzymes for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26 (1999) (175)
Molecular cloning of a Pseudomonas paucimobilis gene encoding a 17-kilodalton polypeptide that eliminates HCl molecules from gamma-hexachlorocyclohexane (1991) (159)
Cloning and sequencing of a dehalogenase gene encoding an enzyme with hydrolase activity involved in the degradation of gamma-hexachlorocyclohexane in Pseudomonas paucimobilis (1993) (154)
Purification and characterization of a haloalkane dehalogenase of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26 (1997) (138)
Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26. (2000) (122)
Modification of Activity and Specificity of Haloalkane Dehalogenase from Sphingomonas paucimobilis UT26 by Engineering of Its Entrance Tunnel* (2003) (118)
Complete Genome Sequence of Acidovorax sp. Strain KKS102, a Polychlorinated-Biphenyl Degrader (2012) (116)
Cloning and Sequencing of a Novel meta-Cleavage Dioxygenase Gene Whose Product Is Involved in Degradation of γ-Hexachlorocyclohexane in Sphingomonas paucimobilis (1999) (106)
Strategies for bioremediation of polychlorinated biphenyls (2004) (105)
Cloning and Sequencing of a 2,5-Dichlorohydroquinone Reductive Dehalogenase Gene Whose Product Is Involved in Degradation of γ-Hexachlorocyclohexane by Sphingomonas paucimobilis (1998) (103)
Isolation and characterization of naphthalene-catabolic genes and plasmids from oil-contaminated soil by using two cultivation-independent approaches (2007) (101)
Enantioselectivity of haloalkane dehalogenases and its modulation by surface loop engineering. (2010) (99)
Nucleotide sequence and functional analysis of the meta-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102 (1994) (97)
Cloning and sequencing of a 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase gene involved in the degradation of gamma-hexachlorocyclohexane in Pseudomonas paucimobilis (1994) (95)
Two Different Types of Dehalogenases, LinA and LinB, Involved in γ-Hexachlorocyclohexane Degradation inSphingomonas paucimobilis UT26 Are Localized in the Periplasmic Space without Molecular Processing (1999) (91)
Dehydrochlorination of γ-Hexachlorocyclohexane (γ-BHC) by γ-BHC-Assimilating Pseudomonas paucimobilis (1989) (85)
Crystal structure of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 at 0.95 A resolution: dynamics of catalytic residues. (2004) (82)
Catalytic Mechanism of the Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26* (2003) (76)
Identification of the bphA and bphB genes of Pseudomonas sp. strains KKS102 involved in degradation of biphenyl and polychlorinated biphenyls. (1994) (73)
PcpA, which is involved in the degradation of pentachlorophenol in Sphingomonas chlorophenolica ATCC39723, is a novel type of ring‐cleavage dioxygenase (1999) (70)
Two Rhizobial Strains, Mesorhizobium loti MAFF303099 and Bradyrhizobium japonicum USDA110, Encode Haloalkane Dehalogenases with Novel Structures and Substrate Specificities (2005) (69)
Degradation of β-Hexachlorocyclohexane by Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26 (2005) (69)
Purification and Characterization of γ-Hexachlorocyclohexane (γ-HCH) Dehydrochlorinase (LinA) from Pseudomonas paucimobilis (1993) (68)
Reaction Mechanism and Stereochemistry of γ-Hexachlorocyclohexane Dehydrochlorinase LinA* (2001) (68)
Identification and Characterization of Genes Involved in the Downstream Degradation Pathway of γ-Hexachlorocyclohexane in Sphingomonas paucimobilis UT26 (2005) (67)
Halide-stabilizing residues of haloalkane dehalogenases studied by quantum mechanic calculations and site-directed mutagenesis. (2002) (62)
Quantitative analysis of substrate specificity of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26. (2005) (61)
Identification of the bphA4 gene encoding ferredoxin reductase involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102 (1994) (58)
Cloning and Characterization of linR, Involved in Regulation of the Downstream Pathway for γ-Hexachlorocyclohexane Degradation in Sphingomonas paucimobilis UT26 (2002) (58)
Complete Genome Sequence of the Representative γ-Hexachlorocyclohexane-Degrading Bacterium Sphingobium japonicum UT26 (2010) (56)
Aerobic mineralization of γ-HCH by Pseudomonas paucimobilis UT26 (1993) (56)
High-Temperature-Induced Transposition of Insertion Elements in Burkholderia multivorans ATCC 17616 (2005) (55)
BphS, a Key Transcriptional Regulator of bph Genes Involved in Polychlorinated Biphenyl/Biphenyl Degradation inPseudomonas sp. KKS102* (2001) (54)
Expression of the bph genes involved in biphenyl/PCB degradation in Pseudomonas sp. KKS102 induced by the biphenyl degradation intermediate, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. (2000) (53)
Degradation of β-hexachlorocyclohexane by haloalkane dehalogenase LinB from γ-hexachlorocyclohexane-utilizing bacterium Sphingobium sp. MI1205 (2007) (53)
Complete Nucleotide Sequence of an Exogenously Isolated Plasmid, pLB1, Involved in γ-Hexachlorocyclohexane Degradation (2006) (51)
Cloning, Biochemical Properties, and Distribution of Mycobacterial Haloalkane Dehalogenases (2005) (50)
Structure–specificity relationships for haloalkane dehalogenases (2001) (50)
Identification of a response regulator gene for catabolite control from a PCB‐degrading β‐proteobacteria, Acidovorax sp. KKS102 (2006) (50)
Haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26: X-ray crystallographic studies of dehalogenation of brominated substrates. (2003) (47)
Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium. (2011) (46)
Isolation of oxygenase genes for indigo-forming activity from an artificially polluted soil metagenome by functional screening using Pseudomonas putida strains as hosts (2015) (45)
Identification and Characterization of Genes Encoding a Putative ABC-Type Transporter Essential for Utilization of γ-Hexachlorocyclohexane in Sphingobium japonicum UT26 (2007) (45)
Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition. (2002) (44)
Identification of protein fold and catalytic residues of γ‐hexachlorocyclohexane dehydrochlorinase LinA (2001) (43)
Construction of Signature-tagged Mutant Library in Mesorhizobium loti as a Powerful Tool for Functional Genomics (2008) (43)
Construction and characterization of histidine-tagged haloalkane dehalogenase (LinB) of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26. (1999) (43)
Complete Nucleotide Sequence of TOL Plasmid pDK1 Provides Evidence for Evolutionary History of IncP-7 Catabolic Plasmids (2010) (42)
Identification of the catalytic triad in the haloalkane dehalogenase from Sphingomonas paucimobilis UT26 (1999) (42)
Isolation and characterization of acetoacetyl-CoA thiolase gene essential for n-decane assimilation in yeast Yarrowia lipolytica. (2001) (41)
Properties and biotechnological applications of natural and engineered haloalkane dehalogenases (2015) (40)
Crystal structure of γ-hexachlorocyclohexane Dehydrochlorinase LinA from Sphingobium japonicum UT26. (2010) (39)
Analysis of extracellular alginate lyase and its gene from a marine bacterial strain, Pseudoalteromonas atlantica AR06 (2010) (38)
Complete sequence determination combined with analysis of transposition/site-specific recombination events to explain genetic organization of IncP-7 TOL plasmid pWW53 and related mobile genetic elements. (2007) (38)
Pleiotropic roles of iron-responsive transcriptional regulator Fur in Burkholderia multivorans. (2008) (38)
Conjugal Transfer of Polychlorinated Biphenyl/Biphenyl Degradation Genes in Acidovorax sp. Strain KKS102, Which Are Located on an Integrative and Conjugative Element (2012) (36)
Functional Analysis of Unique Class II Insertion Sequence IS1071 (2006) (34)
Distribution of gamma-hexachlorocyclohexane-degrading genes on three replicons in Sphingobium japonicum UT26. (2006) (34)
Isolation and characterization of Tn5-induced mutants of Pseudomonas paucimobilis UT26 defective in gamma-hexachlorocyclohexane dehydrochlorinase (LinA). (1993) (34)
Bacterial clade with the ribosomal RNA operon on a small plasmid rather than the chromosome (2015) (34)
Identification of Burkholderia multivorans ATCC 17616 genes induced in soil environment by in vivo expression technology. (2010) (34)
Complete Genome Sequence of the γ-Hexachlorocyclohexane-Degrading Bacterium Sphingomonas sp. Strain MM-1 (2013) (34)
The lin Genes for γ-Hexachlorocyclohexane Degradation in Sphingomonas sp. MM-1 Proved to Be Dispersed across Multiple Plasmids (2011) (33)
Biochemical Characteristics of the Novel Haloalkane Dehalogenase DatA, Isolated from the Plant Pathogen Agrobacterium tumefaciens C58 (2010) (32)
Distribution and Organization of Auxotrophic Genes on the Multichromosomal Genome of Burkholderia multivorans ATCC 17616 (2003) (30)
Weak Activity of Haloalkane Dehalogenase LinB with 1,2,3-Trichloropropane Revealed by X-Ray Crystallography and Microcalorimetry (2007) (28)
Comparison of the complete genome sequences of four γ-hexachlorocyclohexane-degrading bacterial strains: insights into the evolution of bacteria able to degrade a recalcitrant man-made pesticide (2016) (27)
Time-series metagenomic analysis reveals robustness of soil microbiome against chemical disturbance (2015) (27)
Stereochemical analysis of γ-HCH degradation by Pseudomonas paucimobilis UT26 (1993) (26)
Novel Approach to the Improvement of Biphenyl and Polychlorinated Biphenyl Degradation Activity: Promoter Implantation by Homologous Recombination (2003) (24)
Employment of the human estrogen receptor beta ligand-binding domain and co-activator SRC1 nuclear receptor-binding domain for the construction of a yeast two-hybrid detection system for endocrine disrupters. (2002) (24)
Stereoselectivity and conformational stability of haloalkane dehalogenase DbjA from Bradyrhizobium japonicum USDA110: the effect of pH and temperature (2011) (24)
Biochemical characterization of broad-specificity enzymes using multivariate experimental design and a colorimetric microplate assay: characterization of the haloalkane dehalogenase mutants. (2001) (22)
Lessons from the genomes of lindane-degrading sphingomonads. (2019) (21)
Degradation of beta-hexachlorocyclohexane by haloalkane dehalogenase LinB from gamma-hexachlorocyclohexane-utilizing bacterium Sphingobium sp. MI1205. (2007) (20)
Reconstruction of Mycobacterial Dehalogenase Rv2579 by Cumulative Mutagenesis of Haloalkane Dehalogenase LinB (2003) (20)
Host Range of the Conjugative Transfer System of IncP-9 Naphthalene-Catabolic Plasmid NAH7 and Characterization of Its oriT Region and Relaxase (2016) (19)
Structural and functional analysis of a novel haloalkane dehalogenase with two halide-binding sites. (2014) (18)
Efficient N-tailing of blunt DNA ends by Moloney murine leukemia virus reverse transcriptase (2017) (18)
Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205 (2013) (18)
Characterization of the traD Operon of Naphthalene-Catabolic Plasmid NAH7: a Host-Range Modifier in Conjugative Transfer (2008) (18)
Complete Genome Sequence of the Thermophilic Polychlorinated Biphenyl Degrader Geobacillus sp. Strain JF8 (NBRC 109937) (2014) (17)
Site-Specific Recombination System Encoded by Toluene Catabolic Transposon Tn4651 (2002) (17)
Isolation and Characterization of Tn5-Induced Mutants of Sphingomonas paucimobilis Defective in 2,5-Dichlorohydroquinone Degradation (1996) (17)
Cointegrate-resolution of toluene-catabolic transposon Tn4651: determination of crossover site and the segment required for full resolution activity. (2013) (16)
ParI, an orphan ParA family protein from Pseudomonas putida KT2440-specific genomic island, interferes with the partition system of IncP-7 plasmids. (2012) (16)
The effect of a unique halide‐stabilizing residue on the catalytic properties of haloalkane dehalogenase DatA from Agrobacterium tumefaciens C58 (2013) (16)
Insertion sequence-based cassette PCR: cultivation-independent isolation of γ-hexachlorocyclohexane-degrading genes from soil DNA (2008) (15)
Complete Genome Sequence of Pseudomonas sp. Strain TKP, Isolated from a γ-Hexachlorocyclohexane-Degrading Mixed Culture (2014) (15)
Growth Inhibition by Metabolites of γ-Hexachlorocyclohexane in Sphingobium japonicum UT26 (2006) (15)
Masamichi paucimobilis Sphingomonas-Hexachlorocyclohexane in γ Product Is Involved in Degradation of-Cleavage Dioxygenase Gene Whose meta Cloning and Sequencing of a Novel (1999) (14)
Complete nucleotide sequence of an exogenously isolated plasmid, pLB1, involved in gamma-hexachlorocyclohexane degradation. (2006) (14)
Crystallization and preliminary X-ray analysis of a novel haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94. (2009) (14)
Identification of Burkholderia multivorans ATCC 17616 genetic determinants for fitness in soil by using signature-tagged mutagenesis. (2014) (13)
The Small Protein HemP Is a Transcriptional Activator for the Hemin Uptake Operon in Burkholderia multivorans ATCC 17616 (2017) (13)
The identification of catalytic pentad in the haloalkane dehalogenase DhmA from Mycobacterium avium N85: reaction mechanism and molecular evolution. (2007) (12)
Complete Genome Sequence of a γ-Hexachlorocyclohexane Degrader, Sphingobium sp. Strain TKS, Isolated from a γ-Hexachlorocyclohexane-Degrading Microbial Community (2016) (12)
Mechanism‐based Quantitative Structure–Biodegradability Relationships for Hydrolytic Dehalogenation of Chloro‐ and Bromo‐Alkenes (1998) (12)
Expression of glycosylated haloalkane dehalogenase LinB in Pichia pastoris. (2006) (12)
Complete Genome Sequence of Pseudomonas aeruginosa MTB-1, Isolated from a Microbial Community Enriched by the Technical Formulation of Hexachlorocyclohexane (2014) (11)
Biodegradation of γ-hexachlorocyclohexane by transgenic hairy root cultures of Cucurbita moschata that accumulate recombinant bacterial LinA (2016) (11)
Complete Genome Sequence of Bradyrhizobium diazoefficiens USDA 122, a Nitrogen-Fixing Soybean Symbiont (2017) (11)
Complete Genome Sequence of Sphingopyxis macrogoltabida Type Strain NBRC 15033, Originally Isolated as a Polyethylene Glycol Degrader (2015) (10)
Biodegradation of Organochlorine Pesticides (2016) (10)
Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane (2014) (10)
Complete Genome Sequence of a γ-Hexachlorocyclohexane-Degrading Bacterium, Sphingobium sp. Strain MI1205 (2016) (10)
Compounds that enhance the tailing activity of Moloney murine leukemia virus reverse transcriptase (2017) (10)
Complete Genome Sequence of Polyvinyl Alcohol-Degrading Strain Sphingopyxis sp. 113P3 (NBRC 111507) (2015) (9)
Crystallization and preliminary X-ray diffraction analysis of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26. (1999) (9)
Suppression of pleiotropic phenotypes of a Burkholderia multivorans fur mutant by oxyR mutation. (2012) (8)
Purification and characterization of haloalkane dehalogenase of a new substrate class from g-hexachlorocyclohexane-degrading bacterium (1997) (8)
Crystallization and preliminary crystallographic analysis of a haloalkane dehalogenase, DbjA, from Bradyrhizobium japonicum USDA110. (2007) (8)
Crystal structure of the haloalkane dehalogenase fromSphingomonas paucimobilisUT26 (2000) (8)
Complete Genome Sequence of Ralstonia pickettii DTP0602, a 2,4,6-Trichlorophenol Degrader (2013) (8)
Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader (2016) (8)
Complete Genome Sequence of a Phenanthrene Degrader, Mycobacterium sp. Strain EPa45 (NBRC 110737), Isolated from a Phenanthrene-Degrading Consortium (2015) (8)
Determination of haloalkane dehalogenase activity by capillary zone electrophoresis. (2000) (8)
Complete Genome Sequence of Polypropylene Glycol- and Polyethylene Glycol-Degrading Sphingopyxis macrogoltabida Strain EY-1 (2015) (7)
Organization and localization of the dnaA and dnaK gene regions on the multichromosomal genome of Burkholderia multivorans ATCC 17616. (2005) (7)
Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader (2016) (6)
Complete Genome Sequence of a Phenanthrene Degrader, Burkholderia sp. HB-1 (NBRC 110738) (2015) (6)
Pseudomonas fluorescens KKL101, a benzoic acid degrader in a mixed culture that degrades biphenyl and polychlorinated biphenyls. (1995) (6)
Mycobacterial Haloalkane Dehalogenases: Cloning, BiochemicalProperties and distribution. (2005) (5)
Complete genome sequence of Burkholderia caribensis Bcrs1W (NBRC110739), a strain co-residing with phenanthrene degrader Mycobacterium sp. EPa45. (2016) (5)
Inhibitory effect of Pseudomonas putida nitrogen-related phosphotransferase system on conjugative transfer of IncP-9 plasmid from Escherichia coli. (2013) (5)
Crystallization and preliminary X-ray analysis of gamma-hexachlorocyclohexane dehydrochlorinase LinA from Sphingobium japonicum UT26. (2009) (5)
Special Issue: Microbial Degradation of Xenobiotics (2020) (5)
Complete Genome Sequence of Methylobacterium sp. Strain AMS5, an Isolate from a Soybean Stem (2016) (5)
Pivotal role of anthranilate dioxygenase genes in the adaptation of Burkholderia multivorans ATCC 17616 in soil. (2012) (5)
Mobile Genetic Elements Involved in the Evolution of Bacteria that Degrade Recalcitrant Xenobiotic Compounds (2019) (4)
Suppression of substrate inhibition in phenanthrene-degrading Mycobacterium by co-cultivation with a non-degrading Burkholderia strain. (2019) (4)
Cloning of γ-hexachlorocyclohexane dehydrochlorinase gene with its flanking regions from soil by activity-based screening techniques (2012) (4)
Appearance and Evolution of γ-Hexachlorocyclohexane-Degrading Bacteria (2014) (4)
Construction and characterization of histidine-taggedhaloalkane dehalogenase (LinB) of a new substrate class from agamma-hexachlorocyclohexane-degrading bacterium, Sphingomonaspaucimobilis UT26 (1999) (4)
Complete Nucleotide Sequence of TOL Plasmid pDK1 Provides Evidence for Evolutionary History of IncP-7 Catabolic Plasmids (2010) (3)
Microbial communities developing within bulk sediments under fish carcasses on a tidal flat (2021) (3)
Properties and efficient scrap-and-build repairing of mechanically sheared 3’ DNA ends (2019) (3)
Complete Genome Sequence of a Polypropylene Glycol-Degrading Strain, Microbacterium sp. No. 7 (2015) (3)
Properties and efficient scrap-and-build repairing of mechanically sheared 3’ DNA ends (2019) (3)
Identification of Insertion Sequence from a γ-Hexachlorocyclohexane Degrading Bacterium, Sphingomonas paucimobilis UT26 (2005) (3)
Isolation of oxygenase genes for indigo-forming activity from an artificially polluted soil metagenome by functional screening using Pseudomonas putida strains as hosts (2015) (3)
Transcriptome Analysis of Zygotic Induction During Conjugative Transfer of Plasmid RP4 (2020) (3)
Development of a Crystallization Protocol for the DbeA1 Variant of Novel Haloalkane Dehalogenase from Bradyrhizobium elkani USDA94 (2011) (3)
Crystallization and preliminary X-ray analysis of the haloalkane dehalogenase DatA from Agrobacterium tumefaciens C58. (2012) (2)
Optimization of single strand DNA incorporation reaction by Moloney murine leukaemia virus reverse transcriptase (2018) (2)
Reconstruction of a Soil Microbial Network Induced by Stress Temperature (2022) (2)
Establishment of plasmid vector and allelic exchange mutagenesis systems in a mycobacterial strain that is able to degrade polycyclic aromatic hydrocarbon (2018) (2)
[Metabolic pathway, genes, and enzymes for the degradation of chlorinated pesticide, gamma-hexachlorocyclohexane]. (2005) (2)
Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family (2020) (1)
Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane (2014) (1)
Crystal structure of haloalkane dehalogenase LinB from Sphingobium sp. MI1205 (2013) (1)
Structure-Based Engineering of Haloalkane Dehalogenase (2006) (1)
The crystal structure of LinA (2010) (1)
Expression of an alcohol dehydrogenase gene in a heterotrophic bacterium induces carbon dioxide-dependent high-yield growth under oligotrophic conditions. (2020) (1)
Protein engineering of haloalkane dehalogenase LinB:reconstruction of active site and modification of entrancetunnel (2006) (1)
PCB / biphenyl degradation operon repressed by different compounds in Acidovorax sp. KKS102 and Burkholderia multivorans ATCC 17616 (2010) (1)
Hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis UT26 with 1,3-propanediol, a product of debromidation of dibrompropane, at 2.0A resolution (2000) (0)
Modulation of Enantioselectivity in Haloalkane DehalogenaseDbjA by Engineering of a Surface Loop (2008) (0)
DevelopmentofaCrystallizationProtocolfortheDbeA1VariantofNovel Haloalkane Dehalogenase from Bradyrhizobium elkani USDA94 (2011) (0)
Site-Specific Recombination System Encoded by Toluene Catabolic Transposon Tn 4651 (2002) (0)
Genome evolution related to γ-hexachlorocyclohexane metabolic function in the soil microbial population. (2022) (0)
Compounds that enhance the tailing activity of Moloney murine leukemia virus reverse transcriptase (2017) (0)
Crystal structure of haloalkane dehalogenase LinB H247A mutant from Sphingobium sp. MI1205 (2013) (0)
Semi-Rational Engineering of Haloalkane Dehalogenases DHAATowards Improved Activity with 1,2-Dichloroethane (2008) (0)
Engineering of Haloalkane Dehalogenase DhaA from Rhodococcus rhodochrous NCIMB 13064 Towards Higher Enantioselectivity (2006) (0)
3H09-2 Research of gamma-HCH degradation genes from Sphingomonas sp. MM-1 which is from gamma-HCH contaminated soil in India (2007) (0)
Strategies to Reveal Genomic Function in Natural Soil Systems (2014) (0)
Engineering of Enantioselective Haloalkane Dehalogenase by Cumulative Mutagenesis (2006) (0)
Rapid detection of haloalkane dehalogenase activity bycapillary zone electrophoresis (2000) (0)
Protein Engineering ofHaloalkane Dehalogenases: Towards theChange of Reaction Mechanism (2008) (0)
0605 GenomeMatcher : GUI tool for genomic analysis (2010) (0)
Biochemical and structural characterization of novel haloalkanedehalogenase DbeA from Bradyrhizobium elkani USDA94 possesingtwo halide binding sites (2010) (0)
Biodegradation of γ-hexachlorocyclohexane by transgenic hairy root cultures of Cucurbita moschata that accumulate recombinant bacterial LinA (2016) (0)
Haloalkane dehalogenase from Agrobacterium tumefaciens C58 withnew halide-stabilising residues and unique kinetics (2010) (0)
Crystallization and Preliminary Crystallographic Analysis of aHaloalkane Dehalogenase DbjA from Bradyrhizobium japonicumUSDA110. (2007) (0)
P117 APPLICATION OF DEGENERATE OLIGONUCLEOTIDE GENE SHUFFLING FOR CONSTRUCTION OF HYBRID HALOALKANE DEHALOGENASE (2003) (0)
Crystal structure of the haloalkane dehalogenase DbjA (2005) (0)
Elucidation on bacterial strategy responding to soil environment by molecular genetics. (2009) (0)
Design and Evolution of Haloalkane Dehalogenase with Enhanced Conversion of 1,2,3-Trichloropropane by Modification of Access Tunnels (2009) (0)
A transcriptional regulator, IscR, of Burkholderia multivorans acts as both repressor and activator for transcription of iron-sulfur cluster-biosynthetic isc operon. (2020) (0)
Comparative Binding Energy (COMBINE) Analysis of the SubstrateSpecificity of Haloalkane Dehalogenase from Bradyrhizobiumjaponicum USDA110. (2007) (0)
LINB COMPLEXED WITH BUTAN-1-OL (2001) (0)
Biological Macromolecules ( ICCBM 13 ) . " Development of aCrystallization Protocol for theDbeA 1 Variant ofNovel Haloalkane Dehalogenase from Bradyrhizobium elkani USDA 94 (2010) (0)
Comparative Binding Energy Analysis of Haloalkane Dehalogenasefrom Bradyrhizobium japonicum USDA110 (2007) (0)
Mechanism-based Quantitative Structure–Biodegradability Relationships for Hydrolytic Dehalogenation of Chloro- and Bromo-Alkenes: QSAR for Dehalogenation of Haloalkenes (1998) (0)
COMPLEX OF HYDROLYTIC HALOALKANE DEHALOGENASE LINB FROM SPHINGOMONAS PAUCIMOBILIS UT26 WITH 1,2-PROPANEDIOL (PRODUCT OF DEHALOGENATION OF 1,2-DIBROMOPROPANE) AT 1.85A (2003) (0)
Title Time-series metagenomic analysis reveals robustness of soilmicrobiome against chemical disturbance (2018) (0)
Discovery of Stereoselective Haloalkane Dehalogenases: New Toolfor Asymmetric Syntheses. (2006) (0)
Application of differential scanning fluorimetry to a fusion protein composed of two distinct enzymes (2017) (0)
Molecular Bases of Enantioselectivity of Haloalkane Dehalogenase DbjA (2011) (0)
Validation of Putative Enzymes from Genomic Projects:Confirmation of Dehalogenation ARv2ctivity for MycobacterialProtein 579 (2003) (0)
Conjugative Transfer of IncP-9 Catabolic Plasmids Requires a Previously Uncharacterized Gene, mpfK, Whose Homologs Are Conserved in Various MPFT-Type Plasmids (2019) (0)
Properties and biotechnological applications of natural and engineered haloalkane dehalogenases (2015) (0)
Haloalkane Dehalogenases Possess Two Different Structural Bases for Their Enantioselectivity (2007) (0)
STRUCTURE OF 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE (LINB) FROM SPHINGOMONAS PAUCIMOBILIS COMPLEXED WITH 1,2-DICHLOROPROPANE (2001) (0)
Hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis UT26 AT 1.6 A resolution (2000) (0)
Study on microbial degradation of organochlorine pesticide, γ-hexachlorocyclohexane, which causes environmental pollution. (2000) (0)
Natural and Engineered Enantioselective HaloalkaneDehalogenases (2006) (0)
Computer-assisted Directed Evolution of Haloalkane DehalogenaseDhaA Towards Degradation of 1,2,3-Trichloropropane (2006) (0)
STRUCTURE OF LINB COMPLEXED WITH 1,2-DICHLOROETHANE (2001) (0)
Crystallization and preliminary X-ray diffraction analysis ofhaloalkane dehalogenase LinB from Sphingomonas paucimobilisUT26 (1999) (0)
Crystal structure of haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94 (2014) (0)
Growth inhibition by metabolites of gamma-hexachlorocyclohexane in Sphingobium japonicum UT26. (2006) (0)
Complete Nucleotide Sequence of an Exogenously Isolated Plasmid, pLB1, Involved in (cid:2) -Hexachlorocyclohexane Degradation (cid:1) (2006) (0)
Crystal structure and site-directed mutagenesis analyses of haloalkane 1 dehalogenase LinB from Sphingobium sp . MI 1205 2 Running title : Structure of LinB from Sphingobium sp (2013) (0)
Mycobacteria as a Source of Haloalkane Dehalogenases:Identification of the Catalytic Pentad within the Structure ofDhmA from Mycobacterium avium N85. (2006) (0)
Quantitative Comparison of Binding Sites within the ProteinFamily of Haloalkane Dehalogenases (2008) (0)
paucimobilis Sphingomonas-Hexachlorocyclohexane in γ Degradation Pathway of Genes Involved in the Downstream Identification and Characterization of (2005) (0)
Structure of the Rhodococcus haloalkane dehalogenase mutant with enhanced enantioselectivity (2008) (0)
Sphingomonas paucimobilis-Hexachlorocyclohexane by γ in Degradation of Dehalogenase Gene Whose Product Is Involved 2 , 5-Dichlorohydroquinone Reductive Cloning and Sequencing of a (1998) (0)
Determination of haloalkane dehalogenase enzymatic activity bycapillary zone electrophoresis (2000) (0)
Engineering of enantioselective enzyme by cumulativemutagenesis. (2006) (0)
Organization and dynamism of gamma-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26 genome (2010) (0)
Expression of Haloalkane Dehalogenase LinB in Pichia pastoris (2006) (0)
Comparison of Broad-Specificity Haloalkane Dehalogenases DbjAand DmbA Using Multivariate Statistical Approach. (2008) (0)
M in Pseudomonas paucimobilis . degradation of gamma-hexachlorocyclohexane dehydrogenase gene involved in the 2 , 5-dichloro-2 , 5-cyclohexadiene-1 , 4-diol Cloning and sequencing of a (2003) (0)
Engineering of the Entrance Tunnel of LinB 52623 (2003) (0)
Kinetics and enantioselectivity of haloalkane dehalogenase fromAgrobacterium tumefaciens c58 (2010) (0)
Algorisms used for in silico finishing of bacterial genomes based on short-read assemblage implemented in GenoFinisher, AceFileViewer, and ShortReadManager. (2022) (0)
Thermodynamic Analysis of Enantioselectivity of HaloalkaneDehalogenase DbjA and its Variants DbjA and DbjA+H139A towardsBrominated Esters and substituted Bromoalkanes (2008) (0)
Conjugative transfer of naphthalene-catabolic plasmid NAH7 regulated by nitrogen-related phosphotransferase system of recipient cells (2010) (0)
bacterium, Sphingomonas paucimobilis UT26. gamma-hexachlorocyclohexane-degrading class from a haloalkane dehalogenase of a new substrate Purification and characterization of a (2013) (0)
Optimization of the packing in the haloalkane dehalogenase crystal by seeding (2010) (0)
GenomeMatcher: Tool box for efficient genomic analysis. (2010) (0)

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What Schools Are Affiliated With Yuji Nagata?

Yuji Nagata is affiliated with the following schools: