Yuji Nagata
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Physics
Yuji Nagata's Degrees
- PhD Physics University of Tokyo
- Masters Physics University of Tokyo
- Bachelors Physics University of Tokyo
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(Suggest an Edit or Addition)Yuji Nagata's Published Works
Number of citations in a given year to any of this author's works
Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author
Published Works
- Design and Experimental Application of a Novel Non-Degenerate Universal Primer Set that Amplifies Prokaryotic 16S rRNA Genes with a Low Possibility to Amplify Eukaryotic rRNA Genes (2013) (310)
- Redesigning dehalogenase access tunnels as a strategy for degrading an anthropogenic substrate. (2009) (242)
- GenomeMatcher: A graphical user interface for DNA sequence comparison (2008) (214)
- Aerobic degradation of lindane (γ-hexachlorocyclohexane) in bacteria and its biochemical and molecular basis (2007) (180)
- Complete analysis of genes and enzymes for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26 (1999) (175)
- Molecular cloning of a Pseudomonas paucimobilis gene encoding a 17-kilodalton polypeptide that eliminates HCl molecules from gamma-hexachlorocyclohexane (1991) (159)
- Cloning and sequencing of a dehalogenase gene encoding an enzyme with hydrolase activity involved in the degradation of gamma-hexachlorocyclohexane in Pseudomonas paucimobilis (1993) (154)
- Purification and characterization of a haloalkane dehalogenase of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26 (1997) (138)
- Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26. (2000) (122)
- Modification of Activity and Specificity of Haloalkane Dehalogenase from Sphingomonas paucimobilis UT26 by Engineering of Its Entrance Tunnel* (2003) (118)
- Complete Genome Sequence of Acidovorax sp. Strain KKS102, a Polychlorinated-Biphenyl Degrader (2012) (116)
- Cloning and Sequencing of a Novel meta-Cleavage Dioxygenase Gene Whose Product Is Involved in Degradation of γ-Hexachlorocyclohexane in Sphingomonas paucimobilis (1999) (106)
- Strategies for bioremediation of polychlorinated biphenyls (2004) (105)
- Cloning and Sequencing of a 2,5-Dichlorohydroquinone Reductive Dehalogenase Gene Whose Product Is Involved in Degradation of γ-Hexachlorocyclohexane by Sphingomonas paucimobilis (1998) (103)
- Isolation and characterization of naphthalene-catabolic genes and plasmids from oil-contaminated soil by using two cultivation-independent approaches (2007) (101)
- Enantioselectivity of haloalkane dehalogenases and its modulation by surface loop engineering. (2010) (99)
- Nucleotide sequence and functional analysis of the meta-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102 (1994) (97)
- Cloning and sequencing of a 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase gene involved in the degradation of gamma-hexachlorocyclohexane in Pseudomonas paucimobilis (1994) (95)
- Two Different Types of Dehalogenases, LinA and LinB, Involved in γ-Hexachlorocyclohexane Degradation inSphingomonas paucimobilis UT26 Are Localized in the Periplasmic Space without Molecular Processing (1999) (91)
- Dehydrochlorination of γ-Hexachlorocyclohexane (γ-BHC) by γ-BHC-Assimilating Pseudomonas paucimobilis (1989) (85)
- Crystal structure of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 at 0.95 A resolution: dynamics of catalytic residues. (2004) (82)
- Catalytic Mechanism of the Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26* (2003) (76)
- Identification of the bphA and bphB genes of Pseudomonas sp. strains KKS102 involved in degradation of biphenyl and polychlorinated biphenyls. (1994) (73)
- PcpA, which is involved in the degradation of pentachlorophenol in Sphingomonas chlorophenolica ATCC39723, is a novel type of ring‐cleavage dioxygenase (1999) (70)
- Two Rhizobial Strains, Mesorhizobium loti MAFF303099 and Bradyrhizobium japonicum USDA110, Encode Haloalkane Dehalogenases with Novel Structures and Substrate Specificities (2005) (69)
- Degradation of β-Hexachlorocyclohexane by Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26 (2005) (69)
- Purification and Characterization of γ-Hexachlorocyclohexane (γ-HCH) Dehydrochlorinase (LinA) from Pseudomonas paucimobilis (1993) (68)
- Reaction Mechanism and Stereochemistry of γ-Hexachlorocyclohexane Dehydrochlorinase LinA* (2001) (68)
- Identification and Characterization of Genes Involved in the Downstream Degradation Pathway of γ-Hexachlorocyclohexane in Sphingomonas paucimobilis UT26 (2005) (67)
- Halide-stabilizing residues of haloalkane dehalogenases studied by quantum mechanic calculations and site-directed mutagenesis. (2002) (62)
- Quantitative analysis of substrate specificity of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26. (2005) (61)
- Identification of the bphA4 gene encoding ferredoxin reductase involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102 (1994) (58)
- Cloning and Characterization of linR, Involved in Regulation of the Downstream Pathway for γ-Hexachlorocyclohexane Degradation in Sphingomonas paucimobilis UT26 (2002) (58)
- Complete Genome Sequence of the Representative γ-Hexachlorocyclohexane-Degrading Bacterium Sphingobium japonicum UT26 (2010) (56)
- Aerobic mineralization of γ-HCH by Pseudomonas paucimobilis UT26 (1993) (56)
- High-Temperature-Induced Transposition of Insertion Elements in Burkholderia multivorans ATCC 17616 (2005) (55)
- BphS, a Key Transcriptional Regulator of bph Genes Involved in Polychlorinated Biphenyl/Biphenyl Degradation inPseudomonas sp. KKS102* (2001) (54)
- Expression of the bph genes involved in biphenyl/PCB degradation in Pseudomonas sp. KKS102 induced by the biphenyl degradation intermediate, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. (2000) (53)
- Degradation of β-hexachlorocyclohexane by haloalkane dehalogenase LinB from γ-hexachlorocyclohexane-utilizing bacterium Sphingobium sp. MI1205 (2007) (53)
- Complete Nucleotide Sequence of an Exogenously Isolated Plasmid, pLB1, Involved in γ-Hexachlorocyclohexane Degradation (2006) (51)
- Cloning, Biochemical Properties, and Distribution of Mycobacterial Haloalkane Dehalogenases (2005) (50)
- Structure–specificity relationships for haloalkane dehalogenases (2001) (50)
- Identification of a response regulator gene for catabolite control from a PCB‐degrading β‐proteobacteria, Acidovorax sp. KKS102 (2006) (50)
- Haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26: X-ray crystallographic studies of dehalogenation of brominated substrates. (2003) (47)
- Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium. (2011) (46)
- Isolation of oxygenase genes for indigo-forming activity from an artificially polluted soil metagenome by functional screening using Pseudomonas putida strains as hosts (2015) (45)
- Identification and Characterization of Genes Encoding a Putative ABC-Type Transporter Essential for Utilization of γ-Hexachlorocyclohexane in Sphingobium japonicum UT26 (2007) (45)
- Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition. (2002) (44)
- Identification of protein fold and catalytic residues of γ‐hexachlorocyclohexane dehydrochlorinase LinA (2001) (43)
- Construction of Signature-tagged Mutant Library in Mesorhizobium loti as a Powerful Tool for Functional Genomics (2008) (43)
- Construction and characterization of histidine-tagged haloalkane dehalogenase (LinB) of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26. (1999) (43)
- Complete Nucleotide Sequence of TOL Plasmid pDK1 Provides Evidence for Evolutionary History of IncP-7 Catabolic Plasmids (2010) (42)
- Identification of the catalytic triad in the haloalkane dehalogenase from Sphingomonas paucimobilis UT26 (1999) (42)
- Isolation and characterization of acetoacetyl-CoA thiolase gene essential for n-decane assimilation in yeast Yarrowia lipolytica. (2001) (41)
- Properties and biotechnological applications of natural and engineered haloalkane dehalogenases (2015) (40)
- Crystal structure of γ-hexachlorocyclohexane Dehydrochlorinase LinA from Sphingobium japonicum UT26. (2010) (39)
- Analysis of extracellular alginate lyase and its gene from a marine bacterial strain, Pseudoalteromonas atlantica AR06 (2010) (38)
- Complete sequence determination combined with analysis of transposition/site-specific recombination events to explain genetic organization of IncP-7 TOL plasmid pWW53 and related mobile genetic elements. (2007) (38)
- Pleiotropic roles of iron-responsive transcriptional regulator Fur in Burkholderia multivorans. (2008) (38)
- Conjugal Transfer of Polychlorinated Biphenyl/Biphenyl Degradation Genes in Acidovorax sp. Strain KKS102, Which Are Located on an Integrative and Conjugative Element (2012) (36)
- Functional Analysis of Unique Class II Insertion Sequence IS1071 (2006) (34)
- Distribution of gamma-hexachlorocyclohexane-degrading genes on three replicons in Sphingobium japonicum UT26. (2006) (34)
- Isolation and characterization of Tn5-induced mutants of Pseudomonas paucimobilis UT26 defective in gamma-hexachlorocyclohexane dehydrochlorinase (LinA). (1993) (34)
- Bacterial clade with the ribosomal RNA operon on a small plasmid rather than the chromosome (2015) (34)
- Identification of Burkholderia multivorans ATCC 17616 genes induced in soil environment by in vivo expression technology. (2010) (34)
- Complete Genome Sequence of the γ-Hexachlorocyclohexane-Degrading Bacterium Sphingomonas sp. Strain MM-1 (2013) (34)
- The lin Genes for γ-Hexachlorocyclohexane Degradation in Sphingomonas sp. MM-1 Proved to Be Dispersed across Multiple Plasmids (2011) (33)
- Biochemical Characteristics of the Novel Haloalkane Dehalogenase DatA, Isolated from the Plant Pathogen Agrobacterium tumefaciens C58 (2010) (32)
- Distribution and Organization of Auxotrophic Genes on the Multichromosomal Genome of Burkholderia multivorans ATCC 17616 (2003) (30)
- Weak Activity of Haloalkane Dehalogenase LinB with 1,2,3-Trichloropropane Revealed by X-Ray Crystallography and Microcalorimetry (2007) (28)
- Comparison of the complete genome sequences of four γ-hexachlorocyclohexane-degrading bacterial strains: insights into the evolution of bacteria able to degrade a recalcitrant man-made pesticide (2016) (27)
- Time-series metagenomic analysis reveals robustness of soil microbiome against chemical disturbance (2015) (27)
- Stereochemical analysis of γ-HCH degradation by Pseudomonas paucimobilis UT26 (1993) (26)
- Novel Approach to the Improvement of Biphenyl and Polychlorinated Biphenyl Degradation Activity: Promoter Implantation by Homologous Recombination (2003) (24)
- Employment of the human estrogen receptor beta ligand-binding domain and co-activator SRC1 nuclear receptor-binding domain for the construction of a yeast two-hybrid detection system for endocrine disrupters. (2002) (24)
- Stereoselectivity and conformational stability of haloalkane dehalogenase DbjA from Bradyrhizobium japonicum USDA110: the effect of pH and temperature (2011) (24)
- Biochemical characterization of broad-specificity enzymes using multivariate experimental design and a colorimetric microplate assay: characterization of the haloalkane dehalogenase mutants. (2001) (22)
- Lessons from the genomes of lindane-degrading sphingomonads. (2019) (21)
- Degradation of beta-hexachlorocyclohexane by haloalkane dehalogenase LinB from gamma-hexachlorocyclohexane-utilizing bacterium Sphingobium sp. MI1205. (2007) (20)
- Reconstruction of Mycobacterial Dehalogenase Rv2579 by Cumulative Mutagenesis of Haloalkane Dehalogenase LinB (2003) (20)
- Host Range of the Conjugative Transfer System of IncP-9 Naphthalene-Catabolic Plasmid NAH7 and Characterization of Its oriT Region and Relaxase (2016) (19)
- Structural and functional analysis of a novel haloalkane dehalogenase with two halide-binding sites. (2014) (18)
- Efficient N-tailing of blunt DNA ends by Moloney murine leukemia virus reverse transcriptase (2017) (18)
- Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205 (2013) (18)
- Characterization of the traD Operon of Naphthalene-Catabolic Plasmid NAH7: a Host-Range Modifier in Conjugative Transfer (2008) (18)
- Complete Genome Sequence of the Thermophilic Polychlorinated Biphenyl Degrader Geobacillus sp. Strain JF8 (NBRC 109937) (2014) (17)
- Site-Specific Recombination System Encoded by Toluene Catabolic Transposon Tn4651 (2002) (17)
- Isolation and Characterization of Tn5-Induced Mutants of Sphingomonas paucimobilis Defective in 2,5-Dichlorohydroquinone Degradation (1996) (17)
- Cointegrate-resolution of toluene-catabolic transposon Tn4651: determination of crossover site and the segment required for full resolution activity. (2013) (16)
- ParI, an orphan ParA family protein from Pseudomonas putida KT2440-specific genomic island, interferes with the partition system of IncP-7 plasmids. (2012) (16)
- The effect of a unique halide‐stabilizing residue on the catalytic properties of haloalkane dehalogenase DatA from Agrobacterium tumefaciens C58 (2013) (16)
- Insertion sequence-based cassette PCR: cultivation-independent isolation of γ-hexachlorocyclohexane-degrading genes from soil DNA (2008) (15)
- Complete Genome Sequence of Pseudomonas sp. Strain TKP, Isolated from a γ-Hexachlorocyclohexane-Degrading Mixed Culture (2014) (15)
- Growth Inhibition by Metabolites of γ-Hexachlorocyclohexane in Sphingobium japonicum UT26 (2006) (15)
- Masamichi paucimobilis Sphingomonas-Hexachlorocyclohexane in γ Product Is Involved in Degradation of-Cleavage Dioxygenase Gene Whose meta Cloning and Sequencing of a Novel (1999) (14)
- Complete nucleotide sequence of an exogenously isolated plasmid, pLB1, involved in gamma-hexachlorocyclohexane degradation. (2006) (14)
- Crystallization and preliminary X-ray analysis of a novel haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94. (2009) (14)
- Identification of Burkholderia multivorans ATCC 17616 genetic determinants for fitness in soil by using signature-tagged mutagenesis. (2014) (13)
- The Small Protein HemP Is a Transcriptional Activator for the Hemin Uptake Operon in Burkholderia multivorans ATCC 17616 (2017) (13)
- The identification of catalytic pentad in the haloalkane dehalogenase DhmA from Mycobacterium avium N85: reaction mechanism and molecular evolution. (2007) (12)
- Complete Genome Sequence of a γ-Hexachlorocyclohexane Degrader, Sphingobium sp. Strain TKS, Isolated from a γ-Hexachlorocyclohexane-Degrading Microbial Community (2016) (12)
- Mechanism‐based Quantitative Structure–Biodegradability Relationships for Hydrolytic Dehalogenation of Chloro‐ and Bromo‐Alkenes (1998) (12)
- Expression of glycosylated haloalkane dehalogenase LinB in Pichia pastoris. (2006) (12)
- Complete Genome Sequence of Pseudomonas aeruginosa MTB-1, Isolated from a Microbial Community Enriched by the Technical Formulation of Hexachlorocyclohexane (2014) (11)
- Biodegradation of γ-hexachlorocyclohexane by transgenic hairy root cultures of Cucurbita moschata that accumulate recombinant bacterial LinA (2016) (11)
- Complete Genome Sequence of Bradyrhizobium diazoefficiens USDA 122, a Nitrogen-Fixing Soybean Symbiont (2017) (11)
- Complete Genome Sequence of Sphingopyxis macrogoltabida Type Strain NBRC 15033, Originally Isolated as a Polyethylene Glycol Degrader (2015) (10)
- Biodegradation of Organochlorine Pesticides (2016) (10)
- Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane (2014) (10)
- Complete Genome Sequence of a γ-Hexachlorocyclohexane-Degrading Bacterium, Sphingobium sp. Strain MI1205 (2016) (10)
- Compounds that enhance the tailing activity of Moloney murine leukemia virus reverse transcriptase (2017) (10)
- Complete Genome Sequence of Polyvinyl Alcohol-Degrading Strain Sphingopyxis sp. 113P3 (NBRC 111507) (2015) (9)
- Crystallization and preliminary X-ray diffraction analysis of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26. (1999) (9)
- Suppression of pleiotropic phenotypes of a Burkholderia multivorans fur mutant by oxyR mutation. (2012) (8)
- Purification and characterization of haloalkane dehalogenase of a new substrate class from g-hexachlorocyclohexane-degrading bacterium (1997) (8)
- Crystallization and preliminary crystallographic analysis of a haloalkane dehalogenase, DbjA, from Bradyrhizobium japonicum USDA110. (2007) (8)
- Crystal structure of the haloalkane dehalogenase fromSphingomonas paucimobilisUT26 (2000) (8)
- Complete Genome Sequence of Ralstonia pickettii DTP0602, a 2,4,6-Trichlorophenol Degrader (2013) (8)
- Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader (2016) (8)
- Complete Genome Sequence of a Phenanthrene Degrader, Mycobacterium sp. Strain EPa45 (NBRC 110737), Isolated from a Phenanthrene-Degrading Consortium (2015) (8)
- Determination of haloalkane dehalogenase activity by capillary zone electrophoresis. (2000) (8)
- Complete Genome Sequence of Polypropylene Glycol- and Polyethylene Glycol-Degrading Sphingopyxis macrogoltabida Strain EY-1 (2015) (7)
- Organization and localization of the dnaA and dnaK gene regions on the multichromosomal genome of Burkholderia multivorans ATCC 17616. (2005) (7)
- Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader (2016) (6)
- Complete Genome Sequence of a Phenanthrene Degrader, Burkholderia sp. HB-1 (NBRC 110738) (2015) (6)
- Pseudomonas fluorescens KKL101, a benzoic acid degrader in a mixed culture that degrades biphenyl and polychlorinated biphenyls. (1995) (6)
- Mycobacterial Haloalkane Dehalogenases: Cloning, BiochemicalProperties and distribution. (2005) (5)
- Complete genome sequence of Burkholderia caribensis Bcrs1W (NBRC110739), a strain co-residing with phenanthrene degrader Mycobacterium sp. EPa45. (2016) (5)
- Inhibitory effect of Pseudomonas putida nitrogen-related phosphotransferase system on conjugative transfer of IncP-9 plasmid from Escherichia coli. (2013) (5)
- Crystallization and preliminary X-ray analysis of gamma-hexachlorocyclohexane dehydrochlorinase LinA from Sphingobium japonicum UT26. (2009) (5)
- Special Issue: Microbial Degradation of Xenobiotics (2020) (5)
- Complete Genome Sequence of Methylobacterium sp. Strain AMS5, an Isolate from a Soybean Stem (2016) (5)
- Pivotal role of anthranilate dioxygenase genes in the adaptation of Burkholderia multivorans ATCC 17616 in soil. (2012) (5)
- Mobile Genetic Elements Involved in the Evolution of Bacteria that Degrade Recalcitrant Xenobiotic Compounds (2019) (4)
- Suppression of substrate inhibition in phenanthrene-degrading Mycobacterium by co-cultivation with a non-degrading Burkholderia strain. (2019) (4)
- Cloning of γ-hexachlorocyclohexane dehydrochlorinase gene with its flanking regions from soil by activity-based screening techniques (2012) (4)
- Appearance and Evolution of γ-Hexachlorocyclohexane-Degrading Bacteria (2014) (4)
- Construction and characterization of histidine-taggedhaloalkane dehalogenase (LinB) of a new substrate class from agamma-hexachlorocyclohexane-degrading bacterium, Sphingomonaspaucimobilis UT26 (1999) (4)
- Complete Nucleotide Sequence of TOL Plasmid pDK1 Provides Evidence for Evolutionary History of IncP-7 Catabolic Plasmids (2010) (3)
- Microbial communities developing within bulk sediments under fish carcasses on a tidal flat (2021) (3)
- Properties and efficient scrap-and-build repairing of mechanically sheared 3’ DNA ends (2019) (3)
- Complete Genome Sequence of a Polypropylene Glycol-Degrading Strain, Microbacterium sp. No. 7 (2015) (3)
- Properties and efficient scrap-and-build repairing of mechanically sheared 3’ DNA ends (2019) (3)
- Identification of Insertion Sequence from a γ-Hexachlorocyclohexane Degrading Bacterium, Sphingomonas paucimobilis UT26 (2005) (3)
- Isolation of oxygenase genes for indigo-forming activity from an artificially polluted soil metagenome by functional screening using Pseudomonas putida strains as hosts (2015) (3)
- Transcriptome Analysis of Zygotic Induction During Conjugative Transfer of Plasmid RP4 (2020) (3)
- Development of a Crystallization Protocol for the DbeA1 Variant of Novel Haloalkane Dehalogenase from Bradyrhizobium elkani USDA94 (2011) (3)
- Crystallization and preliminary X-ray analysis of the haloalkane dehalogenase DatA from Agrobacterium tumefaciens C58. (2012) (2)
- Optimization of single strand DNA incorporation reaction by Moloney murine leukaemia virus reverse transcriptase (2018) (2)
- Reconstruction of a Soil Microbial Network Induced by Stress Temperature (2022) (2)
- Establishment of plasmid vector and allelic exchange mutagenesis systems in a mycobacterial strain that is able to degrade polycyclic aromatic hydrocarbon (2018) (2)
- [Metabolic pathway, genes, and enzymes for the degradation of chlorinated pesticide, gamma-hexachlorocyclohexane]. (2005) (2)
- Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family (2020) (1)
- Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards β-hexachlorocyclohexane (2014) (1)
- Crystal structure of haloalkane dehalogenase LinB from Sphingobium sp. MI1205 (2013) (1)
- Structure-Based Engineering of Haloalkane Dehalogenase (2006) (1)
- The crystal structure of LinA (2010) (1)
- Expression of an alcohol dehydrogenase gene in a heterotrophic bacterium induces carbon dioxide-dependent high-yield growth under oligotrophic conditions. (2020) (1)
- Protein engineering of haloalkane dehalogenase LinB:reconstruction of active site and modification of entrancetunnel (2006) (1)
- PCB / biphenyl degradation operon repressed by different compounds in Acidovorax sp. KKS102 and Burkholderia multivorans ATCC 17616 (2010) (1)
- Hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis UT26 with 1,3-propanediol, a product of debromidation of dibrompropane, at 2.0A resolution (2000) (0)
- Modulation of Enantioselectivity in Haloalkane DehalogenaseDbjA by Engineering of a Surface Loop (2008) (0)
- DevelopmentofaCrystallizationProtocolfortheDbeA1VariantofNovel Haloalkane Dehalogenase from Bradyrhizobium elkani USDA94 (2011) (0)
- Site-Specific Recombination System Encoded by Toluene Catabolic Transposon Tn 4651 (2002) (0)
- Genome evolution related to γ-hexachlorocyclohexane metabolic function in the soil microbial population. (2022) (0)
- Compounds that enhance the tailing activity of Moloney murine leukemia virus reverse transcriptase (2017) (0)
- Crystal structure of haloalkane dehalogenase LinB H247A mutant from Sphingobium sp. MI1205 (2013) (0)
- Semi-Rational Engineering of Haloalkane Dehalogenases DHAATowards Improved Activity with 1,2-Dichloroethane (2008) (0)
- Engineering of Haloalkane Dehalogenase DhaA from Rhodococcus rhodochrous NCIMB 13064 Towards Higher Enantioselectivity (2006) (0)
- 3H09-2 Research of gamma-HCH degradation genes from Sphingomonas sp. MM-1 which is from gamma-HCH contaminated soil in India (2007) (0)
- Strategies to Reveal Genomic Function in Natural Soil Systems (2014) (0)
- Engineering of Enantioselective Haloalkane Dehalogenase by Cumulative Mutagenesis (2006) (0)
- Rapid detection of haloalkane dehalogenase activity bycapillary zone electrophoresis (2000) (0)
- Protein Engineering ofHaloalkane Dehalogenases: Towards theChange of Reaction Mechanism (2008) (0)
- 0605 GenomeMatcher : GUI tool for genomic analysis (2010) (0)
- Biochemical and structural characterization of novel haloalkanedehalogenase DbeA from Bradyrhizobium elkani USDA94 possesingtwo halide binding sites (2010) (0)
- Biodegradation of γ-hexachlorocyclohexane by transgenic hairy root cultures of Cucurbita moschata that accumulate recombinant bacterial LinA (2016) (0)
- Haloalkane dehalogenase from Agrobacterium tumefaciens C58 withnew halide-stabilising residues and unique kinetics (2010) (0)
- Crystallization and Preliminary Crystallographic Analysis of aHaloalkane Dehalogenase DbjA from Bradyrhizobium japonicumUSDA110. (2007) (0)
- P117 APPLICATION OF DEGENERATE OLIGONUCLEOTIDE GENE SHUFFLING FOR CONSTRUCTION OF HYBRID HALOALKANE DEHALOGENASE (2003) (0)
- Crystal structure of the haloalkane dehalogenase DbjA (2005) (0)
- Elucidation on bacterial strategy responding to soil environment by molecular genetics. (2009) (0)
- Design and Evolution of Haloalkane Dehalogenase with Enhanced Conversion of 1,2,3-Trichloropropane by Modification of Access Tunnels (2009) (0)
- A transcriptional regulator, IscR, of Burkholderia multivorans acts as both repressor and activator for transcription of iron-sulfur cluster-biosynthetic isc operon. (2020) (0)
- Comparative Binding Energy (COMBINE) Analysis of the SubstrateSpecificity of Haloalkane Dehalogenase from Bradyrhizobiumjaponicum USDA110. (2007) (0)
- LINB COMPLEXED WITH BUTAN-1-OL (2001) (0)
- Biological Macromolecules ( ICCBM 13 ) . " Development of aCrystallization Protocol for theDbeA 1 Variant ofNovel Haloalkane Dehalogenase from Bradyrhizobium elkani USDA 94 (2010) (0)
- Comparative Binding Energy Analysis of Haloalkane Dehalogenasefrom Bradyrhizobium japonicum USDA110 (2007) (0)
- Mechanism-based Quantitative Structure–Biodegradability Relationships for Hydrolytic Dehalogenation of Chloro- and Bromo-Alkenes: QSAR for Dehalogenation of Haloalkenes (1998) (0)
- COMPLEX OF HYDROLYTIC HALOALKANE DEHALOGENASE LINB FROM SPHINGOMONAS PAUCIMOBILIS UT26 WITH 1,2-PROPANEDIOL (PRODUCT OF DEHALOGENATION OF 1,2-DIBROMOPROPANE) AT 1.85A (2003) (0)
- Title Time-series metagenomic analysis reveals robustness of soilmicrobiome against chemical disturbance (2018) (0)
- Discovery of Stereoselective Haloalkane Dehalogenases: New Toolfor Asymmetric Syntheses. (2006) (0)
- Application of differential scanning fluorimetry to a fusion protein composed of two distinct enzymes (2017) (0)
- Molecular Bases of Enantioselectivity of Haloalkane Dehalogenase DbjA (2011) (0)
- Validation of Putative Enzymes from Genomic Projects:Confirmation of Dehalogenation ARv2ctivity for MycobacterialProtein 579 (2003) (0)
- Conjugative Transfer of IncP-9 Catabolic Plasmids Requires a Previously Uncharacterized Gene, mpfK, Whose Homologs Are Conserved in Various MPFT-Type Plasmids (2019) (0)
- Properties and biotechnological applications of natural and engineered haloalkane dehalogenases (2015) (0)
- Haloalkane Dehalogenases Possess Two Different Structural Bases for Their Enantioselectivity (2007) (0)
- STRUCTURE OF 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE (LINB) FROM SPHINGOMONAS PAUCIMOBILIS COMPLEXED WITH 1,2-DICHLOROPROPANE (2001) (0)
- Hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis UT26 AT 1.6 A resolution (2000) (0)
- Study on microbial degradation of organochlorine pesticide, γ-hexachlorocyclohexane, which causes environmental pollution. (2000) (0)
- Natural and Engineered Enantioselective HaloalkaneDehalogenases (2006) (0)
- Computer-assisted Directed Evolution of Haloalkane DehalogenaseDhaA Towards Degradation of 1,2,3-Trichloropropane (2006) (0)
- STRUCTURE OF LINB COMPLEXED WITH 1,2-DICHLOROETHANE (2001) (0)
- Crystallization and preliminary X-ray diffraction analysis ofhaloalkane dehalogenase LinB from Sphingomonas paucimobilisUT26 (1999) (0)
- Crystal structure of haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94 (2014) (0)
- Growth inhibition by metabolites of gamma-hexachlorocyclohexane in Sphingobium japonicum UT26. (2006) (0)
- Complete Nucleotide Sequence of an Exogenously Isolated Plasmid, pLB1, Involved in (cid:2) -Hexachlorocyclohexane Degradation (cid:1) (2006) (0)
- Crystal structure and site-directed mutagenesis analyses of haloalkane 1 dehalogenase LinB from Sphingobium sp . MI 1205 2 Running title : Structure of LinB from Sphingobium sp (2013) (0)
- Mycobacteria as a Source of Haloalkane Dehalogenases:Identification of the Catalytic Pentad within the Structure ofDhmA from Mycobacterium avium N85. (2006) (0)
- Quantitative Comparison of Binding Sites within the ProteinFamily of Haloalkane Dehalogenases (2008) (0)
- paucimobilis Sphingomonas-Hexachlorocyclohexane in γ Degradation Pathway of Genes Involved in the Downstream Identification and Characterization of (2005) (0)
- Structure of the Rhodococcus haloalkane dehalogenase mutant with enhanced enantioselectivity (2008) (0)
- Sphingomonas paucimobilis-Hexachlorocyclohexane by γ in Degradation of Dehalogenase Gene Whose Product Is Involved 2 , 5-Dichlorohydroquinone Reductive Cloning and Sequencing of a (1998) (0)
- Determination of haloalkane dehalogenase enzymatic activity bycapillary zone electrophoresis (2000) (0)
- Engineering of enantioselective enzyme by cumulativemutagenesis. (2006) (0)
- Organization and dynamism of gamma-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26 genome (2010) (0)
- Expression of Haloalkane Dehalogenase LinB in Pichia pastoris (2006) (0)
- Comparison of Broad-Specificity Haloalkane Dehalogenases DbjAand DmbA Using Multivariate Statistical Approach. (2008) (0)
- M in Pseudomonas paucimobilis . degradation of gamma-hexachlorocyclohexane dehydrogenase gene involved in the 2 , 5-dichloro-2 , 5-cyclohexadiene-1 , 4-diol Cloning and sequencing of a (2003) (0)
- Engineering of the Entrance Tunnel of LinB 52623 (2003) (0)
- Kinetics and enantioselectivity of haloalkane dehalogenase fromAgrobacterium tumefaciens c58 (2010) (0)
- Algorisms used for in silico finishing of bacterial genomes based on short-read assemblage implemented in GenoFinisher, AceFileViewer, and ShortReadManager. (2022) (0)
- Thermodynamic Analysis of Enantioselectivity of HaloalkaneDehalogenase DbjA and its Variants DbjA and DbjA+H139A towardsBrominated Esters and substituted Bromoalkanes (2008) (0)
- Conjugative transfer of naphthalene-catabolic plasmid NAH7 regulated by nitrogen-related phosphotransferase system of recipient cells (2010) (0)
- bacterium, Sphingomonas paucimobilis UT26. gamma-hexachlorocyclohexane-degrading class from a haloalkane dehalogenase of a new substrate Purification and characterization of a (2013) (0)
- Optimization of the packing in the haloalkane dehalogenase crystal by seeding (2010) (0)
- GenomeMatcher: Tool box for efficient genomic analysis. (2010) (0)
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What Schools Are Affiliated With Yuji Nagata?
Yuji Nagata is affiliated with the following schools: