Emma Hodcroft
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Scottish-American epidemiologist
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Why Is Emma Hodcroft Influential?
(Suggest an Edit or Addition)According to Wikipedia, Emma Hodcroft is a British-American molecular epidemiologist at the Institute for Social and Preventive Medicine at the University of Bern. Her research focuses on the phylogenetics of viruses and other pathogens, mapping the spread and evolution of different genetic variants. Hodcroft is a developer on the Nextstrain project, an open science project that tracks the transmission chains of SARS-CoV-2 and other pathogens. In 2020, she originated CoVariants.org, a project tracking SARS-CoV-2 variants.
Emma Hodcroft's Published Works
Published Works
- Genetic Variants of SARS-CoV-2-What Do They Mean? (2021) (464)
- COVID-19 epidemic in Switzerland: on the importance of testing, contact tracing and isolation. (2020) (439)
- Coast-to-Coast Spread of SARS-CoV-2 during the Early Epidemic in the United States (2020) (284)
- Nextclade: clade assignment, mutation calling and quality control for viral genomes (2021) (274)
- Potential impact of seasonal forcing on a SARS-CoV-2 pandemic (2020) (267)
- Automated analysis of phylogenetic clusters (2013) (266)
- Spread of a SARS-CoV-2 variant through Europe in the summer of 2020 (2021) (229)
- Emergence and spread of a SARS-CoV-2 variant through Europe in the summer of 2020 (2020) (222)
- Scientific consensus on the COVID-19 pandemic: we need to act now (2020) (185)
- Cryptic transmission of SARS-CoV-2 in Washington State (2020) (180)
- SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse (2021) (168)
- Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 (2020) (163)
- Multiplex qPCR discriminates variants of concern to enhance global surveillance of SARS-CoV-2 (2021) (146)
- Public health actions to control new SARS-CoV-2 variants (2021) (127)
- Cryptic transmission of SARS-CoV-2 in Washington state (2020) (116)
- Emergence in late 2020 of multiple lineages of SARS-CoV-2 Spike protein variants affecting amino acid position 677 (2021) (115)
- Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus (2022) (111)
- Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens (2021) (75)
- Want to track pandemic variants faster? Fix the bioinformatics bottleneck (2021) (75)
- Preliminary case report on the SARS-CoV-2 cluster in the UK, France, and Spain (2020) (60)
- Identifying Transmission Clusters with Cluster Picker and HIV-TRACE. (2016) (57)
- The Evolution and Biology of SARS-CoV-2 Variants. (2022) (56)
- Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison (2016) (52)
- The Contribution of Viral Genotype to Plasma Viral Set-Point in HIV Infection (2014) (51)
- Transmission of Non-B HIV Subtypes in the United Kingdom Is Increasingly Driven by Large Non-Heterosexual Transmission Clusters (2015) (51)
- Identification of resident memory CD8+ T cells with functional specificity for SARS-CoV-2 in unexposed oropharyngeal lymphoid tissue (2021) (48)
- Transmission of SARS-CoV-2 in domestic cats imposes a narrow bottleneck (2021) (45)
- PCR assay to enhance global surveillance for SARS-CoV-2 variants of concern (2021) (41)
- Coast-to-coast spread of SARS-CoV-2 in the United States revealed by genomic epidemiology (2020) (35)
- Non-disclosed men who have sex with men in UK HIV transmission networks: phylogenetic analysis of surveillance data. (2018) (31)
- Genomic analysis of nCoV spread. Situation report 2020-01-23. (2020) (27)
- Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic (2016) (26)
- Co-circulation of multiple enterovirus D68 subclades, including a novel B3 cluster, across Europe in a season of expected low prevalence, 2019/20 (2020) (26)
- Emergence of an early SARS-CoV-2 epidemic in the United States (2021) (26)
- A tale of two variants: Spread of SARS-CoV-2 variants Alpha in Geneva, Switzerland, and Beta in South Africa (2021) (22)
- The PHA4GE SARS-CoV-2 Contextual Data Specification for Open Genomic Epidemiology (2020) (19)
- Intra- and interpatient evolution of enterovirus D68 analyzed by whole-genome deep sequencing (2018) (17)
- A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland (2016) (16)
- SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021—Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing (2021) (16)
- Interactions between seasonal human coronaviruses and implications for the SARS-CoV-2 pandemic: A retrospective study in Stockholm, Sweden, 2009-2020 (2020) (14)
- Quantifying SARS-CoV-2 spread in Switzerland based on genomic sequencing data (2020) (14)
- Emergence of an early SARS-CoV-2 epidemic in the United States (2021) (13)
- Understanding disclosed and cryptic HIV transmission risk via genetic analysis: what are we missing and when does it matter? (2019) (9)
- Molecular Epidemiology and Evolutionary Trajectory of Emerging Echovirus 30, Europe (2021) (9)
- Pervasive and non-random recombination in near full-length HIV genomes from Uganda (2020) (8)
- Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package (2022) (7)
- Evolution, geographic spreading, and demographic distribution of Enterovirus D68 (2020) (6)
- Impact of seasonal forcing on a potential SARS-CoV-2 pandemic (2020) (5)
- Estimating the heritability of virulence in HIV (2015) (5)
- Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data (2021) (4)
- Sharing, synthesis and sustainability of data analysis for epidemic preparedness in Europe (2021) (4)
- Clonality, genetic variation, and the origin of isolated western populations of the carnivorous plant, Sarracenia alata1 (2014) (3)
- High-resolution influenza mapping of a city reveals socioeconomic determinants of transmission within and between urban quarters (2020) (2)
- Comprehensive analysis of intra- and interpatient evolution of enterovirus D68 by whole-genome deep sequencing (2018) (1)
- The International Virus Bioinformatics Meeting 2022 (2022) (1)
- Automated analysis of phylogenetic clusters (2013) (1)
- Edinburgh Research Explorer Transmission of non-B HIV subtypes in the UK is increasingly driven by large non-heterosexual clusters (2016) (1)
- Genetic diversity and evolutionary dynamics of respiratory syncytial virus over eleven consecutive years of surveillance in Senegal. (2021) (1)
- Importation of Alpha and Delta variants during the SARS-CoV-2 epidemic in Switzerland: phylogenetic analysis and intervention scenarios (2023) (0)
- Functional SARS-CoV-2 cross-reactive CD4+ T cells established in early childhood decline with age (2023) (0)
- OP-MOLB160219 185..203 (2016) (0)
- From alpha to omicron: how variants shaped sars-cov-2 school transmission (2023) (0)
- Improvement in phylogeny reconstruction through use of simulated genome data (2016) (0)
- Impact of cross-border-associated cases on the SARS-CoV-2 epidemic in Switzerland during summer 2020 and 2021 (2022) (0)
- A Call for Practical Phylogenetics for Public Health (2021) (0)
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What Schools Are Affiliated With Emma Hodcroft?
Emma Hodcroft is affiliated with the following schools: