Janet Kelso
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South African bioinformatician
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Janet Kelsobiology Degrees
Biology
#1646
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#2699
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Bioinformatics
#42
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#42
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Computational Biology
#45
World Rank
#45
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Biology
Janet Kelso's Degrees
- Bachelors Biochemistry University of Cape Town
- Masters Bioinformatics University of Pretoria
Why Is Janet Kelso Influential?
(Suggest an Edit or Addition)According to Wikipedia, Janet Kelso is a South African computational biologist and Group leader of the Minerva Research Group for Bioinformatics at the Max Planck Institute for Evolutionary Anthropology. She is best known for her work comparing DNA from previous humans with those of the present .
Janet Kelso's Published Works
Published Works
- A Draft Sequence of the Neandertal Genome (2010) (3419)
- The complete genome sequence of a Neandertal from the Altai Mountains (2013) (1644)
- A High-Coverage Genome Sequence from an Archaic Denisovan Individual (2012) (1587)
- Genetic history of an archaic hominin group from Denisova Cave in Siberia (2010) (1503)
- Ancient human genomes suggest three ancestral populations for present-day Europeans (2013) (1082)
- The Simons Genome Diversity Project: 300 genomes from 142 diverse populations (2016) (1009)
- Deep proteome and transcriptome mapping of a human cancer cell line (2011) (935)
- Genome sequence of a 45,000-year-old modern human from western Siberia (2014) (768)
- Patterns of damage in genomic DNA sequences from a Neandertal (2007) (743)
- The genetic history of Ice Age Europe (2016) (678)
- High‐throughput DNA sequencing – concepts and limitations (2010) (610)
- An early modern human from Romania with a recent Neanderthal ancestor (2015) (544)
- A Complete Neandertal Mitochondrial Genome Sequence Determined by High-Throughput Sequencing (2008) (539)
- The landscape of Neandertal ancestry in present-day humans (2014) (464)
- DNA analysis of an early modern human from Tianyuan Cave, China (2013) (458)
- The bonobo genome compared with the chimpanzee and human genomes (2012) (455)
- Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion (2015) (454)
- Sequence variants in SLC16A11 are a common risk factor for type 2 diabetes in Mexico (2013) (419)
- A high-coverage Neandertal genome from Vindija Cave in Croatia (2017) (410)
- Nuclear DNA sequences from the Middle Pleistocene Sima de los Huesos hominins (2016) (389)
- Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals (2016) (362)
- Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones (2004) (346)
- Transcriptional neoteny in the human brain (2009) (330)
- Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations (2016) (325)
- The genome of the offspring of a Neandertal mother and a Denisovan father (2018) (280)
- Improved base calling for the Illumina Genome Analyzer using machine learning strategies (2009) (280)
- Schmutzi: estimation of contamination and endogenous mitochondrial consensus calling for ancient DNA (2015) (261)
- Neandertal and Denisovan DNA from Pleistocene sediments (2017) (245)
- Integration of text- and data-mining using ontologies successfully selects disease gene candidates (2005) (233)
- Patterns of coding variation in the complete exomes of three Neandertals (2014) (207)
- Palaeoproteomic evidence identifies archaic hominins associated with the Châtelperronian at the Grotte du Renne (2016) (201)
- PatMaN: rapid alignment of short sequences to large databases (2008) (199)
- A recent evolutionary change affects a regulatory element in the human FOXP2 gene. (2013) (196)
- Introgression of Neandertal- and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Toll-like Receptors (2016) (196)
- Reconstructing the DNA Methylation Maps of the Neandertal and the Denisovan (2014) (192)
- leeHom: adaptor trimming and merging for Illumina sequencing reads (2014) (187)
- Transcriptome Analysis of Mouse Stem Cells and Early Embryos (2003) (183)
- eVOC: a controlled vocabulary for unifying gene expression data. (2003) (178)
- The earliest transcribed zygotic genes are short, newly evolved, and different across species. (2014) (176)
- Reconstructing the Genetic History of Late Neandertals (2018) (170)
- deML: robust demultiplexing of Illumina sequences using a likelihood-based approach (2014) (158)
- Nuclear and mitochondrial DNA sequences from two Denisovan individuals (2015) (150)
- 40,000-Year-Old Individual from Asia Provides Insight into Early Population Structure in Eurasia (2017) (141)
- Addressing challenges in the production and analysis of illumina sequencing data (2011) (138)
- Limits of long-term selection against Neandertal introgression (2019) (128)
- Age estimates for hominin fossils and the onset of the Upper Palaeolithic at Denisova Cave (2019) (122)
- A high-coverage Neandertal genome from Chagyrskaya Cave (2020) (119)
- The Contribution of Neanderthals to Phenotypic Variation in Modern Humans (2017) (118)
- The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags (2003) (115)
- Identifying genes underlying skin pigmentation differences among human populations (2006) (115)
- Computational challenges in the analysis of ancient DNA (2010) (109)
- freeIbis: an efficient basecaller with calibrated quality scores for Illumina sequencers (2013) (89)
- Identification and Analysis of Genomic Regions with Large Between‐Population Differentiation in Humans (2007) (85)
- Functionality of Intergenic Transcription: An Evolutionary Comparison (2006) (85)
- Individual A High-Coverage Genome Sequence from an Archaic Denisovan (2012) (82)
- Ancient Fennoscandian genomes reveal origin and spread of Siberian ancestry in Europe (2018) (81)
- Comparison of Protein and mRNA Expression Evolution in Humans and Chimpanzees (2007) (79)
- Neanderthal ancestry drives evolution of lipid catabolism in contemporary Europeans (2014) (78)
- Impact of the presence of paralogs on sequence divergence in a set of mouse-human orthologs. (2002) (77)
- admixr—R package for reproducible analyses using ADMIXTOOLS (2019) (76)
- Neandertal Introgression Sheds Light on Modern Human Endocranial Globularity (2018) (74)
- Towards BioDBcore: a community-defined information specification for biological databases (2011) (71)
- Functional implications of Neandertal introgression in modern humans (2017) (70)
- Representing default knowledge in biomedical ontologies: application to the integration of anatomy and phenotype ontologies (2007) (70)
- Kiwi genome provides insights into evolution of a nocturnal lifestyle (2015) (69)
- Initial Upper Palaeolithic humans in Europe had recent Neanderthal ancestry (2021) (68)
- RNA-seq analysis identifies different transcriptomic types and developmental trajectories of primary melanomas (2018) (67)
- Relations as patterns: bridging the gap between OBO and OWL (2010) (66)
- Denisovan DNA in Late Pleistocene sediments from Baishiya Karst Cave on the Tibetan Plateau (2020) (64)
- A top-level ontology of functions and its application in the Open Biomedical Ontologies (2006) (64)
- The contribution of exon-skipping events on chromosome 22 to protein coding diversity. (2001) (62)
- Positive selection on gene expression in the human brain (2006) (61)
- A fourth Denisovan individual (2017) (61)
- Towards BioDBcore: a community-defined information specification for biological databases (2010) (57)
- Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set. (2002) (55)
- Unearthing Neanderthal population history using nuclear and mitochondrial DNA from cave sediments (2021) (50)
- Population transcriptomics of life‐history variation in the genus Salmo (2008) (49)
- The evolutionary history of Neanderthal and Denisovan Y chromosomes (2020) (47)
- Allele‐specific transcript isoforms in human (2004) (42)
- GFO-Bio: A biological core ontology (2008) (41)
- Impact of ontology evolution on functional analyses (2012) (40)
- Analysis of Human Accelerated DNA Regions Using Archaic Hominin Genomes (2012) (40)
- Pleistocene sediment DNA reveals hominin and faunal turnovers at Denisova Cave (2021) (40)
- Denisovan ancestry and population history of early East Asians (2020) (39)
- Nuclear DNA from two early Neandertals reveals 80,000 years of genetic continuity in Europe (2019) (37)
- ABAEnrichment: an R package to test for gene set expression enrichment in the adult and developing human brain (2016) (35)
- High‐throughput sequencing of the melanoma genome (2013) (34)
- Transcription Factors Are Targeted by Differentially Expressed miRNAs in Primates (2012) (33)
- BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biology (2009) (31)
- The Neandertal Progesterone Receptor (2020) (30)
- Ancient humans and the origin of modern humans. (2014) (27)
- Genetic Evidence of Human Adaptation to a Cooked Diet (2016) (26)
- A Neanderthal Sodium Channel Increases Pain Sensitivity in Present-Day Humans (2020) (25)
- Applying the functional abnormality ontology pattern to anatomical functions (2010) (25)
- The ontology of biological sequences (2009) (24)
- Reviewer-coerced citation: case report, update on journal policy and suggestions for future prevention (2019) (23)
- A genetic analysis of the Gibraltar Neanderthals (2019) (23)
- Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference (2011) (23)
- SurfaceGenie: a web-based application for prioritizing cell-type-specific marker candidates (2020) (22)
- Ethics of DNA Research on Human Remains: Five Globally Applicable Guidelines (2021) (21)
- The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms (2004) (20)
- Annotation of primate miRNAs by high throughput sequencing of small RNA libraries (2012) (19)
- BOWiki - a Collaborative Annotation and Ontology Curation Framework (2007) (17)
- DATABASE: A new forum for biological databases and curation (2009) (16)
- The genome of the offspring of a Neanderthal mother and a Denisovan father (2018) (16)
- A Proposal for a Gene Functions Wiki (2006) (15)
- A splice variant of the human CCA-adding enzyme with modified activity. (2007) (15)
- Human Stem Cell Resources Are an Inroad to Neandertal DNA Functions (2018) (14)
- Reduced lipolysis in lipoma phenocopies lipid accumulation in obesity (2020) (13)
- Application of eVOC: controlled vocabularies for unifying gene expression data. (2003) (13)
- Neandertal Introgression Sheds Light on Modern Human Endocranial Globularity (2019) (11)
- Detection of Neanderthal Adaptively Introgressed Genetic Variants that Modulate Reporter Gene Expression in Human Immune Cells. (2021) (11)
- Expression signatures of early-stage and advanced medaka melanomas. (2018) (9)
- Genetic insights into the social organization of Neanderthals (2022) (9)
- Statistical Tests for Associations between Two Directed Acyclic Graphs (2010) (9)
- Contributions to the formal ontology of functions and dispositions: an application of non-monotonic reasoning (2009) (9)
- InCoB celebrates its tenth anniversary as first joint conference with ISCB-Asia (2011) (8)
- The earliest Denisovans and their cultural adaptation (2021) (8)
- The limits of long-term selection against Neandertal introgression (2018) (7)
- Ontologies in biology (2010) (7)
- Adaptive variation in human toll-like receptors is contributed by introgression from both Neandertals and Denisovans (2015) (6)
- Lineage-Specific Changes in Biomarkers in Great Apes and Humans (2015) (6)
- ISCB Computational Biology Wikipedia Competition (2013) (6)
- A Visual Representation for Functional Programs (1994) (6)
- Immune Gene Diversity in Archaic and Present-day Humans (2018) (5)
- The design of a wiki-based curation system for the Ontology of Functions (2006) (5)
- From Terms to Categories: Testing the Significance of Co-occurrences between Ontological Categories (2008) (5)
- BOWiki: Ontology-based Semantic Wiki with ABox Reasoning (2008) (5)
- Schmutzi : contamination estimate and endogenous mitochondrial consensus calling for ancient DNA . Additional le 1 (2015) (4)
- Neandertal introgression dissects the genetic landscape of neuropsychiatric disorders and associated behavioral phenotypes (2021) (3)
- OBML – Ontologies in Biomedicine and Life Sciences (2011) (3)
- The evolutionary history of Neandertal and Denisovan Y chromosomes (2020) (3)
- Denisovan Reconstructing the DNA Methylation Maps of the Neandertal and the (2014) (2)
- Paving the future: finding suitable ISMB venues (2012) (2)
- Genomic basis for skin phenotype and cold adaptation in the extinct Steller’s sea cow (2022) (2)
- Neandertal genetic diversity (2014) (2)
- The evolutionary history of human spindle genes includes back-and-forth gene flow with Neandertals (2021) (2)
- Correction: Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones (2004) (2)
- Neandertal introgression partitions the genetic landscape of neuropsychiatric disorders and associated behavioral phenotypes (2022) (2)
- OWLDEF: Integrating OBO and OWL (2010) (2)
- A Formal Ontology of Sequences (2009) (2)
- A novel compound heterozygous leptin receptor mutation causes more severe obesity than in Leprdb/db mice (2021) (2)
- Annotation of primate miRNAs by high throughput sequencing of small RNA libraries (2012) (1)
- Population history of late Neandertals (2017) (1)
- Transcript reconstruction and analysis using STACKdb and stackPACK (2002) (1)
- Ancient human DNA recovered from a Palaeolithic pendant. (2023) (1)
- Sequencing ancient genomes (2013) (1)
- Erratum: Introgression of Neandertal- and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Toll-like Receptors. (2016) (1)
- EST resources, clone sets, and databases (2004) (1)
- rScudo: an R package for classification of molecular profiles using rank-based signatures (2019) (0)
- Computational challenges in the production and analysis of Illumina data (2011) (0)
- Direct Identification of Neanderthal Introgressed Genetic Variation Affecting Gene Expression in Modern Human Immune Cell Lines (2020) (0)
- Title: Detection of Neanderthal Adaptively Introgressed Genetic Variants that Modulate Reporter Gene Expression in Human Immune Cells (2021) (0)
- RNA-Seq analysis of benign melanocytic nevi and primary melanomas (2017) (0)
- Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia (2022) (0)
- Sequencing and analysis of a complete Neandertal mitochondrial genome. (2008) (0)
- Methodchallenges in the analysis of ancient DNA (2010) (0)
- UWE SEIFERT – Commentary : (0)
- Insights from sequencing the Neanderthal genome (2009) (0)
- Neanderthal introgression sheds light on modern human brain globularity (2018) (0)
- Kiwi genome provides insights into evolution of a nocturnal lifestyle (2015) (0)
- Neandertal Introgression S heds Light on Modern Human Endocranial Globularity Highlights (2018) (0)
- Researchthe functional abnormality ontology pattern to anatomical functions (2010) (0)
- Ismb/eccb 2017 Proceedings Papers Committee (2017) (0)
- The earliest Denisovans and their cultural adaptation (2021) (0)
- Schmutzi: estimation of contamination and endogenous mitochondrial consensus calling for ancient DNA (2015) (0)
- ISMB/ECCB 2017 PROCEEDINGS PAPERS COMMITTEE. (2017) (0)
- Balancing selection and adaptive introgression as sources of advantageous genetic diversity in populations (2016) (0)
- Frequency of annotation per ‘eVOC Anatomy Term’ in the EnsMart database (2011) (0)
- What we have learned from Neanderthals about genes involved in energy metabolism and adiposity (2016) (0)
- Deepproteomeandtranscriptomemappingofahuman cancer cell line (2011) (0)
- Paleoepigenetics : Reconstructing the DNA methylation maps of archaic hominins (2013) (0)
- Denisova 11: The daughter of a Neandertal and a Denisovan (2018) (0)
- HiGwas: how to compute longitudinal GWAS data in population designs (2020) (0)
- Lasting effects of Neandertal DNA on gene expression in modern humans (2021) (0)
- Ancient Fennoscandian genomes reveal origin and spread of Siberian ancestry in Europe (2018) (0)
- Methods, Models & Techniques High-throughput DNA sequencing - concepts and limitations (2010) (0)
- Age estimates for hominin fossils and the onset of the Upper Palaeolithic at Denisova Cave (2019) (0)
- The application of an ontology design pattern for functional abnormalities to phenotype ontologies and the extraction of an ontology of anatomical functions (2009) (0)
- Functional implications of Neandertal introgression in modern humans (2017) (0)
- ISMB 2008 Organization (2008) (0)
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