Koichiro Tamura
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Computer Science
Koichiro Tamura's Degrees
- PhD Computer Science University of Tokyo
- Masters Computer Science University of Tokyo
- Bachelors Computer Science University of Tokyo
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(Suggest an Edit or Addition)Koichiro Tamura's Published Works
Published Works
- MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. (2011) (39863)
- MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. (2013) (36769)
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. (2016) (32829)
- MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. (2007) (29050)
- MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. (2018) (20227)
- MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment (2004) (12239)
- Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. (1993) (10165)
- MEGA2: molecular evolutionary genetics analysis software (2001) (6300)
- Prospects for inferring very large phylogenies by using the neighbor-joining method. (2004) (4560)
- MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences (2008) (3327)
- MEGA11: Molecular Evolutionary Genetics Analysis Version 11 (2021) (2391)
- Molecular Evolutionary Genetics Analysis (2007) (1926)
- Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases. (1992) (1799)
- Evolutionary Genetics Analysis Version 6 . 0 (2013) (1557)
- MEGA: Molecular Evolutionary Genetics Analysis, Version 1.02. (1995) (1145)
- MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers (1994) (1029)
- Molecular Evolutionary Genetics Analysis (MEGA) for macOS. (2020) (799)
- POPTREE2: Software for constructing population trees from allele frequency data and computing other population statistics with Windows interface. (2010) (612)
- Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks. (2003) (591)
- Estimating divergence times in large molecular phylogenies (2012) (483)
- MEGA-CC: computing core of molecular evolutionary genetics analysis program for automated and iterative data analysis (2012) (278)
- Evolutionary distance estimation under heterogeneous substitution pattern among lineages. (2002) (262)
- Statistics and truth in phylogenomics. (2012) (231)
- Replication Origin of Mitochondrial DNA in Insects (2005) (221)
- Model selection in the estimation of the number of nucleotide substitutions. (1994) (168)
- Molecular Evolutionary Genetic Analysis (2000) (160)
- POPTREEW: web version of POPTREE for constructing population trees from allele frequency data and computing some other quantities. (2014) (153)
- Deciphering the Routes of invasion of Drosophila suzukii by Means of ABC Random Forest (2017) (140)
- Theoretical Foundation of the RelTime Method for Estimating Divergence Times from Variable Evolutionary Rates (2017) (110)
- PCR Error and Molecular Population Genetics (1999) (83)
- Self-splicing group I introns in eukaryotic viruses (1994) (73)
- Phylogeny of the Drosophila immigrans Species Group (Diptera: Drosophilidae) Based on Adh and Gpdh Sequences (2007) (72)
- The rate and pattern of nucleotide substitution in Drosophila mitochondrial DNA. (1992) (72)
- Rapid isolation method of animal mitochondrial DNA by the alkaline lysis procedure (1988) (57)
- Prospects for building large timetrees using molecular data with incomplete gene coverage among species. (2014) (45)
- Rapid isolation method of animal mitochondrial DNA by the alkaline lysis procedure (1988) (45)
- [Water-soluble eumelanin as a PCR-inhibitor and a simple method for its removal]. (1993) (44)
- Fast and Accurate Estimates of Divergence Times from Big Data (2017) (43)
- A perennial ryegrass CBF gene cluster is located in a region predicted by conserved synteny between Poaceae species (2006) (43)
- MEGA: Integrated software for molecular evolutionary genetics analysis and sequence alignment briefings in bioinformatics. (2004) (40)
- Expression of the gene encoding a translational elongation factor 3 homolog of Chlorella virus CVK2. (1993) (40)
- Locating Functional Errors in Logic Circuits (1989) (39)
- A Machine Learning Method for Detecting Autocorrelation of Evolutionary Rates in Large Phylogenies (2019) (37)
- MEGA-MD: molecular evolutionary genetics analysis software with mutational diagnosis of amino acid variation (2014) (34)
- Single column discrepancy and dynamic max-mini optimizations for quickly finding the most parsimonious evolutionary trees (2000) (34)
- Molecular Phylogeny of Twelve Asian Species of Epilachnine Ladybird Beetles (Coleoptera, Coccinellidae) with Notes on the Direction of Host Shifts (1998) (34)
- Determination of the complete nucleotide sequence and haplotypes in the D-loop region of the mitochondrial genome in the oriental white stork, Ciconia boyciana. (2000) (30)
- A parallel execution model of logic programs (1983) (30)
- Reliable Confidence Intervals for RelTime Estimates of Evolutionary Divergence Times (2019) (25)
- Two Cryptic Species of the Phytophagous Ladybird Beetle Epilachna vigintioctopunctata (Coleoptera: Coccinellidae) Detected by Analyses of Mitochondrial DNA and Karyotypes, and Crossing Experiments (2000) (24)
- Phylogenetic relationships between Sophophora and Lordiphosa, with proposition of a hypothesis on the vicariant divergences of tropical lineages between the Old and New Worlds in the family Drosophilidae. (2011) (23)
- On the estimation of the rate of nucleotide substitution for the control region of human mitochondrial DNA. (2000) (21)
- Phylogenetic placement of metagenomic reads using the minimum evolution principle (2015) (21)
- RelTime Relaxes the Strict Molecular Clock throughout the Phylogeny (2017) (20)
- A Novel Chimeric Gene, siren, With Retroposed Promoter Sequence in the Drosophila bipectinata Complex (2005) (20)
- [Presence of a PCR-inhibitor in hairs]. (1992) (18)
- A Molecular Evolutionary Reference for the Human Variome. (2016) (17)
- Evidence for a role of free radicals by synthesized scavenger, 2-octadecylascorbic acid, in cerulein-induced mouse acute pancreatitis (1992) (15)
- A new method for inferring timetrees from temporally sampled molecular sequences (2019) (14)
- Polymorphism and structure of style–specific arabinogalactan proteins as determinants of pollen tube growth in Nicotiana (2017) (14)
- Adaptive Landscape of Protein Variation in Human Exomes (2018) (10)
- Ancient Male Recombination Shaped Genetic Diversity of Neo-Y Chromosome in Drosophila albomicans. (2016) (10)
- Cold tolerance and metabolic rate increased by cold acclimation in Drosophila albomicans from natural populations. (2013) (10)
- Mitochondrial DNA polymorphisms in the two subspecies of Drosophila sulfurigaster: relationship between geographic structure of population and nucleotide diversity. (1991) (10)
- Phylogenetic Position of the Subgenus Lordiphosa of the Genus Drosophila (Diptera: Drosophilidae) Inferred from Alcohol Dehydrogenase (Adh) Gene Sequences (2000) (10)
- Efficient Methods for Dating Evolutionary Divergences (2020) (9)
- Semi-automated quantitative Drosophila wings measurements (2017) (9)
- Molecular population genetics of a host-associated sibling species complex of phytophagous ladybird beetles (Coleoptera: Coccinellidae: Epilachninae) (2011) (8)
- Comprehensive identification of odorant-binding protein genes in the seed fly, Delia platura (Diptera: Anthomyiidae) (2015) (7)
- PCR inhibitor: water-soluble melanin, which inhibits DNA polymerases and DNases (1994) (7)
- Effects of Percutaneous Transhepatic Biliary Drainage on Blood‐Bile Permeability and Selective IgA Transport in Patients with Biliary Obstructions (1990) (6)
- Population genetic analysis of two species of Distylium: D. racemosum growing in East Asian evergreen broad-leaved forests and D. lepidotum endemic to the Ogasawara (Bonin) Islands (2019) (5)
- Inferring the demographic history of Japanese cedar, Cryptomeria japonica, using amplicon sequencing (2019) (5)
- Model for Evaluation of Stock Values by Ensemble Model Using Deep Learning (2018) (5)
- Shared evolutionary trajectories of three independent neo-sex chromosomes in Drosophila (2021) (5)
- Stable Transmission of Dirofilaria repens Nematodes, Northern Germany (2014) (5)
- Extensive Differences in Antifungal Immune Response in Two Drosophila Species Revealed by Comparative Transcriptome Analysis (2013) (5)
- Identification of odorant-binding protein genes expressed in the antennae and the legs of the onion fly, Delia antiqua (Diptera: Anthomyiidae) (2014) (5)
- Next generation methods and tools for timing the evolution of species and strains (2014) (4)
- A new method for detecting autocorrelation of evolutionary rates in large phylogenies (2018) (4)
- Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Unusual evolution of interspersed repeat sequences in the Drosophila ananassae subgroup. (2006) (4)
- PathFinder: Bayesian inference of clone migration histories in cancer. (2020) (4)
- Application of AMP Collectors in Nairobi CBD for Transport Planning (2018) (3)
- Phylogenetic Relationships among Populations of Vollenhovia Ants, with Particular Focus on the Evolution of Wing Morphology (2012) (3)
- PathFinder: Bayesian inference of clone migration histories in cancer (2020) (3)
- Status of chloroquine efficacy against Plasmodium falciparum in pregnant women in a tribal area of central India (2001) (3)
- Horizontal transmission of group-I ribozymes: viruses as a carrier of the introns. (1995) (3)
- New processor interconnection strategies for a large multi-processor system (1982) (2)
- Activation of DNA Transposons and Evolution of piRNA Genes Through Interspecific Hybridization in Xenopus Frogs (2022) (2)
- Phylogenetic placement of metagenomic reads using the minimum evolution principle (2015) (1)
- Efficient Methods for Dating Evolutionary Divergences 12 (2021) (1)
- Porch Placemaking. How In-between Spaces Work During and After the COVID-19 Pandemic (2020) (1)
- Polymorphism and structure of style–specific arabinogalactan proteins as determinants of pollen tube growth in Nicotiana (2017) (0)
- Adaptive landscape of protein variation in human (2018) (0)
- Comprehensive identification of odorant-binding protein genes in the seed fly, Delia platura (Diptera: Anthomyiidae) (2015) (0)
- Molecular phylogenetic analysis of the Drosophila immigrans species group(Taxonomy and Systematics)(Proceedings of the Sixty-Ninth Annual Meeting of the Zoological Society of Japan) : (1998) (0)
- Molecular phylogenetic study of the virilis-repleta radiation (1997) (0)
- Semi-automated quantitative Drosophila wings measurements (2017) (0)
- M olecular B iology and E volution (2013) (0)
- Regionalization and Cross-Border Transport (2010) (0)
- Verification of image recognition AI system for rebar arrangement inspection (2020) (0)
- Effectiveness of Rural Road Improvement Using the “ Do-nou ” Method in Developing Countries : Economic Analysis with RED Model (2011) (0)
- EFFECT OF TOTAL RESECTION OF SMALL INTESTINE ON GASTRIN-RELEASING PEPTIDE (GRP)-STIMULATED PANCREATIC SECRETION IN ANESTHETIZED RABBITS (1989) (0)
- Identification of odorant-binding protein genes expressed in the antennae and the legs of the onion fly, Delia antiqua (Diptera: Anthomyiidae) (2013) (0)
- Self-splicing groupIintrons ineukaryotic viruses (1994) (0)
- General remarks on the achievements of the national R&D program 'high speed computing system for scientific and technological uses' (1992) (0)
- Modeling and Analysis of Effects on Financial Markets from Influence Relationships in Social Media. (2020) (0)
- Los Sitios: Connecting People to People Assets A Conceptual Framework for Civic Engagement to Facilitate Sustainable Development in Los Sitios, La Habana, Cuba (0)
- Skeleton Phylogeny Reconstructed with Transcriptomes for the Tribe Drosophilini (Diptera: Drosophilidae) (2023) (0)
- Research Results of the Project "high Speed Computing System for Scientific and Technological Uses" (1991) (0)
- A Method for Measuring Lengths of Tilapia mossambica by Videotape Techniques (1982) (0)
- Instructions for use Title Phylogeny of the Drosophila immigrans species group ( Diptera : Drosophilidae ) based on Adh andGpdh sequences Author ( s ) (2017) (0)
- Abstracts of selected papers presented at the 76th General Meeting of the Japanese Society of Gastroenterology March 29–31, 1990, Tokyo, Japan (2007) (0)
- Twitter Actuates the Cryptocurrency Market (2018) (0)
- IS THE SUBGENUS SOPHOPHORA MONOHYLETIC? : EFFECT OF G+C CONTENT ON THE PHYLOGENETIC RECONSTRUCTION(Taxonomy and Systematics)(Proceedings of the Seventieth Annual Meeting of the Zoological Society of Japan) (1999) (0)
- Inferring the demographic history of Japanese cedar, Cryptomeria japonica, using amplicon sequencing (2019) (0)
- RATE AND PATTERN OF NUCLEOTIDE SUBSTITUTION IN THE CONTROL REGION OF MITOCHONDRIAL DNA IN HUMANS (1995) (0)
- Cichlid Evolution Workshop 2003 in Karuizawa (2003) (0)
- WWC and the Hyper Information Age (1998) (0)
- Logic and Function (1982) (0)
- Next generation methods and tools for timing the evolution of species and strains (2014) (0)
- Abstracts of selected papers presented at the 34th annual meeting of the Japanese Society of Gastroenterology October 12–14, 1992, Utsunomiya, Japan (1993) (0)
- CHANGES OF PANCREATIC ENDOCRINE AND EXOCRINE CELLS AND PORTAL CHOLECYSTOKININAND SECRETIN LEVELS AFTER PARTIAL HEPATECTOMY IN DOGS (1988) (0)
- Regionalization and Cross-Border Transport -Empirical Study on Thailand and Malaysia (2009) (0)
- Prediction of directional changes of influenza virus genome sequences using by a novel bioinformatics strategy (2011) (0)
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Koichiro Tamura is affiliated with the following schools: