Arup Chakraborty

Q: What Schools Are Affiliated With Arup Chakraborty

Arup Chakraborty is affiliated with the following schools: New York University, Bar-Ilan University, Washington University in St. Louis, University of California, Berkeley, University of Delaware, University of Minnesota, Delaware State University, Massachusetts Institute of Technology, University of Geneva

Arup Chakraborty's AcademicInfluence.com Rankings

Arup Chakraborty

Engineering

#2326

World Rank

#3218

Historical Rank

#777

USA Rank

Applied Physics

#1950

World Rank

#1985

Historical Rank

#194

USA Rank

engineering Degrees

Download Badge

Engineering

Arup Chakraborty's Degrees

PhD Chemical Engineering University of Delaware
Masters Chemical Engineering University of Delaware

Why Is Arup Chakraborty Influential?

(Suggest an Edit or Addition)

According to Wikipedia, Arup K. Chakraborty is an American engineer, focusing in biophysics, computational modeling and infectious disease, currently the Robert T. Haslam Professor at Massachusetts Institute of Technology and formerly the Warren and Katherine Schlinger Distinguished Professor at University of California, Berkeley.

(See a Problem?)

Arup Chakraborty's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Advances in methods and algorithms in a modern quantum chemistry program package. (2006) (2045)
Coactivator condensation at super-enhancers links phase separation and gene control (2018) (1303)
A Phase Separation Model for Transcriptional Control (2017) (1072)
Therapeutic Efficacy of Potent Neutralizing HIV-1-Specific Monoclonal Antibodies in SHIV-Infected Rhesus Monkeys (2013) (610)
The Immunological Synapse Balances T Cell Receptor Signaling and Degradation (2003) (592)
Origin of nanomechanical cantilever motion generated from biomolecular interactions. (2001) (409)
T cell sensing of antigen dose governs interactive behavior with dendritic cells and sets a threshold for T cell activation (2008) (405)
Polyreactivity increases the apparent affinity of anti-HIV antibodies by heteroligation (2010) (392)
Digital Signaling and Hysteresis Characterize Ras Activation in Lymphoid Cells (2009) (384)
Synaptic pattern formation during cellular recognition (2001) (328)
Effects of thymic selection of the T cell repertoire on HLA-class I associated control of HIV infection (2010) (296)
Insights into the initiation of TCR signaling (2014) (288)
Enhanced clearance of HIV-1–infected cells by broadly neutralizing antibodies against HIV-1 in vivo (2016) (287)
A growing string method for determining transition states: comparison to the nudged elastic band and string methods. (2004) (281)
CD4 enhances T cell sensitivity to antigen by coordinating Lck accumulation at the immunological synapse (2004) (257)
Sustained antigen availability during germinal center initiation enhances antibody responses to vaccination (2016) (227)
Enhancer features that drive formation of transcriptional condensates (2018) (222)
Understanding the structure and function of the immunological synapse. (2010) (214)
Automatic Classification of Cellular Expression by Nonlinear Stochastic Embedding (ACCENSE) (2013) (214)
Translating HIV sequences into quantitative fitness landscapes predicts viral vulnerabilities for rational immunogen design. (2013) (209)
Magnitude and Kinetics of CD8+ T Cell Activation during Hyperacute HIV Infection Impact Viral Set Point. (2015) (207)
CD4 and CD8 binding to MHC molecules primarily acts to enhance Lck delivery (2010) (204)
CO2 absorption in aqueous solutions of hindered amines (1986) (201)
Coordinate linkage of HIV evolution reveals regions of immunological vulnerability (2011) (199)
RNA-Mediated Feedback Control of Transcriptional Condensates (2020) (192)
Partitioning of cancer therapeutics in nuclear condensates (2020) (187)
The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies (2013) (181)
Directed Migration of Positively Selected Thymocytes Visualized in Real Time (2005) (164)
Paired quantitative and qualitative assessment of the replication-competent HIV-1 reservoir and comparison with integrated proviral DNA (2016) (154)
Macromolecules at Surfaces: Research Challenges and Opportunities from Tribology to Biology (2003) (154)
Manipulating the selection forces during affinity maturation to generate cross-reactive HIV antibodies (2015) (151)
Nanomechanical Forces Generated by Surface Grafted DNA (2002) (147)
The balance between T cell receptor signaling and degradation at the center of the immunological synapse is determined by antigen quality. (2008) (144)
Coreceptor Scanning by the T Cell Receptor Provides a Mechanism for T Cell Tolerance (2014) (142)
The impact of negative selection on thymocyte migration in the medulla (2009) (141)
Fast on-rates allow short dwell time ligands to activate T cells (2010) (138)
Layered Cathode Materials for Lithium-Ion Batteries: Review of Computational Studies on LiNi1–x–yCoxMnyO2 and LiNi1–x–yCoxAlyO2 (2020) (129)
The Fitness Landscape of HIV-1 Gag: Advanced Modeling Approaches and Validation of Model Predictions by In Vitro Testing (2014) (120)
How the thymus designs antigen-specific and self-tolerant T cell receptor sequences (2008) (111)
Purely stochastic binary decisions in cell signaling models without underlying deterministic bistabilities (2007) (110)
Hydrophobic CDR3 residues promote the development of self-reactive T cells (2016) (110)
Chemomechanics of surface stresses induced by DNA hybridization. (2006) (108)
Electrochemical Impedance Spectroscopy of Oxygen Reduction Reaction (ORR) in a Rotating Disk Electrode Configuration: Effect of Ionomer Content and Carbon-Support (2015) (108)
Ras activation by SOS: Allosteric regulation by altered fluctuation dynamics (2014) (107)
Hybridization dynamics of surface immobilized DNA. (2004) (103)
Atomistic understanding of kinetic pathways for single base-pair binding and unbinding in DNA (2003) (102)
Density Functional Theory Study of Proton Mobility in Zeolites: Proton Migration and Hydrogen Exchange in ZSM-5 (2000) (102)
Segment Level Chemistry and Chain Conformation in the Reactive Adsorption of Poly(methyl methacrylate) on Aluminum Oxide Surfaces (1992) (100)
Relative rate and location of intra-host HIV evolution to evade cellular immunity are predictable (2016) (100)
The stimulatory potency of T cell antigens is influenced by the formation of the immunological synapse. (2007) (97)
Molecular orbital approach to substituent effects in amine-CO2 interactions (1988) (90)
Evolving concepts of specificity in immune reactions (2010) (87)
Fitness landscape of the human immunodeficiency virus envelope protein that is targeted by antibodies (2018) (87)
The effects of local structural relaxation on aluminum siting within H-ZSM-5 (1991) (85)
Continuous immunotypes describe human immune variation and predict diverse responses (2017) (85)
Al Next Nearest Neighbor, Ring Occupation, and Proximity Statistics in ZSM-5 (1999) (81)
Predicting accurate cathode properties of layered oxide materials using the SCAN meta-GGA density functional (2018) (79)
Scaffold proteins confer diverse regulatory properties to protein kinase cascades (2007) (78)
Deconstruction of the Ras switching cycle through saturation mutagenesis (2017) (78)
Density Functional Theory Study of Nitrous Oxide Decomposition over Fe- and Co-ZSM-5 (2002) (78)
Simulation of biomimetic recognition between polymers and surfaces. (1999) (77)
Theoretical Studies of the Coordination and Stability of Divalent Cations in ZSM-5 (2000) (76)
Understanding the Role of Minor Molybdenum Doping in LiNi0.5Co0.2Mn0.3O2 Electrodes: from Structural and Surface Analyses and Theoretical Modeling to Practical Electrochemical Cells. (2018) (75)
Density of States, Carrier Concentration, and Flat Band Potential Derived from Electrochemical Impedance Measurements of N-Doped Carbon and Their Influence on Electrocatalysis of Oxygen Reduction Reaction (2017) (72)
Efficient stochastic simulation of reaction–diffusion processes via direct compilation (2009) (72)
Correlation of a dynamic model for immunological synapse formation with effector functions: two pathways to synapse formation. (2002) (71)
Origin of the sharp boundary that discriminates positive and negative selection of thymocytes (2009) (70)
Spin models inferred from patient-derived viral sequence data faithfully describe HIV fitness landscapes. (2013) (69)
How Antigen Quantity and Quality Determine T-Cell Decisions in Lymphoid Tissue (2008) (66)
In silico models for cellular and molecular immunology: successes, promises and challenges (2003) (66)
Decreased Diacylglycerol Metabolism Enhances ERK Activation and Augments CD8+ T Cell Functional Responses* (2010) (63)
Pairing computation with experimentation: a powerful coupling for understanding T cell signalling (2010) (63)
Quorum sensing allows T cells to discriminate between self and nonself (2013) (62)
Density Functional Theory Calculations of the Oxidative Dehydrogenation of Propane on the (010) Surface of V2O5 (2000) (60)
Effect of topology and molecular occupancy on self-diffusion in lattice models of zeolites—Monte-Carlo simulations (1998) (60)
Improving Performance of LiNi0.8Co0.1Mn0.1O2 Cathode Materials for Lithium-Ion Batteries by Doping with Molybdenum-Ions: Theoretical and Experimental Studies (2019) (60)
A Model for Genetic and Epigenetic Regulatory Networks Identifies Rare Pathways for Transcription Factor Induced Pluripotency (2010) (59)
Polymer adsorption-driven self-assembly of nanostructures. (2001) (58)
Site Availability and Competitive Siting of Divalent Metal Cations in ZSM-5 (2000) (57)
Dynamic Monte-Carlo and mean-field study of the effect of strong adsorption sites on self-diffusion in zeolites (1999) (56)
Empty Class II Major Histocompatibility Complex Created by Peptide Photolysis Establishes the Role of DM in Peptide Association* (2007) (55)
Sensitivity of T cells to antigen and antagonism emerges from differential regulation of the same molecular signaling module (2007) (55)
Role of framework mutations and antibody flexibility in the evolution of broadly neutralizing antibodies (2018) (55)
Monovalent engagement of the BCR activates ovalbumin-specific transnuclear B cells (2014) (54)
CD45 functions as a signaling gatekeeper in T cells (2019) (54)
Density functional theory study of benzene oxidation over Fe-ZSM-5 (2003) (54)
Theory, models and biology (2015) (53)
Molecular flexibility can influence the stimulatory ability of receptor-ligand interactions at cell-cell junctions. (2006) (50)
Optimal immunization cocktails can promote induction of broadly neutralizing Abs against highly mutable pathogens (2016) (47)
Influence of nitrogen-doping in carbon on equivalent distributed resistance and capacitance – Implications to electrocatalysis of oxygen reduction reaction (2017) (46)
Thymic selection of T-cell receptors as an extreme value problem. (2009) (46)
A density functional theory study of the effects of metal cations on the Brøsted acidity of H-ZSM-5 (1998) (46)
In Vivo Imaging of T Cell Priming (2008) (45)
Surface‐induced ordering for confined random block copolymers (1994) (45)
The catalytic activity of the kinase ZAP-70 mediates basal signaling and negative feedback of the T cell receptor pathway (2015) (45)
Disordered heteropolymers: models for biomimetic polymers and polymers with frustrating quenched disorder (2001) (44)
Dysregulated RasGRP1 Responds to Cytokine Receptor Input in T Cell Leukemogenesis (2013) (43)
Hydrogen Interaction (Electrosorption and Evolution) Characteristics of Pd and Pd3Co Alloy Nanoparticles: An In-situ Investigation with Electrochemical Impedance Spectroscopy (2016) (42)
Diffusion and reaction in ZSM-5 studied by dynamic Monte Carlo (1997) (42)
Low T cell receptor expression and thermal fluctuations contribute to formation of dynamic multifocal synapses in thymocytes (2003) (41)
A density functional theory study of hydrogen recombination and hydrogen-deuterium exchange on Ga/H-ZSM-5 (1999) (40)
Phase segregation on different length scales in a model cell membrane system. (2005) (40)
The membrane environment can promote or suppress bistability in cell signaling networks. (2012) (39)
Electronic Structure Calculations of Ammonia Adsorption in H-ZSM-5 Zeolites (1995) (39)
Effective membrane model of the immunological synapse. (2003) (39)
Dynamics of poly(methyl methacrylate) chains adsorbed on aluminum surfaces (1993) (38)
Nature of the interactions of 18-crown-6 with ammonium cations : a computational study (1992) (38)
The synapse assembly model. (2002) (38)
Zinc Blende 0D Quantum Dots to Wurtzite 1D Quantum Wires: The Oriented Attachment and Phase Change in ZnSe Nanostructures (2013) (37)
A simple theory and Monte Carlo simulations for recognition between random heteropolymers and disordered surfaces (1998) (36)
A field theory of random heteropolymers near solid surfaces: Analysis of interfacial organization and adsorption–desorption phase diagram (1995) (35)
Can Anions Be Inserted into MXene? (2021) (35)
Statistical Linkage Analysis of Substitutions in Patient-Derived Sequences of Genotype 1a Hepatitis C Virus Nonstructural Protein 3 Exposes Targets for Immunogen Design (2014) (35)
Glassy relaxation at polymer-solid interfaces (1992) (34)
Density Functional Theory Calculations of the Effects of Local Composition and Defect Structure on the Proton Affinity of H−ZSM-5 (1997) (34)
Density Functional Theory Investigations of the Direct Oxidation of Methane on an Fe-Exchanged Zeolite (2004) (34)
Transforming function of proto-ras genes depends on heterologous promoters and is enhanced by specific point mutations. (1991) (33)
The existence of quasi-two-dimensional glass-like structures at strongly interacting polymer-solid interfaces (1991) (32)
Recognition between random heteropolymers and multifunctional disordered surfaces (1997) (32)
Effects of solvent polarity and temperature on the conformational statistics of a simple macrocyclic polyether (1991) (32)
RNA in formation and regulation of transcriptional condensates (2021) (32)
Positive feedback regulation results in spatial clustering and fast spreading of active signaling molecules on a cell membrane. (2009) (32)
Phosphorylation of a Tyrosine Residue on Zap70 by Lck and Its Subsequent Binding via an SH2 Domain May Be a Key Gatekeeper of T Cell Receptor Signaling In Vivo (2016) (31)
Coreceptor affinity for MHC defines peptide specificity requirements for TCR interaction with coagonist peptide–MHC (2013) (31)
Scaling laws describe memories of host–pathogen riposte in the HIV population (2015) (31)
Interaction of Streptavidin-Based Peptide–MHC Oligomers (Tetramers) with Cell-Surface TCRs (2011) (31)
Diffusion of ionic penetrants in charged disordered media (1994) (30)
A Perspective on the Role of Computational Models in Immunology. (2017) (30)
A molecular orbital study of the interactions of acrylic polymers with aluminum: Implications for adhesion (1990) (30)
Structural and electronic features of a Broensted acid site in H-ZSM-5 (1993) (29)
Defining and Manipulating B Cell Immunodominance Hierarchies to Elicit Broadly Neutralizing Antibody Responses against Influenza Virus. (2020) (29)
Molecular Origin and Functional Consequences of Digital Signaling and Hysteresis During Ras Activation in Lymphocytes (2009) (29)
A Population Dynamics Model for Clonal Diversity in a Germinal Center (2017) (29)
Statistical mechanical concepts in immunology. (2010) (28)
Ion–ion correlations in quenched disordered media (1996) (28)
A Numerical Study of Polyampholyte Configuration (1996) (27)
Evolution of weak cooperative interactions for biological specificity (2018) (27)
Effect of silicate ratio on the distribution of silicate and aluminosilicate anions in TPA aluminosilicate solutions (1991) (27)
Identification of drug resistance mutations in HIV from constraints on natural evolution. (2015) (27)
Reconstruction and dissolution of shape-controlled Pt nanoparticles in acidic electrolytes. (2016) (26)
A hybrid deterministic-stochastic algorithm for modeling cell signaling dynamics in spatially inhomogeneous environments and under the influence of external fields. (2006) (26)
Biasing a transition state search to locate multiple reaction pathways (2003) (26)
Chloride (Cl−) ion-mediated shape control of palladium nanoparticles (2016) (25)
Effect of Cross-Linking on the Structure and Thermodynamics of Lamellar Block Copolymers (2006) (25)
Thermodynamics and Phase Behavior of Block Copolymer/Homopolymer Blends with Attractive and Repulsive Interactions (2002) (25)
Adsorption of random copolymers on disordered surfaces (1998) (25)
The structure of a random heteropolymer in a disordered medium: Ensemble growth simulation (1997) (24)
How the T cell signaling network processes information to discriminate between self and agonist ligands (2020) (24)
Optimizing immunization protocols to elicit broadly neutralizing antibodies (2020) (24)
Vacancy‐Driven High Rate Capabilities in Calcium‐Doped Na0.4MnO2 Cathodes for Aqueous Sodium‐Ion Batteries (2020) (23)
Microphase Ordering in Melts of Randomly Grafted Copolymers (1999) (22)
Deconvolving mutational patterns of poliovirus outbreaks reveals its intrinsic fitness landscape (2020) (22)
A dendronized polymer is a single-molecule glass. (2005) (22)
Review of Computational Studies of NCM Cathode Materials for Li‐ion Batteries (2020) (22)
Rational design of vaccine targets and strategies for HIV: a crossroad of statistical physics, biology, and medicine (2017) (21)
The nature of the interactions of poly(methyl methacrylate) oligomers with an aluminum surface (1991) (21)
Rate constants from the reaction path Hamiltonian. I. Reactive flux simulations for dynamically correct rates. (2004) (21)
Ammonium cation complexation by 18-crown-6 under realistic conditions: simulations using proper potentials (1993) (21)
Regulation of Signal Duration and the Statistical Dynamics of Kinase Activation by Scaffold Proteins (2008) (21)
Computational Prediction of Broadly Neutralizing HIV-1 Antibody Epitopes from Neutralization Activity Data (2013) (21)
Activation of Extracellular Signal-Regulated Kinase but Not of p38 Mitogen-Activated Protein Kinase Pathways in Lymphocytes Requires Allosteric Activation of SOS (2013) (20)
Phase behavior of random copolymers in quenched random media (1995) (20)
Random heteropolymer adsorption on disordered multifunctional surfaces: Effect of specific intersegment interactions (1998) (20)
Predominance of positive epistasis among drug resistance-associated mutations in HIV-1 protease (2018) (19)
How and Why Does the Immunological Synapse Form? Physical Chemistry Meets Cell Biology (2002) (19)
Stochastic effects are important in intrahost HIV evolution even when viral loads are high (2012) (18)
Molecular modeling and theory in chemical engineering (2001) (17)
On the Entropy of Protein Families (2015) (17)
Sink Flows of Viscoelastic Fluids (1986) (16)
Dynamics of relaxation at strongly interacting polymer–solid interfaces: Effects of chain architecture (1993) (16)
Correction: Directed Migration of Positively Selected Thymocytes Visualized in Real Time (2005) (16)
Rate constants from the reaction path Hamiltonian. II. Nonseparable semiclassical transition state theory. (2004) (15)
The low spike density of HIV may have evolved because of the effects of T helper cell depletion on affinity maturation (2018) (15)
Analysis of pattern formation and phase separation in the immunological synapse (2002) (15)
Order−Disorder Transitions in Cross-Linked Block Copolymer Solids (2005) (15)
The effect of mutations on the alloreactive T cell receptor/peptide-MHC interface structure: a molecular dynamics study. (2011) (14)
Stochastic bimodalities in deterministically monostable reversible chemical networks due to network topology reduction. (2009) (14)
Spin models inferred from patient data faithfully describe HIV fitness landscapes and enable rational vaccine design (2013) (14)
Electrochemical estimation of the active site density on metal-free nitrogen-doped carbon using catechol as an adsorbate. (2017) (14)
Hydrophobic CDR 3 residues promote the development of self-reactive T cells (2016) (14)
Roadmap on biology in time varying environments (2021) (13)
Movies, measurement, and modeling: the three Ms of mechanistic immunology (2005) (13)
Study of dielectric relaxation behaviour in Li-doped semiconducting BiSrCaCuO glasses (1994) (13)
Exotic transitions of random heteropolymers interacting with solid surfaces (1996) (13)
Predicting the Immunogenicity of T cell epitopes: From HIV to SARS-CoV-2 (2020) (12)
Sequence dependence of polymer dynamics in quenched disordered media: Weak attraction facilitates transport (2002) (12)
Electrochemical estimation of active site density on a metal-free carbon-based catalyst (2018) (12)
Sequence fluctuation‐dependent adsorption–depletion transition for random heteropolymers (1996) (12)
Enhanced clearance of HIV-1-infected cells by anti-HIV-1 broadly neutralizing antibodies in vivo (2016) (12)
Affinity Inequality among Serum Antibodies That Originate in Lymphoid Germinal Centers (2015) (11)
Freezing of compact random heteropolymers with correlated sequence fluctuations (1998) (11)
Decoding communications between cells in the immune system using principles of chemical engineering (2003) (11)
Mechanisms underlying vaccination protocols that may optimally elicit broadly neutralizing antibodies against highly mutable pathogens (2020) (10)
Movies, measurement, and modeling (2005) (10)
Chemical Tailoring of Band Offsets at the Interface of ZnSe–CdS Heterostructures for Delocalized Photoexcited Charge Carriers (2016) (10)
Microphase segregation in molten randomly grafted copolymers (2001) (10)
Signatures of the Order−Disorder Transition in Copolymers with Quenched Sequence Disorder (2004) (10)
Self-Assembly of Dendronized Polymers. (2009) (9)
Strain induced band alignment in wurtzite-zincblende InAs heterostructured nanowires (2015) (9)
Learning from HIV-1 to predict the immunogenicity of T cell epitopes in SARS-CoV-2 (2021) (9)
Modelling and in vitro testing of the HIV-1 Nef fitness landscape (2019) (9)
Correction: The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies (2013) (8)
Effects of quenched and annealed macromolecular crowding elements on a simple model for signaling in T lymphocytes. (2006) (8)
Simple models for extracting mechanical work from the ATP hydrolysis cycle. (2006) (8)
Lighting up TCR takes advantage of serial triggering (2002) (8)
Tug of war at the exit door. (2008) (7)
Elastic Constants for Random Block Copolymers in the Strong Segregation Limit: Effects of Sequence Distribution (1994) (7)
The phase diagram of molten randomly grafted copolymers (2001) (7)
Solvation Thermodynamics of Simple Crown Ethers by the XRISM Method (1994) (7)
Alternative ZAP70-p38 signals prime a classical p38 pathway through LAT and SOS to support regulatory T cell differentiation (2019) (6)
The Influence of T Cell Development on Pathogen Specificity and Autoreactivity (2011) (6)
Signaling Cascades Modulate the Speed of Signal Propagation through Space (2009) (6)
A Model for How Signal Duration Can Determine Distinct Outcomes of Gene Transcription Programs (2012) (6)
Biochemical heterogeneity and developmental varieties in T-cell leukemia (2013) (6)
Boundary layer analysis for the modeling of noncatalytic gas-solid reactions (1987) (6)
Multiscale affinity maturation simulations to elicit broadly neutralizing antibodies against HIV (2021) (6)
How nonuniform contact profiles of T cell receptors modulate thymic selection outcomes. (2018) (6)
A phase separation model predicts key features of transcriptional control (2017) (6)
Immunopaleontology reveals how affinity enhancement is achieved during affinity maturation of antibodies to influenza virus (2012) (6)
Effects of substituting mercury for yttrium, barium and copper on the superconducting transition temperature of YBa2Cu3Oδ (1994) (6)
Monte Carlo- and Simulated-Annealing-Based Funneled Approach for the Prediction of Cation Ordering in Mixed Transition-Metal Oxide Materials (2020) (6)
Anisotropic irradiation growth of EBR-II driver fuel pins☆ (1971) (5)
Mechanisms underlying vaccination protocols that may optimally elicit broadly neutralizing antibodies against highly mutable pathogens. (2021) (5)
Studies of Nickel-Rich LiNi0.85Co0.10Mn0.05O2 Cathode Materials Doped with Molybdenum Ions for Lithium-Ion Batteries (2021) (5)
Only signaling modules that discriminate sharply between stimulatory and nonstimulatory inputs require basal signaling for fast cellular responses. (2010) (5)
Correction: Protein Clusters on the T Cell Surface May Suppress Spurious Early Signaling Events (2012) (4)
Behavior of a random heteropolymer in mixed solvents (1999) (4)
Adhesion promotion at a homopolymer–solid interface using random heteropolymers (1998) (4)
Protein Clusters on the T Cell Surface May Suppress Spurious Early Signaling Events (2012) (4)
Type II band alignment in InAs zinc-blende/wurtzite heterostructured nanowires (2016) (4)
Design of immunogens to elicit broadly neutralizing antibodies against HIV targeting the CD4 binding site (2021) (4)
Kinetic pathways of phase ordering in lipid raft model systems. (2006) (4)
Micelle formation of randomly grafted copolymers in slightly selective solvents (2001) (4)
Adenovirus-vectored vaccine containing multidimensionally conserved parts of the HIV proteome is immunogenic in rhesus macaques (2021) (4)
Two complementary features of humoral immune memory confer protection against the same or variant antigens (2022) (4)
Design of immunogens for eliciting antibody responses that may protect against SARS-CoV-2 variants (2022) (3)
Antigen presentation dynamics shape the response to emergent variants like SARS-CoV-2 Omicron strain after multiple vaccinations with wild type strain (2022) (3)
Statistical Physics of T-Cell Development and Pathogen Specificity (2013) (3)
Theoretical study of polymeric mixtures with different sequence statistics. I. Ising class: Linear random copolymers with different statistical sequences and ternary blends of linear random copolymers with homopolymers (2000) (3)
Identifying dynamical bottlenecks of stochastic transitions in biochemical networks. (2012) (3)
Electronic structure and transport properties of coupled CdS/ZnSe quantum dots (2019) (2)
Polymer folding through active processes recreates features of genome organization (2022) (2)
In Silico Reconstruction of HIV Viral Fitness Landscapes (2012) (2)
Water Quality Models with Different Functions of Exotech Radiometer Bands (1981) (2)
Characterization of crown ethers as macrocyclic elements for rotaxane preparation: a Monte Carlo simulation (1994) (2)
Transient behavior of “high-swelling” EBR-11 Mark-1A driver fuel in treat (1971) (2)
Magnitude and Kinetics of CD8[superscript +] T Cell Activation during Hyperacute HIV Infection Impact Viral Set Point (2015) (2)
A comparative study of magnetic and optical properties of Mn-, Gd-, and Nd-doped ZnO nanowires (2017) (2)
Dysregulated RasGRP 1 Responds to Cytokine Receptor Input in T Cell Leukemogenesis Citation (2013) (2)
Broadband dielectric spectroscopy of Nafion-117, sulfonated polysulfone (sPSF) and sulfonated polyether ketone (sPEK) membranes (2017) (2)
For T cell receptors, some breakups might not last forever. (2010) (2)
Progress and Future Directions in the Theory of Strongly Interacting Polymer-Solid Interfaces (1994) (1)
Author response: Deconstruction of the Ras switching cycle through saturation mutagenesis (2017) (1)
Guiding the evolution to catch the virus: An in silico study of affinity maturation against rapidly mutating antigen (2014) (1)
Application of numerical methods (2008) (1)
Can Viral Geometry Determine B Cell Selection during an Immune Response? (2019) (1)
Adensity functional theory study of the effects ofmetal cations on theBr nsted acidity ofH-ZSM-5 (1998) (1)
Leading Edge Perspective A Phase Separation Model for Transcriptional Control (2017) (1)
Theoretical study of polymeric mixtures with different sequence statistics. II. Brazovskii class: Linear random copolymers with diblock copolymers (2000) (1)
Interaction of Streptavidin-Based Peptide-MHC Oligomers (Tetramers) with Cell-Surface T Cell Receptors (2011) (1)
Discovering statistical vulnerabilities in highly mutable viruses: A random matrix approach (2014) (1)
Density Functional Theory Calculations of the Oxidative Dehydrogenation of Propane on the ( 010 ) Surface of V 2 O (1)
Author response: Role of framework mutations and antibody flexibility in the evolution of broadly neutralizing antibodies (2018) (1)
Faculty Opinions recommendation of Function of the nucleotide exchange activity of vav1 in T cell development and activation. (2010) (1)
A simple model for how the risk of pandemics from different virus families depends on viral and human traits (2021) (1)
Nanomechanical Sensor Array for Detection of Biomolecular Bindings: Toward a Label-Free Clinical Assay for Serum Tumor Markers (2004) (1)
Co-receptor scanning by the T-cell receptor provides a mechanism for T cell tolerance (2015) (1)
Influence of Occupancy and Pore Network Topology on Tracer and Transport Diffusion in Zeolites (1999) (1)
Multiscale (Nano-to-Micro) Design of Integrated Nanobio Systems (2004) (1)
First principles study of electrocatalytic behavior of olivine phosphates with mixed alkali and mixed transition metal atoms (2020) (0)
Molecular Dynamics Simulation of Hybridization Kinetics of Surface-Grafted DNA (2005) (0)
Modelling the Mechanics of the Circulation: Blood Rheology and Atherosclerosis (2014) (0)
The Influence of T Cell Development on Pathogen Specificity and Autoreactivity (2011) (0)
Applications of density functional theory to identify reaction pathways for processes occurring in zeolites and on dispersed metal oxides (2000) (0)
PNAS Plus Significance Statements (2018) (0)
Stochastic Responses May Allow Genetically Diverse Cell Populations to Optimize Performance with Simpler Signaling Networks (2013) (0)
Effects of methyl substitution in amines on the thermodynamics and kinetics of CO/sub 2/ absorption (1988) (0)
Understanding and Harnessing the Immune System for the Rational Design of Therapies and Vaccines (2013) (0)
Focusing antibody responses against distraction and loss in diversity (2016) (0)
Viruses, Pandemics, and Immunity (2021) (0)
AIChE Journal: Preface to Perspectives (2005) (0)
Density functional theory study of benzene oxidation over Fe-ZSM (2003) (0)
SUPPORTING INFORMATION FOR The Fitness Landscape of HIV-1 Gag (2014) (0)
The kinetics and location of intra-host HIV evolution to evade cellular immunity are predictable (2016) (0)
Magnitude and Kinetics of CD 8 [ superscript + ] T Cell Activation during Hyperacute HIV Infection Impact Viral Set (2015) (0)
Specificity and Self Recognition in Immunity (2012) (0)
MO Approach to Substituent Effects in Amine-CO2 Interactions. (1989) (0)
A Model for Asymmetric Ballooning and Analyses of Ballooning Behaviour of Single Rods with Probabilistic Methods (1983) (0)
Ab initio study of novel Nano structures (2016) (0)
Partitioning of cancer therapeutics in nuclear condensates. (2021) (0)
Penn Symposium on Mathematical & Computational Biology May 22-23 , 2017 (2017) (0)
OR.30. T Cell Sensing of Antigen Dose Governs Interactive Behavior with Dendritic Cells and Sets a Threshold for T Cell Activation (2008) (0)
On the Entropy of Protein Families (2016) (0)
Faithful Models of Viral Fitness can be Inferred from Mutation Patterns in Viral DNA Sequences Sampled from a Population (2013) (0)
Digital signaling, signal filters and central tolerance in thymocytes (2009) (0)
SINGLE MOLECULE PROPERTIES AND SELF ASSEMBLY OF DENDRONIZED POLYMERS (2005) (0)
Simulation of Biomolecular Nanomechanical Systems (2006) (0)
Characterization of Monophasic and Diphasic Mullite Precursors by Solid State Reaction Study (2004) (0)
Continuous Order-Disorder Transition in Diblock Copolymer melts under High Pressure (2003) (0)
University of Birmingham Stochastic Discrete Effects in a Simple Gene Circuit with Delayed Negative Feedback (2014) (0)
OBITUARY (1978) (0)
What áches’ my industry (2009) (0)
Investigation of Novel Zap-70 Functionality in T Cell Signaling Pathways using Computational Modeling (2014) (0)
Analysis of Collective Coevolution in HIV Proteins Suggests Strategies for Rational Vaccine Design (2012) (0)
Chakraborty and Shakhnovich Reply (1997) (0)
Principles that Govern the Performance of Molecular Motors (2003) (0)
Tribute to Doros N. Theodorou. (2023) (0)
Transformation Kinetics of U-5 Wt Percent Fs Driver-Fuel Pins Produced by Aerojet General Corporation. (1970) (0)
Inferring the intrinsic mutational fitness landscape of influenzalike evolving antigens from temporally ordered sequence data. (2022) (0)
Ideal Random Heteropolymer Adsorption on Chemically Disordered Surfaces (1996) (0)
Phase behavior of cross-linked block copolymers (2005) (0)
Inferring the intrinsic mutational fitness landscape of influenza-like evolving antigens from temporally ordered sequence data (2021) (0)
Abstract GS3-10: Partitioning of cancer therapeutics in nuclear condensates (2021) (0)
Schrodinger equations and diffusion theory. By Masao Nagasawa; Birkhuuser Verlug; Berlin; 1993; 31 9 pp.; $99.00 (1995) (0)
Role of CD4 and CD8 coreceptors in the membrane proximal signaling and signal enhancement by self-peptide (35.15) (2009) (0)
for Immunogen Design Nonstructural Protein 3 Exposes Targets of Genotype 1a Hepatitis C Virus Sequences Substitutions in Patient-Derived Statistical Linkage Analysis of (2014) (0)
Spatial coordination in memrane proximal signaling in T-cells (2009) (0)
Deconvolving mutational patterns of poliovirus outbreaks reveals its intrinsic fitness landscape (2020) (0)
Preface to perspectives (2005) (0)
Design of immunogens for eliciting antibody responses that may protect against SARS-CoV-2 variants (2023) (0)
Organization and regulation of nuclear condensates by gene activity (2022) (0)
Tribute to David Chandler (2005) (0)
Supplementary material from "David Chandler. 15 October 1944 — 18 April 2017" (2020) (0)
Seeing in Numbers (2010) (0)
Modeling and Manipulating Antibody Response Against Influenza and Coronavirus Spike Proteins and Exploring their Role in Directing Spike Evolution (2021) (0)
Fitness-based prediction of sites of drug resistance mutations using sequence data from HIV protease inhibitor-näıve patients (2014) (0)
Systems immunology (WS-086) Chairpersons: Osamu Ohara, Arup Chakraborty (2010) (0)
Importance of signal duration and the time scale dependence of signal integration in biochemical networks (2008) (0)
Influence of reducing agents on optical properties of reduced graphene oxide (2016) (0)
Abstract B039: In silico models for B cell receptor signaling in chronic lymphocytic leukemia (2016) (0)
Effect of Silicate Ratio on the Distribution of Silicate and Aluminosilicate Anions in TPA Aluminosilicate Solutions. (1991) (0)
Chapter-4 Innovation Diffusion & Launch Time of Successive Generational Technologies (2012) (0)
Why does HIV have so few spike proteins on its surface, unlike any other virus? (2018) (0)
Steering antibody evolution to combat rapidly mutating pathogens (2015) (0)
Affinity among Serum Antibodies That Originate in Germinal Centers. (2015) (0)
Multivalent gene regulatory elements localize condensation of transcription machinery (2019) (0)
Antigen presentation dynamics shape the antibody response to variants like SARS-CoV-2 Omicron after multiple vaccinations with the original strain (2023) (0)
University of Groningen Monovalent engagement of the BCR activates ovalbumin-specific transnuclear B cells Avalos, (2014) (0)
David Chandler. 15 October 1944—18 April 2017 (2020) (0)
Understanding immunology: fun at an intersection of the physical, life, and clinical sciences (2014) (0)
Influenza virus geometry shapes the immune response against it (2020) (0)
How to Hit HIV where it Hurts (2017) (0)
How T lymphocytes see antigen (2009) (0)
A model for cis-regulation of transcriptional condensates and gene expression by proximal lncRNAs (2023) (0)
Order-Disorder Transition in Randomly Grafted Copolymers (2003) (0)
Requires Allosteric Activation of SOS Protein Kinase Pathways in Lymphocytes Kinase but Not of p 38 Mitogen-Activated Activation of Extracellular Signal-Regulated (2013) (0)
The Behavior of Random Heteropolymers in Disordered Media: Replica Symmetry Breaking and ``Folded'' Phases (1996) (0)
A model for genetic and epigenetic regulatory networks identifies rare for transcription factor induced pluripotency (2010) (0)
Mechanisms that promote the evolution of cross-reactive antibodies upon vaccination with designed influenza immunogens (2022) (0)
Electronic Structure Calculations of Ammonia Adsorption in H-ZSM-5 Zeolites. (1995) (0)
Cell-Surface TCRs MHC Oligomers (Tetramers) with - Interaction of Streptavidin-Based Peptide (2011) (0)

This paper list is powered by the following services:

Other Resources About Arup Chakraborty

en.wikipedia.org

What Schools Are Affiliated With Arup Chakraborty?

Arup Chakraborty is affiliated with the following schools:

Arup Chakraborty's Academic­Influence.com Rankings