Kris Gevaert

Q: What Schools Are Affiliated With Kris Gevaert

Kris Gevaert is affiliated with the following schools: Aarhus University, Ghent University, University of Oxford, University of Algarve

Kris Gevaert's AcademicInfluence.com Rankings

Kris Gevaert

Engineering

#5299

World Rank

#6549

Historical Rank

Materials Science

#282

World Rank

#285

Historical Rank

Applied Physics

#1504

World Rank

#1536

Historical Rank

engineering Degrees

Kris Gevaert

Biology

#10040

World Rank

#13323

Historical Rank

Systems Biology

#25

World Rank

#25

Historical Rank

Bioinformatics

#115

World Rank

#117

Historical Rank

Neuroscience

#1514

World Rank

#1565

Historical Rank

biology Degrees

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Engineering
Biology

Kris Gevaert's Degrees

PhD Bioinformatics Ghent University
Masters Bioinformatics Ghent University
Bachelors Bioinformatics Ghent University

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Kris Gevaert's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Improved visualization of protein consensus sequences by iceLogo (2009) (603)
Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides (2003) (549)
PRIDE: The proteomics identifications database (2005) (547)
LNCipedia: a database for annotated human lncRNA transcript sequences and structures (2012) (472)
Proteomics analyses reveal the evolutionary conservation and divergence of N-terminal acetyltransferases from yeast and humans (2009) (457)
Global Analysis of the Mitochondrial N-Proteome Identifies a Processing Peptidase Critical for Protein Stability (2009) (441)
Melanoma addiction to the long non-coding RNA SAMMSON (2016) (434)
Cdc42 induces filopodia by promoting the formation of an IRSp53:Mena complex (2001) (382)
The serine protease Omi/HtrA2 is released from mitochondria during apoptosis. Omi interacts with caspase-inhibitor XIAP and induces enhanced caspase activity (2002) (368)
Morphological and biochemical characterization of a human liver in a uPA‐SCID mouse chimera (2005) (360)
Endonuclease G: a mitochondrial protein released in apoptosis and involved in caspase-independent DNA degradation (2001) (343)
Protein identification methods in proteomics (2000) (317)
LRRK2 Controls an EndoA Phosphorylation Cycle in Synaptic Endocytosis (2012) (317)
Rac/Cdc42 and p65PAK Regulate the Microtubule-destabilizing Protein Stathmin through Phosphorylation at Serine 16* (2001) (303)
The miR-17-92 microRNA cluster regulates multiple components of the TGF-β pathway in neuroblastoma. (2010) (297)
PINK1 Loss-of-Function Mutations Affect Mitochondrial Complex I Activity via NdufA10 Ubiquinone Uncoupling (2014) (296)
Caspase-14 protects against epidermal UVB photodamage and water loss (2007) (294)
Targeted Peptidecentric Proteomics Reveals Caspase-7 as a Substrate of the Caspase-1 Inflammasomes *S (2008) (289)
The deubiquitinase USP15 antagonizes Parkin-mediated mitochondrial ubiquitination and mitophagy (2014) (262)
Protein N-terminal acetyltransferases: when the start matters. (2012) (252)
Identification of a novel mechanism of blood–brain communication during peripheral inflammation via choroid plexus‐derived extracellular vesicles (2016) (234)
Parkin Interacts with Ambra1 to Induce Mitophagy (2011) (226)
Chromatographic Isolation of Methionine-containing Peptides for Gel-free Proteome Analysis (2002) (219)
Caspase-specific and nonspecific in vivo protein processing during Fas-induced apoptosis (2005) (217)
Listeria monocytogenes impairs SUMOylation for efficient infection (2010) (209)
The TPLATE Adaptor Complex Drives Clathrin-Mediated Endocytosis in Plants (2014) (207)
T‐cell receptor‐induced JNK activation requires proteolytic inactivation of CYLD by MALT1 (2011) (193)
Caspase-14 is required for filaggrin degradation to natural moisturizing factors in the skin. (2011) (176)
ANGUSTIFOLIA3 Binds to SWI/SNF Chromatin Remodeling Complexes to Regulate Transcription during Arabidopsis Leaf Development[W] (2014) (174)
NatF Contributes to an Evolutionary Shift in Protein N-Terminal Acetylation and Is Important for Normal Chromosome Segregation (2011) (165)
Human Proteinpedia enables sharing of human protein data (2008) (164)
Deep Proteome Coverage Based on Ribosome Profiling Aids Mass Spectrometry-based Protein and Peptide Discovery and Provides Evidence of Alternative Translation Products and Near-cognate Translation Initiation Events* (2013) (164)
Selecting protein N-terminal peptides by combined fractional diagonal chromatography (2011) (158)
N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB (2012) (157)
Identification and Functional Characterization of N-Terminally Acetylated Proteins in Drosophila melanogaster (2009) (155)
Improved recovery of proteome‐informative, protein N‐terminal peptides by combined fractional diagonal chromatography (COFRADIC) (2008) (152)
Confounding factors of ultrafiltration and protein analysis in extracellular vesicle research (2017) (147)
Sulfenome mining in Arabidopsis thaliana (2014) (146)
Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase (2019) (146)
Protein Language: Post-Translational Modifications Talking to Each Other. (2018) (141)
DBToolkit: processing protein databases for peptide-centric proteomics (2005) (140)
Analysis of the γ-secretase interactome and validation of its association with tetraspanin-enriched microdomains (2009) (138)
A Plant Plasma Membrane H+-ATPase Expressed in Yeast Is Activated by Phosphorylation at Its Penultimate Residue and Binding of 14-3-3 Regulatory Proteins in the Absence of Fusicoccin* (2000) (138)
Listeria comet tails: the actin-based motility machinery at work. (2008) (137)
LRRK2 functions in synaptic vesicle endocytosis through a kinase-dependent mechanism (2015) (135)
An improved toolbox to unravel the plant cellular machinery by tandem affinity purification of Arabidopsis protein complexes (2014) (135)
Toll-like Receptor 4 Engagement on Dendritic Cells Restrains Phago-Lysosome Fusion and Promotes Cross-Presentation of Antigens. (2015) (133)
Citrullinated Glucose-Regulated Protein 78 Is an Autoantigen in Type 1 Diabetes (2014) (132)
Redox Proteomics of Protein-bound Methionine Oxidation* (2011) (130)
The human platelet proteome mapped by peptide‐centric proteomics: A functional protein profile (2005) (124)
Proteome-wide Identification of HtrA2/Omi Substrates. (2007) (124)
Synaptogyrin-3 Mediates Presynaptic Dysfunction Induced by Tau (2018) (124)
Damage on plants activates Ca2+-dependent metacaspases for release of immunomodulatory peptides (2019) (124)
Proteome-derived Peptide Libraries Allow Detailed Analysis of the Substrate Specificities of Nα-acetyltransferases and Point to hNaa10p as the Post-translational Actin Nα-acetyltransferase* (2011) (124)
Multiple mechanisms limit meiotic crossovers: TOP3α and two BLM homologs antagonize crossovers in parallel to FANCM (2015) (122)
Large-scale identification of N-terminal peptides in the halophilic archaea Halobacterium salinarum and Natronomonas pharaonis. (2007) (121)
SitePredicting the cleavage of proteinase substrates. (2009) (121)
Impairment of Angiogenesis by Fatty Acid Synthase Inhibition Involves mTOR Malonylation. (2018) (120)
Matrix metalloproteinase 13 modulates intestinal epithelial barrier integrity in inflammatory diseases by activating TNF (2013) (117)
Global differential non-gel proteomics by quantitative and stable labeling of tryptic peptides with oxygen-18. (2004) (115)
FYVE1/FREE1 Interacts with the PYL4 ABA Receptor and Mediates Its Delivery to the Vacuolar Degradation Pathway (2016) (114)
Mutations in LZTR1 drive human disease by dysregulating RAS ubiquitination (2018) (114)
The ROS Wheel: Refining ROS Transcriptional Footprints1[OPEN] (2016) (114)
Genetic predisposition for beta cell fragility underlies type 1 and type 2 diabetes (2016) (113)
A protein phosphatase 2A complex spatially controls plant cell division (2013) (113)
Proteome analysis of the Chlamydia pneumoniaeelementary body (2001) (112)
The Chaperone-Like Protein HYPK Acts Together with NatA in Cotranslational N-Terminal Acetylation and Prevention of Huntingtin Aggregation (2010) (111)
NAA80 is actin’s N-terminal acetyltransferase and regulates cytoskeleton assembly and cell motility (2018) (111)
cIAP1/2 Are Direct E3 Ligases Conjugating Diverse Types of Ubiquitin Chains to Receptor Interacting Proteins Kinases 1 to 4 (RIP1–4) (2011) (107)
Analysis of Protein Processing by N-terminal Proteomics Reveals Novel Species-specific Substrate Determinants of Granzyme B Orthologs *S (2009) (105)
Dynamic Changes in ANGUSTIFOLIA3 Complex Composition Reveal a Growth Regulatory Mechanism in the Maize Leaf[OPEN] (2015) (104)
Chronic Kidney Disease Circulating Calciprotein Particles and Extracellular Vesicles Promote Vascular Calcification: A Role for GRP (Gla-Rich Protein) (2018) (102)
Complementary positional proteomics for screening substrates of endo- and exoproteases (2010) (102)
Variable Glutamine-Rich Repeats Modulate Transcription Factor Activity (2015) (101)
Proteome studies of bacterial antibiotic resistance mechanisms. (2014) (97)
Tumor necrosis factor-induced modulation of glyoxalase I activities through phosphorylation by PKA results in cell death and is accompanied by the formation of a specific methylglyoxal-derived AGE (2002) (97)
In Vitro and in Vivo Protein-bound Tyrosine Nitration Characterized by Diagonal Chromatography* (2009) (96)
A nanobody targeting the F-actin capping protein CapG restrains breast cancer metastasis (2013) (96)
Cysteines under ROS attack in plants: a proteomics view. (2015) (95)
The Human N-Alpha-Acetyltransferase 40 (hNaa40p/hNatD) Is Conserved from Yeast and N-Terminally Acetylates Histones H2A and H4 (2011) (94)
Small Heat-Shock Protein HSPB1 Mutants Stabilize Microtubules in Charcot-Marie-Tooth Neuropathy (2011) (93)
Biochemical and cellular analysis of Ogden syndrome reveals downstream Nt-acetylation defects (2014) (91)
Constitutively active UVR8 photoreceptor variant in Arabidopsis (2013) (89)
A Repressor Protein Complex Regulates Leaf Growth in Arabidopsis (2015) (89)
A la carte proteomics with an emphasis on gel‐free techniques (2007) (88)
The mTOR and PP2A Pathways Regulate PHD2 Phosphorylation to Fine-Tune HIF1α Levels and Colorectal Cancer Cell Survival under Hypoxia (2017) (87)
An organellar nα-acetyltransferase, naa60, acetylates cytosolic N termini of transmembrane proteins and maintains Golgi integrity. (2015) (86)
Improving the reliability and throughput of mass spectrometry‐based proteomics by spectrum quality filtering (2006) (86)
GRIM REAPER peptide binds to receptor kinase PRK5 to trigger cell death in Arabidopsis (2015) (86)
Chitinase-like Proteins are Candidate Biomarkers for Sepsis-induced Acute Kidney Injury* (2012) (85)
Stable isotopic labeling in proteomics (2008) (85)
The deubiquitylase USP33 discriminates between RALB functions in autophagy and innate immune response (2013) (84)
ms_lims, a simple yet powerful open source laboratory information management system for MS‐driven proteomics (2010) (84)
The MAGUK protein MPP7 binds to the polarity protein hDlg1 and facilitates epithelial tight junction formation. (2007) (84)
Reversible labeling of cysteine‐containing peptides allows their specific chromatographic isolation for non‐gel proteome studies (2004) (84)
Look Closely, the Beautiful May Be Small: Precursor-Derived Peptides in Plants. (2019) (82)
Zebrafish Collagen Type I: Molecular and Biochemical Characterization of the Major Structural Protein in Bone and Skin (2016) (82)
A matrix-assisted laser desorption ionization post-source decay (MALDI-PSD) analysis of proteins released from isolated liver mitochondria treated with recombinant truncated Bid (2002) (81)
Recessive osteogenesis imperfecta caused by LEPRE1 mutations: clinical documentation and identification of the splice form responsible for prolyl 3-hydroxylation (2008) (81)
A novel approach to analyze lysosomal dysfunctions through subcellular proteomics and lipidomics: the case of NPC1 deficiency (2017) (80)
Comparative proteome analysis of Chlamydia trachomatis serovar A, D and L2 (2002) (79)
Protein Methionine Sulfoxide Dynamics in Arabidopsis thaliana under Oxidative Stress (2015) (79)
The generation and use of recombinant extracellular vesicles as biological reference material (2019) (79)
Protein alpha‐N‐acetylation studied by N‐terminomics (2011) (78)
The Arabidopsis METACASPASE9 Degradome[C][W] (2013) (78)
Cells Lacking β-Actin are Genetically Reprogrammed and Maintain Conditional Migratory Capacity* (2012) (77)
Proteomic Identification of Cysteine Cathepsin Substrates Shed from the Surface of Cancer Cells* (2015) (77)
Characterization of a secreted Chlamydia protease (2002) (76)
Feeling the Heat: Searching for Plant Thermosensors. (2019) (73)
Diversity in Protein Glycosylation among Insect Species (2011) (71)
DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis (2018) (71)
Mining for protein S-sulfenylation in Arabidopsis uncovers redox-sensitive sites (2019) (71)
A proteogenomics approach integrating proteomics and ribosome profiling increases the efficiency of protein identification and enables the discovery of alternative translation start sites (2014) (69)
Positional proteomics reveals differences in N‐terminal proteoform stability (2016) (69)
Diagonal reverse-phase chromatography applications in peptide-centric proteomics: ahead of catalogue-omics? (2005) (69)
Disruption of endocytosis through chemical inhibition of clathrin heavy chain function (2019) (68)
CEP5 and XIP1/CEPR1 regulate lateral root initiation in Arabidopsis (2016) (68)
The transcriptional repressor Glis2 is a novel binding partner for p120 catenin. (2007) (66)
Proteome-wide Substrate Analysis Indicates Substrate Exclusion as a Mechanism to Generate Caspase-7 Versus Caspase-3 Specificity* (2009) (66)
It’s Time for Some “Site”-Seeing: Novel Tools to Monitor the Ubiquitin Landscape in Arabidopsis thaliana (2016) (65)
A review of COFRADIC techniques targeting protein N-terminal acetylation (2009) (64)
FIGL1 and its novel partner FLIP form a conserved complex that regulates homologous recombination (2017) (63)
Proteome-wide characterization of N-glycosylation events by diagonal chromatography. (2006) (62)
DYn-2 Based Identification of Arabidopsis Sulfenomes* (2015) (62)
A complex interaction pattern of CIS and SOCS2 with the leptin receptor (2006) (61)
The RING E3 Ligase KEEP ON GOING Modulates JASMONATE ZIM-DOMAIN12 Stability1[OPEN] (2015) (61)
The Plant PTM Viewer, a central resource for exploring plant protein modifications. (2019) (61)
Global phosphoproteome analysis on human HepG2 hepatocytes using reversed‐phase diagonal LC (2005) (61)
MS‐driven protease substrate degradomics (2010) (60)
Protein identification based on matrix assisted laser desorption/ionization‐post source decay‐mass spectrometry (2001) (60)
A COFRADIC protocol to study protein ubiquitination. (2014) (59)
EXPANSIN A1-mediated radial swelling of pericycle cells positions anticlinal cell divisions during lateral root initiation (2019) (57)
The expression, processing and localization of polymorphic membrane proteins in Chlamydia pneumoniae strain CWL029 (2002) (57)
A peptide concentration and purification method for protein characterization in the subpicomole range using matrix assisted laser desorption/ionization‐postsource decay (MALDI‐PSD) sequencing (1998) (57)
Angiotensin I-converting enzyme inhibitory activity of gelatin hydrolysates and identification of bioactive peptides. (2011) (57)
Experimental design and data-analysis in label-free quantitative LC/MS proteomics: A tutorial with MSqRob. (2018) (56)
Peptizer, a Tool for Assessing False Positive Peptide Identifications and Manually Validating Selected Results*S (2008) (56)
Plant proteins under oxidative attack (2013) (56)
Structural analysis and identification of gel‐purified proteins, available in the femtomole range, using a novel computer program for peptide sequence assignment, by matrix‐assisted laser desorption ionization — reflectron time‐of‐fligh — mass spectrometry (1996) (55)
Bioinformatics analysis of a Saccharomyces cerevisiae N-terminal proteome provides evidence of alternative translation initiation and post-translational N-terminal acetylation. (2011) (55)
Peptide-level Robust Ridge Regression Improves Estimation, Sensitivity, and Specificity in Data-dependent Quantitative Label-free Shotgun Proteomics* (2015) (54)
Functional characterization of the Arabidopsis transcription factor bZIP29 reveals its role in leaf and root development (2016) (54)
Identification of Chlamydia trachomatis CT621, a protein delivered through the type III secretion system to the host cell cytoplasm and nucleus (2009) (53)
Vaccination with an Ostertagia ostertagi Polyprotein Allergen Protects Calves against Homologous Challenge Infection (2004) (53)
Drugging the catalytically inactive state of RET kinase in RET-rearranged tumors (2017) (52)
Do we want our data raw? Including binary mass spectrometry data in public proteomics data repositories (2005) (52)
MascotDatfile: An open‐source library to fully parse and analyse MASCOT MS/MS search results (2007) (52)
Distinct branches of the N-end rule pathway modulate the plant immune response. (2018) (51)
De novo design of a biologically active amyloid (2016) (51)
A Quantitative Proteomics Design for Systematic Identification of Protease Cleavage Events* (2010) (51)
C‐terminomics: Targeted analysis of natural and posttranslationally modified protein and peptide C‐termini (2015) (50)
Identification and Characterization of Immunogenic Proteins of Mycoplasma genitalium (2006) (50)
Mapping Proteolytic Processing in the Secretome of Gastric Cancer-Associated Myofibroblasts Reveals Activation of MMP-1, MMP-2, and MMP-3 (2013) (49)
Vaccination against Ostertagia ostertagi with subfractions of the protective ES-thiol fraction. (2007) (49)
Classification and Nomenclature of Metacaspases and Paracaspases: No More Confusion with Caspases. (2020) (49)
Exploring the protein-protein interaction landscape in plants. (2018) (49)
The Non-JAZ TIFY Protein TIFY8 from Arabidopsis thaliana Is a Transcriptional Repressor (2014) (49)
Peptides adsorbed on reverse‐phase chromatographic beads as targets for femtomole sequencing by post‐source decay matrix assisted laser desorption ionization‐reflectron time of flight mass spectrometry (MALDI‐RETOF‐MS) (1997) (47)
N‐terminal acetylome analysis reveals the specificity of Naa50 (Nat5) and suggests a kinetic competition between N‐terminal acetyltransferases and methionine aminopeptidases (2015) (47)
An agarose-based gel-concentration system for microsequence and mass spectrometric characterization of proteins previously purified in polyacrylamide gels starting at low picomole levels. (1995) (47)
A Saccharomyces cerevisiae Model Reveals In Vivo Functional Impairment of the Ogden Syndrome N-Terminal Acetyltransferase NAA10 Ser37Pro Mutant* (2014) (47)
Interaction of the Tobacco Lectin with Histone Proteins1[C][W][OA] (2011) (46)
Caspase substrates: easily caught in deep waters? (2009) (45)
Fast profiling of protease specificity reveals similar substrate specificities for cathepsins K, L and S (2015) (45)
Mechanistic insight into taxol-induced cell death (2008) (45)
qcML: An Exchange Format for Quality Control Metrics from Mass Spectrometry Experiments* (2014) (45)
Strigolactones, karrikins and beyond. (2017) (45)
Improved tandem mass spectrometric characterization of 3-nitrotyrosine sites in peptides. (2006) (44)
A novel strategy for the comprehensive analysis of the biomolecular composition of isolated plasma membranes (2011) (44)
Abolition of stress-induced protein synthesis sensitizes leukemia cells to anthracycline-induced death. (2008) (43)
N-terminal acetylation and other functions of Nα-acetyltransferases (2012) (43)
Thermo-msf-parser: an open source Java library to parse and visualize Thermo Proteome Discoverer msf files. (2011) (42)
The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis (2017) (42)
A fast and convenient MALDI-MS based proteomic approach: identification of components scaffolded by the actin cytoskeleton of activated human thrombocytes. (2000) (41)
Ectopic application of the repressive histone modification H3K9me2 establishes post-zygotic reproductive isolation in Arabidopsis thaliana (2017) (41)
Rover: A tool to visualize and validate quantitative proteomics data from different sources (2010) (40)
Up-to-Date Workflow for Plant (Phospho)proteomics Identifies Differential Drought-Responsive Phosphorylation Events in Maize Leaves. (2016) (40)
Protein processing and other modifications analyzed by diagonal peptide chromatography. (2006) (40)
PP2A-3 interacts with ACR4 and regulates formative cell division in the Arabidopsis root (2016) (40)
SnRK2 Protein Kinases and mRNA Decapping Machinery Control Root Development and Response to Salt1[OPEN] (2019) (40)
The calcium-binding protein p54/NEFA is a novel luminal resident of medial Golgi cisternae that traffics independently of mannosidase II. (2002) (40)
Probing the Efficiency of Proteolytic Events by Positional Proteomics* (2010) (39)
Glutaredoxin GRXS17 Associates with the Cytosolic Iron-Sulfur Cluster Assembly Pathway1[OPEN] (2016) (38)
ADAM30 Downregulates APP-Linked Defects Through Cathepsin D Activation in Alzheimer's Disease (2016) (38)
Protein aggregation as an antibiotic design strategy (2016) (38)
Proteome-derived Peptide Libraries to Study the Substrate Specificity Profiles of Carboxypeptidases* (2013) (38)
The proteome under translational control (2014) (38)
Human and mouse granzyme M display divergent and species-specific substrate specificities. (2011) (37)
The proteome of the human neuroblastoma cell line SH-SY5Y: an enlarged proteome. (2008) (37)
The substrate specificity profile of human granzyme A (2010) (37)
Glycosylation signatures in Drosophila: fishing with lectins. (2010) (36)
Degradomics Reveals That Cleavage Specificity Profiles of Caspase-2 and Effector Caspases Are Alike* (2012) (36)
Activation-associated secreted proteins are the most abundant antigens in a host protective fraction from Ostertagia ostertagi. (2003) (36)
Linking functions: an additional role for an intrinsically disordered linker domain in the transcriptional coactivator CBP (2017) (36)
Pick a Tag and Explore the Functions of Your Pet Protein. (2019) (35)
NBPF1, a tumor suppressor candidate in neuroblastoma, exerts growth inhibitory effects by inducing a G1 cell cycle arrest (2015) (35)
Proteomics methods to study methionine oxidation. (2014) (34)
Trapping mammalian protein complexes in viral particles (2016) (34)
Structural investigation of B-Raf paradox breaker and inducer inhibitors. (2015) (34)
High entomotoxicity and mechanism of the fungal GalNAc/Gal-specific Rhizoctonia solani lectin in pest insects. (2013) (34)
Effect of phospholipid molecular structure on its interaction with whey proteins in aqueous solution (2013) (34)
A protein-protein interaction map of the TNF-induced NF-κB signal transduction pathway (2018) (33)
Natural substrates of plant proteases: how can protease degradomics extend our knowledge? (2012) (33)
A new functional, chemical proteomics technology to identify purine nucleotide binding sites in complex proteomes. (2006) (33)
Implementation and application of a versatile clustering tool for tandem mass spectrometry data (2007) (33)
The iceLogo web server and SOAP service for determining protein consensus sequences (2015) (33)
N-terminal Proteomics Assisted Profiling of the Unexplored Translation Initiation Landscape in Arabidopsis thaliana * (2017) (32)
A Role for Human N-alpha Acetyltransferase 30 (Naa30) in Maintaining Mitochondrial Integrity* (2016) (32)
Contemporary positional proteomics strategies to study protein processing. (2013) (31)
Investigation of rifampicin resistance mechanisms in Brucella abortus using MS-driven comparative proteomics. (2012) (31)
A catalogue of putative HIV-1 protease host cell substrates (2012) (31)
Seed germination in parasitic plants: what insights can we expect from strigolactone research? (2018) (30)
Noncoding after All: Biases in Proteomics Data Do Not Explain Observed Absence of lncRNA Translation Products. (2017) (30)
Analysis of the transthyretin-like (TTL) gene family in Ostertagia ostertagi--comparison with other strongylid nematodes and Caenorhabditis elegans. (2008) (30)
Arabidopsis thaliana RNase H2 Deficiency Counteracts the Needs for the WEE1 Checkpoint Kinase but Triggers Genome Instability[C][W] (2014) (30)
An aspartyl protease inhibitor of Ostertagia ostertagi: molecular cloning, analysis of stage and tissue specific expression and vaccine trial. (2005) (30)
The actin propulsive machinery: the proteome of Listeria monocytogenes tails. (2008) (29)
Substrate specificities of the granzyme tryptases A and K. (2014) (29)
Applications of diagonal chromatography for proteome‐wide characterization of protein modifications and activity‐based analyses (2007) (29)
Early Targets of miR-34a in Neuroblastoma* (2014) (29)
Four stage liquid chromatographic selection of methionyl peptides for peptide-centric proteome analysis: the proteome of human multipotent adult progenitor cells. (2006) (28)
Analysis of proteins in Chlamydia trachomatis L2 outer membrane complex, COMC. (2009) (28)
Targeted Proteomics for Studying Pathogenic Bacteria (2019) (28)
GalNAc/Gal-Binding Rhizoctonia solani Agglutinin Has Antiproliferative Activity in Drosophila melanogaster S2 Cells via MAPK and JAK/STAT Signaling (2012) (28)
Protein N-terminal Acetyltransferases Act as N-terminal Propionyltransferases In Vitro and In Vivo* (2012) (28)
SCX charge state selective separation of tryptic peptides combined with 2D-RP-HPLC allows for detailed proteome mapping. (2013) (27)
Early mannitol-triggered changes in the Arabidopsis leaf (phospho)proteome reveal growth regulators (2018) (27)
Compound A, a Selective Glucocorticoid Receptor Modulator, Enhances Heat Shock Protein Hsp70 Gene Promoter Activation (2013) (27)
Taximin, a conserved plant-specific peptide is involved in the modulation of plant-specialized metabolism. (2014) (27)
Temperature-induced changes in the wheat phosphoproteome reveal temperature-regulated interconversion of phosphoforms (2018) (27)
Gender-enriched transcription of activation associated secreted proteins in Ostertagia ostertagi. (2008) (27)
The Whats, the Wheres and the Hows of strigolactone action in the roots (2016) (27)
A comparison of the HUPO Brain Proteome Project pilot with other proteomics studies (2006) (26)
The Response of the Root Proteome to the Synthetic Strigolactone GR24 in Arabidopsis* (2016) (26)
The Apaf-1-binding protein Aven is cleaved by Cathepsin D to unleash its anti-apoptotic potential (2012) (25)
Structure of granzyme C reveals an unusual mechanism of protease autoinhibition (2009) (25)
Cell_motility: a cross-platform, open source application for the study of cell motion paths (2006) (25)
Combining quantitative proteomics data processing workflows for greater sensitivity (2011) (25)
Deregulation of focal adhesion formation and cytoskeletal tension due to loss of A-type lamins (2017) (25)
Improving the identification rate of endogenous peptides using electron transfer dissociation and collision-induced dissociation. (2013) (24)
CYP707As are effectors of karrikin and strigolactone signaling pathways in Arabidopsis thaliana and parasitic plants. (2019) (24)
m-Calpain activation in vitro does not require autolysis or subunit dissociation. (2011) (24)
Quantitative Proteome Profiling of C. burnetii under Tetracycline Stress Conditions (2012) (24)
RIBAR and xRIBAR: Methods for reproducible relative MS/MS-based label-free protein quantification. (2011) (24)
Xilmass: A New Approach toward the Identification of Cross-Linked Peptides. (2016) (24)
C-terminomics Screen for Natural Substrates of Cytosolic Carboxypeptidase 1 Reveals Processing of Acidic Protein C termini* (2014) (24)
Salmonella Typhi, Paratyphi A, Enteritidis and Typhimurium core proteomes reveal differentially expressed proteins linked to the cell surface and pathogenicity (2019) (23)
Assessing a novel microfluidic interface for shotgun proteome analyses. (2007) (23)
N-Terminal Proteoforms in Human Disease. (2020) (22)
Pollens destroy respiratory epithelial cell anchors and drive alphaherpesvirus infection (2019) (22)
A phylogenetic approach to study the origin and evolution of the CRINKLY4 family (2015) (22)
Dehydrin ERD14 activates glutathione transferase Phi9 in Arabidopsis thaliana under osmotic stress. (2019) (22)
Resolution of protein structure by mass spectrometry. (2016) (22)
Development of an enzyme-linked immunosorbent assay for detection of cellular and in vivo LRRK2 S935 phosphorylation. (2013) (22)
Developmental Plasticity at High Temperature1[OPEN]. (2019) (21)
N-terminal Acetylation Levels Are Maintained During Acetyl-CoA Deficiency in Saccharomyces cerevisiae* (2018) (21)
HyperISGylation of Old World Monkey ISG15 in Human Cells (2008) (21)
A comparison of MS2‐based label‐free quantitative proteomic techniques with regards to accuracy and precision (2011) (20)
Granzyme M targets topoisomerase II alpha to trigger cell cycle arrest and caspase-dependent apoptosis (2013) (20)
The autophagy receptor SQSTM1/p62 mediates anti-inflammatory actions of the selective NR3C1/glucocorticoid receptor modulator compound A (CpdA) in macrophages (2018) (20)
Identification of Serpinb6b as a Species-specific Mouse Granzyme A Inhibitor Suggests Functional Divergence between Human and Mouse Granzyme A (2014) (20)
Molecular analysis of astacin-like metalloproteases of Ostertagia ostertagi (2004) (20)
A Novel Receptor-mediated Regulation Mechanism of Type I Inositol Polyphosphate 5-Phosphatase by Calcium/Calmodulin-dependent Protein Kinase II Phosphorylation* (2001) (20)
The Online Protein Processing Resource (TOPPR): a database and analysis platform for protein processing events (2012) (19)
Proteome Profiling of Wheat Shoots from Different Cultivars (2017) (19)
Integrator restrains paraspeckles assembly by promoting isoform switching of the lncRNA NEAT1 (2020) (19)
Importance of extracellular vesicle secretion at the blood–cerebrospinal fluid interface in the pathogenesis of Alzheimer’s disease (2021) (19)
Interaction of α-Catulin with Dystrobrevin Contributes to Integrity of Dystrophin Complex in Muscle* (2012) (19)
Gold nanodome SERS platform for label-free detection of protease activity. (2017) (19)
Comparison of Free-Space and Waveguide-Based SERS Platforms (2019) (19)
Simple Peptide Quantification Approach for MS-Based Proteomics Quality Control (2020) (18)
Plant proteases and programmed cell death (2019) (18)
Organellar Omics—A Reviving Strategy to Untangle the Biomolecular Complexity of the Cell (2018) (18)
A new approach for mapping sialylated N-glycosites in serum proteomes. (2007) (18)
Identification by two-dimensional electrophoresis of a new adhesin expressed by a low-passaged strain of Mycoplasma bovis. (2005) (18)
Hybrid N-glycans on the host protective activation-associated secreted proteins of Ostertagia ostertagi and their importance in immunogenicity. (2008) (18)
Novel Techniques for Identification and Characterization of Proteins Loaded on Gels in Femtomole Amounts (1997) (18)
Multiple isoforms of the tumor suppressor myopodin are simultaneously transcribed in cancer cells. (2008) (18)
The Arabidopsis Iron-Sulfur Protein GRXS17 is a Target of the Ubiquitin E3 Ligases RGLG3 and RGLG4. (2016) (17)
In-gel N-acetylation for the quantification of the degree of protein in vivo N-terminal acetylation. (2013) (17)
Analysis of the translationally controlled tumour protein in the nematodes Ostertagia ostertagi and Caenorhabditis elegans suggests a pivotal role in egg production. (2009) (17)
UBP12 and UBP13 negatively regulate the activity of the ubiquitin-dependent peptidases DA1, DAR1 and DAR2 (2020) (17)
Disentanglement of protease substrate repertoires (2008) (17)
SFINX: Straightforward Filtering Index for Affinity Purification-Mass Spectrometry Data Analysis. (2016) (17)
Identification of potentially involved proteins in levofloxacin resistance mechanisms in Coxiella burnetii. (2011) (17)
Disulfide bond formation protects Arabidopsis thaliana glutathione transferase tau 23 from oxidative damage. (2017) (16)
An extra dimension in protein tagging by quantifying universal proteotypic peptides using targeted proteomics (2016) (16)
COFRADIC™: the Hubble telescope of proteomics (2004) (16)
Identification of Immune-Responsive Gene 1 (IRG1) as a Target of A20. (2018) (16)
Combination of COFRADIC and high temperature-extended column length conventional liquid chromatography: a very efficient way to tackle complex protein samples, such as serum. (2007) (16)
The tandem PDZ protein Syntenin interacts with the aminoacyl tRNA synthetase complex in a lysyl-tRNA synthetase-dependent manner. (2008) (16)
Robust sequential biophysical fractionation of blood plasma to study variations in the biomolecular landscape of systemically circulating extracellular vesicles across clinical conditions (2021) (16)
Selection of universal peptide biomarkers for the detection of the allergen hazelnut in food trough a comprehensive, high resolution mass spectrometric (HRMS) based approach. (2019) (15)
Structural analysis and identification of gel-purified proteins, available in the femtomole range, using a novel computer program for peptide sequence assignment, by matrix-assisted laser desorption ionization-reflectron time-of-flight-mass spectrometry. (1996) (15)
Improved Glucocorticoid Receptor Ligands: Fantastic Beasts, but How to Find Them? (2020) (15)
Isolation of protein complexes from the model legume Medicago truncatula by tandem affinity purification in hairy root cultures. (2016) (15)
A case study on the comparison of different software tools for automated quantification of peptides. (2011) (15)
The C-terminus of CIS defines its interaction pattern. (2007) (15)
The growing story of (ARABIDOPSIS) CRINKLY 4. (2016) (15)
Integrator restrains paraspeckles assembly by promoting isoform switching of the lncRNA NEAT1. (2020) (15)
A stringent approach to improve the quality of nitrotyrosine peptide identifications (2011) (14)
Bacterial Genetic Engineering by Means of Recombineering for Reverse Genetics (2020) (14)
T-cell receptor-induced JNK activation requires proteolytic inactivation of CYLD by MALT 1 (2011) (14)
Conservation of the Extended Substrate Specificity Profiles Among Homologous Granzymes Across Species* (2013) (14)
Proteomic approaches to identify substrates of the three Deg/HtrA proteases of the cyanobacterium Synechocystis sp. PCC 6803. (2015) (14)
Selection of egg peptide biomarkers in processed food products by high resolution mass spectrometry. (2019) (14)
A Phelipanche ramosa KAI2 protein perceives strigolactones and isothiocyanates enzymatically (2021) (14)
MSqRob takes the missing hurdle: uniting intensity- and count-based proteomics. (2020) (14)
Gel-Free Proteomics (2011) (14)
Proteogenomics in Aid of Host–Pathogen Interaction Studies: A Bacterial Perspective (2017) (14)
The CEP5 Peptide Promotes Abiotic Stress Tolerance, As Revealed by Quantitative Proteomics, and Attenuates the AUX/IAA Equilibrium in Arabidopsis (2020) (14)
Mechanisms of Congenital Heart Disease Caused by NAA15 Haploinsufficiency (2021) (14)
GSyellow, a Multifaceted Tag for Functional Protein Analysis in Monocot and Dicot Plants1[OPEN] (2018) (13)
Quantitative Tandem Affinity Purification, an Effective Tool to Investigate Protein Complex Composition in Plant Hormone Signaling: Strigolactones in the Spotlight (2018) (13)
Analyzing trapped protein complexes by Virotrap and SFINX (2017) (13)
The membrane-localized protein kinase MAP4K4/TOT3 regulates thermomorphogenesis (2021) (13)
A SMALL HEAT SHOCK PROTEIN OF OSTERTAGIA OSTERTAGI: STAGE-SPECIFIC EXPRESSION, HEAT INDUCIBILITY, AND PROTECTION TRIAL (2006) (13)
High-resolution mass spectrometry-based selection of peanut peptide biomarkers considering food processing and market type variation. (2020) (12)
Mass spectrometry-driven proteomics: an introduction. (2011) (12)
Reverse-phase diagonal chromatography for phosphoproteome research. (2009) (12)
The Arabidopsis Metacaspase 9 Degradome (2013) (12)
Plant hormone signalling through the eye of the mass spectrometer (2015) (12)
Proteomic and metabolomic responses to connexin43 silencing in primary hepatocyte cultures (2013) (12)
Study of Protein Expresion in Peri-Infarct Tissue after Cerebral Ischemia (2015) (12)
Asn3, a reliable, robust, and universal lock mass for improved accuracy in LC-MS and LC-MS/MS. (2013) (12)
The Transcriptional Repressor Glis 2 Is a Novel Binding Partner for p 120 Catenin (2007) (12)
RIPK4 activity in keratinocytes is controlled by the SCFβ-TrCP ubiquitin ligase to maintain cortical actin organization (2018) (12)
Gel-free proteomics : methods and protocols (2011) (11)
Study of the whole cell lysate of two Coxiella burnetii strains using N-terminomics. (2012) (11)
Expanding the Interactome of TES by Exploiting TES Modules with Different Subcellular Localizations. (2017) (11)
Developmental Plasticity at High Temperature1[OPEN] (2019) (11)
A Well-Controlled BioID Design for Endogenous Bait Proteins. (2018) (11)
Sample preparation procedures for ultrasensitive protein identification by PSD-MALDI-TOF mass spectrometry. (1998) (11)
Identification and characterization of a novel specific secreted protein family for selected members of the subfamily Ostertagiinae (Nematoda) (2007) (11)
An AKT2-specific nanobody that targets the hydrophobic motif induces cell cycle arrest, autophagy and loss of focal adhesions in MDA-MB-231 cells. (2021) (10)
Evolutionarily conserved and species-specific glycoproteins in the N-glycoproteomes of diverse insect species. (2018) (10)
Phosphoproteomics-based peptide ligand-receptor kinase pairing. Commentary on: “A peptide hormone and its receptor protein kinase regulate plant cell expansion” (2015) (10)
Targeting of Aminopeptidase I to the Yeast Vacuole Is Mediated by Ssa1p, a Cytosolic Member of the 70-kDa Stress Protein Family* (2000) (10)
Mass Spectrometry in Noncovalent Protein Interactions and Protein Assemblies (2006) (9)
Extracellular peptide Kratos restricts cell death during vascular development and stress in Arabidopsis (2019) (9)
The final maturation state of β-actin involves N-terminal acetylation by NAA80 not N-terminal arginylation by ATE1 (2021) (9)
FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes. (2020) (9)
Challenges in the Structural-Functional Characterization of Multidomain, Partially Disordered Proteins CBP and p300: Preparing Native Proteins and Developing Nanobody Tools. (2018) (9)
New Strategies in High Sensitivity Characterization of Proteins Separated from 1-D or 2-D Gels (1995) (9)
Protein processing characterized by a gel-free proteomics approach. (2008) (9)
MSqRob takes the missing hurdle: uniting intensity- and count-based proteomics (2019) (9)
Mass spectrometry and the cellular surfaceome. (2021) (9)
Intelligent Mixing of Proteomes for Elimination of False Positives in Affinity Purification-Mass Spectrometry. (2016) (9)
A Phelipanche ramosa KAI2 Protein Perceives enzymatically Strigolactones and Isothiocyanates (2020) (9)
Construction and analysis of a human testis/sperm-enriched interaction network: Unraveling the PPP1CC2 interactome. (2017) (9)
HIV-1 Vpr N-terminal tagging affects alternative splicing of the viral genome (2016) (9)
Holistic view on the extended substrate specificities of orthologous granzymes. (2014) (8)
A reproducibility‐based evaluation procedure for quantifying the differences between MS/MS peak intensity normalization methods (2011) (8)
Who gets cut during cell death? (2010) (8)
Activation of ADF/cofilin by phosphorylation-regulated Slingshot phosphatase is required for the meiotic spindle assembly in Xenopus laevis oocytes (2013) (8)
The ROS Wheel : Re fi ning ROS Transcriptional Footprints 1 (2016) (8)
Protease Substrate Profiling by N-Terminal COFRADIC. (2017) (8)
The chlorosome of Chlorobaculum tepidum: Size, mass and protein composition revealed by electron microscopy, dynamic light scattering and mass spectrometry‐driven proteomics (2011) (8)
The Plant PTM Viewer, a central resource exploring plant protein modifications. From site-seeing to protein function (2018) (8)
Unraveling persistent host cell infection with Coxiella burnetii by quantitative proteomics. (2011) (8)
Comparative study of concatemer efficiency as an isotope-labelled internal standard for allergen quantification. (2020) (7)
Peanut Stunt Virus and Its Satellite RNA Trigger Changes in Phosphorylation in N. benthamiana Infected Plants at the Early Stage of the Infection (2018) (7)
Proteomics in the genome engineering era (2016) (7)
Glutaredoxin GRXS 17 Associates with the Cytosolic Iron-Sulfur Cluster Assembly Pathway 1 [ OPEN ] (2016) (7)
Waveguide-based surface-enhanced Raman spectroscopy detection of protease activity using non-natural aromatic amino acids. (2020) (7)
Proteome profiling of the green sulfur bacterium Chlorobaculum tepidum by N‐terminal proteomics (2012) (7)
Quantitative proteomics and systems analysis of cultured H9C2 cardiomyoblasts during differentiation over time supports a 'function follows form' model of differentiation. (2018) (7)
Selective Glucocorticoid Receptor Properties of GSK866 Analogs with Cysteine Reactive Warheads (2017) (7)
Proceedings of the Frontiers of Retrovirology Conference 2016 (2016) (7)
Unraveling the specificities of the different human methionine sulfoxide reductases (2014) (7)
Limited Proteolysis Combined with Stable Isotope Labeling Reveals Conformational Changes in Protein (Pseudo)kinases upon Binding Small Molecules. (2015) (7)
Prune-1 drives polarization of tumor-associated macrophages (TAMs) within the lung metastatic niche in triple-negative breast cancer (2020) (7)
Integrated proteomic analysis reveals a substantial enrichment of protein trafficking processes in hippocampus tissue after hypoxic stress. (2010) (7)
Design and visualization of second‐generation cyanoisoindole‐based fluorescent strigolactone analogs (2019) (6)
Importance of extended protease substrate recognition motifs in steering BNIP-2 cleavage by human and mouse granzymes B (2014) (6)
Unraveling the MAX2 Protein Network in Arabidopsis thaliana: Identification of the Protein Phosphatase PAPP5 as a Novel MAX2 Interactor (2020) (6)
How many spots with missing values can be tolerated in quantitative two-dimensional gel electrophoresis when applying univariate statistics? (2012) (6)
The Proteolytic Landscape of an Arabidopsis Separase-Deficient Mutant Reveals Novel Substrates Associated With Plant Development (2017) (6)
Use of Hybrid Data-Dependent and -Independent Acquisition Spectral Libraries Empowers Dual-Proteome Profiling (2021) (6)
Development and characterization of protein kinase B/AKT isoform-specific nanobodies (2020) (6)
Preparation of Arabidopsis thaliana seedling proteomes for identifying metacaspase substrates by N-terminal COFRADIC. (2014) (6)
N-glycosylation Site Analysis Reveals Sex-related Differences in Protein N-glycosylation in the Rice Brown Planthopper (Nilaparvata lugens)* (2020) (6)
HPLC-based quantification of in vitro N-terminal acetylation. (2013) (5)
Protein amino-termini and how to identify them (2020) (5)
Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling (2022) (5)
A new generation of AD biomarkers: 2019 to 2021 (2022) (5)
Morais Activity via NdufA 10 Ubiquinone Uncoupling PINK 1 Loss-of-Function Mutations Affect Mitochondrial Complex (2014) (5)
Limited Evidence for Protein Products of Noncoding Transcripts in the HEK293T Cellular Cytosol (2022) (4)
Proteome-derived Peptide Libraries Allow Detailed Analysis of the Substrate Specificities of N (cid:1) -acetyltransferases and Point to hNaa10p as the Post-translational Actin N (cid:1) -acetyltransferase* □ S (2020) (4)
N-glycosylation Site Analysis Reveals Sex-related Differences in Protein N-glycosylation in the Rice Brown Planthopper (Nilaparvata lugens). (2020) (4)
The CEP5 Peptide Promotes Abiotic Stress Tolerance, As Revealed by Quantitative Proteomics, and Attenuates the AUX/IAA Equilibrium in Arabidopsis. (2020) (4)
A well-ordered nanoflow LC-MS/MS approach for proteome profiling using 200 cm long micro pillar array columns (2018) (4)
Caught green-handed: methods for in vivo detection and visualization of protease activity. (2019) (4)
Transferring an optimized TAP-toolbox for the isolation of protein complexes to a portfolio of rice tissues (2016) (4)
Erratum: MS‐driven protease substrate degradomics (2010) (4)
Proteolytic cleavage of the Chlamydia pneumoniae major outer membrane protein in the absence of Pmp10 (2007) (4)
GSyellow , a Multifaceted Tag for Functional Protein Analysis in 11 Monocot and Dicot Plants (2018) (4)
Identification of Carboxypeptidase Substrates by C-Terminal COFRADIC. (2017) (4)
Binding of Orysata lectin induces an immune response in insect cells (2021) (4)
The expa1-1 mutant reveals a new biophysical lateral root organogenesis checkpoint (2018) (3)
Variable Glutamine-Rich R epeats Modulate Transcription Factor Activity Graphical (2015) (3)
How has urinary proteomics contributed to the discovery of early biomarkers of acute kidney injury? (2014) (3)
In-Gel Digestion of Protein Spots for Mass Spectrometry (2006) (3)
The deubiquitinating enzymes UBP12 and UBP13 negatively regulate the activity of the ubiquitin-dependent peptidases DA1, DAR1 and DAR2 (2019) (3)
An Organellar Na-Acetyltransferase, Naa60, Acetylates Cytosolic N Termini of Transmembrane Proteins and Maintains Golgi Integrity.pptx (2015) (3)
Time‐dependent expression and processing of a hypothetical protein of possible importance for regulation of the Chlamydia pneumoniae developmental cycle (2001) (3)
The use of hybrid data-dependent and -independent acquisition spectral libraries empower dual-proteome profiling (2020) (3)
Digging deeper into the human proteome: A novel nanoflow LCMS setup using micro pillar array columns (μPAC™) (2018) (3)
Membrane proteome of the green sulfur bacterium Chlorobium tepidum (syn. Chlorobaculum tepidum) analyzed by gel-based and gel-free methods (2010) (3)
The lectin Orysata induces phosphatase-mediated and carbohydrate-independent aggregation of insect cells. (2021) (3)
PepShell: visualization of conformational proteomics data. (2015) (2)
RIPK4 activity in keratinocytes is controlled by the SCFβ-TrCP ubiquitin ligase to maintain cortical actin organization (2018) (2)
The neural cell adhesion molecules L1 and CHL1 are cleaved by BACE1 protease in vivo. (2012) (2)
Complementary peptides represent a credible alternative to agrochemicals by activating translation of targeted proteins (2023) (2)
The neural cell adhesion molecules L1 and CHL1 are cleaved by BACE1 protease in vivo (Journal of Biological Chemistry (2012) 287, (25927-25940)) (2012) (2)
Adaptor protein complex interaction map in Arabidopsis identifies P34 as a common stability regulator (2023) (2)
Towards SERS-based on-chip detection of protease activity using nanoplasmonic slot waveguides (2018) (2)
Proteome Analysis of Arabidopsis Roots. (2018) (2)
Mass spectrometry-based clinical proteomics – a revival (2021) (2)
Diagonal chromatography to study plant protein modifications. (2016) (2)
Cells Lacking (cid:1) -Actin are Genetically Reprogrammed and Maintain Conditional Migratory Capacity* (2012) (2)
N-terminal acetylation shields proteins from degradation and promotes age-dependent motility and longevity (2022) (2)
Techniques for sample preparation including methods for concentrating peptide samples. (2000) (2)
Characterization of the γ-secretase subunit interactome in Arabidopsis thaliana (2019) (2)
The Use of Proteomics to Identify and Characterize Cell Death Proteins (2005) (1)
Transcriptional Analysis in the Arabidopsis Roots Reveals New Regulators that Link rac-GR24 Treatment with Changes in Flavonol Accumulation, Root Hair Elongation and Lateral Root Density. (2021) (1)
Author Correction: The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis (2018) (1)
Novel assays monitoring direct glucocorticoid receptor protein activity exhibit high predictive power for ligand activity on endogenous gene targets (2022) (1)
SAMBA controls the rate of cell division in maize development through APC/C interaction (2021) (1)
Protein Characterization: Analytical Approaches and Applications to Proteomics (2006) (1)
Nongel-Based Proteomics: Selective Reversed-Phase Chromatographic Isolation of Methionine-Containing Peptides from Complex Peptide Mixtures (2006) (1)
Confounding factors of ultrafiltration and protein analysis in extracellular vesicle research (2017) (1)
A nanobody targeting the F-actin capping protein CapG restrains breast cancer metastasis (2013) (1)
N‐Terminal Combined Fractional Diagonal Chromatographic (COFRADIC) Analysis of the Human Platelet Proteome (2011) (1)
Abstract 5506: SOX11 acts as part of the MYCN-WEE1 regulatory protein complex implicated in neuroblastoma (2017) (1)
Early mannitol-triggered changes in the Arabidopsis leaf (phospho)proteome (2018) (1)
Caspase-14 is a crucial protease in proper stratum corneum formation (2008) (1)
PRIDE: The proteomics identifications database (vol. 5, Issue 13, pp. 3537‐3545) (1)
Temperature-induced changes in wheat phosphoproteome reveal temperature-regulated interconversion of phosphoforms (2018) (1)
Recombinant extracellular vesicles : biological reference material to standardize extracellular vesicle research (2018) (1)
Platelet Proteomics and its Applications to Study Platelet-Related Disorders (2017) (1)
The deubiquitinase USP15 antagonizes Parkin-mediated mitophagy (2012) (1)
Proteome-wide cellular thermal shift assay reveals novel crosstalk between brassinosteroid and auxin signaling (2021) (1)
Identification and characterization of filaggrin as a caspase-14 substrate (2007) (1)
Structure-function analysis of a calcium-independent metacaspase reveals a novel proteolytic pathway for lateral root emergence (2023) (1)
Mechanistic insight into RET kinase inhibitors targeting the DFG-out conformation in RET-rearranged cancer (2017) (1)
Mutation of Arabidopsis SME1 and Sm core assembly improves oxidative stress resilience (2022) (1)
Selecting processing robust markers using high resolution mass spectrometry for the detection of milk in food products. (2021) (1)
Effect of sodium nitrite on protein oxidation in pork myofibrillar proteins (2013) (1)
Corrigendum to “Hybrid N-glycans on the host protective activation-associated secreted proteins of Ostertagia ostertagi and their importance in immunogenicity” [Mol. Biochem. Parasitol. 161 (1) (2008) 67–71] (2009) (1)
Front Cover: Organellar Omics – A Reviving Strategy to Untangle the Biomolecular Complexity of the Cell (2018) (1)
A simple approach for accurate peptide quantification in MS-based proteomics (2019) (0)
Identification of a deubiquitinase that antagonizes Parkin-mediated mitochondrial ubiquitination and mitophagy (2014) (0)
Quantitative proteomics reveals differential effects of ZMPSTE24 and LMNA knockdown on human fibroblasts (2014) (0)
Mapping the adaptor protein complex interaction network in Arabidopsis identifies P34 as a common stability regulator (2022) (0)
Metabolic regulation of N-terminal acetylation in Saccharomyces cerevisiae (2015) (0)
Annotated Spectra for Vu, Stes et al (2016) (0)
ARABIDOPSIS THALIANA GSTU23, GSH bound (2018) (0)
α-1,6-fucosyltransferase plays a critical role during embryogenesis of the hemimetabolous insect Nilaparvata lugens. (2023) (0)
Abnormal concentrations of acetylated amino acids in cerebrospinal fluid in acetyl‐CoA transporter deficiency (2022) (0)
The RING E3 ligase KEEP ON GOING modulates JAZ12 stability (2015) (0)
Multi-Allergen Quantification in Food Using Concatemer-Based Isotope Dilution Mass Spectrometry: A Collaborative Study. (2023) (0)
Complex in Muscle Contributes to Integrity of Dystrophin-Catulin with Dystrobrevin α Interaction of Molecular Bases of Disease : (2012) (0)
Towards mulitplexed SERS-based on-chip detection on protease activity (2018) (0)
Mapping protein N-Glycosylation by COFRADIC (2009) (0)
An Organellar N a-Acetyltr ansferase , Naa 60 , Acetylates Cytosolic N Termini of Transmembrane Proteins and Maintains Golgi Integrity Graphical (2015) (0)
Analyzing repeated measures designs in label-free proteomics with MSqRob (MCP 2016 15(2):657-68.) (2017) (0)
Activation of stroma-derived matrix metalloproteinases (MMPs) in a model of gastric cancer (2013) (0)
Protein Perceives enzymatically Strigolactones and 1 Isothiocyanates 2 (2020) (0)
Targeted peptide-centric protemics: a versatile tool for quantitative proteomics (2006) (0)
The Whats, the Wheres and the Hows of strigolactone action in the roots (2016) (0)
High-throughput proteome analysis using 50 cm long micro pillar arraycolumns (µPAC) (2019) (0)
IL-29 Is proteomics heading towards medicine? (2003) (0)
mir-17-92 is a master regulator of TGFβ-pathway activity in neuroblastoma (2010) (0)
Sensing thiol oxidation in Arabidopsis thaliana through a YAP1 genetically encoded probe (2013) (0)
N-Terminal Acetylome Analysis Reveals an Expanded Substrate Profile for the Natc N-Terminal Acetyltransferase Complex in Yeast (2022) (0)
A well-controlled BioID design for endogenous bait proteins (2018) (0)
Protein interactors of 3-O sulfated heparan sulfates in human MCI and age-matched control cerebrospinal fluid (2023) (0)
Reduced Levels of Misfolded and Aggregated Mutant p53 by Proteostatic Activation (2020) (0)
(P3) Boosting Proteome Complexity by N-terminal Acetylation of Proteins (2012) (0)
A leap over the hurdle in label-free quantitative proteomics (2017) (0)
A method for identifying drug targets (2003) (0)
An ADAM protein as a new actor of the APP metabolism (2013) (0)
Quantification of allergens in processed food products: selection of peptide biomarkers by high resolution mass spectrometry (2018) (0)
Characterization of the γ-secretase subunit interactome in Arabidopsis thaliana (2019) (0)
Motoneuronsd Synaptic Currents in Brain Stem and Glycine A Differential Effects of Ethanol on GABA (2015) (0)
Expanded in vivo substrate profile of the yeast N-terminal acetyltransferase NatC (2022) (0)
prolyl 3-hydroxylation identification of the splice form responsible for mutations : clinical documentation andLEPRE 1 Recessive osteogenesis imperfecta caused (2009) (0)
Author response: UBP12 and UBP13 negatively regulate the activity of the ubiquitin-dependent peptidases DA1, DAR1 and DAR2 (2020) (0)
MSqRob: analysis of label-free proteomics data in an R/Shiny environment (2017) (0)
Pollens destroy respiratory epithelial cell anchors and drive alphaherpesvirus infection (2019) (0)
Vpr content of HIV-1 virions determines infection of resting peripheral blood CD4+ lymphocytes (2013) (0)
Machine Learning on Large-Scale Proteomics Data Identifies Tissue and Cell-Type Specific Proteins (2022) (0)
Parkin mediates mitophagy through interaction with Ambra1 (2010) (0)
Characterization of the tumor phenotype of Protein Phosphatase 2A PR61/B'delta knockout mice (2010) (0)
Unravelling the RIP4 signaling pathway to NF-kappa B (2008) (0)
Seed Longevity is Controlled by Metacaspases (2023) (0)
Triazolinedione protein modification: from an overlooked off-target effect to a tryptophan-based bioconjugation strategy (2022) (0)
Function of the translationally controlled tumor protein in Ostertagia ostertagi and Caenorhabditis elegans (2008) (0)
A Strong Cation Exchange Chromatography Protocol for Examining N-Terminal Proteoforms. (2022) (0)
Differential dynamic proteome analysis of the oxidative stress response in Arabidopsis wild type and catalase mutants (2013) (0)
Proceedings of the Frontiers of Retrovirology Conference 2016 (2016) (0)
An ASP-like protein is the most abundant antigen in a host protective fraction from Ostertagia ostertagi (2002) (0)
Study of the kinase switch mechanism in B-RAF upon small molecule binding via mass spectrometry (2013) (0)
Erratum: ms_lims, a simple yet powerful open source laboratory information management system for MS‐driven proteomics (0)
Macrophage Resistance to Ionizing Radiation Exposure Is Accompanied by Decreased Cathepsin D and Increased Transferrin Receptor 1 Expression (2022) (0)
acsOmega RGB jca logo.eps (0)
Identification of confounding factors of EV isolation and protein analysis (2017) (0)
Towards SERS-based multiplexed monitoring of protease activity using non-natural aromatic amino acids (2020) (0)
Transferring an optimized TAP-toolbox for the isolation of protein complexes to a portfolio of rice tissues (2016) (0)
The growing story of ( ARABIDOPSIS ) CRINKLY 4 1 2 (2016) (0)
Robust peptide-based models in quantitative proteomics (2015) (0)
Deregulation of focal adhesion and cytoskeletal tension due to loss of A-type lamins (2017) (0)
Omics in Aid of Host-pathogen Interaction Studies: A Bacterial Perspective (2017) (0)
RNAi of Mannosidase-Ia in the Colorado potato beetle and changes in the midgut and peritrophic membrane. (2022) (0)
Parkin interacts with Ambra1 to induce mitophagy (award for best poster presentation) (2011) (0)
MOLECULAR ANALYSIS OF TAU IN RODENT AND NON-RODENT MODELS OF AD (2014) (0)
Method and device for gel-free qualitative proteomic analysis and their uses (2002) (0)
OMICS views on protein N‐terminal biology (2015) (0)
Hydrogen plasma cleaning of gold plasmonic nanostructures for better reproducibility of SERS spectra (2019) (0)
Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins (2023) (0)
Molecular cloning and characterization of four developmentally regulated metalloproteases from Ostertagia ostertagi (2004) (0)
Vpr content of HIV-1 virions determines infection of resting peripheral blood CD4+ lymphocytes (2013) (0)
THE IMPORTANCE OF UBIQUITINATION IN PLANTS (2016) (0)
ARABIDOPSIS THALIANA GSTU23, reduced (2018) (0)
Limited, but potentially functional translation of non-coding transcripts in the HEK293T cellular cytosol (2021) (0)
WWP2 controls endothelial permeability by regulating the RAP1–RADIL signaling pathway (2016) (0)
Confounding factors in extracellular vesicle ultrafiltration and protein analysis (2017) (0)
Structural insight in peptidyl substrate binding to cysteine cathepsins (2019) (0)
Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase (2019) (0)
Proteomic and metabolomic responses to connexin43 silencing in primary hepatocyte cultures (2012) (0)
N-terminal proteoforms may engage in different protein complexes (2023) (0)
Methods in Protein Structural Analysis 2006 Posttranslational modifications : analysis and function (2006) (0)
An omics strategy to unravel the role of the β2-adrenergic receptor in inflammation (2016) (0)
Late Breaker Oral Presentation Sessions (2017) (0)
The structure of the N-terminal domain of human clathrin heavy chain 1 (nTD) in complex with ES9 (2019) (0)
Peptide-level robust ridge regression modeling improves both sensitivity and specificity in quantitative proteomics (2015) (0)
Protein modifications targetable by diagonal chromatography (2007) (0)
Author Correction: Listeria monocytogenes impairs SUMOylation for efficient infection (2020) (0)
Abstract A14: Mutations in the ubiquitin ligase adaptor LZTR1 drive human disease by dysregulating RAS ubiquitination and signaling (2020) (0)
Employing non-targeted interactomics approach and subcellular fractionation to increase our understanding of the ghost proteome (2023) (0)
Correction to Structural Investigation of B-Raf Paradox Breaker and Inducer Inhibitors. (2016) (0)
A novel proteomic technique to identify new diagnostic biomarkers for malignant pleural mesothelioma: a feasibility study (2021) (0)
The use of proteomics in the study of cell death (2004) (0)
Importance of extracellular vesicle secretion at the blood–cerebrospinal fluid interface in the pathogenesis of Alzheimer’s disease (2021) (0)
Endogenous Parkin and Ambra1 interact in neural cells to mediate mitophagy (2011) (0)
Chemical Genetics Approach Identifies Abnormal Inflorescence Meristem 1 as a Putative Target of a Novel Sulfonamide That Protects Catalase2-Deficient Arabidopsis against Photorespiratory Stress (2020) (0)
Waveguide-based Detection of Protease Activity using Surface-Enhanced Raman Spectroscopy (2020) (0)
Quantitative proteomics reveals altered expression of actin binding proteins after LMNA knockdown in human dermal fibroblasts (2015) (0)
Linking functions: an additional role for an intrinsically disordered linker domain in the transcriptional coactivator CBP (2017) (0)
Virotrap as a novel method to study intracellular complexes of inflammatory proteins (2014) (0)
Molecular biochemical characterization of selective glucocorticoid receptor activities of GSK866 analogues with cysteine reactive warheads (2018) (0)
NBPF1, a tumor suppressor candidate in neuroblastoma, exerts growth inhibitory effects by inducing a G1 cell cycle arrest (2015) (0)
Defining a new diagnostic biomarker panel for malignant pleural mesothelioma using a novel proteomic technique (2022) (0)
Protein Conjugation with Triazolinediones: Switching from a General Tyrosine-Selective Labeling Method to a Highly Specific Tryptophan Bioconjugation Strategy (2021) (0)
Dual proteome view on Salmonella infection (2023) (0)
Lncipedia: a novel database for annotated lncRNA sequences and structures (2012) (0)
Development and Validation of a Quantitative Method for Multiple Allergen Detection in Food Using Concatemer-Based Isotope Dilution Mass Spectrometry. (2022) (0)

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