Pavel Jelínek

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Pavel Jelínek is affiliated with the following schools: Palacký University Olomouc, Charles University, Osaka University

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Pavel Jelínek

Physics

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#11268

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Physics

Pavel Jelínek's Degrees

PhD Physics Charles University
Masters Physics Charles University
Bachelors Physics Charles University

Why Is Pavel Jelínek Influential?

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According to Wikipedia, Pavel Jelínek is a Czech physicist, member of an international group of scientists , that for the first time chemically identified individual atoms using an atomic force microscope and quantum-mechanical computation. More specifically, they were able to image surface of an alloy at atomic resolution and successfully identify tin, lead and silicon atoms on this surface.

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Pavel Jelínek's Published Works

Number of citations in a given year to any of this author's works

Total number of citations to an author for the works they published in a given year. This highlights publication of the most important work(s) by the author

Published Works

Chemical identification of individual surface atoms by atomic force microscopy (2007) (562)
Mechanism of high-resolution STM/AFM imaging with functionalized tips (2014) (324)
Complex Patterning by Vertical Interchange Atom Manipulation Using Atomic Force Microscopy (2008) (209)
Multicenter approach to the exchange-correlation interactions in ab initio tight-binding methods (2004) (194)
Advances and applications in the FIREBALL ab initio tight‐binding molecular‐dynamics formalism (2011) (173)
The effect of hydration number on the interfacial transport of sodium ions (2018) (146)
New insights on atomic-resolution frequency-modulation Kelvin-probe force-microscopy imaging of semiconductors. (2009) (132)
Origin of High-Resolution IETS-STM Images of Organic Molecules with Functionalized Tips. (2014) (124)
Optimized atomic-like orbitals for first-principles tight-binding molecular dynamics (2007) (121)
Single atomic contact adhesion and dissipation in dynamic force microscopy. (2006) (118)
Atomically precise bottom-up synthesis of π-extended [5]triangulene (2019) (107)
Interplay of conductance, force, and structural change in metallic point contacts. (2011) (105)
Mechanism for room-temperature single-atom lateral manipulations on semiconductors using dynamic force microscopy. (2007) (91)
Weakly perturbative imaging of interfacial water with submolecular resolution by atomic force microscopy (2018) (89)
Mapping the electrostatic force field of single molecules from high-resolution scanning probe images (2016) (86)
‘All-inclusive’ imaging of the rutile TiO2(110) surface using NC-AFM (2009) (78)
Achieving high-quality single-atom nitrogen doping of graphene/SiC(0001) by ion implantation and subsequent thermal stabilization. (2014) (77)
Theoretical analysis of electronic band structure of 2- to 3-nm Si nanocrystals (2012) (72)
Forces and currents in carbon nanostructures: are we imaging atoms? (2011) (72)
From helical to planar chirality by on-surface chemistry. (2017) (71)
Chemical structure imaging of a single molecule by atomic force microscopy at room temperature (2015) (70)
First-principles simulations of STM images: From tunneling to the contact regime (2004) (68)
Direct Bandgap Silicon: Tensile‐Strained Silicon Nanocrystals (2014) (67)
Combined AFM and STM measurements of a silicene sheet grown on the Ag(111) surface (2013) (62)
Simultaneous current, force and dissipation measurements on the Si(111) 7×7 surface with an optimized qPlus AFM/STM technique (2012) (62)
Real topography, atomic relaxations, and short-range chemical interactions in atomic force microscopy: The case of the α − Sn ∕ Si ( 111 ) − ( 3 × 3 ) R 30 ° surface (2006) (61)
Tailoring topological order and π-conjugation to engineer quasi-metallic polymers (2019) (60)
High resolution SPM imaging of organic molecules with functionalized tips (2017) (58)
Control of Reactivity and Regioselectivity for On-Surface Dehydrogenative Aryl-Aryl Bond Formation. (2016) (56)
Structure and stability of semiconductor tip apexes for atomic force microscopy (2009) (55)
Graphene etching on SiC grains as a path to interstellar polycyclic aromatic hydrocarbons formation (2014) (55)
Non-covalent control of spin-state in metal-organic complex by positioning on N-doped graphene (2018) (54)
Structural and Electronic Properties of Nitrogen-Doped Graphene. (2016) (53)
Principles and simulations of high-resolution STM imaging with a flexible tip apex (2016) (52)
Theory of Chirality Induced Spin Selectivity: Progress and Challenges (2021) (50)
Hydrogen dissociation over Au nanowires and the fractional conductance quantum. (2005) (48)
Van der Waals interactions mediating the cohesion of fullerenes on graphene (2012) (44)
Understanding image contrast formation in TiO 2 with force spectroscopy (2012) (41)
Probing Charges on the Atomic Scale by Means of Atomic Force Microscopy. (2015) (41)
Atomic structure affects the directional dependence of friction. (2013) (40)
Tip-induced reduction of the resonant tunneling current on semiconductor surfaces. (2008) (39)
Recognition tunneling (2010) (38)
Submolecular Resolution Imaging of Molecules by Atomic Force Microscopy: The Influence of the Electrostatic Force. (2016) (38)
Electronegativity determination of individual surface atoms by atomic force microscopy (2017) (37)
Ab initio study of evolution of mechanical and transport properties of clean and contaminated Au nanowires along the deformation path (2008) (36)
Understanding atomic-resolved STM images on TiO2(110)-(1 × 1) surface by DFT calculations (2010) (35)
Strain-induced isomerization in one-dimensional metal-organic chains. (2019) (34)
Silicene versus two-dimensional ordered silicide: Atomic and electronic structure of Si-(√19 ×√19 )R23.4 ∘ /Pt(111) (2014) (34)
On-Surface Synthesis and Characterization of [7]Triangulene Quantum Ring. (2020) (33)
Electronic and Chemical Properties of Donor, Acceptor Centers in Graphene. (2015) (33)
Characteristic Contrast in Δfmin Maps of Organic Molecules Using Atomic Force Microscopy. (2016) (31)
Force mapping on a partially H-covered Si(111)-(7×7) surface: Influence of tip and surface reactivity (2013) (30)
On‐Surface Synthesis of Ethynylene‐Bridged Anthracene Polymers (2019) (29)
On-Surface Synthesis of Gold Porphyrin Derivatives via a Cascade of Chemical Interactions: Planarization, Self-Metalation, and Intermolecular Coupling (2019) (28)
Origin of contrast in STM images of oxygen on Pd(111) and its dependence on tip structure and tunneling parameters (2005) (27)
Role of tip chemical reactivity on atom manipulation process in dynamic force microscopy. (2013) (27)
Chemical identification of single atoms in heterogeneous III-IV chains on Si(100) surface by means of nc-AFM and DFT calculations. (2012) (26)
Ultrahigh-yield on-surface synthesis and assembly of circumcoronene into a chiral electronic Kagome-honeycomb lattice (2020) (26)
Potassium spectra in the 700–7000 cm-1 domain: Transitions involving f-, g-, and h-states (2012) (26)
Characterization of the mechanical properties of qPlus sensors (2013) (25)
‘Sub-atomic’ resolution of non-contact atomic force microscope images induced by a heterogeneous tip structure: a density functional theory study (2011) (24)
Na I spectra in the 1.4–14 micron range: transitions and oscillator strengths involving f-, g-, and h-states (2012) (24)
Real-space imaging of anisotropic charge of σ-hole by means of Kelvin probe force microscopy (2021) (23)
Submolecular Resolution by Variation of the Inelastic Electron Tunneling Spectroscopy Amplitude and its Relation to the AFM/STM Signal. (2017) (23)
Donor-Acceptor Properties of a Single-Molecule Altered by On-Surface Complex Formation. (2017) (22)
Iron-based trinuclear metal-organic nanostructures on a surface with local charge accumulation (2018) (22)
Unravelling the Open-Shell Character of Peripentacene on Au(111). (2020) (21)
Charge Redistribution and Transport in Molecular Contacts. (2015) (19)
Tailoring π-conjugation and vibrational modes to steer on-surface synthesis of pentalene-bridged ladder polymers (2020) (19)
Large Converse Piezoelectric Effect Measured on a Single Molecule on a Metallic Surface. (2018) (19)
Reversal of atomic contrast in scanning probe microscopy on (111) metal surfaces (2012) (18)
Interplay between Switching Driven by the Tunneling Current and Atomic Force of a Bistable Four-Atom Si Quantum Dot. (2015) (18)
Mechanical properties and electrical conductance of different Al nanowires submitted to an homogeneous deformation: a first-principles simulation (2004) (17)
Quantum degeneracy in atomic point contacts revealed by chemical force and conductance. (2013) (16)
Quantum dissipation driven by electron transfer within a single molecule investigated with atomic force microscopy (2020) (15)
Calculation of non-adiabatic coupling vectors in a local-orbital basis set. (2013) (15)
Diradical Organic One‐Dimensional Polymers Synthesized on a Metallic Surface (2020) (14)
Relation between the chemical force and the tunnelling current in atomic point contacts: a simple model (2012) (13)
Chemical Stability of (3,1)-Chiral Graphene Nanoribbons. (2021) (13)
Study of Ferrocene Dicarboxylic Acid on Substrates of Varying Chemical Activity (2016) (13)
Calculated photo-isomerization efficiencies of functionalized azobenzene derivatives in solar energy materials: azo-functional organic linkers for porous coordinated polymers (2015) (13)
Theoretical study of electronic and transport properties of PPy–Pt(111) and PPy–C(111):H interfaces (2010) (12)
Universal behaviour in the final stage of the breaking process for metal nanowires (2005) (12)
Slow Relaxation of Surface Plasmon Excitations in Au55: The Key to Efficient Plasmonic Heating in Au/TiO2. (2016) (12)
1D Coordination π-d Conjugated Polymers with Distinct Structures Defined by the Choice of the Transition Metal: Towards a New Class of Antiaromatic Macrocycles. (2020) (12)
Ortho and para hydrogen dimers on G/SiC(0001): combined STM and DFT study. (2015) (12)
Bonding Motifs in Metal-Organic Compounds on Surfaces. (2018) (12)
On-surface structural and electronic properties of spontaneously formed Tb2Pc3 single molecule magnets. (2018) (11)
Corrections to the density-functional theory electronic spectrum: copper phthalocyanine (2009) (11)
Room temperature discrimination of adsorbed molecules and attachment sites on the Si(111)-7 × 7 surface using a qPlus sensor. (2013) (11)
Local atomic and electronic structure of the Pb ∕ Si ( 111 ) mosaic phase: STM and ab initio study (2008) (11)
Aromatic Azide Transformation on the Ag(111) Surface Studied by Scanning Probe Microscopy. (2019) (10)
On‐Surface Bottom‐Up Synthesis of Azine Derivatives Displaying Strong Acceptor Behavior (2018) (10)
On-Surface Strain-Driven Synthesis of Nonalternant Non-Benzenoid Aromatic Compounds Containing Four- to Eight-Membered Rings. (2021) (9)
Mechano-Optical Switching of a Single Molecule with Doublet Emission. (2020) (8)
Experimental and theoretical studies of single Pb atom dynamics in one Si(1 1 1)-(7 × 7) unit cell (2003) (8)
Graphene on SiC(0001) inspected by dynamic atomic force microscopy at room temperature (2015) (8)
Identification of Surface Defects and Subsurface Dopants in a Delta-Doped System Using Simultaneous nc-AFM/STM and DFT (2014) (8)
Nitrous oxide as an effective AFM tip functionalization: a comparative study (2019) (8)
Chemisorption-Induced Formation of Biphenylene Dimer on Ag(111). (2021) (8)
Photo-induced reactions from efficient molecular dynamics with electronic transitions using the FIREBALL local-orbital density functional theory formalism (2014) (8)
Charge-state dynamics in electrostatic force spectroscopy (2016) (8)
Resolving Ambiguity of the Kondo Temperature Determination in Mechanically Tunable Single-Molecule Kondo Systems. (2018) (7)
Atomic Scale Control and Visualization of Topological Quantum Phase Transition in π‐Conjugated Polymers Driven by Their Length (2021) (7)
Initial and secondary oxidation products on the Si(111)-(7 × 7) surface identified by atomic force microscopy and first principles calculations (2014) (7)
Mechanical and electrical properties of stretched clean and H-contaminated Pd-nanowires (2008) (7)
Atomic and electronic properties of the Pb/Mo(110) adsorption system (2009) (7)
Visualizing designer quantum states in stable macrocycle quantum corrals (2021) (7)
Multiscale Analysis of Phase Transformations in Self-Assembled Layers of 4,4'-Biphenyl Dicarboxylic Acid on the Ag(001) Surface. (2020) (7)
Synthesis and characterization of peri-heptacene on a metallic surface. (2022) (6)
Emergence of state at Fermi level due to the formation of In-Sn heterodimers on Si(100)- 2 × 1 (2013) (6)
Si-substitutional defects on the a-Sn/Si(1 1 1)-( 3 3 ) surface (2004) (6)
Heterochiral recognition among functionalized heptahelicenes on noble metal surfaces. (2019) (6)
Atomic-Scale Charge Distribution Mapping of Single Substitutional p- and n-Type Dopants in Graphene (2020) (6)
Simultaneous nc-AFM/STM Measurements with Atomic Resolution (2015) (5)
Steering alkyne homocoupling with on-surface synthesized metal-organic complexes. (2020) (5)
Atomic cesium 6h states observed by time-resolved FTIR spectroscopy (2011) (5)
Force-Driven Single-Atom Manipulation on a Low-Reactive Si Surface for Tip Sharpening. (2015) (5)
Tuning the conductance of benzene-based single-molecule junctions (2016) (5)
Erratum: Origin of High-Resolution IETS-STM Images of Organic Molecules with Functionalized Tips [Phys. Rev. Lett. 113, 226101 (2014)] (2015) (5)
Controlling Single Molecule Conductance by a Locally Induced Chemical Reaction on Individual Thiophene Units (2020) (5)
Advances and applications in the FIREBALL ab initio tightbinding moleculardynamics formalism (2011) (5)
An Investigation of Ethylene Attachment to Si(111)–7 × 7 in the Restatom–Adatom Bridging Geometry: Electronic and Vibrational Properties (2011) (5)
Controlling Single Molecule Conductance by Chemical Reaction. (2020) (4)
On-Surface Synthesis of One-Dimensional Coordination Polymers with Tailored Magnetic Anisotropy. (2021) (4)
Controlling the stereospecific bonding motif of Au-thiolate links. (2019) (4)
Defect-Induced π-Magnetism into Non-Benzenoid Nanographenes (2022) (4)
On‐Surface Synthesis of Polyferrocenylene and its Single‐Chain Conformational and Electrical Transport Properties (2020) (4)
On‐Surface Synthesis of a Dicationic Diazahexabenzocoronene Derivative on the Au(111) Surface (2021) (4)
Circumventing the stability problems of graphene nanoribbon zigzag edges. (2021) (4)
Significance Of Nuclear Quantum Effects In Hydrogen Bonded Molecular Chains. (2020) (4)
Creation and annihilation of mobile fractional solitons in atomic chains (2021) (4)
Monte-Carlo simulation of diffusion in a two barriers system (2002) (4)
Interface dipoles of Ir(ppy)3 on Cu(111). (2019) (3)
Designer magnetic topological graphene nanoribbons (2022) (3)
Interplay between π-Conjugation and Exchange Magnetism in One-Dimensional Porphyrinoid Polymers (2022) (3)
Role of the Magnetic Anisotropy in Atomic-Spin Sensing of 1D Molecular Chains. (2022) (3)
Stable Au–C bonds to the substrate for fullerene-based nanostructures (2017) (3)
Thermally induced intra-molecular transformation and metalation of free-base porphyrin on Au(111) surface steered by surface confinement and ad-atoms (2020) (3)
Computational modeling of turbulent melt flow in CdZnTe crystal growth (2002) (3)
On-Surface Hydrogenation of Buckybowls: From Curved Aromatic Molecules to Planar Non-Kekulé Aromatic Hydrocarbons. (2020) (3)
Attomolar detection of hepatitis C virus core protein powered by molecular antenna-like effect in a graphene field-effect aptasensor. (2022) (3)
Simple device for the growth of micrometer-sized monocrystalline single-layer graphene on SiC(0001) (2018) (2)
Exploiting Cooperative Catalysis for the On‐Surface Synthesis of Linear Heteroaromatic Polymers via Selective C–H Activation (2021) (2)
On-Surface Synthesis of Square-Type Porphyrin Tetramers with Central Antiaromatic Cyclooctatetraene Moiety. (2022) (2)
Nature of Binding in Planar Halogen–Benzene Assemblies and Their Possible Visualization in Scanning Probe Microscopy (2018) (2)
On-surface synthesis of doubly-linked one-dimensional pentacene ladder polymers. (2020) (2)
On-surface synthesis of organocopper metallacycles through activation of inner diacetylene moieties (2021) (1)
Selective Activation of Aromatic C-H Bonds Catalyzed by Single Gold Atoms at Room Temperature. (2022) (1)
Supporting Online Material for Complex Patterning by Vertical Interchange Atom Manipulation Using Atomic Force Microscopy (2008) (1)
Cumulene-like bridged indeno[1,2-b]fluorene π-conjugated polymers synthesized on metal surfaces. (2021) (1)
Stability, interaction and influence of domain boundaries in Ge/Si(111)-5 × 5 (2012) (1)
Steering Large Magnetic Exchange Coupling in Nanographenes near the Closed-Shell to Open-Shell Transition. (2023) (1)
Imaging Charge Distribution Within Molecules by Scanning Probe Microscopy (2018) (1)
Single atom diffusion of Pb on a Si(1 1 1)-7 × 7 surface (2004) (1)
Publisher Correction: The effect of hydration number on the interfacial transport of sodium ions (2018) (1)
Basic Mechanisms for Single Atom Manipulation in Semiconductor Systems with the FM-AFM (2009) (1)
Non-adiabatic molecular dynamic simulations of opening reaction of molecular junctions (2016) (1)
Relation between chemical force and tunneling current in point contacts: a simple model (2010) (1)
Solid state surfaces and interfaces (2009) (1)
Intra-atomic charge re-organization at the Pb–Si interface: Bonding mechanism at low coverage (2009) (1)
Z3 Charge Density Wave of Silicon Atomic Chains on a Vicinal Silicon Surface (2022) (1)
Chiral Surface from Achiral Ingredients: Modification of Cu(110) with Phthalic Acid (2019) (1)
Atomic Scale Control and Visualization of Topological Quantum Phase Transition in π‐Conjugated Polymers Driven by Their Length (Adv. Mater. 44/2021) (2021) (1)
Study of uncertainties of height measurements of monoatomic steps on Si 5 × 5 using DFT (2017) (1)
Non-covalent control of spin-state in metal-organic complex by positioning on N-doped graphene (2018) (0)
Structure and electronic properties of end states of self-assembled 1D covalent molecular chains on Au(111) (2019) (0)
Chapter 4 Band Structure of Silicon Nanocrystals (2016) (0)
The Interplay of Conductance , Force , and Structure Change in Metallic Point Contacts (2014) (0)
Local charge accumulation at a trinuclear metal-organic nanostructure on a surface (2019) (0)
High Resolution Imaging of Organic Molecule by AFM at Room Temperature (2016) (0)
Proper carbon ID required (2011) (0)
Titelbild: Aromatic Azide Transformation on the Ag(111) Surface Studied by Scanning Probe Microscopy (Angew. Chem. 8/2019) (2019) (0)
Inside Back Cover: On‐Surface Synthesis of Ethynylene‐Bridged Anthracene Polymers (Angew. Chem. Int. Ed. 20/2019) (2019) (0)
Effect of interfaces on electron transport properties of MoS2--Au Contacts (2014) (0)
On-Surface Mechanochemistry Synthesis of Non-Alternant Non-Benzenoid Aromatic Compounds Containing 4 to 8-Membered Rings (2020) (0)
(Invited) On-Surface Synthesis of Acene Polymers (2022) (0)
Highly-Entangled Polyradical Nanographene with Coexisting Strong Correlation and Topological Frustration (2023) (0)
Quantum dissipation driven by electron transfer within a single molecule investigated with atomic force microscopy (2020) (0)
Hydrogen reactivity on Au-nanowires and the fractional conductance quantum (2005) (0)
Silicene vs. 2D ordered silicide: the atomic and electronic structure of the Si- ( √ 19 × √ 19) R 23 . 4 ◦ /Pt(111) (2014) (0)
29Si NMR Structure Analysis of Water Glass Samples (2001) (0)
Electronic band structure of 1D π-d hybridized narrow-gap metal-organic polymers. (2023) (0)
Interaction between adjacent twin Si 4 atom switches (2017) (0)
Chemicalidentification ofindividualsurface atomsby atomic force microscopy (2007) (0)
Mechanism of high-resolution STM, AFM and IETS-STM imaging with functionalized tips (2015) (0)
Tuning the Diradical Character of Pentacene Derivatives via Non-Benzenoid Coupling Motifs. (2023) (0)
Formation Heights of HINODE SOT/BFI Filters (2018) (0)
Chemical Identification of Single Atoms by Atomic Force Microscopy (2017) (0)
Innenrücktitelbild: On‐Surface Synthesis of Ethynylene‐Bridged Anthracene Polymers (Angew. Chem. 20/2019) (2019) (0)
Unusual Scaffold Rearrangement in Polyaromatic Hydrocarbons Driven by Concerted Action of Single Gold Atoms on a Gold Surface. (2022) (0)
Real-space imaging of {\sigma}-hole by means of Kelvin probe force microscopy with subatomic resolution (2021) (0)
On-surface Synthesis of [7]triangulene Quantum Ring via Antidot Engineering (2020) (0)
Single ion hydrates under the SPM tip (2019) (0)
Controlling Single Molecule Conductance by Chemical Reaction (2020) (0)
Preface: Phys. Status Solidi C 6/2012 (2012) (0)
Iron-based trinuclear metal-organic nanostructures on a surface with local charge accumulation (2018) (0)
Electronegativity Determination of Single Atoms by Atomic Force Microscopy (2017) (0)
Characterization of 2D-assembled overlayers based on p-aminophenol on Cu(110) (2016) (0)
Publisher Correction: Circumventing the stability problems of graphene nanoribbon zigzag edges. (2022) (0)
Resolving atomic-scale defects in conjugated polymers on-surfaces. (2022) (0)
High-resolution imaging of interfacial water by noncontact atomic force microscopy (2016) (0)
Comet P/2001 T3 (NEAT) (2001) (0)
Switching of Si Tetramer on Si(111)-(7x7) surface (2016) (0)
Absorption-site specific Kondo resonance observed in single molecule magnet TbPc 2 on Ag(111) (2018) (0)
Theoretical Challenges of Simultaneous nc-AFM/STM Experiments (2015) (0)
The effect of hydration number on the interfacial transport of sodium ions (2018) (0)
Weakly perturbative imaging of interfacial water with submolecular resolution by atomic force microscopy (2018) (0)
Oral TNT 2005 29 August-02 September , 2005 Oviedo-Spain HYDROGEN REACTIVITY ON AU SINGLE-ATOM CHAINS AND THE FRACTIONAL CONDUCTANCE QUANTUM (2005) (0)
On-surface synthesis of non-benzenoid conjugated polymers by selective atomic rearrangement of ethynylarenes (2022) (0)
Silicon Nanocrystals: Direct Bandgap Silicon: Tensile‐Strained Silicon Nanocrystals (Adv. Mater. Interfaces 2/2014) (2014) (0)
Electronegativity of Single Atoms Determined by Atomic Force Microscopy (2016) (0)
Oral presentations 17 Exploring structural and electronic properties of helical molecules on surfaces . (2017) (0)
Cover Picture: Aromatic Azide Transformation on the Ag(111) Surface Studied by Scanning Probe Microscopy (Angew. Chem. Int. Ed. 8/2019) (2019) (0)
On-surface azo-coupling reaction of p-aminophenol on Cu(110) (2016) (0)

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